Rmu_sc0011298.1_g000005
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011298.1
Physical Location & Seq
Forward (+)
32573 .. 35827
3255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011298.1_g000005.1.cds

Sequence Viewer

Length: 1617 bp
atggatagctcggaatgcgtgcgggtggccgtgaacatcaggccgttgattacctccgagcttttggtcggctgcacggattgcatttccgtcgttcccggtgaacctcaggtgcaaattgggactcatacattcacctacgattatgtatacggtagcacagcactgccttctagctcagtgtatgatgattgtgttgctccactggtggatgcgcttttccatggatacaatgctactgtgcttgcttacggccagacgggttctgggaagacgtatacaatgggcactaactattctggtgaaggaagcaccggcggaatcataccgaaagtgatggaaactattttcaaaagagtggagacaacgaaagataacacggagttcttgatcagggtatcgtttattgagatattcaaggaggaagtgtttgacttgcttgatccaaattcatcatctctctctaaaaatgaaggggcagctactacaaagcctatagcaagagtgcctatccaaattagagaaacagtgagtggagggataacacttgctggtgtgactgagccagaggttaggacgaaggaagatatgggatcatatctggctcgaggttctttagctcgtgctacagggagcacaaacatgaacagtcagtcaagtcgctcacatgctatatttacaataaccatggagcaaaagaagatttctcactgtctgaatggagcaaataatgatgatatcggtgatgacatactatgcgcaaaactccatttagttgacctagcaggttctgagcgggcaaaacgaacaggcgcagatggcatgcgcttgaaagaaggcattcatatcaacaagggtttacttgctctcggaaatgtgattagtgccctgggagatgagaaaaagaggaaagaaggcggacatgttccctaccgtgatagcaagttaactcgcttgttacaggattcactgggaggaaacagtaagactgtgatgattgcttgtgttagtccagctgacacaaatgcagaagagaccttgaatactttaaaatatgctaaccgtgctcgcaacatccagaacaaggcagtgatcaatcgtgatccagtagctgctcagttacaattgatgcgcagccagattgagcacttgcaaactgaacttctattttaccgtggtgatgctagtgccccatttgaagaactgcagattcttaaacacaaagtgtcattactcgaagcaagcaacatggagctgaggcaggagcttcagggacgccgaataacttgtgaacacctaacacagcgtgctcttgaagctcaggttgaaaaagataaactggccatgaaaattgaagccttccgaaatggtaaatcttgggatgagattgactccaatccagttcaggaatatgacatgctgaaaacttatgtatcgaaaattcaagagttagaaggggaattgttatgcttgaaaaactcacaaagcaggagacttgttgactgtgtagaggcggatggtgatggctttcactcaaacaacatattattcccttgtaatgatgaatattcatctgattacgataccaaagctggggatgtttctggtaagatatga

Protein Analysis

538

Amino Acids

59.07

Weight (kDa)

5.48

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 760, 1133
Acc36I ACCTGC 1 cut(s) 776
AccBSI CCGCTC 1 cut(s) 796
AccI GTMKAC 2 cut(s) 150, 278
AciI CCGC 5 cut(s) 22, 318, 796, 918, 1514
AclWI GGATC 3 cut(s) 437, 601, 1097
AcoI YGGCCR 3 cut(s) 27, 253, 1341
AcsI RAATTY 2 cut(s) 448, 1440
AcuI CTGAAG 1 cut(s) 1253
AcyI GRCGYC 1 cut(s) 1276
AdeI CACNNNGTG 2 cut(s) 1225, 1307
AfiI CCNNNNNNNGG 2 cut(s) 1084, 1593
AflIII ACRYGT 1 cut(s) 922
AjnI CCWGG 1 cut(s) 888
Alw21I GWGCWC 4 cut(s) 638, 1069, 1149, 1312
Alw26I GTCTC 3 cut(s) 356, 1028, 1486
AlwI GGATC 3 cut(s) 437, 601, 1097
AlwNI CAGNNNCTG 2 cut(s) 791, 1112
Ama87I CYCGRG 1 cut(s) 606
AoxI GGCC 4 cut(s) 27, 41, 253, 1341
ApeKI GCWGC 4 cut(s) 72, 479, 1112, 1134
ApoI RAATTY 2 cut(s) 448, 1440
Asp700I GAANNNNTTC 1 cut(s) 840
AspLEI GCGC 5 cut(s) 217, 761, 815, 828, 1134
AsuC2I CCSGG 1 cut(s) 99
AsuHPI GGTGA 6 cut(s) 113, 127, 314, 755, 1190, 1532
AvaI CYCGRG 1 cut(s) 606
AxyI CCTNAGG 1 cut(s) 108
BaeGI GKGCMC 3 cut(s) 290, 889, 1192
BaeI ACNNNNGTAYC 2 cut(s) 1416, 1449
BalI TGGCCA 1 cut(s) 1343
BauI CACGAG 1 cut(s) 621
BbsI GAAGAC 1 cut(s) 278
Bbv12I GWGCWC 4 cut(s) 638, 1069, 1149, 1312
BbvCI CCTCAGC 1 cut(s) 1256
BbvI GCAGC 4 cut(s) 59, 491, 1099, 1146
BccI CCATC 4 cut(s) 331, 812, 1511, 1517
BceAI ACGGC 3 cut(s) 14, 28, 268
BcgI CGANNNNNNTGC 2 cut(s) 73, 107
BciT130I CCWGG 1 cut(s) 890
BciVI GTATCC 1 cut(s) 221
BclI TGATCA 2 cut(s) 390, 1092
BcnI CCSGG 1 cut(s) 99
BcoDI GTCTC 3 cut(s) 356, 1028, 1486
BfaI CTAG 3 cut(s) 174, 782, 1185
BfmI CTRYAG 3 cut(s) 495, 627, 1205
BfuAI ACCTGC 1 cut(s) 776
BfuI GTATCC 1 cut(s) 221
BisI GCNGC 4 cut(s) 73, 480, 1113, 1135
BlsI GCNGC 4 cut(s) 74, 481, 1114, 1136
Bme1390I CCNGG 2 cut(s) 99, 890
BmeT110I CYCGRG 1 cut(s) 606
BmrFI CCNGG 2 cut(s) 99, 890
BmrI ACTGGG 1 cut(s) 980
BmsI GCATC 3 cut(s) 202, 1119, 1171
BmuI ACTGGG 1 cut(s) 980
BpiI GAAGAC 1 cut(s) 278
BplI GAGNNNNNCTC 2 cut(s) 1376, 1408
Bpu10I CCTNAGC 2 cut(s) 1256, 1320
BpuMI CCSGG 1 cut(s) 99
BsaHI GRCGYC 1 cut(s) 1276
BsaI GGTCTC 1 cut(s) 1028
BsaJI CCNNGG 5 cut(s) 223, 687, 888, 889, 1174
BsaXI ACNNNNNCTCC 2 cut(s) 413, 443
Bsc4I CCNNNNNNNGG 2 cut(s) 1084, 1593
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 5 cut(s) 210, 975, 1106, 1344, 1400
Bse21I CCTNAGG 1 cut(s) 108
BseBI CCWGG 1 cut(s) 890
BseDI CCNNGG 5 cut(s) 223, 687, 888, 889, 1174
BseGI GGATG 5 cut(s) 217, 1074, 1387, 1522, 1603
BseLI CCNNNNNNNGG 2 cut(s) 1084, 1593
BseMII CTCAG 7 cut(s) 122, 192, 552, 783, 1130, 1247, 1334
BseNI ACTGG 5 cut(s) 210, 975, 1106, 1344, 1400
BseSI GKGCMC 3 cut(s) 290, 889, 1192
BseXI GCAGC 4 cut(s) 59, 491, 1099, 1146
BseYI CCCAGC 1 cut(s) 1592
BsgI GTGCAG 1 cut(s) 58
BshFI GGCC 4 cut(s) 29, 43, 255, 1343
BsiHKAI GWGCWC 4 cut(s) 638, 1069, 1149, 1312
BsiHKCI CYCGRG 1 cut(s) 606
BsiSI CCGG 2 cut(s) 99, 315
BslFI GGGAC 2 cut(s) 136, 1287
BslI CCNNNNNNNGG 2 cut(s) 1084, 1593
BsmAI GTCTC 3 cut(s) 356, 1028, 1486
BsmFI GGGAC 2 cut(s) 136, 1287
BsmI GAATGC 2 cut(s) 20, 840
BsnI GGCC 4 cut(s) 29, 43, 255, 1343
Bso31I GGTCTC 1 cut(s) 1028
BsoBI CYCGRG 1 cut(s) 606
Bsp1286I GDGCHC 7 cut(s) 290, 638, 889, 1069, 1149, 1192, 1312
Bsp143I GATC 5 cut(s) 390, 442, 593, 1092, 1102
Bsp19I CCATGG 2 cut(s) 223, 687
BspACI CCGC 5 cut(s) 22, 318, 796, 918, 1514
BspANI GGCC 4 cut(s) 29, 43, 255, 1343
BspCNI CTCAG 7 cut(s) 121, 191, 553, 784, 1129, 1248, 1333
BspMAI CTGCAG 1 cut(s) 1209
BspMI ACCTGC 1 cut(s) 776
BspPI GGATC 3 cut(s) 437, 601, 1097
BspTNI GGTCTC 1 cut(s) 1028
BsrBI CCGCTC 1 cut(s) 796
BsrFI RCCGGY 1 cut(s) 314
BsrI ACTGG 5 cut(s) 210, 975, 1106, 1344, 1400
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 5 cut(s) 223, 687, 888, 889, 1174
BssMI GATC 5 cut(s) 390, 442, 593, 1092, 1102
BssNAI GTATAC 2 cut(s) 151, 279
BssNI GRCGYC 1 cut(s) 1276
BssSI CACGAG 1 cut(s) 621
BssT1I CCWWGG 2 cut(s) 223, 687
Bst1107I GTATAC 2 cut(s) 151, 279
Bst2BI CACGAG 1 cut(s) 621
Bst2UI CCWGG 1 cut(s) 890
Bst6I CTCTTC 1 cut(s) 1026
BstACI GRCGYC 1 cut(s) 1276
BstAPI GCANNNNNTGC 1 cut(s) 81
BstC8I GCNNGC 7 cut(s) 20, 246, 798, 824, 1069, 1243, 1308
BstDEI CTNAG 7 cut(s) 108, 178, 561, 792, 1116, 1256, 1320
BstDSI CCRYGG 3 cut(s) 223, 687, 1174
BstF5I GGATG 5 cut(s) 217, 1074, 1387, 1522, 1603
BstHHI GCGC 5 cut(s) 217, 761, 815, 828, 1134
BstKTI GATC 5 cut(s) 393, 445, 596, 1095, 1105
BstMAI GTCTC 3 cut(s) 356, 1028, 1486
BstMBI GATC 5 cut(s) 390, 442, 593, 1092, 1102
BstMWI GCNNNNNNNGC 5 cut(s) 15, 81, 819, 1064, 1316
BstNI CCWGG 1 cut(s) 890
BstNSI RCATGY 4 cut(s) 671, 826, 926, 1420
BstSCI CCNGG 2 cut(s) 97, 888
BstSFI CTRYAG 3 cut(s) 495, 627, 1205
BstSLI GKGCMC 3 cut(s) 290, 889, 1192
BstV1I GCAGC 4 cut(s) 59, 491, 1099, 1146
BstV2I GAAGAC 1 cut(s) 278
BstZ17I GTATAC 2 cut(s) 151, 279
Bsu36I CCTNAGG 1 cut(s) 108
BsuI GTATCC 1 cut(s) 221
BsuRI GGCC 4 cut(s) 29, 43, 255, 1343
BtgI CCRYGG 3 cut(s) 223, 687, 1174
BtsCI GGATG 5 cut(s) 217, 1074, 1387, 1522, 1603
BtsI GCAGTG 2 cut(s) 164, 1095
BtsIMutI CAGTG 7 cut(s) 164, 186, 203, 534, 709, 968, 1095
BveI ACCTGC 1 cut(s) 776
Cac8I GCNNGC 7 cut(s) 20, 246, 798, 824, 1069, 1243, 1308
CaiI CAGNNNCTG 2 cut(s) 791, 1112
CfoI GCGC 5 cut(s) 217, 761, 815, 828, 1134
Cfr10I RCCGGY 1 cut(s) 314
CseI GACGC 1 cut(s) 1284
CviAII CATG 9 cut(s) 224, 643, 668, 688, 823, 923, 1249, 1345, 1417
DdeI CTNAG 7 cut(s) 108, 178, 561, 792, 1116, 1256, 1320
DpnI GATC 5 cut(s) 392, 444, 595, 1094, 1104
DpnII GATC 5 cut(s) 390, 442, 593, 1092, 1102
DraI TTTAAA 1 cut(s) 1050
DraIII CACNNNGTG 2 cut(s) 1225, 1307
EaeI YGGCCR 3 cut(s) 27, 253, 1341
Eam1104I CTCTTC 1 cut(s) 1026
EarI CTCTTC 1 cut(s) 1026
EciI GGCGGA 3 cut(s) 333, 933, 1529
Eco130I CCWWGG 2 cut(s) 223, 687
Eco31I GGTCTC 1 cut(s) 1028
Eco32I GATATC 1 cut(s) 739
Eco57I CTGAAG 1 cut(s) 1253
Eco81I CCTNAGG 1 cut(s) 108
Eco88I CYCGRG 1 cut(s) 606
EcoRII CCWGG 1 cut(s) 888
EcoRV GATATC 1 cut(s) 739
EcoT14I CCWWGG 2 cut(s) 223, 687
ErhI CCWWGG 2 cut(s) 223, 687
FaeI CATG 9 cut(s) 227, 646, 671, 691, 826, 926, 1252, 1348, 1420
FaqI GGGAC 2 cut(s) 136, 1287
FatI CATG 9 cut(s) 223, 642, 667, 687, 822, 922, 1248, 1344, 1416
FauI CCCGC 2 cut(s) 15, 789
FbaI TGATCA 2 cut(s) 390, 1092
FblI GTMKAC 2 cut(s) 150, 278
Fnu4HI GCNGC 4 cut(s) 73, 480, 1113, 1135
FokI GGATG 5 cut(s) 224, 1061, 1394, 1529, 1610
Fsp4HI GCNGC 4 cut(s) 73, 480, 1113, 1135
FspBI CTAG 3 cut(s) 174, 782, 1185
FspI TGCGCA 2 cut(s) 760, 1133
GlaI GCGC 5 cut(s) 216, 760, 814, 827, 1133
GluI GCNGC 4 cut(s) 73, 480, 1113, 1135
GsaI CCCAGC 1 cut(s) 1596
HaeIII GGCC 4 cut(s) 29, 43, 255, 1343
HapII CCGG 2 cut(s) 99, 315
HgaI GACGC 1 cut(s) 1284
HhaI GCGC 5 cut(s) 217, 761, 815, 828, 1134
Hin1I GRCGYC 1 cut(s) 1276
Hin1II CATG 9 cut(s) 227, 646, 671, 691, 826, 926, 1252, 1348, 1420
Hin6I GCGC 5 cut(s) 215, 759, 813, 826, 1132
HinP1I GCGC 5 cut(s) 215, 759, 813, 826, 1132
HincII GTYRAC 3 cut(s) 778, 948, 1501
HindII GTYRAC 3 cut(s) 778, 948, 1501
HinfI GANTC 5 cut(s) 124, 321, 965, 1210, 1391
HpaI GTTAAC 1 cut(s) 948
HpaII CCGG 2 cut(s) 99, 315
HphI GGTGA 6 cut(s) 113, 127, 314, 755, 1190, 1532
Hpy166II GTNNAC 9 cut(s) 34, 104, 151, 279, 778, 860, 948, 1292, 1501
Hpy188I TCNGA 7 cut(s) 13, 58, 717, 793, 872, 1364, 1576
Hpy188III TCNNGA 6 cut(s) 388, 1078, 1100, 1313, 1406, 1445
Hpy8I GTNNAC 9 cut(s) 34, 104, 151, 279, 778, 860, 948, 1292, 1501
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 8 cut(s) 180, 299, 467, 574, 830, 908, 1369, 1448
HpyCH4IV ACGT 1 cut(s) 275
HpyCH4V TGCA 6 cut(s) 75, 84, 115, 1028, 1153, 1207
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 81, 819, 1064, 1316
HpyF3I CTNAG 7 cut(s) 108, 178, 561, 792, 1116, 1256, 1320
HpySE526I ACGT 1 cut(s) 275
Hsp92I GRCGYC 1 cut(s) 1276
Hsp92II CATG 9 cut(s) 227, 646, 671, 691, 826, 926, 1252, 1348, 1420
HspAI GCGC 5 cut(s) 215, 759, 813, 826, 1132
Ksp22I TGATCA 2 cut(s) 390, 1092
KspAI GTTAAC 1 cut(s) 948
Kzo9I GATC 5 cut(s) 390, 442, 593, 1092, 1102
LmnI GCTCC 6 cut(s) 205, 633, 691, 722, 1252, 1264
Lsp1109I GCAGC 4 cut(s) 59, 491, 1099, 1146
LweI GCATC 3 cut(s) 202, 1119, 1171
MaeI CTAG 3 cut(s) 174, 782, 1185
MaeII ACGT 1 cut(s) 275
MaeIII GTNAC 3 cut(s) 556, 957, 1119
MalI GATC 5 cut(s) 392, 444, 595, 1094, 1104
MbiI CCGCTC 1 cut(s) 796
MboI GATC 5 cut(s) 390, 442, 593, 1092, 1102
MboII GAAGA 5 cut(s) 283, 596, 712, 1043, 1211
MfeI CAATTG 1 cut(s) 1124
MhlI GDGCHC 7 cut(s) 290, 638, 889, 1069, 1149, 1192, 1312
MlsI TGGCCA 1 cut(s) 1343
MluCI AATT 7 cut(s) 117, 448, 516, 1124, 1350, 1440, 1460
MluNI TGGCCA 1 cut(s) 1343
MlyI GAGTC 2 cut(s) 118, 1385
Mox20I TGGCCA 1 cut(s) 1343
MroXI GAANNNNTTC 1 cut(s) 840
MscI TGGCCA 1 cut(s) 1343
MseI TTAA 3 cut(s) 947, 1049, 1215
MslI CAYNNNNRTG 1 cut(s) 641
Msp20I TGGCCA 1 cut(s) 1343
MspA1I CMGCKG 1 cut(s) 1016
MspI CCGG 2 cut(s) 99, 315
MspR9I CCNGG 2 cut(s) 99, 890
MunI CAATTG 1 cut(s) 1124
Mva1269I GAATGC 2 cut(s) 20, 840
MvaI CCWGG 1 cut(s) 890
MwoI GCNNNNNNNGC 5 cut(s) 15, 81, 819, 1064, 1316
NciI CCSGG 1 cut(s) 99
NcoI CCATGG 2 cut(s) 223, 687
NdeII GATC 5 cut(s) 390, 442, 593, 1092, 1102
NlaIII CATG 9 cut(s) 227, 646, 671, 691, 826, 926, 1252, 1348, 1420
NmuCI GTSAC 1 cut(s) 556
NsbI TGCGCA 2 cut(s) 760, 1133
NspI RCATGY 4 cut(s) 671, 826, 926, 1420
PaeI GCATGC 1 cut(s) 826
PaeR7I CTCGAG 1 cut(s) 606
PasI CCCWGGG 1 cut(s) 889
PciI ACATGT 1 cut(s) 922
PctI GAATGC 2 cut(s) 20, 840
PdmI GAANNNNTTC 1 cut(s) 840
PfeI GAWTC 3 cut(s) 321, 965, 1210
PkrI GCNGC 4 cut(s) 74, 481, 1114, 1136
PleI GAGTC 2 cut(s) 118, 1385
PpsI GAGTC 2 cut(s) 118, 1385
PscI ACATGT 1 cut(s) 922
Psp6I CCWGG 1 cut(s) 888
PspFI CCCAGC 1 cut(s) 1592
PspGI CCWGG 1 cut(s) 888
PspXI VCTCGAGB 1 cut(s) 606
PstI CTGCAG 1 cut(s) 1209
PstNI CAGNNNCTG 2 cut(s) 791, 1112
PvuII CAGCTG 1 cut(s) 1016
RseI CAYNNNNRTG 1 cut(s) 641
SaqAI TTAA 3 cut(s) 947, 1049, 1215
SatI GCNGC 4 cut(s) 73, 480, 1113, 1135
Sau3AI GATC 5 cut(s) 390, 442, 593, 1092, 1102
SchI GAGTC 2 cut(s) 118, 1385
ScrFI CCNGG 2 cut(s) 99, 890
SduI GDGCHC 7 cut(s) 290, 638, 889, 1069, 1149, 1192, 1312
SfaNI GCATC 3 cut(s) 202, 1119, 1171
SfcI CTRYAG 3 cut(s) 495, 627, 1205
Sfr274I CTCGAG 1 cut(s) 606
SgrAI CRCCGGYG 1 cut(s) 314
SlaI CTCGAG 1 cut(s) 606
SmiMI CAYNNNNRTG 1 cut(s) 641
SmlI CTYRAG 1 cut(s) 606
SmoI CTYRAG 1 cut(s) 606
SphI GCATGC 1 cut(s) 826
Sse9I AATT 7 cut(s) 117, 448, 516, 1124, 1350, 1440, 1460
SsiI CCGC 5 cut(s) 22, 318, 796, 918, 1514
SspI AATATT 1 cut(s) 1568
SspMI CTAG 3 cut(s) 174, 782, 1185
StyD4I CCNGG 2 cut(s) 97, 888
StyI CCWWGG 2 cut(s) 223, 687
TaiI ACGT 1 cut(s) 278
TaqI TCGA 3 cut(s) 607, 1236, 1436
TasI AATT 7 cut(s) 117, 448, 516, 1124, 1350, 1440, 1460
TfiI GAWTC 3 cut(s) 321, 965, 1210
Tru1I TTAA 3 cut(s) 947, 1049, 1215
Tru9I TTAA 3 cut(s) 947, 1049, 1215
TscAI CASTG 7 cut(s) 171, 186, 210, 534, 716, 975, 1095
TseFI GTSAC 1 cut(s) 556
TseI GCWGC 4 cut(s) 72, 479, 1112, 1134
Tsp45I GTSAC 1 cut(s) 556
TspDTI ATGAA 7 cut(s) 441, 486, 659, 833, 1361, 1560, 1578
TspGWI ACGGA 3 cut(s) 79, 92, 395
TspRI CASTG 7 cut(s) 171, 186, 210, 534, 716, 975, 1095
XapI RAATTY 2 cut(s) 448, 1440
XceI RCATGY 4 cut(s) 671, 826, 926, 1420
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XhoI CTCGAG 1 cut(s) 606
XmiI GTMKAC 2 cut(s) 150, 278
XmnI GAANNNNTTC 1 cut(s) 840
XspI CTAG 3 cut(s) 174, 782, 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.