Universal stress protein family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48960 |
| fragaria_vesca | FvH4_5g12810 FvH4_5g12810 |
| malus_domestica | MD06G1209900.v1.1 MD14G1220800.v1.1 |
| prunus_persica | Prupe.5G216100_v2.0.a1 |
| pyrus_communis | pycom06g18750 pycom14g18260 pycom14g18270 |
| rosa_chinensis | RchiOBHm_Chr4g0434591 RchiOBHm_Chr5g0042351 RchiOBHm_Chr7g0184421 |
| rosa_laevigata | RLG00000004976 |
| rosa_multiflora | Rmu_sc0000263.1_g000010 Rmu_sc0004359.1_g000002 Rmu_sc0004836.1_g000007 Rmu_sc0009538.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00269630 |
| rosa_rugosa | Rorug05G0114200 |
| rosa_samantha | Rh1BG143000 Rh1BG224900 Rh1CG156500 Rh1CG168200 Rh1CG183200 Rh1DG252700 Rh4CG294500 Rh5AG209900 Rh5AG439700 Rh5DG299900 Rh7AG080100 Rh7BG067100 Rh7CG067400 Rh7DG067100 |
| rosa_wichuraiana | Rw5G019120 Rw7G005520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AflIII | ACRYGT | 1 cut(s) | 170 |
| AluBI | AGCT | 2 cut(s) | 73, 99 |
| AluI | AGCT | 2 cut(s) | 73, 99 |
| Alw26I | GTCTC | 1 cut(s) | 126 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| BbvI | GCAGC | 1 cut(s) | 53 |
| BclI | TGATCA | 1 cut(s) | 91 |
| BcoDI | GTCTC | 1 cut(s) | 126 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| BsaI | GGTCTC | 1 cut(s) | 126 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 144, 174 |
| Bse3DI | GCAATG | 1 cut(s) | 51 |
| BseMI | GCAATG | 1 cut(s) | 51 |
| BseMII | CTCAG | 1 cut(s) | 60 |
| BseXI | GCAGC | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 126 |
| Bso31I | GGTCTC | 1 cut(s) | 126 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspCNI | CTCAG | 1 cut(s) | 61 |
| BspTNI | GGTCTC | 1 cut(s) | 126 |
| BsrDI | GCAATG | 1 cut(s) | 51 |
| BssMI | GATC | 1 cut(s) | 91 |
| Bst4CI | ACNGT | 1 cut(s) | 160 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMAI | GTCTC | 1 cut(s) | 126 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BstNSI | RCATGY | 2 cut(s) | 167, 174 |
| BstV1I | GCAGC | 1 cut(s) | 53 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| CviAII | CATG | 4 cut(s) | 89, 112, 164, 171 |
| CviJI | RGCY | 3 cut(s) | 65, 73, 99 |
| CviKI_1 | RGCY | 3 cut(s) | 65, 73, 99 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| Eco31I | GGTCTC | 1 cut(s) | 126 |
| FaeI | CATG | 4 cut(s) | 92, 115, 167, 174 |
| FaiI | YATR | 7 cut(s) | 90, 106, 113, 140, 142, 165, 172 |
| FatI | CATG | 4 cut(s) | 88, 111, 163, 170 |
| FbaI | TGATCA | 1 cut(s) | 91 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| GluI | GCNGC | 1 cut(s) | 42 |
| Hin1II | CATG | 4 cut(s) | 92, 115, 167, 174 |
| HinfI | GANTC | 2 cut(s) | 84, 153 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 2 cut(s) | 70, 152 |
| HpyAV | CCTTC | 2 cut(s) | 8, 20 |
| HpyCH4III | ACNGT | 1 cut(s) | 160 |
| HpyCH4V | TGCA | 2 cut(s) | 41, 163 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| Hsp92II | CATG | 4 cut(s) | 92, 115, 167, 174 |
| Ksp22I | TGATCA | 1 cut(s) | 91 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| Lsp1109I | GCAGC | 1 cut(s) | 53 |
| MaeIII | GTNAC | 3 cut(s) | 7, 154, 166 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MboII | GAAGA | 3 cut(s) | 35, 43, 46 |
| MlyI | GAGTC | 2 cut(s) | 78, 162 |
| MnlI | CCTC | 1 cut(s) | 45 |
| MslI | CAYNNNNRTG | 1 cut(s) | 175 |
| NdeII | GATC | 1 cut(s) | 91 |
| NlaIII | CATG | 4 cut(s) | 92, 115, 167, 174 |
| NmuCI | GTSAC | 3 cut(s) | 7, 154, 166 |
| NspI | RCATGY | 2 cut(s) | 167, 174 |
| PciI | ACATGT | 1 cut(s) | 170 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| PleI | GAGTC | 2 cut(s) | 78, 161 |
| PpsI | GAGTC | 2 cut(s) | 78, 161 |
| PscI | ACATGT | 1 cut(s) | 170 |
| RseI | CAYNNNNRTG | 1 cut(s) | 175 |
| SatI | GCNGC | 1 cut(s) | 42 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| SchI | GAGTC | 2 cut(s) | 78, 162 |
| SetI | ASST | 2 cut(s) | 75, 101 |
| SgeI | CNNG | 6 cut(s) | 86, 92, 101, 124, 130, 176 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 175 |
| TaaI | ACNGT | 1 cut(s) | 160 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TseFI | GTSAC | 3 cut(s) | 7, 154, 166 |
| TseI | GCWGC | 1 cut(s) | 41 |
| Tsp45I | GTSAC | 3 cut(s) | 7, 154, 166 |
| TspDTI | ATGAA | 2 cut(s) | 36, 136 |
| TspRI | CASTG | 1 cut(s) | 163 |
| XceI | RCATGY | 2 cut(s) | 167, 174 |