Rh6CG057200

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
5780388 .. 5780789
402 bp
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UTR
Exon/CDS
Intron
Rh6CG057200.1

Sequence Viewer

Length: 402 bp
ATGCATTCCAGTTTGAGTTTCTGCAAAGAAGCATGCCTTGGTGACTGTTCTTGCCTTGTTCTATTCTTCGAAAACAATACTGCAAATGGAAGAATGCACATCCTTGTTATAGTGGTCATTTTGAACGTAACAATTTTGGTGTTAGTTGGCCAAGTTTCTTTTGGGTTCTTGTACTACCGCAAGAAGAAGAGATTACTGGACTACTCTGAAGAAATCAGGGAACAAGATGATTTCGTGGACAGTCTTTCCGGAATGCCTATTCGTTTCAGTTACAGCACTCTTAGCACAACAACTACAAATTTCTCCACAGCAAGTCAGGAGACATGTGGTGCTATTGAAGCATATCAAGTACAATCGTTCGATGATTCACATCTTGGAGCACTCCAAAGAGCTGATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

14.97

Weight (kDa)

5.02

Isoelectric Point (pI)

55.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 248
AciI CCGC 1 cut(s) 178
AcoI YGGCCR 1 cut(s) 148
AcsI RAATTY 1 cut(s) 298
AcuI CTGAAG 1 cut(s) 228
AfaI GTAC 2 cut(s) 173, 351
AflIII ACRYGT 1 cut(s) 323
AgsI TTSAA 2 cut(s) 124, 338
AjuI GAANNNNNNNTTGG 2 cut(s) 21, 53
AluBI AGCT 1 cut(s) 392
AluI AGCT 1 cut(s) 392
Alw21I GWGCWC 1 cut(s) 382
Alw26I GTCTC 1 cut(s) 314
Aor13HI TCCGGA 1 cut(s) 248
AoxI GGCC 1 cut(s) 148
ApoI RAATTY 1 cut(s) 298
AsuHPI GGTGA 1 cut(s) 53
AsuII TTCGAA 1 cut(s) 69
BalI TGGCCA 1 cut(s) 150
Bbv12I GWGCWC 1 cut(s) 382
BcoDI GTCTC 1 cut(s) 314
Bpu14I TTCGAA 1 cut(s) 69
BsaBI GATNNNNATC 1 cut(s) 369
BsaJI CCNNGG 1 cut(s) 37
BsaWI WCCGGW 1 cut(s) 248
Bse1I ACTGG 2 cut(s) 9, 201
Bse8I GATNNNNATC 1 cut(s) 369
BseAI TCCGGA 1 cut(s) 248
BseDI CCNNGG 1 cut(s) 37
BseGI GGATG 1 cut(s) 99
BseJI GATNNNNATC 1 cut(s) 369
BseNI ACTGG 2 cut(s) 9, 201
BshFI GGCC 1 cut(s) 150
BsiHKAI GWGCWC 1 cut(s) 382
BsiSI CCGG 1 cut(s) 249
BsmAI GTCTC 1 cut(s) 314
BsmI GAATGC 3 cut(s) 4, 99, 258
BsnI GGCC 1 cut(s) 150
Bsp119I TTCGAA 1 cut(s) 69
Bsp1286I GDGCHC 1 cut(s) 382
Bsp13I TCCGGA 1 cut(s) 248
BspACI CCGC 1 cut(s) 178
BspANI GGCC 1 cut(s) 150
BspEI TCCGGA 1 cut(s) 248
BspT104I TTCGAA 1 cut(s) 69
BsrI ACTGG 2 cut(s) 9, 201
BssECI CCNNGG 1 cut(s) 37
BssT1I CCWWGG 1 cut(s) 37
Bst4CI ACNGT 2 cut(s) 47, 242
Bst6I CTCTTC 1 cut(s) 182
BstBI TTCGAA 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 34
BstDEI CTNAG 1 cut(s) 281
BstF5I GGATG 1 cut(s) 99
BstMAI GTCTC 1 cut(s) 314
BstMWI GCNNNNNNNGC 2 cut(s) 282, 338
BstNSI RCATGY 2 cut(s) 36, 327
BsuRI GGCC 1 cut(s) 150
BtsCI GGATG 1 cut(s) 99
Cac8I GCNNGC 1 cut(s) 34
Csp6I GTAC 2 cut(s) 172, 350
CviAII CATG 2 cut(s) 33, 324
CviJI RGCY 2 cut(s) 150, 392
CviKI_1 RGCY 2 cut(s) 150, 392
CviQI GTAC 2 cut(s) 172, 350
DdeI CTNAG 1 cut(s) 281
EaeI YGGCCR 1 cut(s) 148
Eam1104I CTCTTC 1 cut(s) 182
EarI CTCTTC 1 cut(s) 182
Eco130I CCWWGG 1 cut(s) 37
Eco57I CTGAAG 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 37
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 37
FaeI CATG 2 cut(s) 36, 327
FaiI YATR 4 cut(s) 34, 110, 325, 343
FalI AAGNNNNNCTT 2 cut(s) 21, 53
FatI CATG 2 cut(s) 32, 323
FokI GGATG 1 cut(s) 86
HaeIII GGCC 1 cut(s) 150
HapII CCGG 1 cut(s) 249
Hin1II CATG 2 cut(s) 36, 327
HinfI GANTC 1 cut(s) 365
HpaII CCGG 1 cut(s) 249
HphI GGTGA 1 cut(s) 53
Hpy166II GTNNAC 1 cut(s) 238
Hpy188I TCNGA 1 cut(s) 208
Hpy188III TCNNGA 2 cut(s) 249, 317
Hpy8I GTNNAC 1 cut(s) 238
HpyCH4III ACNGT 2 cut(s) 47, 242
HpyCH4IV ACGT 1 cut(s) 126
HpyCH4V TGCA 4 cut(s) 4, 24, 83, 97
HpyF10VI GCNNNNNNNGC 2 cut(s) 282, 338
HpyF3I CTNAG 1 cut(s) 281
HpySE526I ACGT 1 cut(s) 126
Hsp92II CATG 2 cut(s) 36, 327
Kpn2I TCCGGA 1 cut(s) 248
LmnI GCTCC 1 cut(s) 377
LpnPI CCDG 5 cut(s) 22, 182, 202, 262, 302
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 3 cut(s) 41, 127, 269
MboII GAAGA 5 cut(s) 58, 102, 196, 199, 221
MhlI GDGCHC 1 cut(s) 382
MlsI TGGCCA 1 cut(s) 150
MluCI AATT 2 cut(s) 132, 298
MluNI TGGCCA 1 cut(s) 150
Mox20I TGGCCA 1 cut(s) 150
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 248
MscI TGGCCA 1 cut(s) 150
Msp20I TGGCCA 1 cut(s) 150
MspI CCGG 1 cut(s) 249
Mva1269I GAATGC 3 cut(s) 4, 99, 258
MwoI GCNNNNNNNGC 2 cut(s) 282, 338
NlaIII CATG 2 cut(s) 36, 327
NmuCI GTSAC 1 cut(s) 41
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 36, 327
NspV TTCGAA 1 cut(s) 69
PaeI GCATGC 1 cut(s) 36
PciI ACATGT 1 cut(s) 323
PctI GAATGC 3 cut(s) 4, 99, 258
PfeI GAWTC 1 cut(s) 365
PscI ACATGT 1 cut(s) 323
RsaI GTAC 2 cut(s) 173, 351
RsaNI GTAC 2 cut(s) 172, 350
SduI GDGCHC 1 cut(s) 382
SetI ASST 2 cut(s) 129, 394
SfuI TTCGAA 1 cut(s) 69
SphI GCATGC 1 cut(s) 36
Sse9I AATT 2 cut(s) 132, 298
SsiI CCGC 1 cut(s) 178
StyI CCWWGG 1 cut(s) 37
TaaI ACNGT 2 cut(s) 47, 242
TaiI ACGT 1 cut(s) 129
TaqI TCGA 2 cut(s) 69, 360
TasI AATT 2 cut(s) 132, 298
TatI WGTACW 2 cut(s) 171, 349
TfiI GAWTC 1 cut(s) 365
TseFI GTSAC 1 cut(s) 41
Tsp45I GTSAC 1 cut(s) 41
XapI RAATTY 1 cut(s) 298
XceI RCATGY 2 cut(s) 36, 327
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.