Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001895

Physical Location & Seq

Genomic Coordinates Reverse (-)

8898534 .. 8905036

Gene Structure 6503 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000987

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGAGCTGAGGCAGGAGCTTCAGGGACGCCGAATAACTTGTGAACACCTAACACAGCGTGCTCTTGAAGCTCAGGTTGAAAAAGATAAACTGGCCATGAAAATTGAAGCCTTCCGAAATGGTAAATCTTGGGATGAGATTGACTCCAATCCAGTTCAGGAATATGACATGCTGAAAACTTATGTATCGAAAATTCAAGAGTTAGAAGGGGAATTGTTATGCTTGAAAAACTCACAAAGCAGGAGACTTGTTGACTGTGTAGAGGCGGATGGTGATGGCTTTCACTCAAACAACATATTATTCCCCTGTAATGATGAATATTCATCTGATTACGATACCAAAGCTGGGGATGTTTCTGATGTGATAGATGTAGAAAAAGAGCAAGAACATTCTTCTCTTCAAGAAAAACTGGATCGGGAGCTGAAAGAATTGGACAAAGCTCTCGAGCAAAAGGAGGCTGAAATGAAGCGGTTTACAAGTTCTGATACCTCAGTTCTTAAGCTGTATGAGAAGAAGGTTCATGAGTTAGAACATGAGAAGAAAGCCCTTCAGAGAGAGATTGAAGAGTTGAGACAAAATCTTTCAAATATCTCATCTACTTCTGGGGATGGTGCTCAAAAGTTAAAGGAGGATTATCTACACAAGTTGAACCTTGTTGAAGGACAGGTTTCTGAGCTGAAAAAGAAACAGGATGCTCAAGCCCAATTGTTGAGACAAAAACAAAAAAGCGATGAGGCTGCAAGGAGACTACAGGATGAAATTCAGAGAATAAAGACTCAAAAGGAGTCTGAGCAGTTTAGATTATGGAAAGCATCACGAGAAAAAGAAGTTCTTCAGCTTAAGAAAGAGGGAAGGAGGAATGAGTATGAGATGCATAAGCTGTTAGCTTTAAACCAGGGGCAAAAAATGGTTTTGCAACGAAAGACAGAAGAAGCTAATACGGCCACAAAAAAGCTAAAGGAGCTTTTAGAATCCAGAAAGACTTCTTCACGTGAAACTTCTGGTCATAATGCTCATGGTATTCAGGCTCTGATGCAGGCAATCGAACTTGAGCTTGAAGTCACAGTTAAGACTCATGAAGTAAGATCTGAGTATGAGCGGCAAATTGAAGAGCGTGCTATGATGGCCAAGGAAAGAACCAAGCTAATAGAAGAACAACGTAATTTAAGTGATTCCTCAGAAATAATGTCTCCTGGTGCAAGAAATTCAAGGATTTTTGCACTTGAAAACATGCTTGCTACTTCTTCTAGCACCATGGTATCTATGGCATCACAATTGTCAGAAGCAGAAGAGCGCGAGCGGGGTTTCAATGGCAGGGGGCGTTGGAATCAAGTTCGGTCTCTTACAGATGCCAAATTTTTGAGGAATCATCTGTTCAACTTAGCTTCTTCCTCCAGGTGCCTGTTACGAGATAAAGAAGTTGCATACAGAGAGAAGGATTTGGAAATAAGAGATTTGAAGGAAAAAGTAGTAAGCCTCAGTAGTTCGCTCAGGAAGTTGGAGAATAAGAATGCTGAACTTATGCATCAGGGATTCAATGCGCAAAGTACTAATGACTCTGGAGGCTTCAAGTTAGATAGTGCTGGTGAGGGGATAGTCAGTGTTGTGAAGAAAAGCGAGTCGGGCGTATGCTGCTCTTGTAGCAAGACTTCCTCCTACAAAACAACTAAATGTCAATGTCGAACTACTGGAGGAGCCTGTGGGCCATCATGTGGTTGTGTGCCTGCTAAGTGTTCAAATAGAGAATCCAGCCTAGTTGAGGTACATGGGTCTCCAGAAGGAGAAACTGCTCAAGGAATTGGAAATGATGAAGGCACTGATGAAACAGAGAAGAGTCAGCATCTTGCTTCTCAGGGTGCCAGGTTACTTCAGAATGCATTAGTTGAGAGGCCTAGTGAAACAACTGATGATGGTGGACCAAGAAGGAAAGCTCTTTCAGAGATCGGAAATACGTTGGCCAAATCCAATGCGCCGAAGCCTAACCAGAGAAAGAAATGGCGAAGAACCACAATCCAACTGGTTACAAATGCTCCGCCTCCCTCGCAGCCAGCAACTGCTGAAGCACCTCAAAGGCCAGATAAAGGGGCACCAGAGGTACCCATCCCTATGAAGCTTCCTCAAGGGGCAGATAAAGGGGCACCAGAGGCACCCATCCCTATGAAGCTTCCTAGGGCAATGCGATCAGCTGCATCAAATGGTGGCAACTTATTTAGAGAAAGGAATTCTGATAAAGCAGATCAATCTGGTGTCAATAAGGAGGCCGGTGTTCCTGCTCCAAGAAGTCCTCTGCGGCAGAACAAAACATCAGATGAGAAGGAGAACTGTGGCCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0008574 GO:0009506 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030054 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0055044 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

778

Amino Acids

87.21

Weight (kDa)

7.8

Isoelectric Point (pI)

53.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KIF21A_4th	PF25764	117 - 283	1.1e-42	KIF21A-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60930 AT5G60930 AT5G60930
fragaria_vesca	FvH4_5g35340
malus_domestica	MD08G1198000.v1.1 MD15G1385300.v1.1
prunus_persica	Prupe.1G532000_v2.0.a1 Prupe.1G532000_v2.0.a1 Prupe.1G532000_v2.0.a1 Prupe.1G532000_v2.0.a1
pyrus_communis	pycom08g17020 pycom15g07240 pycom15g34540
rosa_chinensis	RchiOBHm_Chr3g0494071 RchiOBHm_Chr7g0236541 RchiOBHm_Chr7g0236581 RchiOBHm_Chr7g0236691
rosa_laevigata	RLG00000000987 RLG00000000988 RLG00000001068 RLG00000001077 RLG00000001104
rosa_multiflora	Rmu_sc0002536.1_g000016 Rmu_sc0003720.1_g000010 Rmu_sc0011298.1_g000005 Rmu_ssc0000050.1_g000117
rosa_roxburghii	Rroxscaffold_3G00224960 Rroxscaffold_6G00429280
rosa_rugosa	Rorug07G0291900 Rorug07G0291900 Rorug07G0297600 Rorug07G0297700 Rorug07G0298200
rosa_samantha	Rh2CG391900 Rh7AG453300 Rh7AG453600 Rh7BG401100 Rh7BG418700 Rh7BG424500 Rh7CG471900 Rh7CG472100 Rh7DG438700 Rh7DG440900 Rh7DG441000
rosa_wichuraiana	Rw0G020690 Rw7G037620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1542
Acc65I	GGTACC	1 cut(s)	2095
AccB1I	GGYRCC	6 cut(s)	1398, 1856, 2086, 2095, 2137, 2146
AccB7I	CCANNNNNTGG	1 cut(s)	1712
AccBSI	CCGCTC	2 cut(s)	1099, 1300
AccII	CGCG	1 cut(s)	1296
AciI	CCGC	6 cut(s)	266, 469, 1099, 1300, 2033, 2290
AclWI	GGATC	1 cut(s)	420
AcoI	YGGCCR	4 cut(s)	93, 942, 1125, 1956
AcsI	RAATTY	5 cut(s)	192, 759, 1204, 1355, 2221
AcuI	CTGAAG	5 cut(s)	5, 533, 818, 1853, 2079
AcvI	CACGTG	1 cut(s)	992
AcyI	GRCGYC	1 cut(s)	28
AdeI	CACNNNGTG	1 cut(s)	59
AfaI	GTAC	3 cut(s)	1549, 1764, 2097
AfiI	CCNNNNNNNGG	4 cut(s)	345, 1712, 1759, 2081
AflII	CTTAAG	2 cut(s)	497, 839
AjnI	CCWGG	4 cut(s)	894, 1192, 1394, 1859
Alw21I	GWGCWC	2 cut(s)	64, 616
Alw26I	GTCTC	7 cut(s)	238, 565, 706, 739, 1194, 1344, 1776
AlwI	GGATC	1 cut(s)	420
AlwNI	CAGNNNCTG	2 cut(s)	1030, 2054
Ama87I	CYCGRG	1 cut(s)	443
AoxI	GGCC	9 cut(s)	93, 942, 1125, 1703, 1889, 1956, 2072, 2259, 2326
ApeKI	GCWGC	4 cut(s)	737, 1632, 2044, 2186
ApoI	RAATTY	5 cut(s)	192, 759, 1204, 1355, 2221
Asp700I	GAANNNNTTC	2 cut(s)	831, 982
Asp718I	GGTACC	1 cut(s)	2095
AspA2I	CCTAGG	1 cut(s)	2168
AspLEI	GCGC	3 cut(s)	1296, 1543, 1972
AspS9I	GGNCC	2 cut(s)	1703, 1916
AsuHPI	GGTGA	2 cut(s)	284, 1598
AvaI	CYCGRG	1 cut(s)	443
AvaII	GGWCC	1 cut(s)	1916
AvrII	CCTAGG	1 cut(s)	2168
BaeGI	GKGCMC	2 cut(s)	2089, 2140
BaeI	ACNNNNGTAYC	8 cut(s)	168, 201, 477, 510, 1242, 1275, 1754, 1787
BalI	TGGCCA	3 cut(s)	95, 1127, 1958
BanI	GGYRCC	6 cut(s)	1398, 1856, 2086, 2095, 2137, 2146
BarI	GAAGNNNNNNTAC	2 cut(s)	1633, 1665
BauI	CACGAG	1 cut(s)	816
BbrPI	CACGTG	1 cut(s)	992
Bbv12I	GWGCWC	2 cut(s)	64, 616
BbvCI	CCTCAGC	1 cut(s)	8
BbvI	GCAGC	4 cut(s)	724, 1619, 2056, 2173
BccI	CCATC	8 cut(s)	263, 269, 602, 1117, 1714, 1904, 2108, 2159
BceAI	ACGGC	1 cut(s)	957
BcgI	CGANNNNNNTGC	2 cut(s)	719, 753
BciT130I	CCWGG	4 cut(s)	896, 1194, 1396, 1861
BcoDI	GTCTC	7 cut(s)	238, 565, 706, 739, 1194, 1344, 1776
BfaI	CTAG	4 cut(s)	1248, 1754, 1893, 2169
BfmI	CTRYAG	1 cut(s)	749
BfrI	CTTAAG	2 cut(s)	497, 839
BglII	AGATCT	1 cut(s)	1085
BisI	GCNGC	6 cut(s)	738, 1100, 1633, 2045, 2187, 2291
BlnI	CCTAGG	1 cut(s)	2168
BlsI	GCNGC	6 cut(s)	739, 1101, 1634, 2046, 2188, 2292
BmcAI	AGTACT	1 cut(s)	1549
Bme1390I	CCNGG	4 cut(s)	896, 1194, 1396, 1861
Bme18I	GGWCC	1 cut(s)	1916
BmeT110I	CYCGRG	1 cut(s)	443
BmgT120I	GGNCC	2 cut(s)	1703, 1916
BmiI	GGNNCC	7 cut(s)	1400, 1696, 1858, 2088, 2097, 2139, 2148
BmrFI	CCNGG	4 cut(s)	896, 1194, 1396, 1861
BmsI	GCATC	9 cut(s)	682, 821, 861, 1023, 1277, 1339, 1534, 1849, 2198
BplI	GAGNNNNNCTC	2 cut(s)	128, 160
BpmI	CTGGAG	4 cut(s)	1378, 1581, 1710, 1758
Bpu10I	CCTNAGC	3 cut(s)	8, 72, 1490
BpuEI	CTTGAG	4 cut(s)	681, 1070, 1776, 2103
BsaAI	YACGTR	1 cut(s)	992
BsaHI	GRCGYC	1 cut(s)	28
BsaI	GGTCTC	2 cut(s)	1344, 1776
BsaJI	CCNNGG	4 cut(s)	895, 1128, 1254, 2168
BsaXI	ACNNNNNCTCC	2 cut(s)	2014, 2044
Bsc4I	CCNNNNNNNGG	4 cut(s)	345, 1712, 1759, 2081
Bse118I	RCCGGY	1 cut(s)	2261
Bse1I	ACTGG	5 cut(s)	96, 152, 414, 1693, 2022
Bse3DI	GCAATG	1 cut(s)	2181
BseBI	CCWGG	4 cut(s)	896, 1194, 1396, 1861
BseDI	CCNNGG	4 cut(s)	895, 1128, 1254, 2168
BseGI	GGATG	8 cut(s)	139, 274, 355, 613, 697, 760, 2100, 2151
BseLI	CCNNNNNNNGG	4 cut(s)	345, 1712, 1759, 2081
BseMI	GCAATG	1 cut(s)	2181
BseMII	CTCAG	9 cut(s)	86, 504, 663, 780, 1080, 1191, 1492, 1504, 1865
BseNI	ACTGG	5 cut(s)	96, 152, 414, 1693, 2022
BseRI	GAGGAG	1 cut(s)	1707
BseSI	GKGCMC	2 cut(s)	2089, 2140
BseXI	GCAGC	4 cut(s)	724, 1619, 2056, 2173
BseYI	CCCAGC	1 cut(s)	344
Bsh1236I	CGCG	1 cut(s)	1296
BshFI	GGCC	9 cut(s)	95, 944, 1127, 1705, 1891, 1958, 2074, 2261, 2328
BshNI	GGYRCC	6 cut(s)	1398, 1856, 2086, 2095, 2137, 2146
BsiHKAI	GWGCWC	2 cut(s)	64, 616
BsiHKCI	CYCGRG	1 cut(s)	443
BsiSI	CCGG	1 cut(s)	2262
BslFI	GGGAC	1 cut(s)	39
BslI	CCNNNNNNNGG	4 cut(s)	345, 1712, 1759, 2081
BsmAI	GTCTC	7 cut(s)	238, 565, 706, 739, 1194, 1344, 1776
BsmFI	GGGAC	1 cut(s)	39
BsmI	GAATGC	2 cut(s)	1516, 1879
BsnI	GGCC	9 cut(s)	95, 944, 1127, 1705, 1891, 1958, 2074, 2261, 2328
Bso31I	GGTCTC	2 cut(s)	1344, 1776
BsoBI	CYCGRG	1 cut(s)	443
Bsp1286I	GDGCHC	4 cut(s)	64, 616, 2089, 2140
Bsp143I	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
Bsp19I	CCATGG	1 cut(s)	1254
BspACI	CCGC	6 cut(s)	266, 469, 1099, 1300, 2033, 2290
BspANI	GGCC	9 cut(s)	95, 944, 1127, 1705, 1891, 1958, 2074, 2261, 2328
BspCNI	CTCAG	9 cut(s)	85, 503, 664, 781, 1081, 1190, 1491, 1503, 1864
BspFNI	CGCG	1 cut(s)	1296
BspHI	TCATGA	2 cut(s)	520, 1075
BspLI	GGNNCC	7 cut(s)	1400, 1696, 1858, 2088, 2097, 2139, 2148
BspPI	GGATC	1 cut(s)	420
BspQI	GCTCTTC	2 cut(s)	1104, 1284
BspT107I	GGYRCC	6 cut(s)	1398, 1856, 2086, 2095, 2137, 2146
BspTI	CTTAAG	2 cut(s)	497, 839
BspTNI	GGTCTC	2 cut(s)	1344, 1776
BsrBI	CCGCTC	2 cut(s)	1099, 1300
BsrDI	GCAATG	1 cut(s)	2181
BsrFI	RCCGGY	1 cut(s)	2261
BsrI	ACTGG	5 cut(s)	96, 152, 414, 1693, 2022
BssAI	RCCGGY	1 cut(s)	2261
BssECI	CCNNGG	4 cut(s)	895, 1128, 1254, 2168
BssMI	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
BssNI	GRCGYC	1 cut(s)	28
BssSI	CACGAG	1 cut(s)	816
BssT1I	CCWWGG	3 cut(s)	1128, 1254, 2168
Bst2BI	CACGAG	1 cut(s)	816
Bst2UI	CCWGG	4 cut(s)	896, 1194, 1396, 1861
Bst4CI	ACNGT	3 cut(s)	257, 1066, 2324
Bst6I	CTCTTC	5 cut(s)	402, 558, 1104, 1284, 1826
BstACI	GRCGYC	1 cut(s)	28
BstAFI	CTTAAG	2 cut(s)	497, 839
BstBAI	YACGTR	1 cut(s)	992
BstC8I	GCNNGC	7 cut(s)	60, 1038, 1116, 1236, 1298, 1725, 2049
BstDSI	CCRYGG	1 cut(s)	1254
BstENI	CCTNNNNNAGG	1 cut(s)	1757
BstF5I	GGATG	8 cut(s)	139, 274, 355, 613, 697, 760, 2100, 2151
BstFNI	CGCG	1 cut(s)	1296
BstHHI	GCGC	3 cut(s)	1296, 1543, 1972
BstKTI	GATC	5 cut(s)	415, 1088, 1944, 2183, 2239
BstMAI	GTCTC	7 cut(s)	238, 565, 706, 739, 1194, 1344, 1776
BstMBI	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
BstMWI	GCNNNNNNNGC	9 cut(s)	68, 941, 961, 1124, 1623, 1632, 1641, 2041, 2144
BstNI	CCWGG	4 cut(s)	896, 1194, 1396, 1861
BstNSI	RCATGY	2 cut(s)	172, 1234
BstSCI	CCNGG	4 cut(s)	894, 1192, 1394, 1859
BstSFI	CTRYAG	1 cut(s)	749
BstSLI	GKGCMC	2 cut(s)	2089, 2140
BstUI	CGCG	1 cut(s)	1296
BstV1I	GCAGC	4 cut(s)	724, 1619, 2056, 2173
BstX2I	RGATCY	1 cut(s)	1085
BstYI	RGATCY	1 cut(s)	1085
BsuRI	GGCC	9 cut(s)	95, 944, 1127, 1705, 1891, 1958, 2074, 2261, 2328
BtgI	CCRYGG	1 cut(s)	1254
BtgZI	GCGATG	1 cut(s)	744
BtsCI	GGATG	8 cut(s)	139, 274, 355, 613, 697, 760, 2100, 2151
BtsIMutI	CAGTG	2 cut(s)	1606, 1815
Cac8I	GCNNGC	7 cut(s)	60, 1038, 1116, 1236, 1298, 1725, 2049
CaiI	CAGNNNCTG	2 cut(s)	1030, 2054
CciI	TCATGA	2 cut(s)	520, 1075
CfoI	GCGC	3 cut(s)	1296, 1543, 1972
Cfr10I	RCCGGY	1 cut(s)	2261
Cfr13I	GGNCC	2 cut(s)	1703, 1916
CseI	GACGC	1 cut(s)	36
Csp6I	GTAC	3 cut(s)	1548, 1763, 2096
CviQI	GTAC	3 cut(s)	1548, 1763, 2096
DpnI	GATC	5 cut(s)	414, 1087, 1943, 2182, 2238
DpnII	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
DraI	TTTAAA	1 cut(s)	891
DraIII	CACNNNGTG	1 cut(s)	59
EaeI	YGGCCR	4 cut(s)	93, 942, 1125, 1956
Eam1104I	CTCTTC	5 cut(s)	402, 558, 1104, 1284, 1826
EarI	CTCTTC	5 cut(s)	402, 558, 1104, 1284, 1826
EciI	GGCGGA	2 cut(s)	281, 2022
Eco130I	CCWWGG	3 cut(s)	1128, 1254, 2168
Eco147I	AGGCCT	1 cut(s)	1891
Eco31I	GGTCTC	2 cut(s)	1344, 1776
Eco47I	GGWCC	1 cut(s)	1916
Eco57I	CTGAAG	5 cut(s)	5, 533, 818, 1853, 2079
Eco72I	CACGTG	1 cut(s)	992
Eco88I	CYCGRG	1 cut(s)	443
EcoNI	CCTNNNNNAGG	1 cut(s)	1757
EcoRI	GAATTC	1 cut(s)	2221
EcoRII	CCWGG	4 cut(s)	894, 1192, 1394, 1859
EcoT14I	CCWWGG	3 cut(s)	1128, 1254, 2168
EcoT22I	ATGCAT	3 cut(s)	876, 1527, 1879
ErhI	CCWWGG	3 cut(s)	1128, 1254, 2168
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FaqI	GGGAC	1 cut(s)	39
FauI	CCCGC	1 cut(s)	1293
Fnu4HI	GCNGC	6 cut(s)	738, 1100, 1633, 2045, 2187, 2291
FokI	GGATG	8 cut(s)	146, 281, 362, 620, 704, 767, 2087, 2138
Fsp4HI	GCNGC	6 cut(s)	738, 1100, 1633, 2045, 2187, 2291
FspBI	CTAG	4 cut(s)	1248, 1754, 1893, 2169
FspI	TGCGCA	1 cut(s)	1542
GlaI	GCGC	3 cut(s)	1295, 1542, 1971
GluI	GCNGC	6 cut(s)	738, 1100, 1633, 2045, 2187, 2291
GsaI	CCCAGC	1 cut(s)	348
GsuI	CTGGAG	4 cut(s)	1378, 1581, 1710, 1758
HaeIII	GGCC	9 cut(s)	95, 944, 1127, 1705, 1891, 1958, 2074, 2261, 2328
HapII	CCGG	1 cut(s)	2262
HgaI	GACGC	1 cut(s)	36
HhaI	GCGC	3 cut(s)	1296, 1543, 1972
Hin1I	GRCGYC	1 cut(s)	28
Hin6I	GCGC	3 cut(s)	1294, 1541, 1970
HinP1I	GCGC	3 cut(s)	1294, 1541, 1970
HincII	GTYRAC	1 cut(s)	253
HindII	GTYRAC	1 cut(s)	253
HindIII	AAGCTT	2 cut(s)	2111, 2162
HpaII	CCGG	1 cut(s)	2262
HphI	GGTGA	2 cut(s)	284, 1598
Hpy166II	GTNNAC	4 cut(s)	44, 253, 474, 1916
Hpy8I	GTNNAC	4 cut(s)	44, 253, 474, 1916
HpyCH4III	ACNGT	3 cut(s)	257, 1066, 2324
HpyCH4IV	ACGT	3 cut(s)	991, 1159, 1952
HpyF10VI	GCNNNNNNNGC	9 cut(s)	68, 941, 961, 1124, 1623, 1632, 1641, 2041, 2144
HpySE526I	ACGT	3 cut(s)	991, 1159, 1952
Hsp92I	GRCGYC	1 cut(s)	28
HspAI	GCGC	3 cut(s)	1294, 1541, 1970
KpnI	GGTACC	1 cut(s)	2099
Kzo9I	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
LguI	GCTCTTC	2 cut(s)	1104, 1284
LmnI	GCTCC	7 cut(s)	4, 16, 418, 961, 1694, 2035, 2278
Lsp1109I	GCAGC	4 cut(s)	724, 1619, 2056, 2173
LweI	GCATC	9 cut(s)	682, 821, 861, 1023, 1277, 1339, 1534, 1849, 2198
MaeI	CTAG	4 cut(s)	1248, 1754, 1893, 2169
MaeII	ACGT	3 cut(s)	991, 1159, 1952
MaeIII	GTNAC	4 cut(s)	1060, 1404, 1863, 2020
MalI	GATC	5 cut(s)	414, 1087, 1943, 2182, 2238
MbiI	CCGCTC	2 cut(s)	1099, 1300
MboI	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
MfeI	CAATTG	2 cut(s)	704, 1274
MflI	RGATCY	1 cut(s)	1085
MhlI	GDGCHC	4 cut(s)	64, 616, 2089, 2140
MlsI	TGGCCA	3 cut(s)	95, 1127, 1958
MluNI	TGGCCA	3 cut(s)	95, 1127, 1958
MlyI	GAGTC	7 cut(s)	137, 769, 794, 1066, 1550, 1628, 1843
MmeI	TCCRAC	3 cut(s)	1304, 1479, 2038
Mox20I	TGGCCA	3 cut(s)	95, 1127, 1958
Mph1103I	ATGCAT	3 cut(s)	876, 1527, 1879
MroXI	GAANNNNTTC	2 cut(s)	831, 982
MscI	TGGCCA	3 cut(s)	95, 1127, 1958
MseI	TTAA	7 cut(s)	498, 623, 840, 890, 1068, 1166, 2332
MslI	CAYNNNNRTG	2 cut(s)	2105, 2156
Msp20I	TGGCCA	3 cut(s)	95, 1127, 1958
MspA1I	CMGCKG	1 cut(s)	2186
MspCI	CTTAAG	2 cut(s)	497, 839
MspI	CCGG	1 cut(s)	2262
MspR9I	CCNGG	4 cut(s)	896, 1194, 1396, 1861
MunI	CAATTG	2 cut(s)	704, 1274
Mva1269I	GAATGC	2 cut(s)	1516, 1879
MvaI	CCWGG	4 cut(s)	896, 1194, 1396, 1861
MvnI	CGCG	1 cut(s)	1296
MwoI	GCNNNNNNNGC	9 cut(s)	68, 941, 961, 1124, 1623, 1632, 1641, 2041, 2144
NcoI	CCATGG	1 cut(s)	1254
NdeII	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
NlaIV	GGNNCC	7 cut(s)	1400, 1696, 1858, 2088, 2097, 2139, 2148
NmuCI	GTSAC	1 cut(s)	1060
NsbI	TGCGCA	1 cut(s)	1542
NsiI	ATGCAT	3 cut(s)	876, 1527, 1879
NspI	RCATGY	2 cut(s)	172, 1234
PaeR7I	CTCGAG	1 cut(s)	443
PagI	TCATGA	2 cut(s)	520, 1075
PceI	AGGCCT	1 cut(s)	1891
PciSI	GCTCTTC	2 cut(s)	1104, 1284
PctI	GAATGC	2 cut(s)	1516, 1879
PdmI	GAANNNNTTC	2 cut(s)	831, 982
PfeI	GAWTC	6 cut(s)	971, 1172, 1327, 1366, 1533, 1745
PflMI	CCANNNNNTGG	1 cut(s)	1712
PkrI	GCNGC	6 cut(s)	739, 1101, 1634, 2046, 2188, 2292
PleI	GAGTC	7 cut(s)	137, 769, 793, 1066, 1550, 1627, 1842
PmaCI	CACGTG	1 cut(s)	992
PmlI	CACGTG	1 cut(s)	992
PpsI	GAGTC	7 cut(s)	137, 769, 793, 1066, 1550, 1627, 1842
Ppu21I	YACGTR	1 cut(s)	992
Psp6I	CCWGG	4 cut(s)	894, 1192, 1394, 1859
PspCI	CACGTG	1 cut(s)	992
PspFI	CCCAGC	1 cut(s)	344
PspGI	CCWGG	4 cut(s)	894, 1192, 1394, 1859
PspN4I	GGNNCC	7 cut(s)	1400, 1696, 1858, 2088, 2097, 2139, 2148
PspPI	GGNCC	2 cut(s)	1703, 1916
PstNI	CAGNNNCTG	2 cut(s)	1030, 2054
PsuI	RGATCY	1 cut(s)	1085
PvuII	CAGCTG	1 cut(s)	2186
RsaI	GTAC	3 cut(s)	1549, 1764, 2097
RsaNI	GTAC	3 cut(s)	1548, 1763, 2096
RseI	CAYNNNNRTG	2 cut(s)	2105, 2156
SapI	GCTCTTC	2 cut(s)	1104, 1284
SaqAI	TTAA	7 cut(s)	498, 623, 840, 890, 1068, 1166, 2332
SatI	GCNGC	6 cut(s)	738, 1100, 1633, 2045, 2187, 2291
Sau3AI	GATC	5 cut(s)	412, 1085, 1941, 2180, 2236
Sau96I	GGNCC	2 cut(s)	1703, 1916
ScaI	AGTACT	1 cut(s)	1549
SchI	GAGTC	7 cut(s)	137, 769, 794, 1066, 1550, 1628, 1843
ScrFI	CCNGG	4 cut(s)	896, 1194, 1396, 1861
SduI	GDGCHC	4 cut(s)	64, 616, 2089, 2140
SfaNI	GCATC	9 cut(s)	682, 821, 861, 1023, 1277, 1339, 1534, 1849, 2198
SfcI	CTRYAG	1 cut(s)	749
Sfr274I	CTCGAG	1 cut(s)	443
SinI	GGWCC	1 cut(s)	1916
SlaI	CTCGAG	1 cut(s)	443
SmiMI	CAYNNNNRTG	2 cut(s)	2105, 2156
SmlI	CTYRAG	7 cut(s)	443, 497, 696, 839, 1049, 1791, 2118
SmoI	CTYRAG	7 cut(s)	443, 497, 696, 839, 1049, 1791, 2118
SseBI	AGGCCT	1 cut(s)	1891
SsiI	CCGC	6 cut(s)	266, 469, 1099, 1300, 2033, 2290
SspI	AATATT	1 cut(s)	320
SspMI	CTAG	4 cut(s)	1248, 1754, 1893, 2169
StuI	AGGCCT	1 cut(s)	1891
StyD4I	CCNGG	4 cut(s)	894, 1192, 1394, 1859
StyI	CCWWGG	3 cut(s)	1128, 1254, 2168
TaaI	ACNGT	3 cut(s)	257, 1066, 2324
TaiI	ACGT	3 cut(s)	994, 1162, 1955
TaqI	TCGA	4 cut(s)	188, 444, 1044, 1681
TaqII	GACCGA	1 cut(s)	1326
TatI	WGTACW	1 cut(s)	1547
TauI	GCSGC	2 cut(s)	1102, 2293
TfiI	GAWTC	6 cut(s)	971, 1172, 1327, 1366, 1533, 1745
Tru1I	TTAA	7 cut(s)	498, 623, 840, 890, 1068, 1166, 2332
Tru9I	TTAA	7 cut(s)	498, 623, 840, 890, 1068, 1166, 2332
TscAI	CASTG	2 cut(s)	1606, 1822
TseFI	GTSAC	1 cut(s)	1060
TseI	GCWGC	4 cut(s)	737, 1632, 2044, 2186
Tsp45I	GTSAC	1 cut(s)	1060
TspRI	CASTG	2 cut(s)	1606, 1822
Van91I	CCANNNNNTGG	1 cut(s)	1712
Vha464I	CTTAAG	2 cut(s)	497, 839
VpaK11BI	GGWCC	1 cut(s)	1916
XagI	CCTNNNNNAGG	1 cut(s)	1757
XapI	RAATTY	5 cut(s)	192, 759, 1204, 1355, 2221
XceI	RCATGY	2 cut(s)	172, 1234
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1261, 2014
XhoI	CTCGAG	1 cut(s)	443
XmaJI	CCTAGG	1 cut(s)	2168
XmnI	GAANNNNTTC	2 cut(s)	831, 982
XspI	CTAG	4 cut(s)	1248, 1754, 1893, 2169
ZrmI	AGTACT	1 cut(s)	1549
Zsp2I	ATGCAT	3 cut(s)	876, 1527, 1879

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.