Xylose isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57655 AT5G57655 |
| fragaria_vesca | FvH4_4g32520 FvH4_4g32520 FvH4_4g32520 |
| malus_domestica | MD13G1265000.v1.1 MD16G1265900.v1.1 |
| prunus_persica | Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 Prupe.1G091900_v2.0.a1 |
| pyrus_communis | pycom13g23640 pycom16g23510 |
| rosa_chinensis | RchiOBHm_Chr4g0403601 RchiOBHm_Chr5g0036521 RchiOBHm_Chr5g0046871 |
| rosa_laevigata | RLG00000008967 |
| rosa_multiflora | Rmu_co8193382.1_g000001 Rmu_sc0006376.1_g000016 Rmu_sc0007038.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00348230 |
| rosa_rugosa | Rorug04G0044500 Rorug04G0044600 Rorug04G0044600 |
| rosa_samantha | Rh4AG119600 Rh4AG148500 Rh4BG112800 Rh4BG186000 Rh4CG026500 Rh4CG127600 Rh4DG112300 Rh5BG320700 Rh5CG483800 Rh5DG258300 Rh5DG331400 Rh6AG078400 |
| rosa_wichuraiana | Rw4G009720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 133 |
| AcsI | RAATTY | 1 cut(s) | 147 |
| AluBI | AGCT | 2 cut(s) | 29, 83 |
| AluI | AGCT | 2 cut(s) | 29, 83 |
| AlwI | GGATC | 1 cut(s) | 133 |
| AoxI | GGCC | 1 cut(s) | 112 |
| ApoI | RAATTY | 1 cut(s) | 147 |
| BccI | CCATC | 1 cut(s) | 16 |
| BclI | TGATCA | 1 cut(s) | 154 |
| BmiI | GGNNCC | 1 cut(s) | 48 |
| BmsI | GCATC | 1 cut(s) | 112 |
| BseGI | GGATG | 1 cut(s) | 157 |
| BseMII | CTCAG | 2 cut(s) | 26, 126 |
| BseRI | GAGGAG | 1 cut(s) | 163 |
| BshFI | GGCC | 1 cut(s) | 114 |
| BsnI | GGCC | 1 cut(s) | 114 |
| Bsp143I | GATC | 2 cut(s) | 138, 154 |
| BspANI | GGCC | 1 cut(s) | 114 |
| BspCNI | CTCAG | 2 cut(s) | 25, 127 |
| BspLI | GGNNCC | 1 cut(s) | 48 |
| BspPI | GGATC | 1 cut(s) | 133 |
| BssMI | GATC | 2 cut(s) | 138, 154 |
| BstC8I | GCNNGC | 1 cut(s) | 127 |
| BstDEI | CTNAG | 2 cut(s) | 12, 135 |
| BstF5I | GGATG | 1 cut(s) | 157 |
| BstKTI | GATC | 2 cut(s) | 141, 157 |
| BstMBI | GATC | 2 cut(s) | 138, 154 |
| BstX2I | RGATCY | 1 cut(s) | 138 |
| BstYI | RGATCY | 1 cut(s) | 138 |
| BsuRI | GGCC | 1 cut(s) | 114 |
| BtsCI | GGATG | 1 cut(s) | 157 |
| Cac8I | GCNNGC | 1 cut(s) | 127 |
| CviJI | RGCY | 3 cut(s) | 29, 83, 114 |
| CviKI_1 | RGCY | 3 cut(s) | 29, 83, 114 |
| DdeI | CTNAG | 2 cut(s) | 12, 135 |
| DpnI | GATC | 2 cut(s) | 140, 156 |
| DpnII | GATC | 2 cut(s) | 138, 154 |
| Eco147I | AGGCCT | 1 cut(s) | 114 |
| FaiI | YATR | 4 cut(s) | 60, 131, 188, 190 |
| FbaI | TGATCA | 1 cut(s) | 154 |
| FokI | GGATG | 1 cut(s) | 144 |
| HaeIII | GGCC | 1 cut(s) | 114 |
| HindIII | AAGCTT | 1 cut(s) | 81 |
| HinfI | GANTC | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 1 cut(s) | 74 |
| Hpy188I | TCNGA | 2 cut(s) | 15, 197 |
| Hpy8I | GTNNAC | 1 cut(s) | 74 |
| HpyAV | CCTTC | 1 cut(s) | 95 |
| HpyF3I | CTNAG | 2 cut(s) | 12, 135 |
| Ksp22I | TGATCA | 1 cut(s) | 154 |
| Kzo9I | GATC | 2 cut(s) | 138, 154 |
| LpnPI | CCDG | 2 cut(s) | 111, 177 |
| LweI | GCATC | 1 cut(s) | 112 |
| MalI | GATC | 2 cut(s) | 140, 156 |
| MboI | GATC | 2 cut(s) | 138, 154 |
| MflI | RGATCY | 1 cut(s) | 138 |
| MluCI | AATT | 1 cut(s) | 147 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MmeI | TCCRAC | 1 cut(s) | 74 |
| MnlI | CCTC | 3 cut(s) | 21, 153, 184 |
| MseI | TTAA | 2 cut(s) | 108, 180 |
| NdeII | GATC | 2 cut(s) | 138, 154 |
| NlaIV | GGNNCC | 1 cut(s) | 48 |
| PceI | AGGCCT | 1 cut(s) | 114 |
| PleI | GAGTC | 1 cut(s) | 164 |
| PpsI | GAGTC | 1 cut(s) | 164 |
| PspN4I | GGNNCC | 1 cut(s) | 48 |
| PsuI | RGATCY | 1 cut(s) | 138 |
| SaqAI | TTAA | 2 cut(s) | 108, 180 |
| Sau3AI | GATC | 2 cut(s) | 138, 154 |
| SchI | GAGTC | 1 cut(s) | 164 |
| SetI | ASST | 5 cut(s) | 31, 85, 106, 166, 195 |
| SfaNI | GCATC | 1 cut(s) | 112 |
| SgeI | CNNG | 6 cut(s) | 31, 81, 128, 138, 156, 176 |
| Sse9I | AATT | 1 cut(s) | 147 |
| SseBI | AGGCCT | 1 cut(s) | 114 |
| StuI | AGGCCT | 1 cut(s) | 114 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TasI | AATT | 1 cut(s) | 147 |
| Tru1I | TTAA | 2 cut(s) | 108, 180 |
| Tru9I | TTAA | 2 cut(s) | 108, 180 |
| XapI | RAATTY | 1 cut(s) | 147 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 40 |