No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48960 |
| fragaria_vesca | FvH4_5g12810 FvH4_5g12810 |
| malus_domestica | MD06G1209900.v1.1 MD14G1220800.v1.1 |
| prunus_persica | Prupe.5G216100_v2.0.a1 |
| pyrus_communis | pycom06g18750 pycom14g18260 pycom14g18270 |
| rosa_chinensis | RchiOBHm_Chr4g0434591 RchiOBHm_Chr5g0042351 RchiOBHm_Chr7g0184421 |
| rosa_laevigata | RLG00000004976 |
| rosa_multiflora | Rmu_sc0000263.1_g000010 Rmu_sc0004359.1_g000002 Rmu_sc0004836.1_g000007 Rmu_sc0009538.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00269630 |
| rosa_rugosa | Rorug05G0114200 |
| rosa_samantha | Rh1BG143000 Rh1BG224900 Rh1CG156500 Rh1CG168200 Rh1CG183200 Rh1DG252700 Rh4CG294500 Rh5AG209900 Rh5AG439700 Rh5DG299900 Rh7AG080100 Rh7BG067100 Rh7CG067400 Rh7DG067100 |
| rosa_wichuraiana | Rw5G019120 Rw7G005520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 1 cut(s) | 166 |
| AluI | AGCT | 1 cut(s) | 166 |
| BfaI | CTAG | 1 cut(s) | 190 |
| BglII | AGATCT | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 1 cut(s) | 36 |
| Bse3DI | GCAATG | 1 cut(s) | 129 |
| BseDI | CCNNGG | 1 cut(s) | 36 |
| BseMI | GCAATG | 1 cut(s) | 129 |
| BseRI | GAGGAG | 3 cut(s) | 5, 10, 13 |
| BseYI | CCCAGC | 1 cut(s) | 166 |
| BsgI | GTGCAG | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 186 |
| BsrDI | GCAATG | 1 cut(s) | 129 |
| BssECI | CCNNGG | 1 cut(s) | 36 |
| BssMI | GATC | 1 cut(s) | 186 |
| BssT1I | CCWWGG | 1 cut(s) | 36 |
| BstC8I | GCNNGC | 1 cut(s) | 68 |
| BstKTI | GATC | 1 cut(s) | 189 |
| BstMBI | GATC | 1 cut(s) | 186 |
| BstNSI | RCATGY | 1 cut(s) | 59 |
| BstX2I | RGATCY | 1 cut(s) | 186 |
| BstYI | RGATCY | 1 cut(s) | 186 |
| BtsIMutI | CAGTG | 1 cut(s) | 183 |
| Cac8I | GCNNGC | 1 cut(s) | 68 |
| CviAII | CATG | 1 cut(s) | 56 |
| CviJI | RGCY | 3 cut(s) | 66, 153, 166 |
| CviKI_1 | RGCY | 3 cut(s) | 66, 153, 166 |
| DpnI | GATC | 1 cut(s) | 188 |
| DpnII | GATC | 1 cut(s) | 186 |
| Eco130I | CCWWGG | 1 cut(s) | 36 |
| EcoT14I | CCWWGG | 1 cut(s) | 36 |
| EcoT22I | ATGCAT | 1 cut(s) | 61 |
| ErhI | CCWWGG | 1 cut(s) | 36 |
| FaeI | CATG | 1 cut(s) | 59 |
| FaiI | YATR | 1 cut(s) | 57 |
| FatI | CATG | 1 cut(s) | 55 |
| FspBI | CTAG | 1 cut(s) | 190 |
| GsaI | CCCAGC | 1 cut(s) | 170 |
| Hin1II | CATG | 1 cut(s) | 59 |
| HinfI | GANTC | 1 cut(s) | 83 |
| Hpy166II | GTNNAC | 1 cut(s) | 181 |
| Hpy8I | GTNNAC | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 2 cut(s) | 45, 59 |
| Hsp92II | CATG | 1 cut(s) | 59 |
| Kzo9I | GATC | 1 cut(s) | 186 |
| LpnPI | CCDG | 1 cut(s) | 152 |
| MaeI | CTAG | 1 cut(s) | 190 |
| MaeIII | GTNAC | 1 cut(s) | 80 |
| MalI | GATC | 1 cut(s) | 188 |
| MboI | GATC | 1 cut(s) | 186 |
| MflI | RGATCY | 1 cut(s) | 186 |
| MlyI | GAGTC | 1 cut(s) | 77 |
| MmeI | TCCRAC | 1 cut(s) | 127 |
| MnlI | CCTC | 7 cut(s) | 17, 21, 26, 31, 34, 105, 164 |
| Mph1103I | ATGCAT | 1 cut(s) | 61 |
| NdeII | GATC | 1 cut(s) | 186 |
| NlaIII | CATG | 1 cut(s) | 59 |
| NmuCI | GTSAC | 1 cut(s) | 80 |
| NsiI | ATGCAT | 1 cut(s) | 61 |
| NspI | RCATGY | 1 cut(s) | 59 |
| PleI | GAGTC | 1 cut(s) | 77 |
| PpsI | GAGTC | 1 cut(s) | 77 |
| PspFI | CCCAGC | 1 cut(s) | 166 |
| PsuI | RGATCY | 1 cut(s) | 186 |
| Sau3AI | GATC | 1 cut(s) | 186 |
| SchI | GAGTC | 1 cut(s) | 77 |
| SetI | ASST | 1 cut(s) | 168 |
| SgeI | CNNG | 6 cut(s) | 49, 68, 79, 104, 175, 179 |
| SspMI | CTAG | 1 cut(s) | 190 |
| StyI | CCWWGG | 1 cut(s) | 36 |
| TscAI | CASTG | 1 cut(s) | 183 |
| TseFI | GTSAC | 1 cut(s) | 80 |
| Tsp45I | GTSAC | 1 cut(s) | 80 |
| TspRI | CASTG | 1 cut(s) | 183 |
| XceI | RCATGY | 1 cut(s) | 59 |
| XspI | CTAG | 1 cut(s) | 190 |
| Zsp2I | ATGCAT | 1 cut(s) | 61 |