Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004874.1

Orthogroup ID

OG0003682

Physical Location & Seq

Genomic Coordinates Forward (+)

63976 .. 66240

Gene Structure 2265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004874.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

atgtcataccattggttggatcctggggatcctaacaactggtatcagagcccgcaactgggcctttctcaggcgggttacggcggtgggatctccggcgggtattatagcacttcttatcatccttatggtagctcttcttgtgcgtttacccaattctcatcgcaaccaaacccttacccaccattgcaactcaacccttcggccaccatcatcagtggtcacctgttccctcatcaatttccatgtgttgctcagcagcctctcaccaccactcctcgcgacccatacatccctacttactattcacctcattctgacccaaatccctggatttacccatcgatttcacaacttcattcctacgacccatcagttaccggtgttcattctcagttcatcttcaccaaagccatgaccacaccacctatttaccattctgctccttcaattccaacctttcagtcacccttagtccccacttttgtgccccaactcccaattatagatcccaaacctctttctctgaatcacaagtcatttcggcattccagacatagagtcgccatggcggcgaaagcgagagttgccaaaaagacccgaaacccatatatactccatggtgtgggtaagtactcgaggtccaagatgtaccacaagcgcagtctcttcccacgtcacaactccaaggtggcagttgagattatggaggagcttggtcagctaggtgtgggtcgaaaaactctgataaatatatcggaaccatcggcggtgcagttcggaactctaccaactgctggaaacacttcatcgttttcgtttccggcaacggaacccacggaccacgccactcctatacaagcttcagctgcttcatctcttcctccatcaattgacttgcaagaatcgattgggtctcagctcactggggttcatgaccatcatccattgaaaaaaaagtgtgatgacagtggaggattgaaaaccttgaatagtcaatttgaggtaattgtttctccatttgataattgtcacctgttgagagcagtatctactttgctattgcagaagaaggaccatcgcaatcatctttcacaagatgtcttggatcataatagtgcattcaatatagttggctataatcctttttttaattttgagtgtggaccgataaattcggcttattggcatatgagtttgcctctggctgcttggcttgagaaaattcaaaggaatgcagacatgggtttatttggaaattggggggcactaaaaacctatatgattgttaaaactttagcaaatgtgttttgtgacatcaagttaaacatgcacttcttgaagtctaaggagcaagataagcagtgtttcaaagatgtagtttttggtctgaaattatcaatgtcatctgtgacttcagatttgttggcattcgaatcatgtatgagtgggaacatgtctatggaaaaagcaatgatggcaatttctcattcaaccactgtcctgaaagttgtcattgcaaccaattgtcaacagcttaccaattttgttgcccaaattaataatgaccaattttgcttggatccttcattgatggttgccgctgtccaggatttttgtactcttacatgtaagaatgagcctatatgtgttttgagttacaatgagaagacaattgttactgttcctcaagtgttcatgcaaatgtcaaagtctgatgggttattccactattcaagggtgccagggacctttgtacatgactacttgagaaagtttattgatgaaattatcaatgcctggatcacagactcagtgctggttcagaccgatgatagggactccgtcaatttgcttcgtaagcatattgtgactgcaattgtgaaaaatggtcataatgcagaatttgctatcactcaactttctttggtggaatctgcaaagcaaagtacggttttgaaacatctatccaatcttgacacttttctacgtgtcccagctaaatatggtaatagcttgaaatttactttgtcactgataattgccttgattgaattattgagttgtggatatgttgagaaaaatacaagatggtttaccaaaatctcagtgactagtattaatagtggatgcttggatctgcaccatgatcaggggcttatttcttgtggcattgaattcaatagtttcttggtgaatagaaatgatggatacgtggttgttctatgttccaacatgttcagagatgggtttaatttggagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L6e Ribosomal_L6e_N

Protein Analysis

754

Amino Acids

83.99

Weight (kDa)

8.31

Isoelectric Point (pI)

47.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003682)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12421 FvH4_3g20453 FvH4_3g20454
malus_domestica	MD16G1253500.v1.1
rosa_chinensis	RchiOBHm_Chr3g0479611 RchiOBHm_Chr4g0393431 RchiOBHm_Chr4g0403131 RchiOBHm_Chr4g0403161 RchiOBHm_Chr4g0419441 RchiOBHm_Chr5g0007271 RchiOBHm_Chr5g0056401
rosa_multiflora	Rmu_sc0000577.1_g000014 Rmu_sc0001218.1_g000016 Rmu_sc0001787.1_g000002 Rmu_sc0001877.1_g000005 Rmu_sc0002396.1_g000007 Rmu_sc0002522.1_g000025 Rmu_sc0002699.1_g000023 Rmu_sc0002822.1_g000015 Rmu_sc0002822.1_g000017 Rmu_sc0003347.1_g000019 Rmu_sc0004174.1_g000005 Rmu_sc0004874.1_g000013 Rmu_sc0009422.1_g000002 Rmu_sc0017595.1_g000001 Rmu_sc0032285.1_g000001
rosa_roxburghii	Rroxscaffold_1G00033040 Rroxscaffold_2G00106480 Rroxscaffold_3G00267930 Rroxscaffold_4G00326640 Rroxscaffold_5G00382820 Rroxscaffold_6G00403290 Rroxscaffold_7G00191420
rosa_samantha	Rh2AG247000 Rh6CG057200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1741
AccB7I	CCANNNNNTGG	3 cut(s)	16, 625, 797
AccII	CGCG	1 cut(s)	282
AciI	CCGC	7 cut(s)	53, 74, 84, 99, 572, 770, 1602
AcoI	YGGCCR	1 cut(s)	204
AcsI	RAATTY	5 cut(s)	1174, 1224, 1904, 2021, 2177
AcuI	CTGAAG	2 cut(s)	849, 1401
AfaI	GTAC	5 cut(s)	635, 653, 1621, 1758, 1951
AfiI	CCNNNNNNNGG	8 cut(s)	16, 58, 59, 70, 625, 797, 1836, 2152
AflIII	ACRYGT	4 cut(s)	1455, 1628, 1990, 2235
AgeI	ACCGGT	1 cut(s)	380
AhdI	GACNNNNNGTC	1 cut(s)	560
AhlI	ACTAGT	1 cut(s)	2114
AjiI	CACGTC	1 cut(s)	677
AjnI	CCWGG	5 cut(s)	22, 329, 1608, 1744, 1799
AleI	CACNNNNGTG	1 cut(s)	485
AluBI	AGCT	9 cut(s)	135, 715, 724, 863, 869, 922, 1537, 2000, 2016
AluI	AGCT	9 cut(s)	135, 715, 724, 863, 869, 922, 1537, 2000, 2016
Alw26I	GTCTC	2 cut(s)	671, 921
Ama87I	CYCGRG	1 cut(s)	637
AoxI	GGCC	2 cut(s)	61, 204
ApeKI	GCWGC	3 cut(s)	259, 869, 1208
ApoI	RAATTY	5 cut(s)	1174, 1224, 1904, 2021, 2177
ArsI	GACNNNNNNTTYG	2 cut(s)	1405, 1437
AseI	ATTAAT	2 cut(s)	1560, 2121
AsiGI	ACCGGT	1 cut(s)	380
Asp700I	GAANNNNTTC	1 cut(s)	805
AspLEI	GCGC	1 cut(s)	663
AspS9I	GGNCC	6 cut(s)	61, 642, 841, 1075, 1166, 1749
AsuHPI	GGTGA	7 cut(s)	215, 259, 300, 397, 459, 1025, 2206
AsuII	TTCGAA	1 cut(s)	1434
AvaI	CYCGRG	1 cut(s)	637
AvaII	GGWCC	5 cut(s)	642, 841, 1075, 1166, 1749
BaeGI	GKGCMC	2 cut(s)	492, 1270
BamHI	GGATCC	3 cut(s)	19, 28, 1582
BanI	GGYRCC	1 cut(s)	1741
BanII	GRGCYC	1 cut(s)	53
BbsI	GAAGAC	1 cut(s)	1676
BbvI	GCAGC	3 cut(s)	271, 856, 1195
BceAI	ACGGC	1 cut(s)	97
BciT130I	CCWGG	5 cut(s)	24, 331, 1610, 1746, 1801
BciVI	GTATCC	1 cut(s)	2204
BclI	TGATCA	1 cut(s)	2149
BcoDI	GTCTC	2 cut(s)	671, 921
BcuI	ACTAGT	1 cut(s)	2114
BfaI	CTAG	2 cut(s)	725, 2115
BfuI	GTATCC	1 cut(s)	2204
BglI	GCCNNNNNGGC	1 cut(s)	572
BisI	GCNGC	5 cut(s)	260, 573, 870, 1209, 1602
BlpI	GCTNAGC	1 cut(s)	255
BlsI	GCNGC	5 cut(s)	261, 574, 871, 1210, 1603
BmcAI	AGTACT	1 cut(s)	635
Bme1390I	CCNGG	5 cut(s)	24, 331, 1610, 1746, 1801
Bme18I	GGWCC	5 cut(s)	642, 841, 1075, 1166, 1749
BmeRI	GACNNNNNGTC	1 cut(s)	560
BmeT110I	CYCGRG	1 cut(s)	637
BmgBI	CACGTC	1 cut(s)	677
BmgT120I	GGNCC	6 cut(s)	61, 642, 841, 1075, 1166, 1749
BmiI	GGNNCC	7 cut(s)	21, 30, 762, 834, 1584, 1743, 1750
BmrFI	CCNGG	5 cut(s)	24, 331, 1610, 1746, 1801
BmrI	ACTGGG	2 cut(s)	68, 936
BmsI	GCATC	1 cut(s)	2120
BmuI	ACTGGG	2 cut(s)	68, 936
BpiI	GAAGAC	1 cut(s)	1676
BplI	GAGNNNNNCTC	2 cut(s)	1186, 1218
Bpu1102I	GCTNAGC	1 cut(s)	255
Bpu14I	TTCGAA	1 cut(s)	1434
BpuEI	CTTGAG	3 cut(s)	1238, 1674, 1789
Bsa29I	ATCGAT	2 cut(s)	344, 908
BsaAI	YACGTR	2 cut(s)	1991, 2215
BsaI	GGTCTC	1 cut(s)	921
BsaJI	CCNNGG	7 cut(s)	23, 329, 567, 619, 687, 837, 1745
BsaWI	WCCGGW	1 cut(s)	380
BsaXI	ACNNNNNCTCC	2 cut(s)	259, 289
Bsc4I	CCNNNNNNNGG	8 cut(s)	16, 58, 59, 70, 625, 797, 1836, 2152
Bse118I	RCCGGY	1 cut(s)	380
Bse1I	ACTGG	3 cut(s)	44, 63, 931
Bse3DI	GCAATG	3 cut(s)	185, 1479, 1515
BseBI	CCWGG	5 cut(s)	24, 331, 1610, 1746, 1801
BseCI	ATCGAT	2 cut(s)	344, 908
BseDI	CCNNGG	7 cut(s)	23, 329, 567, 619, 687, 837, 1745
BseGI	GGATG	4 cut(s)	121, 291, 943, 2135
BseLI	CCNNNNNNNGG	8 cut(s)	16, 58, 59, 70, 625, 797, 1836, 2152
BseMI	GCAATG	3 cut(s)	185, 1479, 1515
BseMII	CTCAG	6 cut(s)	83, 269, 407, 932, 1827, 2121
BseNI	ACTGG	3 cut(s)	44, 63, 931
BseRI	GAGGAG	2 cut(s)	267, 725
BseSI	GKGCMC	2 cut(s)	492, 1270
BseXI	GCAGC	3 cut(s)	271, 856, 1195
BseYI	CCCAGC	1 cut(s)	1996
BsgI	GTGCAG	2 cut(s)	794, 2126
Bsh1236I	CGCG	1 cut(s)	282
BshFI	GGCC	2 cut(s)	63, 206
BshNI	GGYRCC	1 cut(s)	1741
BshTI	ACCGGT	1 cut(s)	380
BshVI	ATCGAT	2 cut(s)	344, 908
BsiHKCI	CYCGRG	1 cut(s)	637
BsiSI	CCGG	3 cut(s)	96, 381, 824
BslFI	GGGAC	4 cut(s)	461, 1762, 1853, 1979
BslI	CCNNNNNNNGG	8 cut(s)	16, 58, 59, 70, 625, 797, 1836, 2152
BsmAI	GTCTC	2 cut(s)	671, 921
BsmFI	GGGAC	4 cut(s)	461, 1762, 1853, 1979
BsmI	GAATGC	4 cut(s)	547, 1121, 1240, 1430
BsnI	GGCC	2 cut(s)	63, 206
Bso31I	GGTCTC	1 cut(s)	921
BsoBI	CYCGRG	1 cut(s)	637
Bsp119I	TTCGAA	1 cut(s)	1434
Bsp1286I	GDGCHC	3 cut(s)	53, 492, 1270
Bsp1407I	TGTACA	1 cut(s)	1756
Bsp143I	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
Bsp1720I	GCTNAGC	1 cut(s)	255
Bsp19I	CCATGG	2 cut(s)	567, 619
Bsp68I	TCGCGA	1 cut(s)	282
BspACI	CCGC	7 cut(s)	53, 74, 84, 99, 572, 770, 1602
BspANI	GGCC	2 cut(s)	63, 206
BspCNI	CTCAG	6 cut(s)	82, 268, 406, 931, 1826, 2120
BspDI	ATCGAT	2 cut(s)	344, 908
BspFNI	CGCG	1 cut(s)	282
BspHI	TCATGA	1 cut(s)	934
BspLI	GGNNCC	7 cut(s)	21, 30, 762, 834, 1584, 1743, 1750
BspQI	GCTCTTC	1 cut(s)	142
BspT104I	TTCGAA	1 cut(s)	1434
BspT107I	GGYRCC	1 cut(s)	1741
BspTNI	GGTCTC	1 cut(s)	921
BsrDI	GCAATG	3 cut(s)	185, 1479, 1515
BsrFI	RCCGGY	1 cut(s)	380
BsrGI	TGTACA	1 cut(s)	1756
BsrI	ACTGG	3 cut(s)	44, 63, 931
BssAI	RCCGGY	1 cut(s)	380
BssECI	CCNNGG	7 cut(s)	23, 329, 567, 619, 687, 837, 1745
BssMI	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
BssT1I	CCWWGG	3 cut(s)	567, 619, 687
Bst2UI	CCWGG	5 cut(s)	24, 331, 1610, 1746, 1801
Bst4CI	ACNGT	4 cut(s)	971, 1501, 1684, 1954
Bst6I	CTCTTC	3 cut(s)	142, 674, 885
BstAPI	GCANNNNNTGC	1 cut(s)	1907
BstAUI	TGTACA	1 cut(s)	1756
BstBAI	YACGTR	2 cut(s)	1991, 2215
BstBI	TTCGAA	1 cut(s)	1434
BstC8I	GCNNGC	1 cut(s)	53
BstDEI	CTNAG	8 cut(s)	69, 255, 393, 472, 918, 1347, 1813, 2107
BstDSI	CCRYGG	3 cut(s)	567, 619, 837
BstEII	GGTNACC	1 cut(s)	221
BstENI	CCTNNNNNAGG	1 cut(s)	68
BstF5I	GGATG	4 cut(s)	121, 291, 943, 2135
BstFNI	CGCG	1 cut(s)	282
BstHHI	GCGC	1 cut(s)	663
BstKTI	GATC	9 cut(s)	22, 31, 93, 511, 1111, 1585, 1806, 2140, 2152
BstMAI	GTCTC	2 cut(s)	671, 921
BstMBI	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
BstMWI	GCNNNNNNNGC	9 cut(s)	572, 578, 587, 721, 869, 1360, 1478, 1861, 1907
BstNI	CCWGG	5 cut(s)	24, 331, 1610, 1746, 1801
BstNSI	RCATGY	4 cut(s)	1333, 1459, 1632, 2239
BstPI	GGTNACC	1 cut(s)	221
BstSCI	CCNGG	5 cut(s)	22, 329, 1608, 1744, 1799
BstSLI	GKGCMC	2 cut(s)	492, 1270
BstUI	CGCG	1 cut(s)	282
BstV1I	GCAGC	3 cut(s)	271, 856, 1195
BstV2I	GAAGAC	1 cut(s)	1676
BstX2I	RGATCY	6 cut(s)	19, 28, 90, 508, 1582, 2137
BstXI	CCANNNNNNTGG	1 cut(s)	330
BstYI	RGATCY	6 cut(s)	19, 28, 90, 508, 1582, 2137
Bsu15I	ATCGAT	2 cut(s)	344, 908
BsuI	GTATCC	1 cut(s)	2204
BsuRI	GGCC	2 cut(s)	63, 206
BsuTUI	ATCGAT	2 cut(s)	344, 908
BtgI	CCRYGG	3 cut(s)	567, 619, 837
BtgZI	GCGATG	2 cut(s)	147, 1064
BtrI	CACGTC	1 cut(s)	677
BtsCI	GGATG	4 cut(s)	121, 291, 943, 2135
BtsI	GCAGTG	1 cut(s)	1370
BtsIMutI	CAGTG	8 cut(s)	223, 924, 976, 1370, 1497, 1821, 2033, 2115
BtuMI	TCGCGA	1 cut(s)	282
Cac8I	GCNNGC	1 cut(s)	53
CciI	TCATGA	1 cut(s)	934
CfoI	GCGC	1 cut(s)	663
Cfr10I	RCCGGY	1 cut(s)	380
Cfr13I	GGNCC	6 cut(s)	61, 642, 841, 1075, 1166, 1749
ClaI	ATCGAT	2 cut(s)	344, 908
Csp6I	GTAC	5 cut(s)	634, 652, 1620, 1757, 1950
CspAI	ACCGGT	1 cut(s)	380
CviQI	GTAC	5 cut(s)	634, 652, 1620, 1757, 1950
DdeI	CTNAG	8 cut(s)	69, 255, 393, 472, 918, 1347, 1813, 2107
DpnI	GATC	9 cut(s)	21, 30, 92, 510, 1110, 1584, 1805, 2139, 2151
DpnII	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
DriI	GACNNNNNGTC	1 cut(s)	560
EaeI	YGGCCR	1 cut(s)	204
Eam1104I	CTCTTC	3 cut(s)	142, 674, 885
Eam1105I	GACNNNNNGTC	1 cut(s)	560
EarI	CTCTTC	3 cut(s)	142, 674, 885
Eco130I	CCWWGG	3 cut(s)	567, 619, 687
Eco24I	GRGCYC	1 cut(s)	53
Eco31I	GGTCTC	1 cut(s)	921
Eco47I	GGWCC	5 cut(s)	642, 841, 1075, 1166, 1749
Eco57I	CTGAAG	2 cut(s)	849, 1401
Eco88I	CYCGRG	1 cut(s)	637
Eco91I	GGTNACC	1 cut(s)	221
EcoNI	CCTNNNNNAGG	1 cut(s)	68
EcoO109I	RGGNCCY	1 cut(s)	1749
EcoO65I	GGTNACC	1 cut(s)	221
EcoRI	GAATTC	1 cut(s)	2177
EcoRII	CCWGG	5 cut(s)	22, 329, 1608, 1744, 1799
EcoT14I	CCWWGG	3 cut(s)	567, 619, 687
EcoT38I	GRGCYC	1 cut(s)	53
ErhI	CCWWGG	3 cut(s)	567, 619, 687
FaqI	GGGAC	4 cut(s)	461, 1762, 1853, 1979
FauI	CCCGC	3 cut(s)	60, 67, 92
FauNDI	CATATG	1 cut(s)	1191
FbaI	TGATCA	1 cut(s)	2149
Fnu4HI	GCNGC	5 cut(s)	260, 573, 870, 1209, 1602
FokI	GGATG	4 cut(s)	108, 278, 930, 2142
FriOI	GRGCYC	1 cut(s)	53
Fsp4HI	GCNGC	5 cut(s)	260, 573, 870, 1209, 1602
FspBI	CTAG	2 cut(s)	725, 2115
GlaI	GCGC	1 cut(s)	662
GluI	GCNGC	5 cut(s)	260, 573, 870, 1209, 1602
GsaI	CCCAGC	1 cut(s)	2000
HaeIII	GGCC	2 cut(s)	63, 206
HapII	CCGG	3 cut(s)	96, 381, 824
HhaI	GCGC	1 cut(s)	663
Hin6I	GCGC	1 cut(s)	661
HinP1I	GCGC	1 cut(s)	661
HincII	GTYRAC	1 cut(s)	1532
HindII	GTYRAC	1 cut(s)	1532
HindIII	AAGCTT	1 cut(s)	861
HinfI	GANTC	7 cut(s)	529, 561, 905, 1436, 1811, 1841, 1934
HpaII	CCGG	3 cut(s)	96, 381, 824
HphI	GGTGA	7 cut(s)	215, 259, 300, 397, 459, 1025, 2206
Hpy166II	GTNNAC	4 cut(s)	150, 1166, 1532, 2097
Hpy188III	TCNNGA	6 cut(s)	281, 552, 935, 1339, 1504, 1976
Hpy8I	GTNNAC	4 cut(s)	150, 1166, 1532, 2097
HpyAV	CCTTC	4 cut(s)	210, 456, 1066, 1596
HpyCH4III	ACNGT	4 cut(s)	971, 1501, 1684, 1954
HpyCH4IV	ACGT	3 cut(s)	676, 1990, 2214
HpyF10VI	GCNNNNNNNGC	9 cut(s)	572, 578, 587, 721, 869, 1360, 1478, 1861, 1907
HpyF3I	CTNAG	8 cut(s)	69, 255, 393, 472, 918, 1347, 1813, 2107
HpySE526I	ACGT	3 cut(s)	676, 1990, 2214
HspAI	GCGC	1 cut(s)	661
Ksp22I	TGATCA	1 cut(s)	2149
Kzo9I	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
LguI	GCTCTTC	1 cut(s)	142
LmnI	GCTCC	3 cut(s)	448, 712, 1351
Lsp1109I	GCAGC	3 cut(s)	271, 856, 1195
LweI	GCATC	1 cut(s)	2120
MaeI	CTAG	2 cut(s)	725, 2115
MaeII	ACGT	3 cut(s)	676, 1990, 2214
MalI	GATC	9 cut(s)	21, 30, 92, 510, 1110, 1584, 1805, 2139, 2151
MboI	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
MboII	GAAGA	6 cut(s)	129, 394, 661, 872, 1081, 1681
MfeI	CAATTG	4 cut(s)	891, 1525, 1674, 1878
MflI	RGATCY	6 cut(s)	19, 28, 90, 508, 1582, 2137
MhlI	GDGCHC	3 cut(s)	53, 492, 1270
MlyI	GAGTC	3 cut(s)	570, 1805, 1835
MmeI	TCCRAC	2 cut(s)	479, 2256
MroXI	GAANNNNTTC	1 cut(s)	805
MseI	TTAA	6 cut(s)	1152, 1290, 1325, 1560, 2121, 2253
MslI	CAYNNNNRTG	5 cut(s)	126, 485, 1116, 1460, 1703
MspA1I	CMGCKG	2 cut(s)	869, 1604
MspI	CCGG	3 cut(s)	96, 381, 824
MspR9I	CCNGG	5 cut(s)	24, 331, 1610, 1746, 1801
MunI	CAATTG	4 cut(s)	891, 1525, 1674, 1878
Mva1269I	GAATGC	4 cut(s)	547, 1121, 1240, 1430
MvaI	CCWGG	5 cut(s)	24, 331, 1610, 1746, 1801
MvnI	CGCG	1 cut(s)	282
MwoI	GCNNNNNNNGC	9 cut(s)	572, 578, 587, 721, 869, 1360, 1478, 1861, 1907
NcoI	CCATGG	2 cut(s)	567, 619
NdeI	CATATG	1 cut(s)	1191
NdeII	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
NlaIV	GGNNCC	7 cut(s)	21, 30, 762, 834, 1584, 1743, 1750
NmuCI	GTSAC	9 cut(s)	221, 465, 677, 1031, 1313, 1411, 1870, 2031, 2110
NruI	TCGCGA	1 cut(s)	282
NspI	RCATGY	4 cut(s)	1333, 1459, 1632, 2239
NspV	TTCGAA	1 cut(s)	1434
OliI	CACNNNNGTG	1 cut(s)	485
PaeR7I	CTCGAG	1 cut(s)	637
PagI	TCATGA	1 cut(s)	934
PciI	ACATGT	3 cut(s)	1455, 1628, 2235
PciSI	GCTCTTC	1 cut(s)	142
PctI	GAATGC	4 cut(s)	547, 1121, 1240, 1430
PdmI	GAANNNNTTC	1 cut(s)	805
PfeI	GAWTC	4 cut(s)	529, 905, 1436, 1934
PflFI	GACNNNGTC	1 cut(s)	1844
PflMI	CCANNNNNTGG	3 cut(s)	16, 625, 797
PfoI	TCCNGGA	1 cut(s)	1608
PinAI	ACCGGT	1 cut(s)	380
PkrI	GCNGC	5 cut(s)	261, 574, 871, 1210, 1603
PleI	GAGTC	3 cut(s)	569, 1805, 1835
PpsI	GAGTC	3 cut(s)	569, 1805, 1835
Ppu21I	YACGTR	2 cut(s)	1991, 2215
PpuMI	RGGWCCY	1 cut(s)	1749
PscI	ACATGT	3 cut(s)	1455, 1628, 2235
PshBI	ATTAAT	2 cut(s)	1560, 2121
Psp5II	RGGWCCY	1 cut(s)	1749
Psp6I	CCWGG	5 cut(s)	22, 329, 1608, 1744, 1799
PspEI	GGTNACC	1 cut(s)	221
PspFI	CCCAGC	1 cut(s)	1996
PspGI	CCWGG	5 cut(s)	22, 329, 1608, 1744, 1799
PspN4I	GGNNCC	7 cut(s)	21, 30, 762, 834, 1584, 1743, 1750
PspPI	GGNCC	6 cut(s)	61, 642, 841, 1075, 1166, 1749
PspPPI	RGGWCCY	1 cut(s)	1749
PspXI	VCTCGAGB	1 cut(s)	637
PsuI	RGATCY	6 cut(s)	19, 28, 90, 508, 1582, 2137
PsyI	GACNNNGTC	1 cut(s)	1844
PvuII	CAGCTG	1 cut(s)	869
RruI	TCGCGA	1 cut(s)	282
RsaI	GTAC	5 cut(s)	635, 653, 1621, 1758, 1951
RsaNI	GTAC	5 cut(s)	634, 652, 1620, 1757, 1950
RseI	CAYNNNNRTG	5 cut(s)	126, 485, 1116, 1460, 1703
SapI	GCTCTTC	1 cut(s)	142
SaqAI	TTAA	6 cut(s)	1152, 1290, 1325, 1560, 2121, 2253
SatI	GCNGC	5 cut(s)	260, 573, 870, 1209, 1602
Sau3AI	GATC	9 cut(s)	19, 28, 90, 508, 1108, 1582, 1803, 2137, 2149
Sau96I	GGNCC	6 cut(s)	61, 642, 841, 1075, 1166, 1749
ScaI	AGTACT	1 cut(s)	635
SchI	GAGTC	3 cut(s)	570, 1805, 1835
ScrFI	CCNGG	5 cut(s)	24, 331, 1610, 1746, 1801
SduI	GDGCHC	3 cut(s)	53, 492, 1270
SfaNI	GCATC	1 cut(s)	2120
Sfr274I	CTCGAG	1 cut(s)	637
SfuI	TTCGAA	1 cut(s)	1434
SinI	GGWCC	5 cut(s)	642, 841, 1075, 1166, 1749
SlaI	CTCGAG	1 cut(s)	637
SmiMI	CAYNNNNRTG	5 cut(s)	126, 485, 1116, 1460, 1703
SmlI	CTYRAG	4 cut(s)	637, 1217, 1689, 1768
SmoI	CTYRAG	4 cut(s)	637, 1217, 1689, 1768
SpeI	ACTAGT	1 cut(s)	2114
SsiI	CCGC	7 cut(s)	53, 74, 84, 99, 572, 770, 1602
SspMI	CTAG	2 cut(s)	725, 2115
StyD4I	CCNGG	5 cut(s)	22, 329, 1608, 1744, 1799
StyI	CCWWGG	3 cut(s)	567, 619, 687
TaaI	ACNGT	4 cut(s)	971, 1501, 1684, 1954
TaiI	ACGT	3 cut(s)	679, 1993, 2217
TaqI	TCGA	5 cut(s)	344, 638, 736, 908, 1434
TaqII	GACCGA	2 cut(s)	1183, 1844
TatI	WGTACW	3 cut(s)	633, 1619, 1756
TauI	GCSGC	2 cut(s)	575, 1604
TfiI	GAWTC	4 cut(s)	529, 905, 1436, 1934
Tru1I	TTAA	6 cut(s)	1152, 1290, 1325, 1560, 2121, 2253
Tru9I	TTAA	6 cut(s)	1152, 1290, 1325, 1560, 2121, 2253
TscAI	CASTG	8 cut(s)	223, 931, 976, 1370, 1504, 1821, 2040, 2115
TseFI	GTSAC	9 cut(s)	221, 465, 677, 1031, 1313, 1411, 1870, 2031, 2110
TseI	GCWGC	3 cut(s)	259, 869, 1208
Tsp45I	GTSAC	9 cut(s)	221, 465, 677, 1031, 1313, 1411, 1870, 2031, 2110
TspDTI	ATGAA	9 cut(s)	347, 377, 388, 798, 864, 923, 1578, 1687, 1800
TspGWI	ACGGA	3 cut(s)	845, 854, 1834
TspRI	CASTG	8 cut(s)	223, 931, 976, 1370, 1504, 1821, 2040, 2115
Tth111I	GACNNNGTC	1 cut(s)	1844
Van91I	CCANNNNNTGG	3 cut(s)	16, 625, 797
VpaK11BI	GGWCC	5 cut(s)	642, 841, 1075, 1166, 1749
VspI	ATTAAT	2 cut(s)	1560, 2121
XagI	CCTNNNNNAGG	1 cut(s)	68
XapI	RAATTY	5 cut(s)	1174, 1224, 1904, 2021, 2177
XceI	RCATGY	4 cut(s)	1333, 1459, 1632, 2239
XhoI	CTCGAG	1 cut(s)	637
XmnI	GAANNNNTTC	1 cut(s)	805
XspI	CTAG	2 cut(s)	725, 2115
ZrmI	AGTACT	1 cut(s)	635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.