Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001895

Physical Location & Seq

Genomic Coordinates Reverse (-)

63285614 .. 63307636

Gene Structure 22023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG471900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGCCAGAAAAGCTACCGTCGCCGATCATCGTGGAAATGTATGTGAAAGATGTAATTGGCATACCTATAGGACTAACCATTGGCACACCTATAGAAGGACTAACCATTATCTCTACTAAGGCTTCCAGTAGCTTGGAGTATATGAAGCAACTATTATCTGCAGCCAAGCACTGTTGCTTTAGAGGAGCAAGTGCTTTACATTTGCAAAATGCAAAACGATGGAATTCTGTACTAAATCTTCAGCTTCAAATGGCTCAAAAAGGCATTCATATCAACAAGGGTTTACTTGCTCTCGGAAATGTGATTAGTGCCCTGGGAGATGAGAAAAAGAGGAAAGAAGGCGGACATGTTCCCTACCGTGATAGCAAGTTAACTCGCTTGTTACAGGATTCACTAGGAGGAAACAGTAAGACTGTGATGATTGCTTGTGTTAGTCCAGCTGACACAAATGCTGAAGAGACCTTGAATACTTTAAAATATGCTAACCGTGCTCGCAACATCCAGAACAAGGCAGTGATCAATCGTGATCCGGTAGCTGCTCAGTTACAATTGATGCGCAGCCAGATTGAGCACTTGCAGACTGAACTTCTATTTTACCGTGGTGATGCTAGTGCACCATTTGAAGAACTGCAGATTCTTAAACACAAAGTGTCATTACTCGAAGCAAGCAACATGGAGCTGAGGCAGGAGCTTCAGGGACGCCGAATAACTTGTGAACACCTAACACAGCGTGCTCTTGAAGCTCAGGTTGAAAAAGATAAACTGGCCATGAAAATTGAAGCCTTCCGAAATGGTAAATCTTGGGATGAGATTGACTCCAATCCAGTTCAGGAATATGACATGCTGAAAACTTATGTATCAAAAATTCAAGAGTTAGAAGGGGAATTGTTATGCTTGAAAAACTCACAAAGCAGGAGACTTGTTGACTGTGTAGAGGCGGATGGTGATGGCTTTCACTCAAACAACATATTATTCCCCTGTAATGATGAATATTCATCTGATTACGATACCAAAGCTGGGGATGTTTCTGATGTGATAGATGTAGAAAAAGAGCAAGAACATTCTTCTCTTCAAGAAAAACTGGATCGGGAGCTGAAAGAATTGGACAAAGCTCTCGAGCAAAAGGAGGCTGAAATGAAGCGGTTTGCAAGTTCTGATACCTCGGTTCTTAAGCTGTATGAGAAGAAGGTTCATGAGTTAGAACATGAGAAGAAAGCCCTTCAGAGAGAGATTGAAGAGTTGAGACAAAATCTTTCAAATATCTCATCTACTTCTGGGGATGGTGCTCAAAAGTTAAAGGAGGATTATCTACACAAGTTGAACCTTCTTGAAGGACAGGTTCAATTGCAACACAAGATCAAACAGGAGTCTGAGCAGTTTAGATTATGGAAAGCATCACGAGAAAAAGAAGTTCTTCAGCTTAAGAAAGAGGGAAGGAGGAACGAGTATGAGATGCATAAGCTGTTAGCTTTAAACCAGAGGCAAAAAATGGTTTTGCAACGAAAGACAGAAGAAGCTAATACGACCACAAAAAAGCTAAAGGAGCTTTTAGAATCCAGAAAGACTTCTTCACGTGAAACTTCTGGTCATAATGCTCATGGTATTCAGGCTCTGATGCAGGCAATCGAACTTGAGCTTGAAGTCACAGTTAAGACTCATGAAGTAAGATCTGAGTATGAGCGGCAAATTGAAGAGCGTGCTATGATGGCCAAGGAAAGAACCAAGCTAATAGAAGAACAACGTAATTTAAGTGATTCCTCGGAAATAATGTCTCCTGGTGCCAGAAATTCAAGGATTTTTGCACTTGAAAACATGCTTGCTACTTCTTCTAGCACCATGGTATCTATGGCATCACAATTGTCAGAAGCAGAAGAGCGCGAGCGGGGTTTCAATGGGCAGGGGGCGTTGGAATCAAGTTCGGTCTCTTACAGATGCCAAAATTTTGATGAATCATCTGTTCAACTTAGCTTCTTCCTCCAGAACTCAGCATTGAAGAAATCTGAAAATGGACACAAGTATGATTTGCGCAAGCTATGGATAGCCTCAGGAAAGCCAAAGACTAAAAAGAGAAAGTCCAAACATGGAAGTTCAAGTGAGGGATTCAATGCGCAAAGTACTAATGACTCTGGAGGCTTCAAGTTAGATAGTGCTGGTGAGGGGATAGTCAGTGTTGTGAAGAAAAGCGAGTCGGGCGTATGCTGCTCTTGTAGCAAGACTTCCTCCTGCAAAACAACTAAATGTCAATGTCGAACTACTGGAGGAGCCTGTGGGCCATCATGTGGTTGTGTGCCTGCTAAGTGTTCAAATAGAGAATCCAGCCTAGTTGAGGTACATGGGTCTCCAGAAGGAGAAACTGCTCAAGGAATTGGAAATGATAAAGGCACTGATGAAACAGAGAAGAATCAGCATCTTGCTTCTCAGGGGGCCAGGTTACTTCAGAATGCATTAGTTGAGAGGCCTAGTGAAACAACTGATGATGGTGGACCAAGAAGGAAAGCTCTTTCAGAGATCGGAAATACGTTGCCAGCAACTGCTGAAGCACCTCAAAGGGCAGATAAAGGGGCACCAGAGGTACCCATCCCTATGAAGCTTCCTCAAGGGGCAGATAAAGGGGCACCAGAGGCACCCATCCCTATGAAGCTTCCTAGGGCAATGCGATCAGCTGCATCAAATGGTGGCAACTTATTTAGAGAAAGGAATTCTGATAAAGCAGATCAATCTGGTGTCAATAAGGAGGCCGGTGTTCCTGCTCCAAGAAGTCCTCTGCGGCAGAACAAAACATCAGATGAGAAGGAGAACTGTGGCCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0008574 GO:0009506 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030054 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0055044 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

936

Amino Acids

103.96

Weight (kDa)

7.94

Isoelectric Point (pI)

54.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	82 - 167	7e-33	Kinesin motor domain
KIF21A_4th	PF25764	341 - 448	2.7e-23	KIF21A-like domain
KIF21A_4th	PF25764	446 - 477	1.7e-08	KIF21A-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60930 AT5G60930 AT5G60930
fragaria_vesca	FvH4_5g35340
malus_domestica	MD08G1198000.v1.1 MD15G1385300.v1.1
prunus_persica	Prupe.1G532000_v2.0.a1 Prupe.1G532000_v2.0.a1 Prupe.1G532000_v2.0.a1 Prupe.1G532000_v2.0.a1
pyrus_communis	pycom08g17020 pycom15g07240 pycom15g34540
rosa_chinensis	RchiOBHm_Chr3g0494071 RchiOBHm_Chr7g0236541 RchiOBHm_Chr7g0236581 RchiOBHm_Chr7g0236691
rosa_laevigata	RLG00000000987 RLG00000000988 RLG00000001068 RLG00000001077 RLG00000001104
rosa_multiflora	Rmu_sc0002536.1_g000016 Rmu_sc0003720.1_g000010 Rmu_sc0011298.1_g000005 Rmu_ssc0000050.1_g000117
rosa_roxburghii	Rroxscaffold_3G00224960 Rroxscaffold_6G00429280
rosa_rugosa	Rorug07G0291900 Rorug07G0291900 Rorug07G0297600 Rorug07G0297700 Rorug07G0298200
rosa_samantha	Rh2CG391900 Rh7AG453300 Rh7AG453600 Rh7BG401100 Rh7BG418700 Rh7BG424500 Rh7CG471900 Rh7CG472100 Rh7DG438700 Rh7DG440900 Rh7DG441000
rosa_wichuraiana	Rw0G020690 Rw7G037620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	3 cut(s)	557, 2027, 2109
Acc65I	GGTACC	1 cut(s)	2572
AccB1I	GGYRCC	5 cut(s)	1778, 2563, 2572, 2614, 2623
AccB7I	CCANNNNNTGG	1 cut(s)	2279
AccBSI	CCGCTC	2 cut(s)	1681, 1882
AccII	CGCG	1 cut(s)	1878
AciI	CCGC	6 cut(s)	342, 938, 1141, 1681, 1882, 2767
AclWI	GGATC	2 cut(s)	521, 1092
AcoI	YGGCCR	2 cut(s)	765, 1707
AcsI	RAATTY	5 cut(s)	223, 864, 1786, 1939, 2698
AcuI	CTGAAG	7 cut(s)	224, 474, 677, 1205, 1400, 2420, 2556
AcvI	CACGTG	1 cut(s)	1574
AcyI	GRCGYC	1 cut(s)	700
AdeI	CACNNNGTG	2 cut(s)	649, 731
AfaI	GTAC	4 cut(s)	231, 2116, 2331, 2574
AfiI	CCNNNNNNNGG	5 cut(s)	95, 508, 1017, 2279, 2326
AflII	CTTAAG	2 cut(s)	1169, 1421
AflIII	ACRYGT	1 cut(s)	346
AjnI	CCWGG	3 cut(s)	312, 1774, 2426
Alw21I	GWGCWC	5 cut(s)	493, 573, 616, 736, 1288
Alw26I	GTCTC	6 cut(s)	452, 910, 1237, 1776, 1927, 2343
Alw44I	GTGCAC	1 cut(s)	612
AlwI	GGATC	2 cut(s)	521, 1092
AlwNI	CAGNNNCTG	2 cut(s)	1612, 2531
Ama87I	CYCGRG	1 cut(s)	1115
AoxI	GGCC	7 cut(s)	765, 1707, 2270, 2424, 2456, 2736, 2803
ApaLI	GTGCAC	1 cut(s)	612
ApeKI	GCWGC	5 cut(s)	161, 536, 558, 2199, 2663
ApoI	RAATTY	5 cut(s)	223, 864, 1786, 1939, 2698
Asp700I	GAANNNNTTC	2 cut(s)	1413, 1564
Asp718I	GGTACC	1 cut(s)	2572
AspA2I	CCTAGG	1 cut(s)	2645
AspLEI	GCGC	4 cut(s)	558, 1878, 2028, 2110
AspS9I	GGNCC	3 cut(s)	2270, 2424, 2483
AsuHPI	GGTGA	3 cut(s)	614, 956, 2165
AvaI	CYCGRG	1 cut(s)	1115
AvaII	GGWCC	1 cut(s)	2483
AvrII	CCTAGG	1 cut(s)	2645
AxyI	CCTNAGG	1 cut(s)	2044
BaeGI	GKGCMC	4 cut(s)	313, 616, 2566, 2617
BaeI	ACNNNNGTAYC	8 cut(s)	840, 873, 1149, 1182, 1824, 1857, 2321, 2354
BalI	TGGCCA	2 cut(s)	767, 1709
BanI	GGYRCC	5 cut(s)	1778, 2563, 2572, 2614, 2623
BarI	GAAGNNNNNNTAC	4 cut(s)	222, 254, 2200, 2232
BauI	CACGAG	1 cut(s)	1398
BbrPI	CACGTG	1 cut(s)	1574
Bbv12I	GWGCWC	5 cut(s)	493, 573, 616, 736, 1288
BbvCI	CCTCAGC	1 cut(s)	680
BbvI	GCAGC	5 cut(s)	173, 523, 570, 2186, 2650
BccI	CCATC	9 cut(s)	213, 935, 941, 1274, 1699, 2281, 2471, 2585, 2636
BciT130I	CCWGG	3 cut(s)	314, 1776, 2428
BclI	TGATCA	1 cut(s)	516
BcoDI	GTCTC	6 cut(s)	452, 910, 1237, 1776, 1927, 2343
BfaI	CTAG	6 cut(s)	395, 609, 1830, 2321, 2460, 2646
BfmI	CTRYAG	4 cut(s)	66, 90, 159, 629
BfrI	CTTAAG	2 cut(s)	1169, 1421
BglII	AGATCT	1 cut(s)	1667
BisI	GCNGC	7 cut(s)	162, 537, 559, 1682, 2200, 2664, 2768
BlnI	CCTAGG	1 cut(s)	2645
BlsI	GCNGC	7 cut(s)	163, 538, 560, 1683, 2201, 2665, 2769
BmcAI	AGTACT	1 cut(s)	2116
Bme1390I	CCNGG	3 cut(s)	314, 1776, 2428
Bme18I	GGWCC	1 cut(s)	2483
BmeT110I	CYCGRG	1 cut(s)	1115
BmgT120I	GGNCC	3 cut(s)	2270, 2424, 2483
BmiI	GGNNCC	7 cut(s)	1780, 2263, 2425, 2565, 2574, 2616, 2625
BmrFI	CCNGG	3 cut(s)	314, 1776, 2428
BmsI	GCATC	9 cut(s)	543, 595, 1403, 1443, 1605, 1859, 1922, 2416, 2675
BplI	GAGNNNNNCTC	2 cut(s)	800, 832
BpmI	CTGGAG	4 cut(s)	1961, 2148, 2277, 2325
Bpu10I	CCTNAGC	2 cut(s)	680, 744
BpuEI	CTTGAG	3 cut(s)	1652, 2343, 2580
BsaAI	YACGTR	1 cut(s)	1574
BsaHI	GRCGYC	1 cut(s)	700
BsaI	GGTCTC	3 cut(s)	452, 1927, 2343
BsaJI	CCNNGG	8 cut(s)	312, 313, 598, 1161, 1710, 1758, 1836, 2645
BsaWI	WCCGGW	1 cut(s)	529
Bsc4I	CCNNNNNNNGG	5 cut(s)	95, 508, 1017, 2279, 2326
Bse118I	RCCGGY	1 cut(s)	2738
Bse1I	ACTGG	5 cut(s)	126, 768, 824, 1086, 2260
Bse21I	CCTNAGG	1 cut(s)	2044
Bse3DI	GCAATG	1 cut(s)	2658
BseBI	CCWGG	3 cut(s)	314, 1776, 2428
BseDI	CCNNGG	8 cut(s)	312, 313, 598, 1161, 1710, 1758, 1836, 2645
BseGI	GGATG	7 cut(s)	498, 811, 946, 1027, 1285, 2577, 2628
BseLI	CCNNNNNNNGG	5 cut(s)	95, 508, 1017, 2279, 2326
BseMI	GCAATG	1 cut(s)	2658
BseMII	CTCAG	8 cut(s)	554, 671, 758, 1362, 1662, 1998, 2058, 2432
BseNI	ACTGG	5 cut(s)	126, 768, 824, 1086, 2260
BseRI	GAGGAG	2 cut(s)	198, 2274
BseSI	GKGCMC	4 cut(s)	313, 616, 2566, 2617
BseXI	GCAGC	5 cut(s)	173, 523, 570, 2186, 2650
BseYI	CCCAGC	1 cut(s)	1016
Bsh1236I	CGCG	1 cut(s)	1878
BshFI	GGCC	7 cut(s)	767, 1709, 2272, 2426, 2458, 2738, 2805
BshNI	GGYRCC	5 cut(s)	1778, 2563, 2572, 2614, 2623
BsiHKAI	GWGCWC	5 cut(s)	493, 573, 616, 736, 1288
BsiHKCI	CYCGRG	1 cut(s)	1115
BsiSI	CCGG	2 cut(s)	530, 2739
BslFI	GGGAC	1 cut(s)	711
BslI	CCNNNNNNNGG	5 cut(s)	95, 508, 1017, 2279, 2326
BsmAI	GTCTC	6 cut(s)	452, 910, 1237, 1776, 1927, 2343
BsmFI	GGGAC	1 cut(s)	711
BsmI	GAATGC	2 cut(s)	264, 2446
BsnI	GGCC	7 cut(s)	767, 1709, 2272, 2426, 2458, 2738, 2805
Bso31I	GGTCTC	3 cut(s)	452, 1927, 2343
BsoBI	CYCGRG	1 cut(s)	1115
Bsp1286I	GDGCHC	8 cut(s)	313, 493, 573, 616, 736, 1288, 2566, 2617
Bsp143I	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
Bsp19I	CCATGG	1 cut(s)	1836
BspACI	CCGC	6 cut(s)	342, 938, 1141, 1681, 1882, 2767
BspANI	GGCC	7 cut(s)	767, 1709, 2272, 2426, 2458, 2738, 2805
BspCNI	CTCAG	8 cut(s)	553, 672, 757, 1363, 1663, 1997, 2057, 2431
BspFNI	CGCG	1 cut(s)	1878
BspHI	TCATGA	2 cut(s)	1192, 1657
BspLI	GGNNCC	7 cut(s)	1780, 2263, 2425, 2565, 2574, 2616, 2625
BspMAI	CTGCAG	2 cut(s)	163, 633
BspPI	GGATC	2 cut(s)	521, 1092
BspQI	GCTCTTC	2 cut(s)	1686, 1866
BspT107I	GGYRCC	5 cut(s)	1778, 2563, 2572, 2614, 2623
BspTI	CTTAAG	2 cut(s)	1169, 1421
BspTNI	GGTCTC	3 cut(s)	452, 1927, 2343
BsrBI	CCGCTC	2 cut(s)	1681, 1882
BsrDI	GCAATG	1 cut(s)	2658
BsrFI	RCCGGY	1 cut(s)	2738
BsrI	ACTGG	5 cut(s)	126, 768, 824, 1086, 2260
BssAI	RCCGGY	1 cut(s)	2738
BssECI	CCNNGG	8 cut(s)	312, 313, 598, 1161, 1710, 1758, 1836, 2645
BssMI	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
BssNI	GRCGYC	1 cut(s)	700
BssSI	CACGAG	1 cut(s)	1398
BssT1I	CCWWGG	3 cut(s)	1710, 1836, 2645
Bst2BI	CACGAG	1 cut(s)	1398
Bst2UI	CCWGG	3 cut(s)	314, 1776, 2428
Bst6I	CTCTTC	5 cut(s)	450, 1074, 1230, 1686, 1866
BstACI	GRCGYC	1 cut(s)	700
BstAFI	CTTAAG	2 cut(s)	1169, 1421
BstBAI	YACGTR	1 cut(s)	1574
BstDSI	CCRYGG	2 cut(s)	598, 1836
BstENI	CCTNNNNNAGG	2 cut(s)	93, 2324
BstF5I	GGATG	7 cut(s)	498, 811, 946, 1027, 1285, 2577, 2628
BstFNI	CGCG	1 cut(s)	1878
BstHHI	GCGC	4 cut(s)	558, 1878, 2028, 2110
BstKTI	GATC	9 cut(s)	27, 519, 529, 1087, 1359, 1670, 2511, 2660, 2716
BstMAI	GTCTC	6 cut(s)	452, 910, 1237, 1776, 1927, 2343
BstMBI	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
BstNI	CCWGG	3 cut(s)	314, 1776, 2428
BstNSI	RCATGY	3 cut(s)	350, 844, 1816
BstSCI	CCNGG	3 cut(s)	312, 1774, 2426
BstSFI	CTRYAG	4 cut(s)	66, 90, 159, 629
BstSLI	GKGCMC	4 cut(s)	313, 616, 2566, 2617
BstUI	CGCG	1 cut(s)	1878
BstV1I	GCAGC	5 cut(s)	173, 523, 570, 2186, 2650
BstX2I	RGATCY	1 cut(s)	1667
BstXI	CCANNNNNNTGG	1 cut(s)	133
BstYI	RGATCY	1 cut(s)	1667
Bsu36I	CCTNAGG	1 cut(s)	2044
BsuRI	GGCC	7 cut(s)	767, 1709, 2272, 2426, 2458, 2738, 2805
BtgI	CCRYGG	2 cut(s)	598, 1836
BtsCI	GGATG	7 cut(s)	498, 811, 946, 1027, 1285, 2577, 2628
BtsI	GCAGTG	1 cut(s)	519
BtsIMutI	CAGTG	4 cut(s)	169, 519, 2173, 2382
CaiI	CAGNNNCTG	2 cut(s)	1612, 2531
CciI	TCATGA	2 cut(s)	1192, 1657
CfoI	GCGC	4 cut(s)	558, 1878, 2028, 2110
Cfr10I	RCCGGY	1 cut(s)	2738
Cfr13I	GGNCC	3 cut(s)	2270, 2424, 2483
CseI	GACGC	1 cut(s)	708
Csp6I	GTAC	4 cut(s)	230, 2115, 2330, 2573
CviQI	GTAC	4 cut(s)	230, 2115, 2330, 2573
DpnI	GATC	9 cut(s)	26, 518, 528, 1086, 1358, 1669, 2510, 2659, 2715
DpnII	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
DraI	TTTAAA	2 cut(s)	474, 1473
DraIII	CACNNNGTG	2 cut(s)	649, 731
EaeI	YGGCCR	2 cut(s)	765, 1707
Eam1104I	CTCTTC	5 cut(s)	450, 1074, 1230, 1686, 1866
EarI	CTCTTC	5 cut(s)	450, 1074, 1230, 1686, 1866
EciI	GGCGGA	2 cut(s)	357, 953
Eco130I	CCWWGG	3 cut(s)	1710, 1836, 2645
Eco147I	AGGCCT	1 cut(s)	2458
Eco31I	GGTCTC	3 cut(s)	452, 1927, 2343
Eco47I	GGWCC	1 cut(s)	2483
Eco57I	CTGAAG	7 cut(s)	224, 474, 677, 1205, 1400, 2420, 2556
Eco72I	CACGTG	1 cut(s)	1574
Eco81I	CCTNAGG	1 cut(s)	2044
Eco88I	CYCGRG	1 cut(s)	1115
EcoNI	CCTNNNNNAGG	2 cut(s)	93, 2324
EcoRI	GAATTC	2 cut(s)	223, 2698
EcoRII	CCWGG	3 cut(s)	312, 1774, 2426
EcoT14I	CCWWGG	3 cut(s)	1710, 1836, 2645
EcoT22I	ATGCAT	2 cut(s)	1458, 2446
ErhI	CCWWGG	3 cut(s)	1710, 1836, 2645
FalI	AAGNNNNNCTT	2 cut(s)	1398, 1430
FaqI	GGGAC	1 cut(s)	711
FauI	CCCGC	1 cut(s)	1875
FbaI	TGATCA	1 cut(s)	516
Fnu4HI	GCNGC	7 cut(s)	162, 537, 559, 1682, 2200, 2664, 2768
FokI	GGATG	7 cut(s)	485, 818, 953, 1034, 1292, 2564, 2615
Fsp4HI	GCNGC	7 cut(s)	162, 537, 559, 1682, 2200, 2664, 2768
FspBI	CTAG	6 cut(s)	395, 609, 1830, 2321, 2460, 2646
FspI	TGCGCA	3 cut(s)	557, 2027, 2109
GlaI	GCGC	4 cut(s)	557, 1877, 2027, 2109
GluI	GCNGC	7 cut(s)	162, 537, 559, 1682, 2200, 2664, 2768
GsaI	CCCAGC	1 cut(s)	1020
GsuI	CTGGAG	4 cut(s)	1961, 2148, 2277, 2325
HaeIII	GGCC	7 cut(s)	767, 1709, 2272, 2426, 2458, 2738, 2805
HapII	CCGG	2 cut(s)	530, 2739
HgaI	GACGC	1 cut(s)	708
HhaI	GCGC	4 cut(s)	558, 1878, 2028, 2110
Hin1I	GRCGYC	1 cut(s)	700
Hin6I	GCGC	4 cut(s)	556, 1876, 2026, 2108
HinP1I	GCGC	4 cut(s)	556, 1876, 2026, 2108
HincII	GTYRAC	2 cut(s)	372, 925
HindII	GTYRAC	2 cut(s)	372, 925
HindIII	AAGCTT	2 cut(s)	2588, 2639
HpaI	GTTAAC	1 cut(s)	372
HpaII	CCGG	2 cut(s)	530, 2739
HphI	GGTGA	3 cut(s)	614, 956, 2165
Hpy166II	GTNNAC	6 cut(s)	284, 372, 614, 716, 925, 2483
Hpy8I	GTNNAC	6 cut(s)	284, 372, 614, 716, 925, 2483
Hpy99I	CGWCG	1 cut(s)	22
HpyCH4IV	ACGT	3 cut(s)	1573, 1741, 2519
HpySE526I	ACGT	3 cut(s)	1573, 1741, 2519
Hsp92I	GRCGYC	1 cut(s)	700
HspAI	GCGC	4 cut(s)	556, 1876, 2026, 2108
KpnI	GGTACC	1 cut(s)	2576
Ksp22I	TGATCA	1 cut(s)	516
KspAI	GTTAAC	1 cut(s)	372
Kzo9I	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
LguI	GCTCTTC	2 cut(s)	1686, 1866
LmnI	GCTCC	7 cut(s)	185, 676, 688, 1090, 1543, 2261, 2755
Lsp1109I	GCAGC	5 cut(s)	173, 523, 570, 2186, 2650
LweI	GCATC	9 cut(s)	543, 595, 1403, 1443, 1605, 1859, 1922, 2416, 2675
MaeI	CTAG	6 cut(s)	395, 609, 1830, 2321, 2460, 2646
MaeII	ACGT	3 cut(s)	1573, 1741, 2519
MaeIII	GTNAC	4 cut(s)	381, 543, 1642, 2430
MalI	GATC	9 cut(s)	26, 518, 528, 1086, 1358, 1669, 2510, 2659, 2715
MbiI	CCGCTC	2 cut(s)	1681, 1882
MboI	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
MfeI	CAATTG	3 cut(s)	548, 1343, 1856
MflI	RGATCY	1 cut(s)	1667
MhlI	GDGCHC	8 cut(s)	313, 493, 573, 616, 736, 1288, 2566, 2617
MlsI	TGGCCA	2 cut(s)	767, 1709
MluNI	TGGCCA	2 cut(s)	767, 1709
MlyI	GAGTC	5 cut(s)	809, 1376, 1648, 2117, 2195
MmeI	TCCRAC	1 cut(s)	1887
Mox20I	TGGCCA	2 cut(s)	767, 1709
Mph1103I	ATGCAT	2 cut(s)	1458, 2446
MroXI	GAANNNNTTC	2 cut(s)	1413, 1564
MscI	TGGCCA	2 cut(s)	767, 1709
MslI	CAYNNNNRTG	3 cut(s)	2016, 2582, 2633
Msp20I	TGGCCA	2 cut(s)	767, 1709
MspA1I	CMGCKG	2 cut(s)	440, 2663
MspCI	CTTAAG	2 cut(s)	1169, 1421
MspI	CCGG	2 cut(s)	530, 2739
MspR9I	CCNGG	3 cut(s)	314, 1776, 2428
MunI	CAATTG	3 cut(s)	548, 1343, 1856
Mva1269I	GAATGC	2 cut(s)	264, 2446
MvaI	CCWGG	3 cut(s)	314, 1776, 2428
MvnI	CGCG	1 cut(s)	1878
NcoI	CCATGG	1 cut(s)	1836
NdeII	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
NlaIV	GGNNCC	7 cut(s)	1780, 2263, 2425, 2565, 2574, 2616, 2625
NmuCI	GTSAC	1 cut(s)	1642
NsbI	TGCGCA	3 cut(s)	557, 2027, 2109
NsiI	ATGCAT	2 cut(s)	1458, 2446
NspI	RCATGY	3 cut(s)	350, 844, 1816
PaeR7I	CTCGAG	1 cut(s)	1115
PagI	TCATGA	2 cut(s)	1192, 1657
PasI	CCCWGGG	1 cut(s)	313
PceI	AGGCCT	1 cut(s)	2458
PciI	ACATGT	1 cut(s)	346
PciSI	GCTCTTC	2 cut(s)	1686, 1866
PctI	GAATGC	2 cut(s)	264, 2446
PdmI	GAANNNNTTC	2 cut(s)	1413, 1564
PfeI	GAWTC	9 cut(s)	389, 634, 1553, 1754, 1910, 1949, 2100, 2312, 2401
PflMI	CCANNNNNTGG	1 cut(s)	2279
PkrI	GCNGC	7 cut(s)	163, 538, 560, 1683, 2201, 2665, 2769
PleI	GAGTC	5 cut(s)	809, 1375, 1648, 2117, 2194
PmaCI	CACGTG	1 cut(s)	1574
PmlI	CACGTG	1 cut(s)	1574
PpsI	GAGTC	5 cut(s)	809, 1375, 1648, 2117, 2194
Ppu21I	YACGTR	1 cut(s)	1574
PscI	ACATGT	1 cut(s)	346
Psp6I	CCWGG	3 cut(s)	312, 1774, 2426
PspCI	CACGTG	1 cut(s)	1574
PspFI	CCCAGC	1 cut(s)	1016
PspGI	CCWGG	3 cut(s)	312, 1774, 2426
PspN4I	GGNNCC	7 cut(s)	1780, 2263, 2425, 2565, 2574, 2616, 2625
PspPI	GGNCC	3 cut(s)	2270, 2424, 2483
PstI	CTGCAG	2 cut(s)	163, 633
PstNI	CAGNNNCTG	2 cut(s)	1612, 2531
PsuI	RGATCY	1 cut(s)	1667
PvuII	CAGCTG	2 cut(s)	440, 2663
RsaI	GTAC	4 cut(s)	231, 2116, 2331, 2574
RsaNI	GTAC	4 cut(s)	230, 2115, 2330, 2573
RseI	CAYNNNNRTG	3 cut(s)	2016, 2582, 2633
SapI	GCTCTTC	2 cut(s)	1686, 1866
SatI	GCNGC	7 cut(s)	162, 537, 559, 1682, 2200, 2664, 2768
Sau3AI	GATC	9 cut(s)	24, 516, 526, 1084, 1356, 1667, 2508, 2657, 2713
Sau96I	GGNCC	3 cut(s)	2270, 2424, 2483
ScaI	AGTACT	1 cut(s)	2116
SchI	GAGTC	5 cut(s)	809, 1376, 1648, 2117, 2195
ScrFI	CCNGG	3 cut(s)	314, 1776, 2428
SduI	GDGCHC	8 cut(s)	313, 493, 573, 616, 736, 1288, 2566, 2617
SfaNI	GCATC	9 cut(s)	543, 595, 1403, 1443, 1605, 1859, 1922, 2416, 2675
SfcI	CTRYAG	4 cut(s)	66, 90, 159, 629
Sfr274I	CTCGAG	1 cut(s)	1115
SinI	GGWCC	1 cut(s)	2483
SlaI	CTCGAG	1 cut(s)	1115
SmiMI	CAYNNNNRTG	3 cut(s)	2016, 2582, 2633
SmlI	CTYRAG	6 cut(s)	1115, 1169, 1421, 1631, 2358, 2595
SmoI	CTYRAG	6 cut(s)	1115, 1169, 1421, 1631, 2358, 2595
SseBI	AGGCCT	1 cut(s)	2458
SsiI	CCGC	6 cut(s)	342, 938, 1141, 1681, 1882, 2767
SspI	AATATT	1 cut(s)	992
SspMI	CTAG	6 cut(s)	395, 609, 1830, 2321, 2460, 2646
StuI	AGGCCT	1 cut(s)	2458
StyD4I	CCNGG	3 cut(s)	312, 1774, 2426
StyI	CCWWGG	3 cut(s)	1710, 1836, 2645
TaiI	ACGT	3 cut(s)	1576, 1744, 2522
TaqI	TCGA	4 cut(s)	660, 1116, 1626, 2248
TaqII	GACCGA	1 cut(s)	1909
TatI	WGTACW	2 cut(s)	229, 2114
TauI	GCSGC	2 cut(s)	1684, 2770
TfiI	GAWTC	9 cut(s)	389, 634, 1553, 1754, 1910, 1949, 2100, 2312, 2401
TscAI	CASTG	4 cut(s)	176, 519, 2173, 2389
TseFI	GTSAC	1 cut(s)	1642
TseI	GCWGC	5 cut(s)	161, 536, 558, 2199, 2663
Tsp45I	GTSAC	1 cut(s)	1642
TspRI	CASTG	4 cut(s)	176, 519, 2173, 2389
Van91I	CCANNNNNTGG	1 cut(s)	2279
Vha464I	CTTAAG	2 cut(s)	1169, 1421
VneI	GTGCAC	1 cut(s)	612
VpaK11BI	GGWCC	1 cut(s)	2483
XagI	CCTNNNNNAGG	2 cut(s)	93, 2324
XapI	RAATTY	5 cut(s)	223, 864, 1786, 1939, 2698
XceI	RCATGY	3 cut(s)	350, 844, 1816
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1843
XhoI	CTCGAG	1 cut(s)	1115
XmaJI	CCTAGG	1 cut(s)	2645
XmnI	GAANNNNTTC	2 cut(s)	1413, 1564
XspI	CTAG	6 cut(s)	395, 609, 1830, 2321, 2460, 2646
ZrmI	AGTACT	1 cut(s)	2116
Zsp2I	ATGCAT	2 cut(s)	1458, 2446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.