No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0439061 RchiOBHm_Chr5g0047911 RchiOBHm_Chr6g0264791 |
| rosa_laevigata | RLG00000000810 RLG00000021002 |
| rosa_multiflora | Rmu_sc0005631.1_g000015 Rmu_sc0009313.1_g000010 Rmu_sc0027765.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00033810 Rroxscaffold_1G00048710 Rroxscaffold_6G00411730 Rroxscaffold_7G00170630 |
| rosa_samantha | Rh1CG263500 Rh2AG165500 Rh2AG302200 Rh2BG172800 Rh2CG442100 Rh2DG061100 Rh2DG171100 Rh2DG326200 Rh4BG177600 Rh5CG486200 Rh5DG271800 Rh5DG336200 Rh7BG323100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 41 |
| AluBI | AGCT | 2 cut(s) | 142, 199 |
| AluI | AGCT | 2 cut(s) | 142, 199 |
| ApeKI | GCWGC | 2 cut(s) | 64, 142 |
| AseI | ATTAAT | 1 cut(s) | 51 |
| BbvI | GCAGC | 2 cut(s) | 51, 129 |
| BfaI | CTAG | 1 cut(s) | 186 |
| BisI | GCNGC | 2 cut(s) | 65, 143 |
| BlsI | GCNGC | 2 cut(s) | 66, 144 |
| BseGI | GGATG | 1 cut(s) | 28 |
| BseXI | GCAGC | 2 cut(s) | 51, 129 |
| BslFI | GGGAC | 1 cut(s) | 114 |
| BsmFI | GGGAC | 1 cut(s) | 114 |
| Bst4CI | ACNGT | 1 cut(s) | 128 |
| BstC8I | GCNNGC | 1 cut(s) | 62 |
| BstF5I | GGATG | 1 cut(s) | 28 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 70 |
| BstV1I | GCAGC | 2 cut(s) | 51, 129 |
| BtsCI | GGATG | 1 cut(s) | 28 |
| Cac8I | GCNNGC | 1 cut(s) | 62 |
| CviAII | CATG | 2 cut(s) | 133, 214 |
| CviJI | RGCY | 6 cut(s) | 36, 60, 142, 164, 199, 211 |
| CviKI_1 | RGCY | 6 cut(s) | 36, 60, 142, 164, 199, 211 |
| FaeI | CATG | 2 cut(s) | 136, 217 |
| FaiI | YATR | 5 cut(s) | 14, 28, 107, 134, 215 |
| FaqI | GGGAC | 1 cut(s) | 114 |
| FatI | CATG | 2 cut(s) | 132, 213 |
| Fnu4HI | GCNGC | 2 cut(s) | 65, 143 |
| FokI | GGATG | 1 cut(s) | 35 |
| Fsp4HI | GCNGC | 2 cut(s) | 65, 143 |
| FspBI | CTAG | 1 cut(s) | 186 |
| GluI | GCNGC | 2 cut(s) | 65, 143 |
| Hin1II | CATG | 2 cut(s) | 136, 217 |
| HindIII | AAGCTT | 1 cut(s) | 197 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 112 |
| Hpy188III | TCNNGA | 1 cut(s) | 81 |
| HpyAV | CCTTC | 1 cut(s) | 85 |
| HpyCH4III | ACNGT | 1 cut(s) | 128 |
| HpyCH4IV | ACGT | 1 cut(s) | 226 |
| HpyCH4V | TGCA | 2 cut(s) | 48, 177 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 70 |
| HpySE526I | ACGT | 1 cut(s) | 226 |
| Hsp92II | CATG | 2 cut(s) | 136, 217 |
| LpnPI | CCDG | 2 cut(s) | 66, 159 |
| Lsp1109I | GCAGC | 2 cut(s) | 51, 129 |
| MaeI | CTAG | 1 cut(s) | 186 |
| MaeII | ACGT | 1 cut(s) | 226 |
| MluCI | AATT | 2 cut(s) | 5, 52 |
| MnlI | CCTC | 3 cut(s) | 26, 109, 154 |
| MseI | TTAA | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 70 |
| NlaIII | CATG | 2 cut(s) | 136, 217 |
| PkrI | GCNGC | 2 cut(s) | 66, 144 |
| PshBI | ATTAAT | 1 cut(s) | 51 |
| SaqAI | TTAA | 1 cut(s) | 51 |
| SatI | GCNGC | 2 cut(s) | 65, 143 |
| SetI | ASST | 4 cut(s) | 96, 144, 201, 229 |
| SgeI | CNNG | 7 cut(s) | 73, 93, 145, 151, 158, 198, 226 |
| Sse9I | AATT | 2 cut(s) | 5, 52 |
| SspMI | CTAG | 1 cut(s) | 186 |
| TaaI | ACNGT | 1 cut(s) | 128 |
| TaiI | ACGT | 1 cut(s) | 229 |
| TasI | AATT | 2 cut(s) | 5, 52 |
| Tru1I | TTAA | 1 cut(s) | 51 |
| Tru9I | TTAA | 1 cut(s) | 51 |
| TseI | GCWGC | 2 cut(s) | 64, 142 |
| TspDTI | ATGAA | 3 cut(s) | 17, 104, 209 |
| VspI | ATTAAT | 1 cut(s) | 51 |
| XspI | CTAG | 1 cut(s) | 186 |