Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003265

Physical Location & Seq

Genomic Coordinates Forward (+)

90562835 .. 90565982

Gene Structure 3148 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00069680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGCATCAACCAAACGCGAAGCTCCCACTGAAGACGAACCAGAGCCCTCGAAGAAGCCCAAGCTCCAGAATCGCGTGGTTCTCAATCGCGTCGATTGCGACCTAGATTTCAACATTGAAGGCAATGGGCTTCGAGGTTCTGCGCTCTACGAGCAAGGATTTGCGTATTGCTGGTCCGGTGCTAGAGCCAATGTGGGAATTACTGGCGGGAAATACTGTTTCGGCTGCAAAGTGACGTCGTTTCAGCCTGTTGAGATGGAGGACACGGCGCCGGAGCAGCGGAATCTTTGCCGGGTTGGGATTTCCAGAGGGGATGATGTGGTGGGAGGCCTTGGGGAGACGAAGCTGAGCTTTGGTTATGGGGGGACAGGGAAGTTTTCGAATGCGAGTAGGTTTTTGGACTACGGTGAGAAGTTTGGGCTTGGGGATGTGATTGTTTGTGCTGTGAATCTTGAAGAGAAGCCATTGGCTTGCATTGGTTTTTCGAAGAATGGGAAGAGTTTGGGTACGGCGGTGAGGTTCAGTGCTGGGGATTTGGGTCTTGGGGTGGCGGAGGGTGAAGTGAAGAATTTGCATTGGGAATGTGGGGTGTTCCTTCATGTGCTGTTGAAAAATGTGGGGGTGGAGTTGATGTTTAGTGTTGAAGATGGACTTGTTCCTGAAGAGGGTTTTAAGCCTTGGGAATGTGCTCTTGAGGATGGAAATTCTGTTATGGGACTGTCTGTTTGTGAACCGAAGCATTGTGAAGTGATGATGATGGTGGGTTTACCTGCCTCAGGCAAAACAACTTGGGCAGAGAAATGGGTGAAAGAGCACCCTGAGAAGCATTATGTTGTGCTTGGGACGAATGCGGTTCTAGACCAAATGAAGGTGCCAGGGCTCTTGCGGAAGCAGAATTATGGCGAACGATTTGAACGTCTGATGAGTAGAGCCACTGAAATATTTAATACTCTTTTATCCAGAGCAGCCACTGCTCCTCGCAATTACATTCTTGATCAGACAAATGTATACAAGAAGGCTCGTAAACGTAAACTTTTGCCATTCAAACTGTTCAAGAAGATTGCTGTTGTGGTGTTTCCAAGCCCTGAAGAGATGAAGGCTCGTTCTATGAAGAGATTCAGAGAAATGGGAAAGGAGGTACCTGCTGATGCAGTGAATGAAATGTTGGCCAATTTTGTTTTACCTCTCAGCAGGGATATGCCTTGTTCAGAGGAGCTTTTTGATGAGGTTATGTTTGTAGAACTCAACAGAGAAGAATCACAGAGACATTTGGATGAGATGAAGCAGGAACTTGCACGTAAATCTAATTTGAAATCGAATCCATCGTCACCATTTTCCTGCGGAAACTCAATTCAGTCTTATCCTTGTTCACCAAGTTATGGGGTGAGTCCTGTGCGGCCATATCCCACTCCTTCACCACAATATCAAGGAGTTTCAGCAGTCAACACTGGAAATTGGAATAGCTCTTACTCATCTGTTCCTCCACCTTACTATCAGTCGCATATGCCCAACCAAGTGAATTCATATCGGACCCATCAGGGAGCTGTGCCAATTGGGACTGCAGGACCATATCAAGGCAATCAACCTCCACCTATACCTAGAGCAATTACCCATCAAGGAACTTGTTCTGGCTACTCCAGCAGTTATAATGCCAATCCTACAAGTGGTACAGCCCCTTGCAATAGTTACGAAGCAGGTTTTGGTGCTGCCACTAACCCCTATCCTAGTCCGGCAGTTCAACCCTCTCTAGTAGGAGGTGCAATGACTTCATTCACAGGCAGTGCCCCCGGATGTTATGGTGGTGCTGGGTACTCTAGTCATGCTGCTCTTCAGGCTCCAAGAGCACCTGCATTTCATCCTAGTCCTTACCCACCTGCATATGGAGGTTCACCATACGGAACTCCGCCTCCTAGACCTCAATCTGGAAGTTTTCCTGCAAACACACCTTATCCTGACGGGTACGCCCCTCCTGGCTCCGGGTACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0019899 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko05164 map05164

Pfam Domains

Protein Families

AAA_33 SPRY

Protein Analysis

662

Amino Acids

71.82

Weight (kDa)

7.77

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPRY	PF00622	96 - 173	5.5e-08	SPRY domain
AAA_33	PF13671	250 - 395	9.3e-27	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003265)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g03980 FvH4_3g03980 FvH4_3g03980 FvH4_3g03980 FvH4_6g02023
malus_domestica	MD05G1325500.v1.1
prunus_persica	Prupe.4G036900_v2.0.a1
pyrus_communis	pycom05g29950 pycom10g25600
rosa_chinensis	RchiOBHm_Chr5g0006311 RchiOBHm_Chr7g0240451
rosa_laevigata	RLG00000031365
rosa_multiflora	Rmu_co8212078.1_g000001 Rmu_co8265987.1_g000001 Rmu_sc0003884.1_g000002 Rmu_sc0005327.1_g000018
rosa_roxburghii	Rroxscaffold_1G00069680 Rroxscaffold_3G00220000 Rroxscaffold_3G00220020 Rroxscaffold_3G00220060
rosa_rugosa	Rorug04G0421000 Rorug07G0335900 Rorug07G0336000 Rorug07G0336100 Rorug07G0336200
rosa_samantha	Rh5AG048900 Rh5BG048000 Rh5BG048100 Rh5CG056300 Rh5DG047200 Rh7AG490300 Rh7AG490400 Rh7BG463200 Rh7CG506700 Rh7DG474300
rosa_wichuraiana	Rw5G004870 Rw7G041090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1647
AarI	CACCTGC	2 cut(s)	1855, 1882
AatII	GACGTC	1 cut(s)	239
Acc36I	ACCTGC	5 cut(s)	778, 1150, 1685, 1855, 1882
Acc65I	GGTACC	1 cut(s)	1138
AccB1I	GGYRCC	3 cut(s)	268, 871, 1138
AccB7I	CCANNNNNTGG	1 cut(s)	1379
AccI	GTMKAC	1 cut(s)	1008
AccII	CGCG	3 cut(s)	18, 75, 90
AciI	CCGC	9 cut(s)	207, 280, 512, 551, 851, 886, 1341, 1396, 1904
AcoI	YGGCCR	2 cut(s)	1167, 1397
AcsI	RAATTY	3 cut(s)	568, 703, 1519
AcuI	CTGAAG	4 cut(s)	51, 681, 1107, 1814
AcyI	GRCGYC	2 cut(s)	236, 269
AfaI	GTAC	6 cut(s)	508, 1140, 1669, 1811, 1961, 1982
AfiI	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1664, 1880, 1922, 1976
AjnI	CCWGG	2 cut(s)	874, 1969
AjuI	GAANNNNNNNTTGG	4 cut(s)	1148, 1180, 1683, 1715
AloI	GAACNNNNNNTCC	2 cut(s)	1891, 1923
AluBI	AGCT	7 cut(s)	23, 64, 346, 351, 1216, 1464, 1544
AluI	AGCT	7 cut(s)	23, 64, 346, 351, 1216, 1464, 1544
Alw21I	GWGCWC	3 cut(s)	691, 816, 1846
Alw26I	GTCTC	2 cut(s)	332, 1258
AlwNI	CAGNNNCTG	1 cut(s)	971
AoxI	GGCC	3 cut(s)	328, 1167, 1397
ApeKI	GCWGC	5 cut(s)	225, 277, 965, 1706, 1823
ApoI	RAATTY	3 cut(s)	568, 703, 1519
ArsI	GACNNNNNNTTYG	4 cut(s)	708, 740, 1310, 1342
Asp700I	GAANNNNTTC	2 cut(s)	1115, 1624
Asp718I	GGTACC	1 cut(s)	1138
AspLEI	GCGC	2 cut(s)	145, 271
AspS9I	GGNCC	3 cut(s)	174, 1530, 1565
AsuC2I	CCSGG	3 cut(s)	293, 1788, 1978
AsuHPI	GGTGA	9 cut(s)	419, 526, 569, 817, 1320, 1362, 1396, 1407, 1881
AsuII	TTCGAA	2 cut(s)	380, 485
AvaII	GGWCC	3 cut(s)	174, 1530, 1565
AxyI	CCTNAGG	1 cut(s)	775
BaeGI	GKGCMC	1 cut(s)	1786
BaeI	ACNNNNGTAYC	4 cut(s)	498, 531, 1801, 1834
BalI	TGGCCA	1 cut(s)	1169
BanI	GGYRCC	3 cut(s)	268, 871, 1138
BanII	GRGCYC	2 cut(s)	48, 882
BbsI	GAAGAC	1 cut(s)	39
Bbv12I	GWGCWC	3 cut(s)	691, 816, 1846
BbvI	GCAGC	5 cut(s)	212, 289, 977, 1693, 1810
BccI	CCATC	7 cut(s)	250, 641, 692, 751, 1330, 1542, 1620
BceAI	ACGGC	2 cut(s)	282, 525
BciT130I	CCWGG	2 cut(s)	876, 1971
BclI	TGATCA	1 cut(s)	994
BcnI	CCSGG	3 cut(s)	293, 1788, 1978
BcoDI	GTCTC	2 cut(s)	332, 1258
BfaI	CTAG	9 cut(s)	104, 183, 857, 1599, 1725, 1748, 1815, 1860, 1911
BfmI	CTRYAG	1 cut(s)	1560
BfoI	RGCGCY	1 cut(s)	272
BfuAI	ACCTGC	5 cut(s)	778, 1150, 1685, 1855, 1882
BisI	GCNGC	6 cut(s)	226, 278, 966, 1397, 1707, 1824
BlpI	GCTNAGC	1 cut(s)	347
BlsI	GCNGC	6 cut(s)	227, 279, 967, 1398, 1708, 1825
Bme1390I	CCNGG	5 cut(s)	293, 876, 1788, 1971, 1978
Bme18I	GGWCC	3 cut(s)	174, 1530, 1565
BmgT120I	GGNCC	3 cut(s)	174, 1530, 1565
BmiI	GGNNCC	6 cut(s)	270, 873, 1140, 1532, 1836, 1975
BmrFI	CCNGG	5 cut(s)	293, 876, 1788, 1971, 1978
BmsI	GCATC	2 cut(s)	14, 1138
BpiI	GAAGAC	1 cut(s)	39
BpmI	CTGGAG	2 cut(s)	50, 1621
Bpu1102I	GCTNAGC	1 cut(s)	347
Bpu14I	TTCGAA	2 cut(s)	380, 485
BpuEI	CTTGAG	1 cut(s)	713
BpuMI	CCSGG	3 cut(s)	293, 1788, 1978
BsaAI	YACGTR	1 cut(s)	1298
BsaHI	GRCGYC	2 cut(s)	236, 269
BsaJI	CCNNGG	4 cut(s)	331, 677, 875, 1786
BsaWI	WCCGGW	1 cut(s)	176
BsaXI	ACNNNNNCTCC	4 cut(s)	617, 647, 1891, 1921
Bsc4I	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1664, 1880, 1922, 1976
Bse1I	ACTGG	2 cut(s)	208, 1453
Bse21I	CCTNAGG	1 cut(s)	775
Bse3DI	GCAATG	2 cut(s)	130, 1767
BseBI	CCWGG	2 cut(s)	876, 1971
BseDI	CCNNGG	4 cut(s)	331, 677, 875, 1786
BseGI	GGATG	6 cut(s)	319, 433, 703, 1279, 1796, 1855
BseLI	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1664, 1880, 1922, 1976
BseMI	GCAATG	2 cut(s)	130, 1767
BseMII	CTCAG	4 cut(s)	338, 789, 810, 1201
BseNI	ACTGG	2 cut(s)	208, 1453
BseRI	GAGGAG	2 cut(s)	966, 1226
BseSI	GKGCMC	1 cut(s)	1786
BseXI	GCAGC	5 cut(s)	212, 289, 977, 1693, 1810
BseYI	CCCAGC	2 cut(s)	527, 1805
Bsh1236I	CGCG	3 cut(s)	18, 75, 90
BshFI	GGCC	3 cut(s)	330, 1169, 1399
BshNI	GGYRCC	3 cut(s)	268, 871, 1138
BsiHKAI	GWGCWC	3 cut(s)	691, 816, 1846
BsiSI	CCGG	6 cut(s)	177, 272, 292, 1730, 1788, 1977
BslFI	GGGAC	4 cut(s)	379, 729, 856, 1570
BslI	CCNNNNNNNGG	9 cut(s)	665, 776, 868, 1379, 1574, 1664, 1880, 1922, 1976
BsmAI	GTCTC	2 cut(s)	332, 1258
BsmBI	CGTCTC	1 cut(s)	332
BsmFI	GGGAC	4 cut(s)	379, 729, 856, 1570
BsmI	GAATGC	2 cut(s)	388, 853
BsnI	GGCC	3 cut(s)	330, 1169, 1399
Bsp119I	TTCGAA	2 cut(s)	380, 485
Bsp1286I	GDGCHC	6 cut(s)	48, 691, 816, 882, 1786, 1846
Bsp143I	GATC	1 cut(s)	994
Bsp1720I	GCTNAGC	1 cut(s)	347
BspACI	CCGC	9 cut(s)	207, 280, 512, 551, 851, 886, 1341, 1396, 1904
BspANI	GGCC	3 cut(s)	330, 1169, 1399
BspCNI	CTCAG	4 cut(s)	339, 788, 811, 1200
BspFNI	CGCG	3 cut(s)	18, 75, 90
BspLI	GGNNCC	6 cut(s)	270, 873, 1140, 1532, 1836, 1975
BspMAI	CTGCAG	1 cut(s)	1564
BspMI	ACCTGC	5 cut(s)	778, 1150, 1685, 1855, 1882
BspQI	GCTCTTC	1 cut(s)	1833
BspT104I	TTCGAA	2 cut(s)	380, 485
BspT107I	GGYRCC	3 cut(s)	268, 871, 1138
BsrDI	GCAATG	2 cut(s)	130, 1767
BsrI	ACTGG	2 cut(s)	208, 1453
BssECI	CCNNGG	4 cut(s)	331, 677, 875, 1786
BssMI	GATC	1 cut(s)	994
BssNAI	GTATAC	1 cut(s)	1009
BssNI	GRCGYC	2 cut(s)	236, 269
BssT1I	CCWWGG	2 cut(s)	331, 677
Bst1107I	GTATAC	1 cut(s)	1009
Bst2UI	CCWGG	2 cut(s)	876, 1971
Bst4CI	ACNGT	4 cut(s)	218, 407, 720, 1050
Bst6I	CTCTTC	6 cut(s)	450, 491, 657, 1083, 1106, 1833
BstACI	GRCGYC	2 cut(s)	236, 269
BstAPI	GCANNNNNTGC	1 cut(s)	971
BstBAI	YACGTR	1 cut(s)	1298
BstBI	TTCGAA	2 cut(s)	380, 485
BstC8I	GCNNGC	1 cut(s)	472
BstDEI	CTNAG	4 cut(s)	347, 775, 819, 1187
BstENI	CCTNNNNNAGG	1 cut(s)	774
BstF5I	GGATG	6 cut(s)	319, 433, 703, 1279, 1796, 1855
BstFNI	CGCG	3 cut(s)	18, 75, 90
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	2 cut(s)	145, 271
BstKTI	GATC	1 cut(s)	997
BstMAI	GTCTC	2 cut(s)	332, 1258
BstMBI	GATC	1 cut(s)	994
BstMWI	GCNNNNNNNGC	7 cut(s)	96, 151, 277, 971, 1638, 1832, 1841
BstNI	CCWGG	2 cut(s)	876, 1971
BstSCI	CCNGG	5 cut(s)	291, 874, 1786, 1969, 1976
BstSFI	CTRYAG	1 cut(s)	1560
BstSLI	GKGCMC	1 cut(s)	1786
BstUI	CGCG	3 cut(s)	18, 75, 90
BstV1I	GCAGC	5 cut(s)	212, 289, 977, 1693, 1810
BstV2I	GAAGAC	1 cut(s)	39
BstZ17I	GTATAC	1 cut(s)	1009
Bsu36I	CCTNAGG	1 cut(s)	775
BsuRI	GGCC	3 cut(s)	330, 1169, 1399
BtsCI	GGATG	6 cut(s)	319, 433, 703, 1279, 1796, 1855
BtsI	GCAGTG	3 cut(s)	969, 1158, 1786
BtsIMutI	CAGTG	7 cut(s)	27, 529, 933, 969, 1158, 1446, 1786
BveI	ACCTGC	5 cut(s)	778, 1150, 1685, 1855, 1882
Cac8I	GCNNGC	1 cut(s)	472
CaiI	CAGNNNCTG	1 cut(s)	971
CfoI	GCGC	2 cut(s)	145, 271
Cfr13I	GGNCC	3 cut(s)	174, 1530, 1565
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	6 cut(s)	507, 1139, 1668, 1810, 1960, 1981
CviAII	CATG	2 cut(s)	599, 1820
CviQI	GTAC	6 cut(s)	507, 1139, 1668, 1810, 1960, 1981
DdeI	CTNAG	4 cut(s)	347, 775, 819, 1187
DinI	GGCGCC	1 cut(s)	270
DpnI	GATC	1 cut(s)	996
DpnII	GATC	1 cut(s)	994
EaeI	YGGCCR	2 cut(s)	1167, 1397
Eam1104I	CTCTTC	6 cut(s)	450, 491, 657, 1083, 1106, 1833
EarI	CTCTTC	6 cut(s)	450, 491, 657, 1083, 1106, 1833
EciI	GGCGGA	2 cut(s)	566, 1893
Eco130I	CCWWGG	2 cut(s)	331, 677
Eco147I	AGGCCT	1 cut(s)	330
Eco24I	GRGCYC	2 cut(s)	48, 882
Eco47I	GGWCC	3 cut(s)	174, 1530, 1565
Eco57I	CTGAAG	4 cut(s)	51, 681, 1107, 1814
Eco81I	CCTNAGG	1 cut(s)	775
EcoNI	CCTNNNNNAGG	1 cut(s)	774
EcoRI	GAATTC	1 cut(s)	1519
EcoRII	CCWGG	2 cut(s)	874, 1969
EcoT14I	CCWWGG	2 cut(s)	331, 677
EcoT38I	GRGCYC	2 cut(s)	48, 882
EgeI	GGCGCC	1 cut(s)	270
EheI	GGCGCC	1 cut(s)	270
ErhI	CCWWGG	2 cut(s)	331, 677
Esp3I	CGTCTC	1 cut(s)	332
FaeI	CATG	2 cut(s)	602, 1823
FalI	AAGNNNNNCTT	4 cut(s)	335, 367, 636, 668
FaqI	GGGAC	4 cut(s)	379, 729, 856, 1570
FatI	CATG	2 cut(s)	598, 1819
FauI	CCCGC	1 cut(s)	200
FauNDI	CATATG	2 cut(s)	1503, 1879
FbaI	TGATCA	1 cut(s)	994
FblI	GTMKAC	1 cut(s)	1008
Fnu4HI	GCNGC	6 cut(s)	226, 278, 966, 1397, 1707, 1824
FokI	GGATG	6 cut(s)	326, 440, 710, 1286, 1803, 1842
FriOI	GRGCYC	2 cut(s)	48, 882
Fsp4HI	GCNGC	6 cut(s)	226, 278, 966, 1397, 1707, 1824
FspBI	CTAG	9 cut(s)	104, 183, 857, 1599, 1725, 1748, 1815, 1860, 1911
GlaI	GCGC	2 cut(s)	144, 270
GluI	GCNGC	6 cut(s)	226, 278, 966, 1397, 1707, 1824
GsaI	CCCAGC	2 cut(s)	531, 1809
GsuI	CTGGAG	2 cut(s)	50, 1621
HaeII	RGCGCY	1 cut(s)	272
HaeIII	GGCC	3 cut(s)	330, 1169, 1399
HapII	CCGG	6 cut(s)	177, 272, 292, 1730, 1788, 1977
HgaI	GACGC	1 cut(s)	79
HhaI	GCGC	2 cut(s)	145, 271
Hin1I	GRCGYC	2 cut(s)	236, 269
Hin1II	CATG	2 cut(s)	602, 1823
Hin6I	GCGC	2 cut(s)	143, 269
HinP1I	GCGC	2 cut(s)	143, 269
HincII	GTYRAC	1 cut(s)	1444
HindII	GTYRAC	1 cut(s)	1444
HinfI	GANTC	7 cut(s)	70, 283, 448, 1116, 1256, 1318, 1387
HpaII	CCGG	6 cut(s)	177, 272, 292, 1730, 1788, 1977
HphI	GGTGA	9 cut(s)	419, 526, 569, 817, 1320, 1362, 1396, 1407, 1881
Hpy166II	GTNNAC	8 cut(s)	731, 767, 1009, 1025, 1031, 1370, 1444, 1889
Hpy188I	TCNGA	5 cut(s)	921, 999, 1121, 1210, 1530
Hpy8I	GTNNAC	8 cut(s)	731, 767, 1009, 1025, 1031, 1370, 1444, 1889
Hpy99I	CGWCG	2 cut(s)	95, 241
HpyAV	CCTTC	6 cut(s)	113, 605, 862, 1009, 1090, 1422
HpyCH4III	ACNGT	4 cut(s)	218, 407, 720, 1050
HpyCH4IV	ACGT	4 cut(s)	236, 916, 1027, 1297
HpyF10VI	GCNNNNNNNGC	7 cut(s)	96, 151, 277, 971, 1638, 1832, 1841
HpyF3I	CTNAG	4 cut(s)	347, 775, 819, 1187
HpySE526I	ACGT	4 cut(s)	236, 916, 1027, 1297
Hsp92I	GRCGYC	2 cut(s)	236, 269
Hsp92II	CATG	2 cut(s)	602, 1823
HspAI	GCGC	2 cut(s)	143, 269
KasI	GGCGCC	1 cut(s)	268
KpnI	GGTACC	1 cut(s)	1142
Ksp22I	TGATCA	1 cut(s)	994
Kzo9I	GATC	1 cut(s)	994
LguI	GCTCTTC	1 cut(s)	1833
LmnI	GCTCC	8 cut(s)	28, 69, 274, 979, 1213, 1541, 1840, 1979
Lsp1109I	GCAGC	5 cut(s)	212, 289, 977, 1693, 1810
LweI	GCATC	2 cut(s)	14, 1138
MaeI	CTAG	9 cut(s)	104, 183, 857, 1599, 1725, 1748, 1815, 1860, 1911
MaeII	ACGT	4 cut(s)	236, 916, 1027, 1297
MaeIII	GTNAC	3 cut(s)	232, 1326, 1685
MalI	GATC	1 cut(s)	996
MboI	GATC	1 cut(s)	994
MfeI	CAATTG	1 cut(s)	1551
MhlI	GDGCHC	6 cut(s)	48, 691, 816, 882, 1786, 1846
MlsI	TGGCCA	1 cut(s)	1169
MluNI	TGGCCA	1 cut(s)	1169
Mly113I	GGCGCC	1 cut(s)	269
MlyI	GAGTC	1 cut(s)	1396
Mox20I	TGGCCA	1 cut(s)	1169
MroXI	GAANNNNTTC	2 cut(s)	1115, 1624
MscI	TGGCCA	1 cut(s)	1169
MseI	TTAA	2 cut(s)	672, 945
MslI	CAYNNNNRTG	1 cut(s)	1272
Msp20I	TGGCCA	1 cut(s)	1169
MspA1I	CMGCKG	1 cut(s)	280
MspI	CCGG	6 cut(s)	177, 272, 292, 1730, 1788, 1977
MspR9I	CCNGG	5 cut(s)	293, 876, 1788, 1971, 1978
MunI	CAATTG	1 cut(s)	1551
Mva1269I	GAATGC	2 cut(s)	388, 853
MvaI	CCWGG	2 cut(s)	876, 1971
MvnI	CGCG	3 cut(s)	18, 75, 90
MwoI	GCNNNNNNNGC	7 cut(s)	96, 151, 277, 971, 1638, 1832, 1841
NarI	GGCGCC	1 cut(s)	269
NciI	CCSGG	3 cut(s)	293, 1788, 1978
NdeI	CATATG	2 cut(s)	1503, 1879
NdeII	GATC	1 cut(s)	994
NlaIII	CATG	2 cut(s)	602, 1823
NlaIV	GGNNCC	6 cut(s)	270, 873, 1140, 1532, 1836, 1975
NmuCI	GTSAC	2 cut(s)	232, 1326
NspV	TTCGAA	2 cut(s)	380, 485
PaqCI	CACCTGC	2 cut(s)	1855, 1882
PceI	AGGCCT	1 cut(s)	330
PciSI	GCTCTTC	1 cut(s)	1833
PcsI	WCGNNNNNNNCGW	2 cut(s)	913, 1322
PctI	GAATGC	2 cut(s)	388, 853
PdmI	GAANNNNTTC	2 cut(s)	1115, 1624
PfeI	GAWTC	6 cut(s)	70, 283, 448, 1116, 1256, 1318
PflMI	CCANNNNNTGG	1 cut(s)	1379
PkrI	GCNGC	6 cut(s)	227, 279, 967, 1398, 1708, 1825
PleI	GAGTC	1 cut(s)	1395
PluTI	GGCGCC	1 cut(s)	272
PpsI	GAGTC	1 cut(s)	1395
Ppu21I	YACGTR	1 cut(s)	1298
PsiI	TTATAA	1 cut(s)	1647
Psp6I	CCWGG	2 cut(s)	874, 1969
PspFI	CCCAGC	2 cut(s)	527, 1805
PspGI	CCWGG	2 cut(s)	874, 1969
PspN4I	GGNNCC	6 cut(s)	270, 873, 1140, 1532, 1836, 1975
PspPI	GGNCC	3 cut(s)	174, 1530, 1565
PstI	CTGCAG	1 cut(s)	1564
PstNI	CAGNNNCTG	1 cut(s)	971
RsaI	GTAC	6 cut(s)	508, 1140, 1669, 1811, 1961, 1982
RsaNI	GTAC	6 cut(s)	507, 1139, 1668, 1810, 1960, 1981
RseI	CAYNNNNRTG	1 cut(s)	1272
SapI	GCTCTTC	1 cut(s)	1833
SaqAI	TTAA	2 cut(s)	672, 945
SatI	GCNGC	6 cut(s)	226, 278, 966, 1397, 1707, 1824
Sau3AI	GATC	1 cut(s)	994
Sau96I	GGNCC	3 cut(s)	174, 1530, 1565
SchI	GAGTC	1 cut(s)	1396
ScrFI	CCNGG	5 cut(s)	293, 876, 1788, 1971, 1978
SduI	GDGCHC	6 cut(s)	48, 691, 816, 882, 1786, 1846
SfaNI	GCATC	2 cut(s)	14, 1138
SfcI	CTRYAG	1 cut(s)	1560
SfoI	GGCGCC	1 cut(s)	270
SfuI	TTCGAA	2 cut(s)	380, 485
SinI	GGWCC	3 cut(s)	174, 1530, 1565
SmiMI	CAYNNNNRTG	1 cut(s)	1272
SmlI	CTYRAG	1 cut(s)	692
SmoI	CTYRAG	1 cut(s)	692
SseBI	AGGCCT	1 cut(s)	330
SsiI	CCGC	9 cut(s)	207, 280, 512, 551, 851, 886, 1341, 1396, 1904
SspDI	GGCGCC	1 cut(s)	268
SspI	AATATT	1 cut(s)	942
SspMI	CTAG	9 cut(s)	104, 183, 857, 1599, 1725, 1748, 1815, 1860, 1911
StuI	AGGCCT	1 cut(s)	330
StyD4I	CCNGG	5 cut(s)	291, 874, 1786, 1969, 1976
StyI	CCWWGG	2 cut(s)	331, 677
TaaI	ACNGT	4 cut(s)	218, 407, 720, 1050
TaiI	ACGT	4 cut(s)	239, 919, 1030, 1300
TaqI	TCGA	6 cut(s)	50, 93, 133, 380, 485, 1316
TauI	GCSGC	1 cut(s)	1399
TfiI	GAWTC	6 cut(s)	70, 283, 448, 1116, 1256, 1318
Tru1I	TTAA	2 cut(s)	672, 945
Tru9I	TTAA	2 cut(s)	672, 945
TscAI	CASTG	7 cut(s)	34, 529, 940, 976, 1158, 1453, 1786
TseFI	GTSAC	2 cut(s)	232, 1326
TseI	GCWGC	5 cut(s)	225, 277, 965, 1706, 1823
Tsp45I	GTSAC	2 cut(s)	232, 1326
TspDTI	ATGAA	9 cut(s)	587, 881, 1109, 1124, 1173, 1295, 1512, 1758, 1844
TspGWI	ACGGA	1 cut(s)	1911
TspRI	CASTG	7 cut(s)	34, 529, 940, 976, 1158, 1453, 1786
Van91I	CCANNNNNTGG	1 cut(s)	1379
VpaK11BI	GGWCC	3 cut(s)	174, 1530, 1565
XagI	CCTNNNNNAGG	1 cut(s)	774
XapI	RAATTY	3 cut(s)	568, 703, 1519
XbaI	TCTAGA	1 cut(s)	856
XmiI	GTMKAC	1 cut(s)	1008
XmnI	GAANNNNTTC	2 cut(s)	1115, 1624
XspI	CTAG	9 cut(s)	104, 183, 857, 1599, 1725, 1748, 1815, 1860, 1911
ZraI	GACGTC	1 cut(s)	237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.