Xylose isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57655 AT5G57655 |
| fragaria_vesca | FvH4_4g32520 FvH4_4g32520 FvH4_4g32520 |
| malus_domestica | MD13G1265000.v1.1 MD16G1265900.v1.1 |
| prunus_persica | Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 |
| pyrus_communis | pycom13g23640 pycom16g23510 |
| rosa_chinensis | RchiOBHm_Chr4g0403601 RchiOBHm_Chr5g0036521 RchiOBHm_Chr5g0046871 |
| rosa_laevigata | RLG00000008967 |
| rosa_multiflora | Rmu_co8193382.1_g000001 Rmu_sc0006376.1_g000016 Rmu_sc0007038.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00348230 |
| rosa_rugosa | Rorug04G0044500 Rorug04G0044600 Rorug04G0044600 |
| rosa_samantha | Rh4AG119600 Rh4AG148500 Rh4BG112800 Rh4BG186000 Rh4CG026500 Rh4CG127600 Rh4DG112300 Rh5BG320700 Rh5CG483800 Rh5DG258300 Rh5DG331400 Rh6AG078400 |
| rosa_wichuraiana | Rw4G009720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 111 |
| AccIII | TCCGGA | 1 cut(s) | 211 |
| AclWI | GGATC | 1 cut(s) | 233 |
| AcoI | YGGCCR | 1 cut(s) | 126 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 199 |
| AjnI | CCWGG | 1 cut(s) | 241 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 140, 172 |
| AluBI | AGCT | 2 cut(s) | 59, 252 |
| AluI | AGCT | 2 cut(s) | 59, 252 |
| AlwI | GGATC | 1 cut(s) | 233 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 59 |
| Aor13HI | TCCGGA | 1 cut(s) | 211 |
| AoxI | GGCC | 1 cut(s) | 126 |
| AspLEI | GCGC | 1 cut(s) | 76 |
| AsuHPI | GGTGA | 1 cut(s) | 245 |
| BalI | TGGCCA | 1 cut(s) | 128 |
| BccI | CCATC | 2 cut(s) | 95, 209 |
| BciT130I | CCWGG | 1 cut(s) | 243 |
| Bme1390I | CCNGG | 1 cut(s) | 243 |
| BmrFI | CCNGG | 1 cut(s) | 243 |
| BmrI | ACTGGG | 1 cut(s) | 208 |
| BmuI | ACTGGG | 1 cut(s) | 208 |
| BsaJI | CCNNGG | 3 cut(s) | 46, 225, 242 |
| BsaWI | WCCGGW | 1 cut(s) | 211 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 199 |
| Bse1I | ACTGG | 1 cut(s) | 203 |
| BseAI | TCCGGA | 1 cut(s) | 211 |
| BseBI | CCWGG | 1 cut(s) | 243 |
| BseDI | CCNNGG | 3 cut(s) | 46, 225, 242 |
| BseGI | GGATG | 2 cut(s) | 106, 220 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 199 |
| BseNI | ACTGG | 1 cut(s) | 203 |
| BshFI | GGCC | 1 cut(s) | 128 |
| BsiSI | CCGG | 1 cut(s) | 212 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 199 |
| BsnI | GGCC | 1 cut(s) | 128 |
| Bsp13I | TCCGGA | 1 cut(s) | 211 |
| Bsp143I | GATC | 1 cut(s) | 238 |
| BspANI | GGCC | 1 cut(s) | 128 |
| BspEI | TCCGGA | 1 cut(s) | 211 |
| BspPI | GGATC | 1 cut(s) | 233 |
| BsrI | ACTGG | 1 cut(s) | 203 |
| BssECI | CCNNGG | 3 cut(s) | 46, 225, 242 |
| BssMI | GATC | 1 cut(s) | 238 |
| BssT1I | CCWWGG | 1 cut(s) | 225 |
| Bst2UI | CCWGG | 1 cut(s) | 243 |
| BstDSI | CCRYGG | 1 cut(s) | 46 |
| BstF5I | GGATG | 2 cut(s) | 106, 220 |
| BstHHI | GCGC | 1 cut(s) | 76 |
| BstKTI | GATC | 1 cut(s) | 241 |
| BstMBI | GATC | 1 cut(s) | 238 |
| BstNI | CCWGG | 1 cut(s) | 243 |
| BstSCI | CCNGG | 1 cut(s) | 241 |
| BstX2I | RGATCY | 1 cut(s) | 238 |
| BstYI | RGATCY | 1 cut(s) | 238 |
| BsuRI | GGCC | 1 cut(s) | 128 |
| BtgI | CCRYGG | 1 cut(s) | 46 |
| BtsCI | GGATG | 2 cut(s) | 106, 220 |
| CaiI | CAGNNNCTG | 1 cut(s) | 59 |
| CfoI | GCGC | 1 cut(s) | 76 |
| CviAII | CATG | 2 cut(s) | 92, 194 |
| CviJI | RGCY | 4 cut(s) | 59, 128, 146, 252 |
| CviKI_1 | RGCY | 4 cut(s) | 59, 128, 146, 252 |
| DpnI | GATC | 1 cut(s) | 240 |
| DpnII | GATC | 1 cut(s) | 238 |
| EaeI | YGGCCR | 1 cut(s) | 126 |
| Eco130I | CCWWGG | 1 cut(s) | 225 |
| EcoRII | CCWGG | 1 cut(s) | 241 |
| EcoT14I | CCWWGG | 1 cut(s) | 225 |
| ErhI | CCWWGG | 1 cut(s) | 225 |
| FaeI | CATG | 2 cut(s) | 95, 197 |
| FaiI | YATR | 7 cut(s) | 93, 111, 125, 161, 163, 165, 195 |
| FatI | CATG | 2 cut(s) | 91, 193 |
| FokI | GGATG | 2 cut(s) | 113, 227 |
| GlaI | GCGC | 1 cut(s) | 75 |
| HaeIII | GGCC | 1 cut(s) | 128 |
| HapII | CCGG | 1 cut(s) | 212 |
| HhaI | GCGC | 1 cut(s) | 76 |
| Hin1II | CATG | 2 cut(s) | 95, 197 |
| Hin6I | GCGC | 1 cut(s) | 74 |
| HinP1I | GCGC | 1 cut(s) | 74 |
| HinfI | GANTC | 1 cut(s) | 174 |
| HpaII | CCGG | 1 cut(s) | 212 |
| HphI | GGTGA | 1 cut(s) | 245 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| Hsp92II | CATG | 2 cut(s) | 95, 197 |
| HspAI | GCGC | 1 cut(s) | 74 |
| Kpn2I | TCCGGA | 1 cut(s) | 211 |
| Kzo9I | GATC | 1 cut(s) | 238 |
| LmnI | GCTCC | 2 cut(s) | 56, 214 |
| LpnPI | CCDG | 5 cut(s) | 39, 184, 225, 228, 255 |
| MalI | GATC | 1 cut(s) | 240 |
| MboI | GATC | 1 cut(s) | 238 |
| MboII | GAAGA | 2 cut(s) | 147, 248 |
| MflI | RGATCY | 1 cut(s) | 238 |
| MlsI | TGGCCA | 1 cut(s) | 128 |
| MluNI | TGGCCA | 1 cut(s) | 128 |
| MlyI | GAGTC | 1 cut(s) | 183 |
| MnlI | CCTC | 3 cut(s) | 9, 91, 223 |
| Mox20I | TGGCCA | 1 cut(s) | 128 |
| MroI | TCCGGA | 1 cut(s) | 211 |
| MscI | TGGCCA | 1 cut(s) | 128 |
| Msp20I | TGGCCA | 1 cut(s) | 128 |
| MspI | CCGG | 1 cut(s) | 212 |
| MspR9I | CCNGG | 1 cut(s) | 243 |
| MvaI | CCWGG | 1 cut(s) | 243 |
| NdeII | GATC | 1 cut(s) | 238 |
| NlaIII | CATG | 2 cut(s) | 95, 197 |
| PleI | GAGTC | 1 cut(s) | 182 |
| PpsI | GAGTC | 1 cut(s) | 182 |
| PsiI | TTATAA | 1 cut(s) | 111 |
| Psp6I | CCWGG | 1 cut(s) | 241 |
| PspGI | CCWGG | 1 cut(s) | 241 |
| PstNI | CAGNNNCTG | 1 cut(s) | 59 |
| PsuI | RGATCY | 1 cut(s) | 238 |
| Sau3AI | GATC | 1 cut(s) | 238 |
| SchI | GAGTC | 1 cut(s) | 183 |
| ScrFI | CCNGG | 1 cut(s) | 243 |
| SetI | ASST | 5 cut(s) | 20, 61, 185, 227, 254 |
| StyD4I | CCNGG | 1 cut(s) | 241 |
| StyI | CCWWGG | 1 cut(s) | 225 |
| TaqI | TCGA | 1 cut(s) | 177 |
| TspDTI | ATGAA | 3 cut(s) | 17, 148, 155 |
| TspGWI | ACGGA | 1 cut(s) | 35 |