Rh2BG172800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
15182948 .. 15185180
2233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG172800.1

Sequence Viewer

Length: 291 bp
ATGCTGGTTGTTTATGTAATTGATTCAGTCCACGACAAGCTGCTTCCCTGCATTGTTCTTTCAGGCATTTCTCTGCCCTTTGGATTCCTAACAAGCTTTGAAATGTGCATTAATTGTGGCTTGCTGCTTTGGCACACTTCTGGAATAATGAAGGTATTACTGATTATATCAGATGAGGGAGATGACTGTCCCATGACCAAGCTGCCAGAAATCAACTTTGAGGCTCTGTTTTGGTGCAAAACTCCTAGAGAAATGAAGCTTATTTTTAGGCTCATGTTGTTATTACGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

96

Amino Acids

10.99

Weight (kDa)

5.53

Isoelectric Point (pI)

19.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 101
AluBI AGCT 4 cut(s) 40, 96, 202, 259
AluI AGCT 4 cut(s) 40, 96, 202, 259
ApeKI GCWGC 3 cut(s) 40, 124, 202
AseI ATTAAT 1 cut(s) 111
BbvI GCAGC 3 cut(s) 27, 111, 189
BfaI CTAG 1 cut(s) 246
BisI GCNGC 3 cut(s) 41, 125, 203
BlsI GCNGC 3 cut(s) 42, 126, 204
BseXI GCAGC 3 cut(s) 27, 111, 189
BslFI GGGAC 1 cut(s) 174
BsmFI GGGAC 1 cut(s) 174
Bst4CI ACNGT 1 cut(s) 188
BstC8I GCNNGC 1 cut(s) 122
BstMWI GCNNNNNNNGC 1 cut(s) 130
BstV1I GCAGC 3 cut(s) 27, 111, 189
Cac8I GCNNGC 1 cut(s) 122
CviAII CATG 2 cut(s) 193, 274
CviJI RGCY 7 cut(s) 40, 96, 120, 202, 224, 259, 271
CviKI_1 RGCY 7 cut(s) 40, 96, 120, 202, 224, 259, 271
FaeI CATG 2 cut(s) 196, 277
FaiI YATR 4 cut(s) 15, 167, 194, 275
FaqI GGGAC 1 cut(s) 174
FatI CATG 2 cut(s) 192, 273
Fnu4HI GCNGC 3 cut(s) 41, 125, 203
Fsp4HI GCNGC 3 cut(s) 41, 125, 203
FspBI CTAG 1 cut(s) 246
GluI GCNGC 3 cut(s) 41, 125, 203
Hin1II CATG 2 cut(s) 196, 277
HindIII AAGCTT 2 cut(s) 94, 257
HinfI GANTC 2 cut(s) 23, 84
Hpy166II GTNNAC 1 cut(s) 31
Hpy188I TCNGA 1 cut(s) 172
Hpy188III TCNNGA 1 cut(s) 141
Hpy8I GTNNAC 1 cut(s) 31
HpyAV CCTTC 1 cut(s) 145
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4IV ACGT 1 cut(s) 286
HpyCH4V TGCA 3 cut(s) 51, 108, 237
HpyF10VI GCNNNNNNNGC 1 cut(s) 130
HpySE526I ACGT 1 cut(s) 286
Hsp92II CATG 2 cut(s) 196, 277
LpnPI CCDG 4 cut(s) 48, 61, 126, 219
Lsp1109I GCAGC 3 cut(s) 27, 111, 189
MaeI CTAG 1 cut(s) 246
MaeII ACGT 1 cut(s) 286
MluCI AATT 2 cut(s) 18, 112
MnlI CCTC 2 cut(s) 169, 214
MseI TTAA 1 cut(s) 111
MwoI GCNNNNNNNGC 1 cut(s) 130
NlaIII CATG 2 cut(s) 196, 277
PfeI GAWTC 2 cut(s) 23, 84
PkrI GCNGC 3 cut(s) 42, 126, 204
PshBI ATTAAT 1 cut(s) 111
SaqAI TTAA 1 cut(s) 111
SatI GCNGC 3 cut(s) 41, 125, 203
SetI ASST 6 cut(s) 42, 98, 156, 204, 261, 289
Sse9I AATT 2 cut(s) 18, 112
SspMI CTAG 1 cut(s) 246
TaaI ACNGT 1 cut(s) 188
TaiI ACGT 1 cut(s) 289
TasI AATT 2 cut(s) 18, 112
TfiI GAWTC 2 cut(s) 23, 84
Tru1I TTAA 1 cut(s) 111
Tru9I TTAA 1 cut(s) 111
TseI GCWGC 3 cut(s) 40, 124, 202
TspDTI ATGAA 2 cut(s) 164, 269
VspI ATTAAT 1 cut(s) 111
XspI CTAG 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.