RchiOBHm_Chr6g0264791

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
20122113 .. 20123926
1814 bp
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UTR
Exon/CDS
Intron
PRQ23749

Sequence Viewer

Length: 165 bp
ATGTACATCGGCAAGGATACAAGAACAGATTTTCAAAATCCAGGACCAGTCCACGACAAGCTGCTTCCCTGCATTGTTCTTTCAGGCATTTCTCTGCCCTTTGGATTCCTAACAAGCTTTGAAATGTGCATTGTGGCTTGCTGCTTTGGCACACTTCTGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

5.94

Weight (kDa)

5.0

Isoelectric Point (pI)

19.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 5
AgsI TTSAA 2 cut(s) 35, 122
AjnI CCWGG 1 cut(s) 40
AluBI AGCT 2 cut(s) 61, 117
AluI AGCT 2 cut(s) 61, 117
ApeKI GCWGC 2 cut(s) 61, 141
AspS9I GGNCC 1 cut(s) 44
AvaII GGWCC 1 cut(s) 44
BbvI GCAGC 2 cut(s) 48, 128
BciT130I CCWGG 1 cut(s) 42
BciVI GTATCC 1 cut(s) 10
BfuI GTATCC 1 cut(s) 10
BisI GCNGC 2 cut(s) 62, 142
BlsI GCNGC 2 cut(s) 63, 143
Bme1390I CCNGG 1 cut(s) 42
Bme18I GGWCC 1 cut(s) 44
BmgT120I GGNCC 1 cut(s) 44
BmrFI CCNGG 1 cut(s) 42
Bse1I ACTGG 1 cut(s) 47
BseBI CCWGG 1 cut(s) 42
BseNI ACTGG 1 cut(s) 47
BseXI GCAGC 2 cut(s) 48, 128
Bsp1407I TGTACA 1 cut(s) 3
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 1 cut(s) 47
Bst2UI CCWGG 1 cut(s) 42
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 1 cut(s) 139
BstMWI GCNNNNNNNGC 1 cut(s) 147
BstNI CCWGG 1 cut(s) 42
BstSCI CCNGG 1 cut(s) 40
BstV1I GCAGC 2 cut(s) 48, 128
BsuI GTATCC 1 cut(s) 10
Cac8I GCNNGC 1 cut(s) 139
Cfr13I GGNCC 1 cut(s) 44
Csp6I GTAC 1 cut(s) 4
CviJI RGCY 3 cut(s) 61, 117, 137
CviKI_1 RGCY 3 cut(s) 61, 117, 137
CviQI GTAC 1 cut(s) 4
Eco47I GGWCC 1 cut(s) 44
EcoRII CCWGG 1 cut(s) 40
Fnu4HI GCNGC 2 cut(s) 62, 142
Fsp4HI GCNGC 2 cut(s) 62, 142
GluI GCNGC 2 cut(s) 62, 142
HindIII AAGCTT 1 cut(s) 115
HinfI GANTC 1 cut(s) 105
Hpy166II GTNNAC 1 cut(s) 52
Hpy188III TCNNGA 1 cut(s) 158
Hpy8I GTNNAC 1 cut(s) 52
HpyCH4V TGCA 2 cut(s) 72, 129
HpyF10VI GCNNNNNNNGC 1 cut(s) 147
LpnPI CCDG 6 cut(s) 27, 54, 60, 69, 82, 143
Lsp1109I GCAGC 2 cut(s) 48, 128
MspR9I CCNGG 1 cut(s) 42
MvaI CCWGG 1 cut(s) 42
MwoI GCNNNNNNNGC 1 cut(s) 147
PfeI GAWTC 1 cut(s) 105
PfoI TCCNGGA 1 cut(s) 40
PkrI GCNGC 2 cut(s) 63, 143
Psp6I CCWGG 1 cut(s) 40
PspGI CCWGG 1 cut(s) 40
PspPI GGNCC 1 cut(s) 44
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
SatI GCNGC 2 cut(s) 62, 142
Sau96I GGNCC 1 cut(s) 44
ScrFI CCNGG 1 cut(s) 42
SetI ASST 2 cut(s) 63, 119
SinI GGWCC 1 cut(s) 44
StyD4I CCNGG 1 cut(s) 40
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 1 cut(s) 105
TseI GCWGC 2 cut(s) 61, 141
VpaK11BI GGWCC 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.