Universal stress protein family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48960 |
| fragaria_vesca | FvH4_5g12810 FvH4_5g12810 |
| malus_domestica | MD06G1209900.v1.1 MD14G1220800.v1.1 |
| prunus_persica | Prupe.5G216100_v2.0.a1 |
| pyrus_communis | pycom06g18750 pycom14g18260 pycom14g18270 |
| rosa_chinensis | RchiOBHm_Chr4g0434591 RchiOBHm_Chr5g0042351 RchiOBHm_Chr7g0184421 |
| rosa_laevigata | RLG00000004976 |
| rosa_multiflora | Rmu_sc0000263.1_g000010 Rmu_sc0004359.1_g000002 Rmu_sc0004836.1_g000007 Rmu_sc0009538.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00269630 |
| rosa_rugosa | Rorug05G0114200 |
| rosa_samantha | Rh1BG143000 Rh1BG224900 Rh1CG156500 Rh1CG168200 Rh1CG183200 Rh1DG252700 Rh4CG294500 Rh5AG209900 Rh5AG439700 Rh5DG299900 Rh7AG080100 Rh7BG067100 Rh7CG067400 Rh7DG067100 |
| rosa_wichuraiana | Rw5G019120 Rw7G005520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 209 |
| AgsI | TTSAA | 1 cut(s) | 241 |
| AluBI | AGCT | 2 cut(s) | 73, 99 |
| AluI | AGCT | 2 cut(s) | 73, 99 |
| AlwI | GGATC | 1 cut(s) | 209 |
| AoxI | GGCC | 1 cut(s) | 210 |
| AspLEI | GCGC | 1 cut(s) | 124 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| BbsI | GAAGAC | 1 cut(s) | 41 |
| BccI | CCATC | 1 cut(s) | 179 |
| BfmI | CTRYAG | 1 cut(s) | 39 |
| BpiI | GAAGAC | 1 cut(s) | 41 |
| Bse3DI | GCAATG | 2 cut(s) | 51, 123 |
| BseMI | GCAATG | 2 cut(s) | 51, 123 |
| BseMII | CTCAG | 1 cut(s) | 60 |
| BshFI | GGCC | 1 cut(s) | 212 |
| BsnI | GGCC | 1 cut(s) | 212 |
| Bsp143I | GATC | 1 cut(s) | 201 |
| BspANI | GGCC | 1 cut(s) | 212 |
| BspCNI | CTCAG | 1 cut(s) | 61 |
| BspHI | TCATGA | 1 cut(s) | 150 |
| BspPI | GGATC | 1 cut(s) | 209 |
| BsrDI | GCAATG | 2 cut(s) | 51, 123 |
| BssMI | GATC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstHHI | GCGC | 1 cut(s) | 124 |
| BstKTI | GATC | 1 cut(s) | 204 |
| BstMBI | GATC | 1 cut(s) | 201 |
| BstSFI | CTRYAG | 1 cut(s) | 39 |
| BstV2I | GAAGAC | 1 cut(s) | 41 |
| BsuRI | GGCC | 1 cut(s) | 212 |
| CciI | TCATGA | 1 cut(s) | 150 |
| CfoI | GCGC | 1 cut(s) | 124 |
| CviAII | CATG | 1 cut(s) | 151 |
| CviJI | RGCY | 4 cut(s) | 65, 73, 99, 212 |
| CviKI_1 | RGCY | 4 cut(s) | 65, 73, 99, 212 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| DpnI | GATC | 1 cut(s) | 203 |
| DpnII | GATC | 1 cut(s) | 201 |
| FaeI | CATG | 1 cut(s) | 154 |
| FaiI | YATR | 2 cut(s) | 90, 152 |
| FatI | CATG | 1 cut(s) | 150 |
| GlaI | GCGC | 1 cut(s) | 123 |
| HaeIII | GGCC | 1 cut(s) | 212 |
| HhaI | GCGC | 1 cut(s) | 124 |
| Hin1II | CATG | 1 cut(s) | 154 |
| Hin6I | GCGC | 1 cut(s) | 122 |
| HinP1I | GCGC | 1 cut(s) | 122 |
| HinfI | GANTC | 2 cut(s) | 84, 162 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 1 cut(s) | 70 |
| Hpy188III | TCNNGA | 1 cut(s) | 151 |
| HpyAV | CCTTC | 2 cut(s) | 8, 20 |
| HpyCH4V | TGCA | 2 cut(s) | 140, 159 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| Hsp92II | CATG | 1 cut(s) | 154 |
| HspAI | GCGC | 1 cut(s) | 122 |
| Kzo9I | GATC | 1 cut(s) | 201 |
| LmnI | GCTCC | 1 cut(s) | 223 |
| MaeIII | GTNAC | 1 cut(s) | 7 |
| MalI | GATC | 1 cut(s) | 203 |
| MboI | GATC | 1 cut(s) | 201 |
| MboII | GAAGA | 5 cut(s) | 35, 43, 46, 177, 180 |
| MfeI | CAATTG | 1 cut(s) | 194 |
| MluCI | AATT | 2 cut(s) | 154, 194 |
| MlyI | GAGTC | 2 cut(s) | 78, 171 |
| MnlI | CCTC | 3 cut(s) | 45, 55, 192 |
| MunI | CAATTG | 1 cut(s) | 194 |
| NdeII | GATC | 1 cut(s) | 201 |
| NlaIII | CATG | 1 cut(s) | 154 |
| NmuCI | GTSAC | 1 cut(s) | 7 |
| PagI | TCATGA | 1 cut(s) | 150 |
| PleI | GAGTC | 2 cut(s) | 78, 170 |
| PpsI | GAGTC | 2 cut(s) | 78, 170 |
| Sau3AI | GATC | 1 cut(s) | 201 |
| SchI | GAGTC | 2 cut(s) | 78, 171 |
| SetI | ASST | 3 cut(s) | 75, 101, 248 |
| SfcI | CTRYAG | 1 cut(s) | 39 |
| SgeI | CNNG | 7 cut(s) | 86, 92, 121, 137, 163, 187, 220 |
| Sse9I | AATT | 2 cut(s) | 154, 194 |
| TasI | AATT | 2 cut(s) | 154, 194 |
| TseFI | GTSAC | 1 cut(s) | 7 |
| Tsp45I | GTSAC | 1 cut(s) | 7 |
| TspDTI | ATGAA | 3 cut(s) | 36, 139, 167 |