RchiOBHm_Chr5g0012171

Leucine rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0004874
Physical Location & Seq
Reverse (-)
8119993 .. 8122170
2178 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29277

Sequence Viewer

Length: 2178 bp
ATGCCTGACGCGTTTTCTGATATCGCTAAAGTGACAAGATCACATATACCTGCTGCAAACGTGCCTGCAAGGATTGATGTCCCTAAAAATAGTGGACATGGCGCCACCTCTAGAGGTATTGAGCATGGCGCCACCATCACTAATGGTGATGGCAATGTGGCTCAGGATGGGCTCCCAGCAAGGAAACGTGGGAGGCCCAAAGGTTCGATGGATTCTCGCCTGAGAAAGAAAGCGAGTTTGGCACAAAAAGATCTATTAATCATCGACATAAATAACCCGTCTCATGAAGATATTCCGGATTATGGTTATGTCCAAGAGACATCATTGGGGGACGCTCCAATGTCAGAACCAATTCTAGAGAATAGAGAGATCTCCATGAATTACACTAGTGTACATGAGACATTGAGTCGAGACTCTATTATCCTTGATGATGTGTTTGCATATTCTATTGCTCAAGGAATTATAGAACATGATGATATCGAACCTCGCTCCGTTGAAGAATGTCAACGTAGAGCAGACTGGCCTAAATGGAAAAATGCGATCCAGGTTGAATTGGATTCACTAACAAAGAGACAGGTATTTGGGCCTATAACGCTGACACCCCCAAGTATAAAGCCTGTTGGCCATAAATGGGTCTTTGTTAGAAAGCGTAATGAGAAAAATAAGGTTGTTAGGTACAAAGCCCGCCTTGTGGCGCAAGGTTTCTCACAACGCCCTGGAATCGACTACGAGGAGACATACTATCCCGTAATGGACGTTATAACGTTCCGCTACCTTGTCAGTTTGGTAGTTTCCGAAAAACTTGACATGCAGCTTATGGATGTGGTTACAGCATATCTCTATGGGGATCTAGATTCAGAGATATATATGAAGGTTCCAGATGGACTTCAATTACCCAAGTCAAGTGGCTCTAAACCACGGAGCGCGTTTTCAATAAGATTGAGACGCTCACTATATGGATTGAAACAATCCGGACGGATGTGGTATAACCGTCTAAGTGACTACTTGATTGGGAAGGGATATGTCAATGATGAAATATGCCCGTGCGTGTTTATAAAAAGGACAAGTTCCGGATTTGCAATTGTAGCAGTTTATGTCGATGACATGAACCTAATTGGAACTCTAGATGAGTTAAAGGAAACTGCTAAGTATTTGAAATCCGAATTTGAGATGAAAGATCTTGGGAAAACACGGTTTTGCCTCGGATTAGAACTCGAGCACCGTAGTGATGGGATTATGATCCATCAGTCAGCATATACTCAAAAGTTATTAAGGCGCTTTAATGAAGATAAAGCAAAGCCTGTGAGTACTCCCATGATCAGTCGTAGTCTTGAGCCCGAAAAAGATCCGTTTCGTCCAAGGGATGAGGACGAAGACCTATTAGAGGCTGAAGTGCCCTATCTAAGTGCAATAGGCGCATTATTGTACTTAGCTCAATGCACAAGACCGGATATCTCATTCGCAGTGAACTTGTTAGCTCGACATAGTTCTGCGCCAACATGCCGCCATTGGATTGGCATAAAGACAATCTTTCGATACCTGAGAGGTACGATTGATATGGGCTTGTTTTATCCCTACAGAGAGAAGAGAAACAACGGAAGTGTTGGATCGGACTCCACAAGGCAAAATGCCACCTTCCGTGCTCCTCCTCCCCTCCATCAAAATGATAACAATGTTTTGATGGGTTTTGCTGATGCAGTGTACCTCTCTGACCCTCATAAAGGTCGCTCCCAAACGGGTTATGTCTTTACCATGGGAAGCACTGCGATATCTTGGAGGTCTACAAAGCAGACCCTTGTTGCCACTTCCTCAAATCATGCAGAGATTATTGCTCTACATGAAGCCGTGCGAGAATGCATATGGCTAAGGTCTGTAGTTAGACACATTCGAGGAACTTGTGGTTTTAAGTCTATCACAGATAAACCTACATGCATTTATGAAGATAATGCAGCTTGCATTGAGCAAATGAAATTAGGTTTCATCAAGGGTGACAACACCAAGCATATATCGCCAAAGTTCTTTTACAATCAGCAACAACAGGCACTTCTAAATATTGAAGTGAACCAAATCCGATCAGAGGATAATGTAGCGGACTTATTTACTAAGTCGTTACCAAAATCCACCTTCGAGAAACATGTGAAGAGCATCGGATTGAGAAAGTTATCCGAACTCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

725

Amino Acids

81.96

Weight (kDa)

8.78

Isoelectric Point (pI)

47.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_2 PF07727 200 - 440 6.4e-58 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 761, 1055
Acc36I ACCTGC 1 cut(s) 58
AccB1I GGYRCC 2 cut(s) 101, 128
AccI GTMKAC 1 cut(s) 1781
AccII CGCG 2 cut(s) 11, 926
AccIII TCCGGA 3 cut(s) 295, 971, 1070
AciI CCGC 4 cut(s) 685, 769, 1504, 2090
AclI AACGTT 1 cut(s) 764
AclWI GGATC 5 cut(s) 535, 855, 1234, 1340, 1615
AcoI YGGCCR 1 cut(s) 622
AcsI RAATTY 1 cut(s) 1163
AcuI CTGAAG 1 cut(s) 1410
AcyI GRCGYC 2 cut(s) 102, 129
AfaI GTAC 6 cut(s) 393, 677, 1309, 1427, 1549, 1703
AfiI CCNNNNNNNGG 6 cut(s) 302, 631, 691, 1384, 1721, 2077
AflIII ACRYGT 2 cut(s) 9, 2134
AgsI TTSAA 7 cut(s) 497, 551, 890, 933, 964, 1156, 2057
AhdI GACNNNNNGTC 1 cut(s) 405
AhlI ACTAGT 1 cut(s) 386
AjnI CCWGG 2 cut(s) 543, 715
AjuI GAANNNNNNNTTGG 2 cut(s) 221, 253
AleI CACNNNNGTG 1 cut(s) 1224
AluBI AGCT 4 cut(s) 814, 1433, 1478, 1952
AluI AGCT 4 cut(s) 814, 1433, 1478, 1952
Alw21I GWGCWC 2 cut(s) 1221, 1645
Alw26I GTCTC 7 cut(s) 285, 311, 392, 405, 565, 728, 937
AlwI GGATC 5 cut(s) 535, 855, 1234, 1340, 1615
Ama87I CYCGRG 1 cut(s) 1214
Aor13HI TCCGGA 3 cut(s) 295, 971, 1070
AoxI GGCC 4 cut(s) 194, 521, 584, 622
ApeKI GCWGC 3 cut(s) 53, 811, 1949
ApoI RAATTY 1 cut(s) 1163
AseI ATTAAT 1 cut(s) 257
Asp700I GAANNNNTTC 2 cut(s) 291, 351
AspLEI GCGC 7 cut(s) 104, 131, 697, 926, 1278, 1418, 1495
AspS9I GGNCC 2 cut(s) 195, 584
AsuHPI GGTGA 2 cut(s) 158, 2000
AvaI CYCGRG 1 cut(s) 1214
BaeGI GKGCMC 1 cut(s) 1398
BalI TGGCCA 1 cut(s) 624
BanI GGYRCC 2 cut(s) 101, 128
BanII GRGCYC 2 cut(s) 174, 1338
BbsI GAAGAC 1 cut(s) 1380
Bbv12I GWGCWC 2 cut(s) 1221, 1645
BbvI GCAGC 3 cut(s) 40, 823, 1961
BccI CCATC 9 cut(s) 143, 143, 161, 202, 875, 1223, 1251, 1665, 1675
BceAI ACGGC 1 cut(s) 1829
BciT130I CCWGG 2 cut(s) 545, 717
BclI TGATCA 1 cut(s) 1317
BcoDI GTCTC 7 cut(s) 285, 311, 392, 405, 565, 728, 937
BcuI ACTAGT 1 cut(s) 386
BfaI CTAG 5 cut(s) 111, 356, 387, 851, 1124
BfmI CTRYAG 2 cut(s) 1576, 1872
BfoI RGCGCY 3 cut(s) 105, 132, 1279
BfuAI ACCTGC 1 cut(s) 58
BglII AGATCT 3 cut(s) 250, 369, 1177
BisI GCNGC 4 cut(s) 54, 812, 1504, 1950
BlsI GCNGC 4 cut(s) 55, 813, 1505, 1951
BmcAI AGTACT 1 cut(s) 1309
Bme1390I CCNGG 2 cut(s) 545, 717
BmeRI GACNNNNNGTC 1 cut(s) 405
BmeT110I CYCGRG 1 cut(s) 1214
BmgT120I GGNCC 2 cut(s) 195, 584
BmiI GGNNCC 4 cut(s) 103, 130, 173, 876
BmrFI CCNGG 2 cut(s) 545, 717
BmsI GCATC 2 cut(s) 1684, 2154
BpiI GAAGAC 1 cut(s) 1380
Bpu10I CCTNAGC 2 cut(s) 162, 1865
BpuEI CTTGAG 2 cut(s) 438, 1352
BsaBI GATNNNNATC 1 cut(s) 1238
BsaHI GRCGYC 2 cut(s) 102, 129
BsaJI CCNNGG 5 cut(s) 715, 917, 1201, 1358, 1752
BsaWI WCCGGW 4 cut(s) 295, 971, 1070, 1447
Bsc4I CCNNNNNNNGG 6 cut(s) 302, 631, 691, 1384, 1721, 2077
Bse1I ACTGG 1 cut(s) 524
Bse3DI GCAATG 1 cut(s) 160
Bse8I GATNNNNATC 1 cut(s) 1238
BseAI TCCGGA 3 cut(s) 295, 971, 1070
BseBI CCWGG 2 cut(s) 545, 717
BseDI CCNNGG 5 cut(s) 715, 917, 1201, 1358, 1752
BseGI GGATG 4 cut(s) 172, 826, 984, 1369
BseJI GATNNNNATC 1 cut(s) 1238
BseLI CCNNNNNNNGG 6 cut(s) 302, 631, 691, 1384, 1721, 2077
BseMI GCAATG 1 cut(s) 160
BseMII CTCAG 3 cut(s) 176, 212, 1532
BseNI ACTGG 1 cut(s) 524
BseRI GAGGAG 3 cut(s) 746, 1635, 1638
BseSI GKGCMC 1 cut(s) 1398
BseXI GCAGC 3 cut(s) 40, 823, 1961
BseYI CCCAGC 1 cut(s) 175
Bsh1236I CGCG 2 cut(s) 11, 926
BshFI GGCC 4 cut(s) 196, 523, 586, 624
BshNI GGYRCC 2 cut(s) 101, 128
BsiHKAI GWGCWC 2 cut(s) 1221, 1645
BsiHKCI CYCGRG 1 cut(s) 1214
BsiSI CCGG 4 cut(s) 296, 972, 1071, 1448
BslFI GGGAC 2 cut(s) 65, 344
BslI CCNNNNNNNGG 6 cut(s) 302, 631, 691, 1384, 1721, 2077
BsmAI GTCTC 7 cut(s) 285, 311, 392, 405, 565, 728, 937
BsmBI CGTCTC 2 cut(s) 285, 937
BsmFI GGGAC 2 cut(s) 65, 344
BsmI GAATGC 1 cut(s) 1859
BsnI GGCC 4 cut(s) 196, 523, 586, 624
BsoBI CYCGRG 1 cut(s) 1214
Bsp1286I GDGCHC 5 cut(s) 174, 1221, 1338, 1398, 1645
Bsp13I TCCGGA 3 cut(s) 295, 971, 1070
Bsp1407I TGTACA 1 cut(s) 391
Bsp19I CCATGG 1 cut(s) 1752
BspACI CCGC 4 cut(s) 685, 769, 1504, 2090
BspANI GGCC 4 cut(s) 196, 523, 586, 624
BspCNI CTCAG 3 cut(s) 175, 213, 1533
BspEI TCCGGA 3 cut(s) 295, 971, 1070
BspFNI CGCG 2 cut(s) 11, 926
BspHI TCATGA 1 cut(s) 283
BspLI GGNNCC 4 cut(s) 103, 130, 173, 876
BspMI ACCTGC 1 cut(s) 58
BspPI GGATC 5 cut(s) 535, 855, 1234, 1340, 1615
BspQI GCTCTTC 1 cut(s) 2135
BspT107I GGYRCC 2 cut(s) 101, 128
BsrDI GCAATG 1 cut(s) 160
BsrGI TGTACA 1 cut(s) 391
BsrI ACTGG 1 cut(s) 524
BssECI CCNNGG 5 cut(s) 715, 917, 1201, 1358, 1752
BssNI GRCGYC 2 cut(s) 102, 129
BssT1I CCWWGG 2 cut(s) 1358, 1752
Bst2UI CCWGG 2 cut(s) 545, 717
Bst4CI ACNGT 3 cut(s) 992, 1194, 1223
Bst6I CTCTTC 2 cut(s) 1580, 2135
BstACI GRCGYC 2 cut(s) 102, 129
BstAUI TGTACA 1 cut(s) 391
BstC8I GCNNGC 3 cut(s) 66, 685, 1954
BstDEI CTNAG 9 cut(s) 162, 221, 995, 1146, 1403, 1429, 1541, 1865, 2103
BstDSI CCRYGG 2 cut(s) 917, 1752
BstENI CCTNNNNNAGG 2 cut(s) 1382, 1719
BstF5I GGATG 4 cut(s) 172, 826, 984, 1369
BstFNI CGCG 2 cut(s) 11, 926
BstH2I RGCGCY 3 cut(s) 105, 132, 1279
BstHHI GCGC 7 cut(s) 104, 131, 697, 926, 1278, 1418, 1495
BstMAI GTCTC 7 cut(s) 285, 311, 392, 405, 565, 728, 937
BstMWI GCNNNNNNNGC 5 cut(s) 239, 592, 1085, 1415, 2008
BstNI CCWGG 2 cut(s) 545, 717
BstNSI RCATGY 4 cut(s) 811, 1503, 1932, 2138
BstSCI CCNGG 2 cut(s) 543, 715
BstSFI CTRYAG 2 cut(s) 1576, 1872
BstSLI GKGCMC 1 cut(s) 1398
BstUI CGCG 2 cut(s) 11, 926
BstV1I GCAGC 3 cut(s) 40, 823, 1961
BstV2I GAAGAC 1 cut(s) 1380
BstX2I RGATCY 5 cut(s) 250, 369, 847, 1177, 1345
BstXI CCANNNNNNTGG 1 cut(s) 1514
BstYI RGATCY 5 cut(s) 250, 369, 847, 1177, 1345
BsuRI GGCC 4 cut(s) 196, 523, 586, 624
BtgI CCRYGG 2 cut(s) 917, 1752
BtsCI GGATG 4 cut(s) 172, 826, 984, 1369
BtsI GCAGTG 3 cut(s) 1470, 1704, 1761
BtsIMutI CAGTG 3 cut(s) 1470, 1704, 1761
BveI ACCTGC 1 cut(s) 58
Cac8I GCNNGC 3 cut(s) 66, 685, 1954
CciI TCATGA 1 cut(s) 283
CfoI GCGC 7 cut(s) 104, 131, 697, 926, 1278, 1418, 1495
Cfr13I GGNCC 2 cut(s) 195, 584
CseI GACGC 3 cut(s) 17, 341, 954
Csp6I GTAC 6 cut(s) 392, 676, 1308, 1426, 1548, 1702
CspCI CAANNNNNGTGG 2 cut(s) 886, 921
CviQI GTAC 6 cut(s) 392, 676, 1308, 1426, 1548, 1702
DdeI CTNAG 9 cut(s) 162, 221, 995, 1146, 1403, 1429, 1541, 1865, 2103
DinI GGCGCC 2 cut(s) 103, 130
DriI GACNNNNNGTC 1 cut(s) 405
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 2 cut(s) 1580, 2135
Eam1105I GACNNNNNGTC 1 cut(s) 405
EarI CTCTTC 2 cut(s) 1580, 2135
Eco130I CCWWGG 2 cut(s) 1358, 1752
Eco24I GRGCYC 2 cut(s) 174, 1338
Eco32I GATATC 4 cut(s) 22, 478, 1453, 1770
Eco57I CTGAAG 1 cut(s) 1410
Eco88I CYCGRG 1 cut(s) 1214
EcoNI CCTNNNNNAGG 2 cut(s) 1382, 1719
EcoRII CCWGG 2 cut(s) 543, 715
EcoRV GATATC 4 cut(s) 22, 478, 1453, 1770
EcoT14I CCWWGG 2 cut(s) 1358, 1752
EcoT22I ATGCAT 2 cut(s) 1859, 1934
EcoT38I GRGCYC 2 cut(s) 174, 1338
EgeI GGCGCC 2 cut(s) 103, 130
EheI GGCGCC 2 cut(s) 103, 130
ErhI CCWWGG 2 cut(s) 1358, 1752
Esp3I CGTCTC 2 cut(s) 285, 937
FalI AAGNNNNNCTT 4 cut(s) 672, 704, 1514, 1546
FaqI GGGAC 2 cut(s) 65, 344
FauI CCCGC 1 cut(s) 692
FauNDI CATATG 1 cut(s) 1859
FbaI TGATCA 1 cut(s) 1317
FblI GTMKAC 1 cut(s) 1781
Fnu4HI GCNGC 4 cut(s) 54, 812, 1504, 1950
FokI GGATG 4 cut(s) 179, 833, 991, 1376
FriOI GRGCYC 2 cut(s) 174, 1338
Fsp4HI GCNGC 4 cut(s) 54, 812, 1504, 1950
FspBI CTAG 5 cut(s) 111, 356, 387, 851, 1124
GlaI GCGC 7 cut(s) 103, 130, 696, 925, 1277, 1417, 1494
GluI GCNGC 4 cut(s) 54, 812, 1504, 1950
GsaI CCCAGC 1 cut(s) 179
HaeII RGCGCY 3 cut(s) 105, 132, 1279
HaeIII GGCC 4 cut(s) 196, 523, 586, 624
HapII CCGG 4 cut(s) 296, 972, 1071, 1448
HgaI GACGC 3 cut(s) 17, 341, 954
HhaI GCGC 7 cut(s) 104, 131, 697, 926, 1278, 1418, 1495
Hin1I GRCGYC 2 cut(s) 102, 129
Hin6I GCGC 7 cut(s) 102, 129, 695, 924, 1276, 1416, 1493
HinP1I GCGC 7 cut(s) 102, 129, 695, 924, 1276, 1416, 1493
HincII GTYRAC 1 cut(s) 506
HindII GTYRAC 1 cut(s) 506
HinfI GANTC 7 cut(s) 212, 406, 413, 557, 720, 854, 1613
HpaII CCGG 4 cut(s) 296, 972, 1071, 1448
HphI GGTGA 2 cut(s) 158, 2000
Hpy166II GTNNAC 7 cut(s) 95, 392, 506, 1468, 1702, 1782, 2062
Hpy8I GTNNAC 7 cut(s) 95, 392, 506, 1468, 1702, 1782, 2062
HpyAV CCTTC 4 cut(s) 865, 1009, 1645, 2134
HpyCH4III ACNGT 3 cut(s) 992, 1194, 1223
HpyCH4IV ACGT 5 cut(s) 60, 187, 508, 756, 764
HpyF10VI GCNNNNNNNGC 5 cut(s) 239, 592, 1085, 1415, 2008
HpyF3I CTNAG 9 cut(s) 162, 221, 995, 1146, 1403, 1429, 1541, 1865, 2103
HpySE526I ACGT 5 cut(s) 60, 187, 508, 756, 764
Hsp92I GRCGYC 2 cut(s) 102, 129
HspAI GCGC 7 cut(s) 102, 129, 695, 924, 1276, 1416, 1493
KasI GGCGCC 2 cut(s) 101, 128
Kpn2I TCCGGA 3 cut(s) 295, 971, 1070
Ksp22I TGATCA 1 cut(s) 1317
LguI GCTCTTC 1 cut(s) 2135
LmnI GCTCC 6 cut(s) 177, 340, 494, 921, 1648, 1733
Lsp1109I GCAGC 3 cut(s) 40, 823, 1961
LweI GCATC 2 cut(s) 1684, 2154
MaeI CTAG 5 cut(s) 111, 356, 387, 851, 1124
MaeII ACGT 5 cut(s) 60, 187, 508, 756, 764
MaeIII GTNAC 5 cut(s) 31, 826, 998, 1988, 2109
MboII GAAGA 7 cut(s) 299, 509, 1298, 1385, 1597, 1952, 2152
MfeI CAATTG 1 cut(s) 1080
MflI RGATCY 5 cut(s) 250, 369, 847, 1177, 1345
MhlI GDGCHC 5 cut(s) 174, 1221, 1338, 1398, 1645
MlsI TGGCCA 1 cut(s) 624
MluCI AATT 9 cut(s) 351, 379, 459, 551, 890, 1080, 1113, 1163, 1970
MluI ACGCGT 1 cut(s) 9
MluNI TGGCCA 1 cut(s) 624
Mly113I GGCGCC 2 cut(s) 102, 129
MlyI GAGTC 3 cut(s) 407, 415, 1607
MmeI TCCRAC 1 cut(s) 1585
Mox20I TGGCCA 1 cut(s) 624
Mph1103I ATGCAT 2 cut(s) 1859, 1934
MroI TCCGGA 3 cut(s) 295, 971, 1070
MroXI GAANNNNTTC 2 cut(s) 291, 351
MscI TGGCCA 1 cut(s) 624
MseI TTAA 5 cut(s) 257, 1133, 1271, 1281, 1905
MslI CAYNNNNRTG 2 cut(s) 1224, 1662
Msp20I TGGCCA 1 cut(s) 624
MspI CCGG 4 cut(s) 296, 972, 1071, 1448
MspR9I CCNGG 2 cut(s) 545, 717
MunI CAATTG 1 cut(s) 1080
Mva1269I GAATGC 1 cut(s) 1859
MvaI CCWGG 2 cut(s) 545, 717
MvnI CGCG 2 cut(s) 11, 926
MwoI GCNNNNNNNGC 5 cut(s) 239, 592, 1085, 1415, 2008
NarI GGCGCC 2 cut(s) 102, 129
NcoI CCATGG 1 cut(s) 1752
NdeI CATATG 1 cut(s) 1859
NlaIV GGNNCC 4 cut(s) 103, 130, 173, 876
NmuCI GTSAC 3 cut(s) 31, 998, 1988
NsiI ATGCAT 2 cut(s) 1859, 1934
NspI RCATGY 4 cut(s) 811, 1503, 1932, 2138
OliI CACNNNNGTG 1 cut(s) 1224
PaeR7I CTCGAG 1 cut(s) 1214
PagI TCATGA 1 cut(s) 283
PciI ACATGT 1 cut(s) 2134
PciSI GCTCTTC 1 cut(s) 2135
PctI GAATGC 1 cut(s) 1859
PdmI GAANNNNTTC 2 cut(s) 291, 351
PfeI GAWTC 4 cut(s) 212, 557, 720, 854
PkrI GCNGC 4 cut(s) 55, 813, 1505, 1951
PleI GAGTC 3 cut(s) 407, 414, 1607
PluTI GGCGCC 2 cut(s) 105, 132
PpsI GAGTC 3 cut(s) 407, 414, 1607
PscI ACATGT 1 cut(s) 2134
PshBI ATTAAT 1 cut(s) 257
PsiI TTATAA 2 cut(s) 761, 1055
Psp1406I AACGTT 1 cut(s) 764
Psp6I CCWGG 2 cut(s) 543, 715
PspFI CCCAGC 1 cut(s) 175
PspGI CCWGG 2 cut(s) 543, 715
PspN4I GGNNCC 4 cut(s) 103, 130, 173, 876
PspPI GGNCC 2 cut(s) 195, 584
PspXI VCTCGAGB 1 cut(s) 1214
PsuI RGATCY 5 cut(s) 250, 369, 847, 1177, 1345
RsaI GTAC 6 cut(s) 393, 677, 1309, 1427, 1549, 1703
RsaNI GTAC 6 cut(s) 392, 676, 1308, 1426, 1548, 1702
RseI CAYNNNNRTG 2 cut(s) 1224, 1662
SapI GCTCTTC 1 cut(s) 2135
SaqAI TTAA 5 cut(s) 257, 1133, 1271, 1281, 1905
SatI GCNGC 4 cut(s) 54, 812, 1504, 1950
Sau96I GGNCC 2 cut(s) 195, 584
ScaI AGTACT 1 cut(s) 1309
SchI GAGTC 3 cut(s) 407, 415, 1607
ScrFI CCNGG 2 cut(s) 545, 717
SduI GDGCHC 5 cut(s) 174, 1221, 1338, 1398, 1645
SfaNI GCATC 2 cut(s) 1684, 2154
SfcI CTRYAG 2 cut(s) 1576, 1872
SfoI GGCGCC 2 cut(s) 103, 130
Sfr274I CTCGAG 1 cut(s) 1214
SlaI CTCGAG 1 cut(s) 1214
SmiMI CAYNNNNRTG 2 cut(s) 1224, 1662
SmlI CTYRAG 3 cut(s) 453, 1214, 1331
SmoI CTYRAG 3 cut(s) 453, 1214, 1331
SpeI ACTAGT 1 cut(s) 386
Sse9I AATT 9 cut(s) 351, 379, 459, 551, 890, 1080, 1113, 1163, 1970
SsiI CCGC 4 cut(s) 685, 769, 1504, 2090
SspDI GGCGCC 2 cut(s) 101, 128
SspI AATATT 1 cut(s) 2053
SspMI CTAG 5 cut(s) 111, 356, 387, 851, 1124
StyD4I CCNGG 2 cut(s) 543, 715
StyI CCWWGG 2 cut(s) 1358, 1752
TaaI ACNGT 3 cut(s) 992, 1194, 1223
TaiI ACGT 5 cut(s) 63, 190, 511, 759, 767
TasI AATT 9 cut(s) 351, 379, 459, 551, 890, 1080, 1113, 1163, 1970
TatI WGTACW 3 cut(s) 391, 1307, 1425
TauI GCSGC 1 cut(s) 1506
TfiI GAWTC 4 cut(s) 212, 557, 720, 854
Tru1I TTAA 5 cut(s) 257, 1133, 1271, 1281, 1905
Tru9I TTAA 5 cut(s) 257, 1133, 1271, 1281, 1905
TscAI CASTG 3 cut(s) 1470, 1704, 1768
TseFI GTSAC 3 cut(s) 31, 998, 1988
TseI GCWGC 3 cut(s) 53, 811, 1949
Tsp45I GTSAC 3 cut(s) 31, 998, 1988
TspGWI ACGGA 6 cut(s) 481, 934, 991, 1338, 1611, 1628
TspRI CASTG 3 cut(s) 1470, 1704, 1768
VspI ATTAAT 1 cut(s) 257
XagI CCTNNNNNAGG 2 cut(s) 1382, 1719
XapI RAATTY 1 cut(s) 1163
XbaI TCTAGA 4 cut(s) 110, 355, 850, 1123
XceI RCATGY 4 cut(s) 811, 1503, 1932, 2138
XcmI CCANNNNNNNNNTGG 1 cut(s) 205
XhoI CTCGAG 1 cut(s) 1214
XmiI GTMKAC 1 cut(s) 1781
XmnI GAANNNNTTC 2 cut(s) 291, 351
XspI CTAG 5 cut(s) 111, 356, 387, 851, 1124
ZrmI AGTACT 1 cut(s) 1309
Zsp2I ATGCAT 2 cut(s) 1859, 1934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.