Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003265

Physical Location & Seq

Genomic Coordinates Reverse (-)

3923587 .. 3926716

Gene Structure 3130 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28744

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGCATCAACCAAACGCGAAGCTCCCACTGAAGACGAACCAGAGCCCTCGAAGAAGCCCAGGCTCCAGCAGCGCGTGGTTCTCAATCGCGTCGATTGCGACCTAGATTTCAACATTGAAGGCAATGGGCTTCGAGGTTCTTCGCTCTACGAGCAAGGATTTGCGTATTGCTGGTCCGGTGCTAGAGCCCATGTGGGAATTACTGGCGGGAAATACTGTTTCGGCTGCAAAGTGACGTCGTTTCAGCCTGTTGAGATGGAGGACACGGCGCCGGAGCAGCGGAATCTTTGCCGGGTTGGGATTTCCAGAGGGGATGATGTGGTGGGAGGCCTTGGGGAGACAAAGCTGAGTTTTGGGTATGGTGGGACAGGGAAGTTTTCGAATGCGAGTAGGTTTTCGGACTACGGTGAGAAGTTTGGGCTTGGGGATGTGATTGTTTGTGCTGTGAATCTTGAAGAGAAGCCATTGGCTTGCATTGGTTTTTCGAAGAATGGGAAGAGTTTGGGTACGGCGATGAGGTTCAATGCTGGGGATTTGGGTCTTGGGGTGGCGGAGGGTGAAGTGAAGAATTTGCATTGGGAATGTGGGGTGTTCCCTCATGTGCTGTTGAAAAATGTGGGGGTGGAGTTGATGTTTAGTGTTGAAGATGGACTTGTTCCTGAAGAGGGTTTTAATCCTTGGGAATGTGCTCTTGAGGATGGAAATTCTGTTATGGGACCGTCTGTTTGTGAACCGAAGCATTGTGAAGTGATGATGATGGTGGGTTTGCCTGCCTCGGGCAAAACAACTTGGGCAGAGAAATGGGTGAAAGAGCACCCTGACAAACGTTATGTTGTGCTTGGGACGAATGCGGTTCTAGACCAAATGAAGGTGCCAGGACTCTTGCGGAAGCAGAATTATGGCGAACGATTTGAACGTCTGATGAGTAGAGCCACTGAAATTTTTAATACTCTTTTATCCAGAGCAGCCACCACTCCTCGCAATTACATTCTTGATCAGACAAATGTATACAAGAAGGCTCGTAAACGTAAACTTTCGCCATTCAAACTGTTCAAGAAGATTGCTGTTGTGGTGTTTCCAAGCCCTGAAGAGATGAAGGCTCGTTCTATGAAGAGATTCAGAGAAATGGGAAAGGAGGTACCTGCTGATGCGGTGAATGAAATGTTGGCCAATTATGTTTTACCTGTCAGCAGGGATTTGCCTTGTTCAGATGAGCTTTTTGATGAGGTTGTGTTTGTAGAACTCAACAGAGAAGAATCACAGAGACATTTGGATGAGATGAAGCAGGAACTTGCACGTAAATCTAATTTGAAATCGAATACATCTTCACCATATTCCTGCGGAAACTCAATTCAGTCTTATCCTTGTTCACCAAGTTATGGGGTGAGTCCTGTGCGGCCATATCCCACTCCTTCACCACAATATCAAGGAGTTTCAGCAGTCAACACTGGAAATTGGAATAGCTCTTACTCATCTGTTCCTCCACCTTACTATCAGTCACATATGCCCAACCAAGTGAATTCATATCAGACCCATCAGGGAGCTGTGCCAATTGGGACTGCAGGACCATATCAAGGCAATCAACCTCCACCTATACCTAGAGCAATTACCACTTGTTCTGGCTACTCCAGCAGTTATAATGCCAATCCTACAAGTGGCACAGCCCCTTGCAATAGTTACGGAGCAGGTTATGGTGCTGCCACTAACCCCTATCCTAGTCCGGCAGTTCAACCCTCTCTAGTAGGAGGTGCAATGGCTTCATTCACAGGCAGTGCCCCCGGATGTTATGGTGGTGCTGGGTACTCCAGTCATGCTGCTCCTCAGGCTCCAAGAGCACCTGCATTTCATCCTAGTCCTTACCCACCTGCATATGGAGGTTCACCATACGGAACTCTGCCTCCTAGACCTCAATCTGGAAGTTTTCCTGCAAACACACCTTATCCTGACGGGTACACCCCTCCTGGTTCCGGGTACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0019899 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko05164 map05164

Pfam Domains

Protein Families

AAA_33 SPRY

Protein Analysis

659

Amino Acids

71.44

Weight (kDa)

7.77

Isoelectric Point (pI)

43.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPRY	PF00622	96 - 174	1.8e-08	SPRY domain
AAA_33	PF13671	250 - 395	1.5e-26	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003265)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g03980 FvH4_3g03980 FvH4_3g03980 FvH4_3g03980 FvH4_6g02023
malus_domestica	MD05G1325500.v1.1
prunus_persica	Prupe.4G036900_v2.0.a1
pyrus_communis	pycom05g29950 pycom10g25600
rosa_chinensis	RchiOBHm_Chr5g0006311 RchiOBHm_Chr7g0240451
rosa_laevigata	RLG00000031365
rosa_multiflora	Rmu_co8212078.1_g000001 Rmu_co8265987.1_g000001 Rmu_sc0003884.1_g000002 Rmu_sc0005327.1_g000018
rosa_roxburghii	Rroxscaffold_1G00069680 Rroxscaffold_3G00220000 Rroxscaffold_3G00220020 Rroxscaffold_3G00220060
rosa_rugosa	Rorug04G0421000 Rorug07G0335900 Rorug07G0336000 Rorug07G0336100 Rorug07G0336200
rosa_samantha	Rh5AG048900 Rh5BG048000 Rh5BG048100 Rh5CG056300 Rh5DG047200 Rh7AG490300 Rh7AG490400 Rh7BG463200 Rh7CG506700 Rh7DG474300
rosa_wichuraiana	Rw5G004870 Rw7G041090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1638
AarI	CACCTGC	2 cut(s)	1846, 1873
AatII	GACGTC	1 cut(s)	239
Acc36I	ACCTGC	4 cut(s)	1150, 1676, 1846, 1873
Acc65I	GGTACC	1 cut(s)	1138
AccB1I	GGYRCC	3 cut(s)	268, 871, 1138
AccB7I	CCANNNNNTGG	1 cut(s)	1379
AccI	GTMKAC	1 cut(s)	1008
AccII	CGCG	3 cut(s)	18, 75, 90
AciI	CCGC	8 cut(s)	207, 280, 551, 851, 886, 1151, 1341, 1396
AclI	AACGTT	1 cut(s)	826
AcoI	YGGCCR	2 cut(s)	1167, 1397
AcsI	RAATTY	4 cut(s)	568, 703, 939, 1519
AcuI	CTGAAG	3 cut(s)	51, 681, 1107
AcyI	GRCGYC	2 cut(s)	236, 269
AfaI	GTAC	5 cut(s)	508, 1140, 1802, 1952, 1973
AfiI	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1655, 1871, 1913, 1967
AjnI	CCWGG	3 cut(s)	59, 874, 1960
AjuI	GAANNNNNNNTTGG	2 cut(s)	1148, 1180
AloI	GAACNNNNNNTCC	2 cut(s)	1882, 1914
AluBI	AGCT	5 cut(s)	23, 346, 1216, 1464, 1544
AluI	AGCT	5 cut(s)	23, 346, 1216, 1464, 1544
Alw21I	GWGCWC	3 cut(s)	691, 816, 1837
Alw26I	GTCTC	2 cut(s)	332, 1258
Ama87I	CYCGRG	1 cut(s)	775
AoxI	GGCC	3 cut(s)	328, 1167, 1397
ApeKI	GCWGC	6 cut(s)	70, 225, 277, 965, 1697, 1814
ApoI	RAATTY	4 cut(s)	568, 703, 939, 1519
ArsI	GACNNNNNNTTYG	2 cut(s)	708, 740
Asp700I	GAANNNNTTC	1 cut(s)	1115
Asp718I	GGTACC	1 cut(s)	1138
AspLEI	GCGC	2 cut(s)	75, 271
AspS9I	GGNCC	3 cut(s)	174, 716, 1565
AsuC2I	CCSGG	3 cut(s)	293, 1779, 1969
AsuHPI	GGTGA	9 cut(s)	419, 569, 817, 1165, 1320, 1362, 1396, 1407, 1872
AsuII	TTCGAA	2 cut(s)	380, 485
AvaI	CYCGRG	1 cut(s)	775
AvaII	GGWCC	3 cut(s)	174, 716, 1565
AxyI	CCTNAGG	1 cut(s)	1821
BaeGI	GKGCMC	1 cut(s)	1777
BaeI	ACNNNNGTAYC	2 cut(s)	1792, 1825
BalI	TGGCCA	1 cut(s)	1169
BanI	GGYRCC	3 cut(s)	268, 871, 1138
BanII	GRGCYC	2 cut(s)	48, 190
BbsI	GAAGAC	1 cut(s)	39
Bbv12I	GWGCWC	3 cut(s)	691, 816, 1837
BbvI	GCAGC	6 cut(s)	82, 212, 289, 977, 1684, 1801
BccI	CCATC	5 cut(s)	250, 641, 692, 751, 1542
BceAI	ACGGC	2 cut(s)	282, 525
BciT130I	CCWGG	3 cut(s)	61, 876, 1962
BclI	TGATCA	1 cut(s)	994
BcnI	CCSGG	3 cut(s)	293, 1779, 1969
BcoDI	GTCTC	2 cut(s)	332, 1258
BfaI	CTAG	8 cut(s)	104, 183, 857, 1599, 1716, 1739, 1851, 1902
BfmI	CTRYAG	1 cut(s)	1560
BfoI	RGCGCY	1 cut(s)	272
BfuAI	ACCTGC	4 cut(s)	1150, 1676, 1846, 1873
BisI	GCNGC	7 cut(s)	71, 226, 278, 966, 1397, 1698, 1815
BlsI	GCNGC	7 cut(s)	72, 227, 279, 967, 1398, 1699, 1816
Bme1390I	CCNGG	6 cut(s)	61, 293, 876, 1779, 1962, 1969
Bme18I	GGWCC	3 cut(s)	174, 716, 1565
BmeT110I	CYCGRG	1 cut(s)	775
BmgT120I	GGNCC	3 cut(s)	174, 716, 1565
BmiI	GGNNCC	7 cut(s)	65, 270, 717, 873, 1140, 1827, 1966
BmrFI	CCNGG	6 cut(s)	61, 293, 876, 1779, 1962, 1969
BmsI	GCATC	2 cut(s)	14, 1138
BpiI	GAAGAC	1 cut(s)	39
BpmI	CTGGAG	3 cut(s)	50, 1612, 1789
Bpu14I	TTCGAA	2 cut(s)	380, 485
BpuEI	CTTGAG	1 cut(s)	713
BpuMI	CCSGG	3 cut(s)	293, 1779, 1969
BsaAI	YACGTR	1 cut(s)	1298
BsaHI	GRCGYC	2 cut(s)	236, 269
BsaJI	CCNNGG	5 cut(s)	59, 331, 677, 774, 1777
BsaWI	WCCGGW	1 cut(s)	176
BsaXI	ACNNNNNCTCC	4 cut(s)	617, 647, 1882, 1912
Bsc4I	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1655, 1871, 1913, 1967
Bse1I	ACTGG	3 cut(s)	208, 1453, 1806
Bse21I	CCTNAGG	1 cut(s)	1821
Bse3DI	GCAATG	2 cut(s)	130, 1758
BseBI	CCWGG	3 cut(s)	61, 876, 1962
BseDI	CCNNGG	5 cut(s)	59, 331, 677, 774, 1777
BseGI	GGATG	6 cut(s)	319, 433, 703, 1279, 1787, 1846
BseLI	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1655, 1871, 1913, 1967
BseMI	GCAATG	2 cut(s)	130, 1758
BseMII	CTCAG	2 cut(s)	338, 1835
BseNI	ACTGG	3 cut(s)	208, 1453, 1806
BseRI	GAGGAG	2 cut(s)	966, 1809
BseSI	GKGCMC	1 cut(s)	1777
BseXI	GCAGC	6 cut(s)	82, 212, 289, 977, 1684, 1801
BseYI	CCCAGC	2 cut(s)	527, 1796
Bsh1236I	CGCG	3 cut(s)	18, 75, 90
BshFI	GGCC	3 cut(s)	330, 1169, 1399
BshNI	GGYRCC	3 cut(s)	268, 871, 1138
BsiHKAI	GWGCWC	3 cut(s)	691, 816, 1837
BsiHKCI	CYCGRG	1 cut(s)	775
BsiSI	CCGG	6 cut(s)	177, 272, 292, 1721, 1779, 1968
BslFI	GGGAC	4 cut(s)	379, 729, 856, 1570
BslI	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1655, 1871, 1913, 1967
BsmAI	GTCTC	2 cut(s)	332, 1258
BsmFI	GGGAC	4 cut(s)	379, 729, 856, 1570
BsmI	GAATGC	2 cut(s)	388, 853
BsnI	GGCC	3 cut(s)	330, 1169, 1399
BsoBI	CYCGRG	1 cut(s)	775
Bsp119I	TTCGAA	2 cut(s)	380, 485
Bsp1286I	GDGCHC	6 cut(s)	48, 190, 691, 816, 1777, 1837
Bsp143I	GATC	1 cut(s)	994
BspACI	CCGC	8 cut(s)	207, 280, 551, 851, 886, 1151, 1341, 1396
BspANI	GGCC	3 cut(s)	330, 1169, 1399
BspCNI	CTCAG	2 cut(s)	339, 1834
BspFNI	CGCG	3 cut(s)	18, 75, 90
BspLI	GGNNCC	7 cut(s)	65, 270, 717, 873, 1140, 1827, 1966
BspMAI	CTGCAG	1 cut(s)	1564
BspMI	ACCTGC	4 cut(s)	1150, 1676, 1846, 1873
BspT104I	TTCGAA	2 cut(s)	380, 485
BspT107I	GGYRCC	3 cut(s)	268, 871, 1138
BsrDI	GCAATG	2 cut(s)	130, 1758
BsrI	ACTGG	3 cut(s)	208, 1453, 1806
BssECI	CCNNGG	5 cut(s)	59, 331, 677, 774, 1777
BssMI	GATC	1 cut(s)	994
BssNAI	GTATAC	1 cut(s)	1009
BssNI	GRCGYC	2 cut(s)	236, 269
BssT1I	CCWWGG	2 cut(s)	331, 677
Bst1107I	GTATAC	1 cut(s)	1009
Bst2UI	CCWGG	3 cut(s)	61, 876, 1962
Bst4CI	ACNGT	4 cut(s)	218, 407, 720, 1050
Bst6I	CTCTTC	5 cut(s)	450, 491, 657, 1083, 1106
BstACI	GRCGYC	2 cut(s)	236, 269
BstBAI	YACGTR	1 cut(s)	1298
BstBI	TTCGAA	2 cut(s)	380, 485
BstC8I	GCNNGC	2 cut(s)	472, 771
BstDEI	CTNAG	2 cut(s)	347, 1821
BstF5I	GGATG	6 cut(s)	319, 433, 703, 1279, 1787, 1846
BstFNI	CGCG	3 cut(s)	18, 75, 90
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	2 cut(s)	75, 271
BstKTI	GATC	1 cut(s)	997
BstMAI	GTCTC	2 cut(s)	332, 1258
BstMBI	GATC	1 cut(s)	994
BstMWI	GCNNNNNNNGC	7 cut(s)	70, 96, 151, 277, 1629, 1823, 1832
BstNI	CCWGG	3 cut(s)	61, 876, 1962
BstSCI	CCNGG	6 cut(s)	59, 291, 874, 1777, 1960, 1967
BstSFI	CTRYAG	1 cut(s)	1560
BstSLI	GKGCMC	1 cut(s)	1777
BstUI	CGCG	3 cut(s)	18, 75, 90
BstV1I	GCAGC	6 cut(s)	82, 212, 289, 977, 1684, 1801
BstV2I	GAAGAC	1 cut(s)	39
BstZ17I	GTATAC	1 cut(s)	1009
Bsu36I	CCTNAGG	1 cut(s)	1821
BsuRI	GGCC	3 cut(s)	330, 1169, 1399
BtgZI	GCGATG	1 cut(s)	527
BtsCI	GGATG	6 cut(s)	319, 433, 703, 1279, 1787, 1846
BtsI	GCAGTG	1 cut(s)	1777
BtsIMutI	CAGTG	4 cut(s)	27, 933, 1446, 1777
BveI	ACCTGC	4 cut(s)	1150, 1676, 1846, 1873
Cac8I	GCNNGC	2 cut(s)	472, 771
CfoI	GCGC	2 cut(s)	75, 271
Cfr13I	GGNCC	3 cut(s)	174, 716, 1565
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	5 cut(s)	507, 1139, 1801, 1951, 1972
CviAII	CATG	3 cut(s)	191, 599, 1811
CviQI	GTAC	5 cut(s)	507, 1139, 1801, 1951, 1972
DdeI	CTNAG	2 cut(s)	347, 1821
DinI	GGCGCC	1 cut(s)	270
DpnI	GATC	1 cut(s)	996
DpnII	GATC	1 cut(s)	994
EaeI	YGGCCR	2 cut(s)	1167, 1397
Eam1104I	CTCTTC	5 cut(s)	450, 491, 657, 1083, 1106
EarI	CTCTTC	5 cut(s)	450, 491, 657, 1083, 1106
EciI	GGCGGA	1 cut(s)	566
Eco130I	CCWWGG	2 cut(s)	331, 677
Eco147I	AGGCCT	1 cut(s)	330
Eco24I	GRGCYC	2 cut(s)	48, 190
Eco47I	GGWCC	3 cut(s)	174, 716, 1565
Eco57I	CTGAAG	3 cut(s)	51, 681, 1107
Eco81I	CCTNAGG	1 cut(s)	1821
Eco88I	CYCGRG	1 cut(s)	775
EcoRI	GAATTC	1 cut(s)	1519
EcoRII	CCWGG	3 cut(s)	59, 874, 1960
EcoT14I	CCWWGG	2 cut(s)	331, 677
EcoT38I	GRGCYC	2 cut(s)	48, 190
EgeI	GGCGCC	1 cut(s)	270
EheI	GGCGCC	1 cut(s)	270
ErhI	CCWWGG	2 cut(s)	331, 677
FaeI	CATG	3 cut(s)	194, 602, 1814
FalI	AAGNNNNNCTT	2 cut(s)	636, 668
FaqI	GGGAC	4 cut(s)	379, 729, 856, 1570
FatI	CATG	3 cut(s)	190, 598, 1810
FauI	CCCGC	1 cut(s)	200
FauNDI	CATATG	2 cut(s)	1503, 1870
FbaI	TGATCA	1 cut(s)	994
FblI	GTMKAC	1 cut(s)	1008
Fnu4HI	GCNGC	7 cut(s)	71, 226, 278, 966, 1397, 1698, 1815
FokI	GGATG	6 cut(s)	326, 440, 710, 1286, 1794, 1833
FriOI	GRGCYC	2 cut(s)	48, 190
Fsp4HI	GCNGC	7 cut(s)	71, 226, 278, 966, 1397, 1698, 1815
FspBI	CTAG	8 cut(s)	104, 183, 857, 1599, 1716, 1739, 1851, 1902
GlaI	GCGC	2 cut(s)	74, 270
GluI	GCNGC	7 cut(s)	71, 226, 278, 966, 1397, 1698, 1815
GsaI	CCCAGC	2 cut(s)	531, 1800
GsuI	CTGGAG	3 cut(s)	50, 1612, 1789
HaeII	RGCGCY	1 cut(s)	272
HaeIII	GGCC	3 cut(s)	330, 1169, 1399
HapII	CCGG	6 cut(s)	177, 272, 292, 1721, 1779, 1968
HgaI	GACGC	1 cut(s)	79
HhaI	GCGC	2 cut(s)	75, 271
Hin1I	GRCGYC	2 cut(s)	236, 269
Hin1II	CATG	3 cut(s)	194, 602, 1814
Hin6I	GCGC	2 cut(s)	73, 269
HinP1I	GCGC	2 cut(s)	73, 269
HincII	GTYRAC	1 cut(s)	1444
HindII	GTYRAC	1 cut(s)	1444
HinfI	GANTC	6 cut(s)	283, 448, 879, 1116, 1256, 1387
HpaII	CCGG	6 cut(s)	177, 272, 292, 1721, 1779, 1968
HphI	GGTGA	9 cut(s)	419, 569, 817, 1165, 1320, 1362, 1396, 1407, 1872
Hpy166II	GTNNAC	8 cut(s)	731, 1009, 1025, 1031, 1370, 1444, 1880, 1953
Hpy188I	TCNGA	6 cut(s)	400, 921, 999, 1121, 1210, 1530
Hpy8I	GTNNAC	8 cut(s)	731, 1009, 1025, 1031, 1370, 1444, 1880, 1953
Hpy99I	CGWCG	2 cut(s)	95, 241
HpyAV	CCTTC	5 cut(s)	113, 862, 1009, 1090, 1422
HpyCH4III	ACNGT	4 cut(s)	218, 407, 720, 1050
HpyCH4IV	ACGT	5 cut(s)	236, 826, 916, 1027, 1297
HpyF10VI	GCNNNNNNNGC	7 cut(s)	70, 96, 151, 277, 1629, 1823, 1832
HpyF3I	CTNAG	2 cut(s)	347, 1821
HpySE526I	ACGT	5 cut(s)	236, 826, 916, 1027, 1297
Hsp92I	GRCGYC	2 cut(s)	236, 269
Hsp92II	CATG	3 cut(s)	194, 602, 1814
HspAI	GCGC	2 cut(s)	73, 269
KasI	GGCGCC	1 cut(s)	268
KpnI	GGTACC	1 cut(s)	1142
Ksp22I	TGATCA	1 cut(s)	994
Kzo9I	GATC	1 cut(s)	994
LmnI	GCTCC	7 cut(s)	28, 69, 274, 1541, 1682, 1822, 1831
Lsp1109I	GCAGC	6 cut(s)	82, 212, 289, 977, 1684, 1801
LweI	GCATC	2 cut(s)	14, 1138
MaeI	CTAG	8 cut(s)	104, 183, 857, 1599, 1716, 1739, 1851, 1902
MaeII	ACGT	5 cut(s)	236, 826, 916, 1027, 1297
MaeIII	GTNAC	3 cut(s)	232, 1497, 1676
MalI	GATC	1 cut(s)	996
MboI	GATC	1 cut(s)	994
MfeI	CAATTG	1 cut(s)	1551
MhlI	GDGCHC	6 cut(s)	48, 190, 691, 816, 1777, 1837
MlsI	TGGCCA	1 cut(s)	1169
MluNI	TGGCCA	1 cut(s)	1169
Mly113I	GGCGCC	1 cut(s)	269
MlyI	GAGTC	2 cut(s)	873, 1396
Mox20I	TGGCCA	1 cut(s)	1169
MroXI	GAANNNNTTC	1 cut(s)	1115
MscI	TGGCCA	1 cut(s)	1169
MseI	TTAA	2 cut(s)	672, 945
MslI	CAYNNNNRTG	1 cut(s)	1272
Msp20I	TGGCCA	1 cut(s)	1169
MspA1I	CMGCKG	1 cut(s)	280
MspI	CCGG	6 cut(s)	177, 272, 292, 1721, 1779, 1968
MspR9I	CCNGG	6 cut(s)	61, 293, 876, 1779, 1962, 1969
MunI	CAATTG	1 cut(s)	1551
Mva1269I	GAATGC	2 cut(s)	388, 853
MvaI	CCWGG	3 cut(s)	61, 876, 1962
MvnI	CGCG	3 cut(s)	18, 75, 90
MwoI	GCNNNNNNNGC	7 cut(s)	70, 96, 151, 277, 1629, 1823, 1832
NarI	GGCGCC	1 cut(s)	269
NciI	CCSGG	3 cut(s)	293, 1779, 1969
NdeI	CATATG	2 cut(s)	1503, 1870
NdeII	GATC	1 cut(s)	994
NlaIII	CATG	3 cut(s)	194, 602, 1814
NlaIV	GGNNCC	7 cut(s)	65, 270, 717, 873, 1140, 1827, 1966
NmuCI	GTSAC	2 cut(s)	232, 1497
NspV	TTCGAA	2 cut(s)	380, 485
PaqCI	CACCTGC	2 cut(s)	1846, 1873
PceI	AGGCCT	1 cut(s)	330
PcsI	WCGNNNNNNNCGW	1 cut(s)	913
PctI	GAATGC	2 cut(s)	388, 853
PdmI	GAANNNNTTC	1 cut(s)	1115
PfeI	GAWTC	4 cut(s)	283, 448, 1116, 1256
PflMI	CCANNNNNTGG	1 cut(s)	1379
PkrI	GCNGC	7 cut(s)	72, 227, 279, 967, 1398, 1699, 1816
PleI	GAGTC	2 cut(s)	873, 1395
PluTI	GGCGCC	1 cut(s)	272
PpsI	GAGTC	2 cut(s)	873, 1395
Ppu21I	YACGTR	1 cut(s)	1298
PsiI	TTATAA	1 cut(s)	1638
Psp1406I	AACGTT	1 cut(s)	826
Psp6I	CCWGG	3 cut(s)	59, 874, 1960
PspFI	CCCAGC	2 cut(s)	527, 1796
PspGI	CCWGG	3 cut(s)	59, 874, 1960
PspN4I	GGNNCC	7 cut(s)	65, 270, 717, 873, 1140, 1827, 1966
PspPI	GGNCC	3 cut(s)	174, 716, 1565
PstI	CTGCAG	1 cut(s)	1564
RsaI	GTAC	5 cut(s)	508, 1140, 1802, 1952, 1973
RsaNI	GTAC	5 cut(s)	507, 1139, 1801, 1951, 1972
RseI	CAYNNNNRTG	1 cut(s)	1272
SaqAI	TTAA	2 cut(s)	672, 945
SatI	GCNGC	7 cut(s)	71, 226, 278, 966, 1397, 1698, 1815
Sau3AI	GATC	1 cut(s)	994
Sau96I	GGNCC	3 cut(s)	174, 716, 1565
SchI	GAGTC	2 cut(s)	873, 1396
ScrFI	CCNGG	6 cut(s)	61, 293, 876, 1779, 1962, 1969
SduI	GDGCHC	6 cut(s)	48, 190, 691, 816, 1777, 1837
SfaNI	GCATC	2 cut(s)	14, 1138
SfcI	CTRYAG	1 cut(s)	1560
SfoI	GGCGCC	1 cut(s)	270
SfuI	TTCGAA	2 cut(s)	380, 485
SinI	GGWCC	3 cut(s)	174, 716, 1565
SmiMI	CAYNNNNRTG	1 cut(s)	1272
SmlI	CTYRAG	1 cut(s)	692
SmoI	CTYRAG	1 cut(s)	692
SseBI	AGGCCT	1 cut(s)	330
SsiI	CCGC	8 cut(s)	207, 280, 551, 851, 886, 1151, 1341, 1396
SspDI	GGCGCC	1 cut(s)	268
SspMI	CTAG	8 cut(s)	104, 183, 857, 1599, 1716, 1739, 1851, 1902
StuI	AGGCCT	1 cut(s)	330
StyD4I	CCNGG	6 cut(s)	59, 291, 874, 1777, 1960, 1967
StyI	CCWWGG	2 cut(s)	331, 677
TaaI	ACNGT	4 cut(s)	218, 407, 720, 1050
TaiI	ACGT	5 cut(s)	239, 829, 919, 1030, 1300
TaqI	TCGA	6 cut(s)	50, 93, 133, 380, 485, 1316
TauI	GCSGC	1 cut(s)	1399
TfiI	GAWTC	4 cut(s)	283, 448, 1116, 1256
Tru1I	TTAA	2 cut(s)	672, 945
Tru9I	TTAA	2 cut(s)	672, 945
TscAI	CASTG	4 cut(s)	34, 940, 1453, 1777
TseFI	GTSAC	2 cut(s)	232, 1497
TseI	GCWGC	6 cut(s)	70, 225, 277, 965, 1697, 1814
Tsp45I	GTSAC	2 cut(s)	232, 1497
TspDTI	ATGAA	8 cut(s)	881, 1109, 1124, 1173, 1295, 1512, 1749, 1835
TspGWI	ACGGA	2 cut(s)	1695, 1902
TspRI	CASTG	4 cut(s)	34, 940, 1453, 1777
Van91I	CCANNNNNTGG	1 cut(s)	1379
VpaK11BI	GGWCC	3 cut(s)	174, 716, 1565
XapI	RAATTY	4 cut(s)	568, 703, 939, 1519
XbaI	TCTAGA	1 cut(s)	856
XmiI	GTMKAC	1 cut(s)	1008
XmnI	GAANNNNTTC	1 cut(s)	1115
XspI	CTAG	8 cut(s)	104, 183, 857, 1599, 1716, 1739, 1851, 1902
ZraI	GACGTC	1 cut(s)	237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.