Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003347.1

Orthogroup ID

OG0003682

Physical Location & Seq

Genomic Coordinates Reverse (-)

123415 .. 125975

Gene Structure 2561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003347.1_g000019.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

atgtcataccattggttggatcctggggatcctaacaactggtatcagagcccgcaactgggcctttctccggcgggttacggcggtgggatctccggcgggtattacagcacttcttatcatccttatggtagctcttcttgtgcgtttacccaattctcatcgcaaccaaacccttatccaccattgcaactcaacccttcggccaccatcatcagtggtcacctgttccctcatcaatttccatgtgttgctcagcagcctctcaccaccactcctcgcgacccatacatccctacttactattcacctcattctgacccaaatccctggatttacccatcgatttcacaacttcattcctatgacccatcagttatcggtgttcattctcagttcatcttcaccaaagccatgaccacaccacatatttaccattatgctccttcaattccaacctttcagtcacccttagtccccacttttgtgccccaactcccaattacagatcccaaacctctttctctgaatcacaagtcgtttcggcattccagacatagagtcgccatggcggcgaaagcgagagttgccaaaaagacccgaaacccatatatactccatggtgtgggtaagtactcgaggtccaagatgtaccacaagcgcagtctcttcccacgtcacaactccaaggtggcagttgagattatggaggagcttggtcagctagttcgaaactctaccgactgctggaaacacttcatcgttttcattttcggcaacggaacccacgccactcctatacaagctttagctgcttcatctcttcctccatcaattgacttgcaagaatcgattgggtctcagctcactggggttcatgaccatcatccattgaaaaaaaagtgtgatgacagtggaggattgaaaaccttgaatagtcaatttgaggtaattgtttctccatttgataattgtcacctgttgagagcagtatctactttgctattgcagaagaaggaccatcgcaatcatctttcacaggatgtcttggatcataatagtgcattcaatatagttggctataatccttttttgaattttgagtgtggaccgataaattcggcttattggcatatgagtttgcctctggctgcttggcttgagaaaattcaaaggaatgcagacatgggtttatttggaaattggggggcactaaaaacctatatgattgttaaaactttagcaaatgtgttttgtgacatcaagttaaacatgcacttcttgaagtctaaggagcaagataagcagtgtttcaaagatgtagtttttggtctgaaattatcaatgtcatctgtgacttcagatttgttggcattcgaatcatgtatgagtgggaacatgtctatggaaaaagcaatgatggcaatttctcattcaaccactgtcctgaaagttgtcattgcaaccgattgtcgacagcttaccaattttgttgcccaaatcaataatgaccaattttgcttggatccttcattgatggttgccgctgtccaggatttttgtactcttacatgtaagaatgagcctatatgtgttttgagttacaatgagaagacaattgttactgttcctcaagtgttcatgcaaatgtcaaagtctgatgggttattccactattcaagggtgccagggacctttgtacatgactacttgagaaagtttattgatgaaattatcaatgcctggatcacagactcagtgctggttcagaccgatgatagggactccgtcaatttgcttcttaaacatattgtgactgcaattgtgaaaaatggtcataatgcagaatttgctatcactcaactttctttggtggaatatgcaaagcaaagtacggttttgaaacatctatccaatcttgacacttttctgcatgtcccagctaaatatggtaatagcttgaaatttactttgtcactgataattgccttgattgaattattgagttgtggatatgttgagaaaaatacaagatggtttaccaaaatcttagtgactagtattaatagtggatgcttggatctgcaccatgatcaggggcttatttcttgtggcattgaattcaatagtttcttggtgaatagaaatgatggatacgtggttgttctatgttccaacatgttcagagatgggtttaatttggagtacttgtgggagacaaaagaatacagggatttgcttatgctggctcaccctctgcatgtgaagcttcttaagaatgatgtactgatttcgaatcatttctatgtgtttgtaaaggagttggagaaagcacctggtattttgcttatgttgctcaaaattacggcagatattagagaacagattgagcttcttcatgggcaagcgaaaagggcaaagttgtatattgaccttaaagaggtgaaaaggagaaaagagcttctggtattgatggggagcaagaatgagaggaacaagcattcgtgttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002237 GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009610 GO:0009617 GO:0009620 GO:0009877 GO:0009987 GO:0010033 GO:0010941 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0036377 GO:0042221 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

836

Amino Acids

94.46

Weight (kDa)

8.68

Isoelectric Point (pI)

46.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003682)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12421 FvH4_3g20453 FvH4_3g20454
malus_domestica	MD16G1253500.v1.1
rosa_chinensis	RchiOBHm_Chr3g0479611 RchiOBHm_Chr4g0393431 RchiOBHm_Chr4g0403131 RchiOBHm_Chr4g0403161 RchiOBHm_Chr4g0419441 RchiOBHm_Chr5g0007271 RchiOBHm_Chr5g0056401
rosa_multiflora	Rmu_sc0000577.1_g000014 Rmu_sc0001218.1_g000016 Rmu_sc0001787.1_g000002 Rmu_sc0001877.1_g000005 Rmu_sc0002396.1_g000007 Rmu_sc0002522.1_g000025 Rmu_sc0002699.1_g000023 Rmu_sc0002822.1_g000015 Rmu_sc0002822.1_g000017 Rmu_sc0003347.1_g000019 Rmu_sc0004174.1_g000005 Rmu_sc0004874.1_g000013 Rmu_sc0009422.1_g000002 Rmu_sc0017595.1_g000001 Rmu_sc0032285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033040 Rroxscaffold_2G00106480 Rroxscaffold_3G00267930 Rroxscaffold_4G00326640 Rroxscaffold_5G00382820 Rroxscaffold_6G00403290 Rroxscaffold_7G00191420
rosa_samantha	Rh2AG247000 Rh6CG057200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1684
AccB7I	CCANNNNNTGG	2 cut(s)	16, 625
AccI	GTMKAC	1 cut(s)	1474
AccII	CGCG	1 cut(s)	282
AciI	CCGC	6 cut(s)	53, 74, 84, 99, 572, 1545
AcoI	YGGCCR	1 cut(s)	204
AcsI	RAATTY	6 cut(s)	1096, 1117, 1167, 1847, 1964, 2120
AcuI	CTGAAG	1 cut(s)	1344
AfaI	GTAC	7 cut(s)	635, 653, 1564, 1701, 1894, 2207, 2286
AfiI	CCNNNNNNNGG	9 cut(s)	16, 58, 59, 70, 625, 747, 1779, 2095, 2440
AflII	CTTAAG	1 cut(s)	2273
AflIII	ACRYGT	3 cut(s)	1398, 1571, 2178
AhdI	GACNNNNNGTC	1 cut(s)	560
AhlI	ACTAGT	1 cut(s)	2057
AjiI	CACGTC	1 cut(s)	677
AjnI	CCWGG	6 cut(s)	22, 329, 1551, 1687, 1742, 2335
AleI	CACNNNNGTG	1 cut(s)	485
Alw26I	GTCTC	3 cut(s)	671, 864, 2210
Ama87I	CYCGRG	1 cut(s)	637
AoxI	GGCC	2 cut(s)	61, 204
ApeKI	GCWGC	3 cut(s)	259, 812, 1151
ApoI	RAATTY	6 cut(s)	1096, 1117, 1167, 1847, 1964, 2120
ArsI	GACNNNNNNTTYG	2 cut(s)	1348, 1380
AseI	ATTAAT	1 cut(s)	2064
Asp700I	GAANNNNTTC	2 cut(s)	755, 2300
AspLEI	GCGC	1 cut(s)	663
AspS9I	GGNCC	5 cut(s)	61, 642, 1018, 1109, 1692
AsuHPI	GGTGA	9 cut(s)	215, 259, 300, 397, 459, 968, 2149, 2243, 2455
AsuII	TTCGAA	3 cut(s)	730, 1377, 2294
AvaI	CYCGRG	1 cut(s)	637
AvaII	GGWCC	4 cut(s)	642, 1018, 1109, 1692
BaeGI	GKGCMC	2 cut(s)	492, 1213
BamHI	GGATCC	3 cut(s)	19, 28, 1525
BanI	GGYRCC	1 cut(s)	1684
BanII	GRGCYC	1 cut(s)	53
BbsI	GAAGAC	1 cut(s)	1619
BbvI	GCAGC	3 cut(s)	271, 799, 1138
BceAI	ACGGC	2 cut(s)	97, 2382
BciT130I	CCWGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
BciVI	GTATCC	1 cut(s)	2147
BclI	TGATCA	1 cut(s)	2092
BcoDI	GTCTC	3 cut(s)	671, 864, 2210
BcuI	ACTAGT	1 cut(s)	2057
BfaI	CTAG	2 cut(s)	725, 2058
BfrI	CTTAAG	1 cut(s)	2273
BfuI	GTATCC	1 cut(s)	2147
BglI	GCCNNNNNGGC	1 cut(s)	572
BisI	GCNGC	5 cut(s)	260, 573, 813, 1152, 1545
BlpI	GCTNAGC	1 cut(s)	255
BlsI	GCNGC	5 cut(s)	261, 574, 814, 1153, 1546
BmcAI	AGTACT	2 cut(s)	635, 2207
Bme1390I	CCNGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
Bme18I	GGWCC	4 cut(s)	642, 1018, 1109, 1692
BmeRI	GACNNNNNGTC	1 cut(s)	560
BmeT110I	CYCGRG	1 cut(s)	637
BmgBI	CACGTC	1 cut(s)	677
BmgT120I	GGNCC	5 cut(s)	61, 642, 1018, 1109, 1692
BmiI	GGNNCC	6 cut(s)	21, 30, 784, 1527, 1686, 1693
BmrFI	CCNGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
BmrI	ACTGGG	2 cut(s)	68, 879
BmsI	GCATC	1 cut(s)	2063
BmuI	ACTGGG	2 cut(s)	68, 879
BpiI	GAAGAC	1 cut(s)	1619
BplI	GAGNNNNNCTC	2 cut(s)	1129, 1161
Bpu1102I	GCTNAGC	1 cut(s)	255
Bpu14I	TTCGAA	3 cut(s)	730, 1377, 2294
BpuEI	CTTGAG	3 cut(s)	1181, 1617, 1732
Bsa29I	ATCGAT	2 cut(s)	344, 851
BsaAI	YACGTR	1 cut(s)	2158
BsaI	GGTCTC	1 cut(s)	864
BsaJI	CCNNGG	6 cut(s)	23, 329, 567, 619, 687, 1688
BsaXI	ACNNNNNCTCC	4 cut(s)	259, 289, 2195, 2225
Bsc4I	CCNNNNNNNGG	9 cut(s)	16, 58, 59, 70, 625, 747, 1779, 2095, 2440
Bse1I	ACTGG	3 cut(s)	44, 63, 874
Bse3DI	GCAATG	3 cut(s)	185, 1422, 1458
BseBI	CCWGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
BseCI	ATCGAT	2 cut(s)	344, 851
BseDI	CCNNGG	6 cut(s)	23, 329, 567, 619, 687, 1688
BseGI	GGATG	5 cut(s)	121, 291, 886, 1048, 2078
BseLI	CCNNNNNNNGG	9 cut(s)	16, 58, 59, 70, 625, 747, 1779, 2095, 2440
BseMI	GCAATG	3 cut(s)	185, 1422, 1458
BseMII	CTCAG	4 cut(s)	269, 407, 875, 1770
BseNI	ACTGG	3 cut(s)	44, 63, 874
BseRI	GAGGAG	2 cut(s)	267, 725
BseSI	GKGCMC	2 cut(s)	492, 1213
BseXI	GCAGC	3 cut(s)	271, 799, 1138
BseYI	CCCAGC	1 cut(s)	1939
BsgI	GTGCAG	1 cut(s)	2069
Bsh1236I	CGCG	1 cut(s)	282
BshFI	GGCC	2 cut(s)	63, 206
BshNI	GGYRCC	1 cut(s)	1684
BshVI	ATCGAT	2 cut(s)	344, 851
BsiHKCI	CYCGRG	1 cut(s)	637
BsiSI	CCGG	2 cut(s)	71, 96
BslFI	GGGAC	4 cut(s)	461, 1705, 1796, 1922
BslI	CCNNNNNNNGG	9 cut(s)	16, 58, 59, 70, 625, 747, 1779, 2095, 2440
BsmAI	GTCTC	3 cut(s)	671, 864, 2210
BsmFI	GGGAC	4 cut(s)	461, 1705, 1796, 1922
BsmI	GAATGC	5 cut(s)	547, 1064, 1183, 1373, 2500
BsnI	GGCC	2 cut(s)	63, 206
Bso31I	GGTCTC	1 cut(s)	864
BsoBI	CYCGRG	1 cut(s)	637
Bsp119I	TTCGAA	3 cut(s)	730, 1377, 2294
Bsp1286I	GDGCHC	3 cut(s)	53, 492, 1213
Bsp1407I	TGTACA	1 cut(s)	1699
Bsp143I	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
Bsp1720I	GCTNAGC	1 cut(s)	255
Bsp19I	CCATGG	2 cut(s)	567, 619
Bsp68I	TCGCGA	1 cut(s)	282
BspACI	CCGC	6 cut(s)	53, 74, 84, 99, 572, 1545
BspANI	GGCC	2 cut(s)	63, 206
BspCNI	CTCAG	4 cut(s)	268, 406, 874, 1769
BspDI	ATCGAT	2 cut(s)	344, 851
BspFNI	CGCG	1 cut(s)	282
BspHI	TCATGA	1 cut(s)	877
BspLI	GGNNCC	6 cut(s)	21, 30, 784, 1527, 1686, 1693
BspQI	GCTCTTC	1 cut(s)	142
BspT104I	TTCGAA	3 cut(s)	730, 1377, 2294
BspT107I	GGYRCC	1 cut(s)	1684
BspTI	CTTAAG	1 cut(s)	2273
BspTNI	GGTCTC	1 cut(s)	864
BsrDI	GCAATG	3 cut(s)	185, 1422, 1458
BsrGI	TGTACA	1 cut(s)	1699
BsrI	ACTGG	3 cut(s)	44, 63, 874
BssECI	CCNNGG	6 cut(s)	23, 329, 567, 619, 687, 1688
BssMI	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
BssT1I	CCWWGG	3 cut(s)	567, 619, 687
Bst2UI	CCWGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
Bst4CI	ACNGT	4 cut(s)	914, 1444, 1627, 1897
Bst6I	CTCTTC	3 cut(s)	142, 674, 828
BstAFI	CTTAAG	1 cut(s)	2273
BstAPI	GCANNNNNTGC	1 cut(s)	1850
BstAUI	TGTACA	1 cut(s)	1699
BstBAI	YACGTR	1 cut(s)	2158
BstBI	TTCGAA	3 cut(s)	730, 1377, 2294
BstC8I	GCNNGC	3 cut(s)	53, 2247, 2406
BstDEI	CTNAG	7 cut(s)	255, 393, 472, 861, 1290, 1756, 2050
BstDSI	CCRYGG	2 cut(s)	567, 619
BstEII	GGTNACC	1 cut(s)	221
BstENI	CCTNNNNNAGG	1 cut(s)	2438
BstF5I	GGATG	5 cut(s)	121, 291, 886, 1048, 2078
BstFNI	CGCG	1 cut(s)	282
BstHHI	GCGC	1 cut(s)	663
BstKTI	GATC	9 cut(s)	22, 31, 93, 511, 1054, 1528, 1749, 2083, 2095
BstMAI	GTCTC	3 cut(s)	671, 864, 2210
BstMBI	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
BstNI	CCWGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
BstNSI	RCATGY	6 cut(s)	1276, 1402, 1575, 1937, 2182, 2264
BstPI	GGTNACC	1 cut(s)	221
BstSCI	CCNGG	6 cut(s)	22, 329, 1551, 1687, 1742, 2335
BstSLI	GKGCMC	2 cut(s)	492, 1213
BstUI	CGCG	1 cut(s)	282
BstV1I	GCAGC	3 cut(s)	271, 799, 1138
BstV2I	GAAGAC	1 cut(s)	1619
BstX2I	RGATCY	6 cut(s)	19, 28, 90, 508, 1525, 2080
BstXI	CCANNNNNNTGG	1 cut(s)	330
BstYI	RGATCY	6 cut(s)	19, 28, 90, 508, 1525, 2080
Bsu15I	ATCGAT	2 cut(s)	344, 851
BsuI	GTATCC	1 cut(s)	2147
BsuRI	GGCC	2 cut(s)	63, 206
BsuTUI	ATCGAT	2 cut(s)	344, 851
BtgI	CCRYGG	2 cut(s)	567, 619
BtgZI	GCGATG	2 cut(s)	147, 1007
BtrI	CACGTC	1 cut(s)	677
BtsCI	GGATG	5 cut(s)	121, 291, 886, 1048, 2078
BtsI	GCAGTG	1 cut(s)	1313
BtsIMutI	CAGTG	7 cut(s)	223, 867, 919, 1313, 1440, 1764, 1976
BtuMI	TCGCGA	1 cut(s)	282
Cac8I	GCNNGC	3 cut(s)	53, 2247, 2406
CciI	TCATGA	1 cut(s)	877
CfoI	GCGC	1 cut(s)	663
Cfr13I	GGNCC	5 cut(s)	61, 642, 1018, 1109, 1692
ClaI	ATCGAT	2 cut(s)	344, 851
CsiI	ACCWGGT	1 cut(s)	2335
Csp6I	GTAC	7 cut(s)	634, 652, 1563, 1700, 1893, 2206, 2285
CviQI	GTAC	7 cut(s)	634, 652, 1563, 1700, 1893, 2206, 2285
DdeI	CTNAG	7 cut(s)	255, 393, 472, 861, 1290, 1756, 2050
DpnI	GATC	9 cut(s)	21, 30, 92, 510, 1053, 1527, 1748, 2082, 2094
DpnII	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
DriI	GACNNNNNGTC	1 cut(s)	560
EaeI	YGGCCR	1 cut(s)	204
Eam1104I	CTCTTC	3 cut(s)	142, 674, 828
Eam1105I	GACNNNNNGTC	1 cut(s)	560
EarI	CTCTTC	3 cut(s)	142, 674, 828
Eco130I	CCWWGG	3 cut(s)	567, 619, 687
Eco24I	GRGCYC	1 cut(s)	53
Eco31I	GGTCTC	1 cut(s)	864
Eco47I	GGWCC	4 cut(s)	642, 1018, 1109, 1692
Eco57I	CTGAAG	1 cut(s)	1344
Eco88I	CYCGRG	1 cut(s)	637
Eco91I	GGTNACC	1 cut(s)	221
EcoNI	CCTNNNNNAGG	1 cut(s)	2438
EcoO109I	RGGNCCY	1 cut(s)	1692
EcoO65I	GGTNACC	1 cut(s)	221
EcoRI	GAATTC	1 cut(s)	2120
EcoRII	CCWGG	6 cut(s)	22, 329, 1551, 1687, 1742, 2335
EcoT14I	CCWWGG	3 cut(s)	567, 619, 687
EcoT38I	GRGCYC	1 cut(s)	53
ErhI	CCWWGG	3 cut(s)	567, 619, 687
FaqI	GGGAC	4 cut(s)	461, 1705, 1796, 1922
FauI	CCCGC	3 cut(s)	60, 67, 92
FauNDI	CATATG	1 cut(s)	1134
FbaI	TGATCA	1 cut(s)	2092
FblI	GTMKAC	1 cut(s)	1474
Fnu4HI	GCNGC	5 cut(s)	260, 573, 813, 1152, 1545
FokI	GGATG	5 cut(s)	108, 278, 873, 1055, 2085
FriOI	GRGCYC	1 cut(s)	53
Fsp4HI	GCNGC	5 cut(s)	260, 573, 813, 1152, 1545
FspBI	CTAG	2 cut(s)	725, 2058
GlaI	GCGC	1 cut(s)	662
GluI	GCNGC	5 cut(s)	260, 573, 813, 1152, 1545
GsaI	CCCAGC	1 cut(s)	1943
HaeIII	GGCC	2 cut(s)	63, 206
HapII	CCGG	2 cut(s)	71, 96
HhaI	GCGC	1 cut(s)	663
Hin6I	GCGC	1 cut(s)	661
HinP1I	GCGC	1 cut(s)	661
HincII	GTYRAC	1 cut(s)	1475
HindII	GTYRAC	1 cut(s)	1475
HindIII	AAGCTT	2 cut(s)	804, 2267
HinfI	GANTC	7 cut(s)	529, 561, 848, 1379, 1754, 1784, 2296
HpaII	CCGG	2 cut(s)	71, 96
HphI	GGTGA	9 cut(s)	215, 259, 300, 397, 459, 968, 2149, 2243, 2455
Hpy166II	GTNNAC	4 cut(s)	150, 1109, 1475, 2040
Hpy188I	TCNGA	8 cut(s)	48, 319, 528, 1335, 1363, 1660, 1770, 2186
Hpy188III	TCNNGA	6 cut(s)	281, 552, 878, 1282, 1447, 1919
Hpy8I	GTNNAC	4 cut(s)	150, 1109, 1475, 2040
HpyAV	CCTTC	4 cut(s)	210, 456, 1009, 1539
HpyCH4III	ACNGT	4 cut(s)	914, 1444, 1627, 1897
HpyCH4IV	ACGT	2 cut(s)	676, 2157
HpyF3I	CTNAG	7 cut(s)	255, 393, 472, 861, 1290, 1756, 2050
HpySE526I	ACGT	2 cut(s)	676, 2157
HspAI	GCGC	1 cut(s)	661
Ksp22I	TGATCA	1 cut(s)	2092
Kzo9I	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
LguI	GCTCTTC	1 cut(s)	142
LmnI	GCTCC	4 cut(s)	448, 712, 1294, 2478
Lsp1109I	GCAGC	3 cut(s)	271, 799, 1138
LweI	GCATC	1 cut(s)	2063
MabI	ACCWGGT	1 cut(s)	2335
MaeI	CTAG	2 cut(s)	725, 2058
MaeII	ACGT	2 cut(s)	676, 2157
MalI	GATC	9 cut(s)	21, 30, 92, 510, 1053, 1527, 1748, 2082, 2094
MboI	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
MboII	GAAGA	7 cut(s)	129, 394, 661, 815, 1024, 1624, 2387
MfeI	CAATTG	3 cut(s)	834, 1617, 1821
MflI	RGATCY	6 cut(s)	19, 28, 90, 508, 1525, 2080
MhlI	GDGCHC	3 cut(s)	53, 492, 1213
MlyI	GAGTC	3 cut(s)	570, 1748, 1778
MmeI	TCCRAC	3 cut(s)	479, 2199, 2304
MroXI	GAANNNNTTC	2 cut(s)	755, 2300
MseI	TTAA	7 cut(s)	1233, 1268, 1803, 2064, 2196, 2274, 2436
MslI	CAYNNNNRTG	7 cut(s)	126, 363, 485, 1059, 1403, 1646, 2304
MspA1I	CMGCKG	1 cut(s)	1547
MspCI	CTTAAG	1 cut(s)	2273
MspI	CCGG	2 cut(s)	71, 96
MspR9I	CCNGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
MunI	CAATTG	3 cut(s)	834, 1617, 1821
Mva1269I	GAATGC	5 cut(s)	547, 1064, 1183, 1373, 2500
MvaI	CCWGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
MvnI	CGCG	1 cut(s)	282
NcoI	CCATGG	2 cut(s)	567, 619
NdeI	CATATG	1 cut(s)	1134
NdeII	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
NlaIV	GGNNCC	6 cut(s)	21, 30, 784, 1527, 1686, 1693
NmuCI	GTSAC	9 cut(s)	221, 465, 677, 974, 1256, 1354, 1813, 1974, 2053
NruI	TCGCGA	1 cut(s)	282
NspI	RCATGY	6 cut(s)	1276, 1402, 1575, 1937, 2182, 2264
NspV	TTCGAA	3 cut(s)	730, 1377, 2294
OliI	CACNNNNGTG	1 cut(s)	485
PaeR7I	CTCGAG	1 cut(s)	637
PagI	TCATGA	1 cut(s)	877
PciI	ACATGT	3 cut(s)	1398, 1571, 2178
PciSI	GCTCTTC	1 cut(s)	142
PctI	GAATGC	5 cut(s)	547, 1064, 1183, 1373, 2500
PdmI	GAANNNNTTC	2 cut(s)	755, 2300
PfeI	GAWTC	4 cut(s)	529, 848, 1379, 2296
PflFI	GACNNNGTC	1 cut(s)	1787
PflMI	CCANNNNNTGG	2 cut(s)	16, 625
PfoI	TCCNGGA	1 cut(s)	1551
PkrI	GCNGC	5 cut(s)	261, 574, 814, 1153, 1546
PleI	GAGTC	3 cut(s)	569, 1748, 1778
PpsI	GAGTC	3 cut(s)	569, 1748, 1778
Ppu21I	YACGTR	1 cut(s)	2158
PpuMI	RGGWCCY	1 cut(s)	1692
PscI	ACATGT	3 cut(s)	1398, 1571, 2178
PshBI	ATTAAT	1 cut(s)	2064
Psp5II	RGGWCCY	1 cut(s)	1692
Psp6I	CCWGG	6 cut(s)	22, 329, 1551, 1687, 1742, 2335
PspEI	GGTNACC	1 cut(s)	221
PspFI	CCCAGC	1 cut(s)	1939
PspGI	CCWGG	6 cut(s)	22, 329, 1551, 1687, 1742, 2335
PspN4I	GGNNCC	6 cut(s)	21, 30, 784, 1527, 1686, 1693
PspPI	GGNCC	5 cut(s)	61, 642, 1018, 1109, 1692
PspPPI	RGGWCCY	1 cut(s)	1692
PspXI	VCTCGAGB	1 cut(s)	637
PsuI	RGATCY	6 cut(s)	19, 28, 90, 508, 1525, 2080
PsyI	GACNNNGTC	1 cut(s)	1787
RruI	TCGCGA	1 cut(s)	282
RsaI	GTAC	7 cut(s)	635, 653, 1564, 1701, 1894, 2207, 2286
RsaNI	GTAC	7 cut(s)	634, 652, 1563, 1700, 1893, 2206, 2285
RseI	CAYNNNNRTG	7 cut(s)	126, 363, 485, 1059, 1403, 1646, 2304
SalI	GTCGAC	1 cut(s)	1473
SapI	GCTCTTC	1 cut(s)	142
SaqAI	TTAA	7 cut(s)	1233, 1268, 1803, 2064, 2196, 2274, 2436
SatI	GCNGC	5 cut(s)	260, 573, 813, 1152, 1545
Sau3AI	GATC	9 cut(s)	19, 28, 90, 508, 1051, 1525, 1746, 2080, 2092
Sau96I	GGNCC	5 cut(s)	61, 642, 1018, 1109, 1692
ScaI	AGTACT	2 cut(s)	635, 2207
SchI	GAGTC	3 cut(s)	570, 1748, 1778
ScrFI	CCNGG	6 cut(s)	24, 331, 1553, 1689, 1744, 2337
SduI	GDGCHC	3 cut(s)	53, 492, 1213
SexAI	ACCWGGT	1 cut(s)	2335
SfaNI	GCATC	1 cut(s)	2063
Sfr274I	CTCGAG	1 cut(s)	637
SfuI	TTCGAA	3 cut(s)	730, 1377, 2294
SinI	GGWCC	4 cut(s)	642, 1018, 1109, 1692
SlaI	CTCGAG	1 cut(s)	637
SmiMI	CAYNNNNRTG	7 cut(s)	126, 363, 485, 1059, 1403, 1646, 2304
SmlI	CTYRAG	5 cut(s)	637, 1160, 1632, 1711, 2273
SmoI	CTYRAG	5 cut(s)	637, 1160, 1632, 1711, 2273
SpeI	ACTAGT	1 cut(s)	2057
SsiI	CCGC	6 cut(s)	53, 74, 84, 99, 572, 1545
SspMI	CTAG	2 cut(s)	725, 2058
StyD4I	CCNGG	6 cut(s)	22, 329, 1551, 1687, 1742, 2335
StyI	CCWWGG	3 cut(s)	567, 619, 687
TaaI	ACNGT	4 cut(s)	914, 1444, 1627, 1897
TaiI	ACGT	2 cut(s)	679, 2160
TaqI	TCGA	7 cut(s)	344, 638, 730, 851, 1377, 1474, 2294
TaqII	GACCGA	2 cut(s)	1126, 1787
TatI	WGTACW	5 cut(s)	633, 1562, 1699, 2205, 2284
TauI	GCSGC	2 cut(s)	575, 1547
TfiI	GAWTC	4 cut(s)	529, 848, 1379, 2296
Tru1I	TTAA	7 cut(s)	1233, 1268, 1803, 2064, 2196, 2274, 2436
Tru9I	TTAA	7 cut(s)	1233, 1268, 1803, 2064, 2196, 2274, 2436
TscAI	CASTG	7 cut(s)	223, 874, 919, 1313, 1447, 1764, 1983
TseFI	GTSAC	9 cut(s)	221, 465, 677, 974, 1256, 1354, 1813, 1974, 2053
TseI	GCWGC	3 cut(s)	259, 812, 1151
Tsp45I	GTSAC	9 cut(s)	221, 465, 677, 974, 1256, 1354, 1813, 1974, 2053
TspGWI	ACGGA	2 cut(s)	795, 1777
TspRI	CASTG	7 cut(s)	223, 874, 919, 1313, 1447, 1764, 1983
Tth111I	GACNNNGTC	1 cut(s)	1787
Van91I	CCANNNNNTGG	2 cut(s)	16, 625
Vha464I	CTTAAG	1 cut(s)	2273
VpaK11BI	GGWCC	4 cut(s)	642, 1018, 1109, 1692
VspI	ATTAAT	1 cut(s)	2064
XagI	CCTNNNNNAGG	1 cut(s)	2438
XapI	RAATTY	6 cut(s)	1096, 1117, 1167, 1847, 1964, 2120
XceI	RCATGY	6 cut(s)	1276, 1402, 1575, 1937, 2182, 2264
XhoI	CTCGAG	1 cut(s)	637
XmiI	GTMKAC	1 cut(s)	1474
XmnI	GAANNNNTTC	2 cut(s)	755, 2300
XspI	CTAG	2 cut(s)	725, 2058
ZrmI	AGTACT	2 cut(s)	635, 2207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.