Xylose isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57655 AT5G57655 |
| fragaria_vesca | FvH4_4g32520 FvH4_4g32520 FvH4_4g32520 |
| malus_domestica | MD13G1265000.v1.1 MD16G1265900.v1.1 |
| prunus_persica | Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 |
| pyrus_communis | pycom13g23640 pycom16g23510 |
| rosa_chinensis | RchiOBHm_Chr4g0403601 RchiOBHm_Chr5g0036521 RchiOBHm_Chr5g0046871 |
| rosa_laevigata | RLG00000008967 |
| rosa_multiflora | Rmu_co8193382.1_g000001 Rmu_sc0006376.1_g000016 Rmu_sc0007038.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00348230 |
| rosa_rugosa | Rorug04G0044500 Rorug04G0044600 Rorug04G0044600 |
| rosa_samantha | Rh4AG119600 Rh4AG148500 Rh4BG112800 Rh4BG186000 Rh4CG026500 Rh4CG127600 Rh4DG112300 Rh5BG320700 Rh5CG483800 Rh5DG258300 Rh5DG331400 Rh6AG078400 |
| rosa_wichuraiana | Rw4G009720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 261 |
| AcoI | YGGCCR | 1 cut(s) | 276 |
| AcsI | RAATTY | 1 cut(s) | 47 |
| AcuI | CTGAAG | 2 cut(s) | 312, 325 |
| AfaI | GTAC | 1 cut(s) | 327 |
| AluBI | AGCT | 1 cut(s) | 209 |
| AluI | AGCT | 1 cut(s) | 209 |
| Alw21I | GWGCWC | 1 cut(s) | 339 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 209 |
| AoxI | GGCC | 2 cut(s) | 82, 276 |
| ApaI | GGGCCC | 1 cut(s) | 86 |
| ApoI | RAATTY | 1 cut(s) | 47 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 25 |
| AspLEI | GCGC | 1 cut(s) | 226 |
| AspS9I | GGNCC | 2 cut(s) | 82, 83 |
| BaeGI | GKGCMC | 1 cut(s) | 86 |
| BalI | TGGCCA | 1 cut(s) | 278 |
| BanII | GRGCYC | 1 cut(s) | 86 |
| Bbv12I | GWGCWC | 1 cut(s) | 339 |
| BccI | CCATC | 2 cut(s) | 245, 361 |
| BfaI | CTAG | 1 cut(s) | 90 |
| BmgT120I | GGNCC | 2 cut(s) | 82, 83 |
| BmiI | GGNNCC | 2 cut(s) | 84, 85 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 71, 103 |
| BsaJI | CCNNGG | 1 cut(s) | 196 |
| BseDI | CCNNGG | 1 cut(s) | 196 |
| BseGI | GGATG | 1 cut(s) | 256 |
| BseRI | GAGGAG | 2 cut(s) | 143, 146 |
| BseSI | GKGCMC | 1 cut(s) | 86 |
| BshFI | GGCC | 2 cut(s) | 84, 278 |
| BsiHKAI | GWGCWC | 1 cut(s) | 339 |
| BsnI | GGCC | 2 cut(s) | 84, 278 |
| Bsp120I | GGGCCC | 1 cut(s) | 82 |
| Bsp1286I | GDGCHC | 2 cut(s) | 86, 339 |
| BspANI | GGCC | 2 cut(s) | 84, 278 |
| BspLI | GGNNCC | 2 cut(s) | 84, 85 |
| BspQI | GCTCTTC | 1 cut(s) | 344 |
| BssECI | CCNNGG | 1 cut(s) | 196 |
| Bst6I | CTCTTC | 1 cut(s) | 344 |
| BstDSI | CCRYGG | 1 cut(s) | 196 |
| BstF5I | GGATG | 1 cut(s) | 256 |
| BstHHI | GCGC | 1 cut(s) | 226 |
| BstSLI | GKGCMC | 1 cut(s) | 86 |
| BsuRI | GGCC | 2 cut(s) | 84, 278 |
| BtgI | CCRYGG | 1 cut(s) | 196 |
| BtsCI | GGATG | 1 cut(s) | 256 |
| CaiI | CAGNNNCTG | 1 cut(s) | 209 |
| CfoI | GCGC | 1 cut(s) | 226 |
| Cfr13I | GGNCC | 2 cut(s) | 82, 83 |
| Csp6I | GTAC | 1 cut(s) | 326 |
| CviJI | RGCY | 3 cut(s) | 84, 209, 278 |
| CviKI_1 | RGCY | 3 cut(s) | 84, 209, 278 |
| CviQI | GTAC | 1 cut(s) | 326 |
| EaeI | YGGCCR | 1 cut(s) | 276 |
| Eam1104I | CTCTTC | 1 cut(s) | 344 |
| EarI | CTCTTC | 1 cut(s) | 344 |
| Eco24I | GRGCYC | 1 cut(s) | 86 |
| Eco57I | CTGAAG | 2 cut(s) | 312, 325 |
| EcoO109I | RGGNCCY | 2 cut(s) | 82, 83 |
| EcoT38I | GRGCYC | 1 cut(s) | 86 |
| FaiI | YATR | 7 cut(s) | 78, 109, 120, 261, 267, 275, 373 |
| FokI | GGATG | 1 cut(s) | 263 |
| FriOI | GRGCYC | 1 cut(s) | 86 |
| FspBI | CTAG | 1 cut(s) | 90 |
| GlaI | GCGC | 1 cut(s) | 225 |
| HaeIII | GGCC | 2 cut(s) | 84, 278 |
| HhaI | GCGC | 1 cut(s) | 226 |
| Hin6I | GCGC | 1 cut(s) | 224 |
| HinP1I | GCGC | 1 cut(s) | 224 |
| HinfI | GANTC | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 1 cut(s) | 344 |
| Hpy99I | CGWCG | 1 cut(s) | 333 |
| HpyCH4IV | ACGT | 1 cut(s) | 328 |
| HpyCH4V | TGCA | 4 cut(s) | 14, 107, 125, 179 |
| HpySE526I | ACGT | 1 cut(s) | 328 |
| HspAI | GCGC | 1 cut(s) | 224 |
| LguI | GCTCTTC | 1 cut(s) | 344 |
| LmnI | GCTCC | 1 cut(s) | 206 |
| LpnPI | CCDG | 4 cut(s) | 15, 125, 189, 346 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MaeII | ACGT | 1 cut(s) | 328 |
| MboII | GAAGA | 3 cut(s) | 157, 297, 331 |
| MhlI | GDGCHC | 2 cut(s) | 86, 339 |
| MlsI | TGGCCA | 1 cut(s) | 278 |
| MluCI | AATT | 3 cut(s) | 47, 69, 235 |
| MluNI | TGGCCA | 1 cut(s) | 278 |
| MnlI | CCTC | 6 cut(s) | 73, 97, 121, 124, 159, 241 |
| Mox20I | TGGCCA | 1 cut(s) | 278 |
| MroXI | GAANNNNTTC | 1 cut(s) | 25 |
| MscI | TGGCCA | 1 cut(s) | 278 |
| MseI | TTAA | 3 cut(s) | 72, 308, 350 |
| MslI | CAYNNNNRTG | 1 cut(s) | 112 |
| Msp20I | TGGCCA | 1 cut(s) | 278 |
| NlaIV | GGNNCC | 2 cut(s) | 84, 85 |
| PciSI | GCTCTTC | 1 cut(s) | 344 |
| PdmI | GAANNNNTTC | 1 cut(s) | 25 |
| PfeI | GAWTC | 1 cut(s) | 136 |
| PsiI | TTATAA | 1 cut(s) | 261 |
| PspN4I | GGNNCC | 2 cut(s) | 84, 85 |
| PspOMI | GGGCCC | 1 cut(s) | 82 |
| PspPI | GGNCC | 2 cut(s) | 82, 83 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 337, 369 |
| PstNI | CAGNNNCTG | 1 cut(s) | 209 |
| RsaI | GTAC | 1 cut(s) | 327 |
| RsaNI | GTAC | 1 cut(s) | 326 |
| RseI | CAYNNNNRTG | 1 cut(s) | 112 |
| SapI | GCTCTTC | 1 cut(s) | 344 |
| SaqAI | TTAA | 3 cut(s) | 72, 308, 350 |
| Sau96I | GGNCC | 2 cut(s) | 82, 83 |
| SduI | GDGCHC | 2 cut(s) | 86, 339 |
| SetI | ASST | 3 cut(s) | 170, 211, 331 |
| SgeI | CNNG | 9 cut(s) | 23, 42, 102, 116, 152, 209, 216, 292, 344 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 112 |
| Sse9I | AATT | 3 cut(s) | 47, 69, 235 |
| SspI | AATATT | 2 cut(s) | 61, 313 |
| SspMI | CTAG | 1 cut(s) | 90 |
| TaiI | ACGT | 1 cut(s) | 331 |
| TasI | AATT | 3 cut(s) | 47, 69, 235 |
| TfiI | GAWTC | 1 cut(s) | 136 |
| Tru1I | TTAA | 3 cut(s) | 72, 308, 350 |
| Tru9I | TTAA | 3 cut(s) | 72, 308, 350 |
| TspDTI | ATGAA | 4 cut(s) | 17, 21, 167, 314 |
| TspGWI | ACGGA | 1 cut(s) | 185 |
| XapI | RAATTY | 1 cut(s) | 47 |
| XmnI | GAANNNNTTC | 1 cut(s) | 25 |
| XspI | CTAG | 1 cut(s) | 90 |