Rroxscaffold_3G00224960
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
8217817 .. 8228951
11135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00224960.1

Sequence Viewer

Length: 3714 bp
ATGGATAGCTCGGAATGCGTGCGGGTGGCCGTGAACATCAGGCCGTTGATTACCTCCGAGCTTTTGGTCGGCTGCACGGATTGCATTTCCGTCGTTCCTGGTGAACCTCAGGTGCAAATTGGGACTCATACATTCACCTACGATTATGTGTATGGTAGCACAGCACTGCCTTCTAGCTCAGTGTATGATGATTGTGTTGCGCCACTGGTGGATGCTCTCTTCCATGGATACAATGCTACTGTGCTTGCTTACGGCCAGACGGGTTCTGGGAAGACGTATACGATGGGCACTAACTATTCTGGGGAAGGAAGCACTGGCGGAATCATACCGAAAGTGATGGAAACTATTTTCAAAAGAGTGGAGACAACGAAAGATAATACGGAGTTCTTGATCAGGGTATCGTTTATTGAGATATTCAAGGAGGAAGTGTTTGACTTGCTTGATCCAAATTCATCATCTCTCTCTAAAAATGAAGGGGCAGCTACTACAAAGCCTATAGCAAGGGTGCCTATCCAAATTAGAGAAACAGTGAGTGGGGGGATAACACTTGCTGGTGTGACTGAGCCAGAGGTTAGGACGAAGGAAGATATGGGATCATATCTGGCTCGAGGTTCTTTAGCTCGTGCTACAGGGAGCACAAACATGAACAGTCAGTCAAGTCGCTCACATGCTATATTTACAATAACCATGGAGCAAAAGAAGATTTCTCACTCTCTGAATGGAGCAAATAATGATGATATCGGTGATGACATACTATGCGCAAAACTCCATTTAGTTGACCTAGCAGGTTCTGAGCGGGCAAAACGAACAGGTGCAGATGGCATGCGCTTGAAAGAAGGCATTCATATCAACAAGGGTTTACTTGCTCTCGGAAATGTGATTAGTGCCCTGGGAGATGAGAAAAAGAGGAAAGAAGGCGGACATGTTCCCTACCGTGATAGCAAGTTAACTCGCTTGTTACAGGATTCACTAGGAGGAAACAGTAAGACTGTGATGATTGCTTGTGTTAGTCCAGCTGACACAAATGCAGAAGAGACCTTGAATACTTTAAAATATGCTAACCGTGCTCGCAACATCCAGAACAAGGCAGTGATCAATCGTGATCCAGTAGCTGCTCAGTTACAATTGATGCGCAGCCAGATTGAGCACTTGCAGACTGAACTTCTATTTTACCGTGGTGATGCTAGTGCACCATTTGAAGAACTGCAGATTCTTAAACACAAAGTGTCATTACTCGAAGCAAGCAACATGGAGCTGAGGCAGGAGCTTCAGGGGCGCCGAATAACTTGTGAACACCTAACACAGCGTGCTCTTGAAGCTCAGGTTGAAAAAGATAAACTGGCCATGAAAATTGAAGCCTTCCGAAATGGTAAATCTTGGGATGAGATTGACTCCAATCCAGTTCAGGAATATGACATGCTGAAAACTTATGTATCAAAAATTCAAGAGTTAGAAGGGGAATTGTTATGCTTGAAAAACTCACAAAGCAGGAGACGTGTTGACTGTGTAGAGGCGGATGGTGATGGCTTTCACTCAAACAACATATTATTCCCCTGTAATGATGAATATTCATCTGATTACGATACCAAAGCTGGGGATGTTTCTGATGTGATAGATGTAGAAAAAGAGCAAGAACATTCTTCTCTTCAAGAAAAACTGGATCGGGAGCTGAAAGAATTGGACAAAGCTCTCGAGCAAAAGGAGGCTGAAATGAAGCGGTTTACAAGTTCTGATACCTCGGTTCTTAAGCTGTATGAGAAGAAGGTTCATGAGTTAGAACATGAGAAGAAAGCCCTTCAGAGAGAGATTGAAGAGTTGAGACAAAATCTTTCAAATATCTCATCTACTTCTGGGGATGGTGCTCAAAAGTTAAAGGAGGATTATCTACACAAGTTGAACCTTCTTGAAGGACAGGTTTCTGAGCTGAAAAAGAAACAGGATGCTCAAGCCCAACTGTTGAGACAAAAACAAAAAAGCGATGAGGCTGCAAGGAGACTACAGGATGAAATTCAGAGAATAAAGACTCAAAAGGTTCAATTGCAACACAAGATCAAACAGGAGTCTGAGCAGTTTAGATTATGGAAAGCATCACGAGAAAAAGAAGTTCTTCAGCTTAAGAAAGAGGGAAGGAGGAATGAGTATGAGATGCATAAGCTGTTAGCTTTAAACCAGAGGCAAAAAATGGTTTTGCAACGAAAGACAGAAGAAGCTAATATGGCCACAAAAAAGCTAAAGGAGCTTTTAGAATCCAGAAAGACTTCTTCACGTGAAACTTCTGGTCATAATGCTCATGGTATTCAGGCTCTGATGCAGGCAATCGAACTTGAGCTTGAAGTCACAGTTAAGACTCATGAAGTAAGATCTGAGTATGAGCGGCAAATTGAAGAGCGTGCTATGATGGCCAAGGAAAGAACCAAGCTAATAGAAGAACAACGTAATTTAAGTGATTCCTCGGAAATAATGTCTCCTGGTGCAAGAAATTCAAGGATTTTTGCACTTGAAAACATGCTCGCTACTTCTTCTAGCACCATGGTATCTATGGCATCACAATTGTCAGAAGCAGAAGAGCGTGAGCGGGGTTTCAATGGCAGGGGCGTTGGAATCAAGTGCCTGTTACGAGATAAAGAAGTTGCATACAGAGAGAAGGATTTGGAAATAAGAGATTTGAAGGAAAAAGTAGTAAGCCTCAGTAGTTCGCTCAGGAAGTTGGAGAATAAGAATGCTGAACTTATGCATCAGAACTCAGCGTTGAAGAAATCTGAAAATGGACACAAGTATGATTTGCGCAAGCTAGATTCACGGACATCATTCATCTTGGAGGACATGGATATATCTGACTCAGATGATGAGTGGATAGCCTCAGGAAAGCCAAAGACTAAAAAGAGAAAGTCCAAATATGGAAGTTCAAGTGAGGGATTCAATGCGCAAAGTACTAATGACTCTGGAGGCTTCAAGTTAGATAGTGCTGGTGAGGGGATAGTCAGTGTTGTGAGGAAAAGCGAGTCCGGCGTATGCTGCTCTTGTAGCAAGACTTCCTCCTGCAAAACAACTAAATGTCAATGTCGAACTACTGGAGGAGCCTGTGGGCCATCATGTGGTTGTGTGCCTGCTAAGTGTTCAAATAGAGAATCCAGCCTTGAGGTACATGGGTCTCCAGAAGAAGAAACTGCTCAGGGAATTGGAAATGATGAAGGGACTGATGAAACAGAGAAGAATCAGCATCTTGCTTCTCAGGGTGCCAGGTTACTTCAGAATGCATTAGTTGAGAGGCCTAGTGAAACAACTGATGATGGTGGACCAAGAAGGAAAGCTCTTTCAGAGATCGGAAATACGTTGGCCAAATCCAATGCGCCGAAGCCTAACCAGAGAAAGAAATGGCGAAGAACCACAATCCAACTGGTTACAAATGCTCCGCCTCCCTCGCAGCCAGCAACTGCTGAAGCACCTCAAAGGCCAGATAAAGGGGCACCAGAGGTACCCATCCCTATGAAGCTTCCTCAAGGGGCAGATAAAGGGGCACCAGAGGCACCCATCCCTATGAAGCTTCCTAGGGCAATGCGATCAGCTGCATCAAATGGTGGCAACTTATTTAGAGAAAGGAATTCTGATAAAGCAGATCAATCTGGTGTCAATAAGGAGGCCGGTGTTCCTGCTCCAAGAAGTCCTCTGCGGCAGAACAAAACATCAGATGAGAAGGAGAACTGTGGCCTTTAA

Protein Analysis

1237

Amino Acids

137.42

Weight (kDa)

7.1

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 6 - 147 1e-18 Microtubule binding
Kinesin PF00225 39 - 359 3.5e-105 Kinesin motor domain
KIF21A_4th PF25764 533 - 708 8.4e-54 KIF21A-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 4 cut(s) 760, 1133, 2786, 2925
Acc36I ACCTGC 1 cut(s) 776
Acc65I GGTACC 1 cut(s) 3475
AccB1I GGYRCC 7 cut(s) 505, 1275, 3236, 3466, 3475, 3517, 3526
AccB7I CCANNNNNTGG 1 cut(s) 3095
AccBSI CCGCTC 3 cut(s) 796, 2374, 2575
AccI GTMKAC 1 cut(s) 278
AclWI GGATC 4 cut(s) 437, 601, 1097, 1668
AcoI YGGCCR 6 cut(s) 27, 253, 1341, 2217, 2400, 3336
AcsI RAATTY 5 cut(s) 448, 1440, 2007, 2479, 3601
AcuI CTGAAG 5 cut(s) 1253, 1781, 2093, 3233, 3459
AcvI CACGTG 1 cut(s) 2267
AcyI GRCGYC 1 cut(s) 1276
AdeI CACNNNGTG 2 cut(s) 1225, 1307
AfaI GTAC 3 cut(s) 2932, 3144, 3477
AfiI CCNNNNNNNGG 4 cut(s) 1084, 1593, 3095, 3461
AflII CTTAAG 2 cut(s) 1745, 2114
AflIII ACRYGT 2 cut(s) 922, 1495
AjiI CACGTC 1 cut(s) 1496
AjnI CCWGG 4 cut(s) 97, 888, 2467, 3239
Alw21I GWGCWC 6 cut(s) 638, 1069, 1149, 1192, 1312, 1864
Alw26I GTCTC 8 cut(s) 356, 1028, 1486, 1813, 1954, 1987, 2469, 3156
Alw44I GTGCAC 1 cut(s) 1188
AlwI GGATC 4 cut(s) 437, 601, 1097, 1668
AlwNI CAGNNNCTG 4 cut(s) 791, 1112, 2305, 3434
Ama87I CYCGRG 2 cut(s) 606, 1691
ApaLI GTGCAC 1 cut(s) 1188
ApeKI GCWGC 8 cut(s) 72, 479, 1112, 1134, 1985, 3015, 3424, 3566
ApoI RAATTY 5 cut(s) 448, 1440, 2007, 2479, 3601
Asp700I GAANNNNTTC 3 cut(s) 840, 2106, 2257
Asp718I GGTACC 1 cut(s) 3475
AspA2I CCTAGG 1 cut(s) 3548
AspLEI GCGC 8 cut(s) 202, 761, 828, 1134, 1278, 2787, 2926, 3352
AspS9I GGNCC 2 cut(s) 3086, 3296
AsuHPI GGTGA 6 cut(s) 113, 127, 755, 1190, 1532, 2981
AvaI CYCGRG 2 cut(s) 606, 1691
AvaII GGWCC 1 cut(s) 3296
AvrII CCTAGG 1 cut(s) 3548
AxyI CCTNAGG 2 cut(s) 108, 2860
BaeGI GKGCMC 5 cut(s) 290, 889, 1192, 3469, 3520
BaeI ACNNNNGTAYC 8 cut(s) 1416, 1449, 1725, 1758, 2517, 2550, 3134, 3167
BalI TGGCCA 4 cut(s) 1343, 2219, 2402, 3338
BanI GGYRCC 7 cut(s) 505, 1275, 3236, 3466, 3475, 3517, 3526
BarI GAAGNNNNNNTAC 2 cut(s) 3016, 3048
BauI CACGAG 2 cut(s) 621, 2091
BbrPI CACGTG 1 cut(s) 2267
BbsI GAAGAC 1 cut(s) 278
Bbv12I GWGCWC 6 cut(s) 638, 1069, 1149, 1192, 1312, 1864
BbvCI CCTCAGC 1 cut(s) 1256
BbvI GCAGC 8 cut(s) 59, 491, 1099, 1146, 1972, 3002, 3436, 3553
BceAI ACGGC 3 cut(s) 14, 28, 268
BcgI CGANNNNNNTGC 4 cut(s) 73, 107, 1967, 2001
BciT130I CCWGG 4 cut(s) 99, 890, 2469, 3241
BciVI GTATCC 1 cut(s) 221
BclI TGATCA 2 cut(s) 390, 1092
BcoDI GTCTC 8 cut(s) 356, 1028, 1486, 1813, 1954, 1987, 2469, 3156
BfaI CTAG 8 cut(s) 174, 782, 971, 1185, 2523, 2792, 3273, 3549
BfmI CTRYAG 4 cut(s) 495, 627, 1205, 1997
BfoI RGCGCY 1 cut(s) 1279
BfrI CTTAAG 2 cut(s) 1745, 2114
BfuAI ACCTGC 1 cut(s) 776
BfuI GTATCC 1 cut(s) 221
BglII AGATCT 1 cut(s) 2360
BlnI CCTAGG 1 cut(s) 3548
BmcAI AGTACT 1 cut(s) 2932
Bme1390I CCNGG 4 cut(s) 99, 890, 2469, 3241
Bme18I GGWCC 1 cut(s) 3296
BmeT110I CYCGRG 2 cut(s) 606, 1691
BmgBI CACGTC 1 cut(s) 1496
BmgT120I GGNCC 2 cut(s) 3086, 3296
BmiI GGNNCC 8 cut(s) 507, 1277, 3079, 3238, 3468, 3477, 3519, 3528
BmrFI CCNGG 4 cut(s) 99, 890, 2469, 3241
BpiI GAAGAC 1 cut(s) 278
BplI GAGNNNNNCTC 2 cut(s) 1376, 1408
BpmI CTGGAG 3 cut(s) 2964, 3093, 3138
Bpu10I CCTNAGC 4 cut(s) 1256, 1320, 2699, 3171
BpuEI CTTGAG 4 cut(s) 1929, 2345, 3158, 3483
BsaAI YACGTR 1 cut(s) 2267
BsaHI GRCGYC 1 cut(s) 1276
BsaI GGTCTC 2 cut(s) 1028, 3156
BsaXI ACNNNNNCTCC 4 cut(s) 413, 443, 3394, 3424
Bsc4I CCNNNNNNNGG 4 cut(s) 1084, 1593, 3095, 3461
Bse118I RCCGGY 1 cut(s) 3641
Bse1I ACTGG 8 cut(s) 210, 319, 1106, 1344, 1400, 1662, 3076, 3402
Bse21I CCTNAGG 2 cut(s) 108, 2860
Bse3DI GCAATG 1 cut(s) 3561
BseBI CCWGG 4 cut(s) 99, 890, 2469, 3241
BseLI CCNNNNNNNGG 4 cut(s) 1084, 1593, 3095, 3461
BseMI GCAATG 1 cut(s) 3561
BseNI ACTGG 8 cut(s) 210, 319, 1106, 1344, 1400, 1662, 3076, 3402
BseRI GAGGAG 1 cut(s) 3090
BseSI GKGCMC 5 cut(s) 290, 889, 1192, 3469, 3520
BseXI GCAGC 8 cut(s) 59, 491, 1099, 1146, 1972, 3002, 3436, 3553
BseYI CCCAGC 1 cut(s) 1592
BsgI GTGCAG 2 cut(s) 58, 834
BshNI GGYRCC 7 cut(s) 505, 1275, 3236, 3466, 3475, 3517, 3526
BsiHKAI GWGCWC 6 cut(s) 638, 1069, 1149, 1192, 1312, 1864
BsiHKCI CYCGRG 2 cut(s) 606, 1691
BsiSI CCGG 2 cut(s) 3006, 3642
BslFI GGGAC 2 cut(s) 136, 3208
BslI CCNNNNNNNGG 4 cut(s) 1084, 1593, 3095, 3461
BsmAI GTCTC 8 cut(s) 356, 1028, 1486, 1813, 1954, 1987, 2469, 3156
BsmBI CGTCTC 1 cut(s) 1486
BsmFI GGGAC 2 cut(s) 136, 3208
BsmI GAATGC 4 cut(s) 20, 840, 2725, 3259
Bso31I GGTCTC 2 cut(s) 1028, 3156
BsoBI CYCGRG 2 cut(s) 606, 1691
Bsp19I CCATGG 3 cut(s) 223, 687, 2529
BspHI TCATGA 2 cut(s) 1768, 2350
BspLI GGNNCC 8 cut(s) 507, 1277, 3079, 3238, 3468, 3477, 3519, 3528
BspMAI CTGCAG 1 cut(s) 1209
BspMI ACCTGC 1 cut(s) 776
BspPI GGATC 4 cut(s) 437, 601, 1097, 1668
BspQI GCTCTTC 2 cut(s) 2379, 2559
BspT107I GGYRCC 7 cut(s) 505, 1275, 3236, 3466, 3475, 3517, 3526
BspTI CTTAAG 2 cut(s) 1745, 2114
BspTNI GGTCTC 2 cut(s) 1028, 3156
BsrBI CCGCTC 3 cut(s) 796, 2374, 2575
BsrDI GCAATG 1 cut(s) 3561
BsrFI RCCGGY 1 cut(s) 3641
BsrI ACTGG 8 cut(s) 210, 319, 1106, 1344, 1400, 1662, 3076, 3402
BssAI RCCGGY 1 cut(s) 3641
BssNAI GTATAC 1 cut(s) 279
BssNI GRCGYC 1 cut(s) 1276
BssSI CACGAG 2 cut(s) 621, 2091
BssT1I CCWWGG 5 cut(s) 223, 687, 2403, 2529, 3548
Bst1107I GTATAC 1 cut(s) 279
Bst2BI CACGAG 2 cut(s) 621, 2091
Bst2UI CCWGG 4 cut(s) 99, 890, 2469, 3241
Bst6I CTCTTC 6 cut(s) 224, 1026, 1650, 1806, 2379, 2559
BstACI GRCGYC 1 cut(s) 1276
BstAFI CTTAAG 2 cut(s) 1745, 2114
BstAPI GCANNNNNTGC 1 cut(s) 81
BstBAI YACGTR 1 cut(s) 2267
BstDSI CCRYGG 4 cut(s) 223, 687, 1174, 2529
BstH2I RGCGCY 1 cut(s) 1279
BstHHI GCGC 8 cut(s) 202, 761, 828, 1134, 1278, 2787, 2926, 3352
BstMAI GTCTC 8 cut(s) 356, 1028, 1486, 1813, 1954, 1987, 2469, 3156
BstNI CCWGG 4 cut(s) 99, 890, 2469, 3241
BstNSI RCATGY 5 cut(s) 671, 826, 926, 1420, 2509
BstSCI CCNGG 4 cut(s) 97, 888, 2467, 3239
BstSFI CTRYAG 4 cut(s) 495, 627, 1205, 1997
BstSLI GKGCMC 5 cut(s) 290, 889, 1192, 3469, 3520
BstV1I GCAGC 8 cut(s) 59, 491, 1099, 1146, 1972, 3002, 3436, 3553
BstV2I GAAGAC 1 cut(s) 278
BstX2I RGATCY 1 cut(s) 2360
BstYI RGATCY 1 cut(s) 2360
BstZ17I GTATAC 1 cut(s) 279
Bsu36I CCTNAGG 2 cut(s) 108, 2860
BsuI GTATCC 1 cut(s) 221
BtgI CCRYGG 4 cut(s) 223, 687, 1174, 2529
BtgZI GCGATG 1 cut(s) 1992
BtrI CACGTC 1 cut(s) 1496
BtsI GCAGTG 2 cut(s) 164, 1095
BtsIMutI CAGTG 7 cut(s) 164, 186, 203, 312, 534, 1095, 2989
BveI ACCTGC 1 cut(s) 776
CaiI CAGNNNCTG 4 cut(s) 791, 1112, 2305, 3434
CciI TCATGA 2 cut(s) 1768, 2350
CfoI GCGC 8 cut(s) 202, 761, 828, 1134, 1278, 2787, 2926, 3352
Cfr10I RCCGGY 1 cut(s) 3641
Cfr13I GGNCC 2 cut(s) 3086, 3296
Csp6I GTAC 3 cut(s) 2931, 3143, 3476
CviQI GTAC 3 cut(s) 2931, 3143, 3476
DinI GGCGCC 1 cut(s) 1277
DraI TTTAAA 2 cut(s) 1050, 2166
DraIII CACNNNGTG 2 cut(s) 1225, 1307
EaeI YGGCCR 6 cut(s) 27, 253, 1341, 2217, 2400, 3336
Eam1104I CTCTTC 6 cut(s) 224, 1026, 1650, 1806, 2379, 2559
EarI CTCTTC 6 cut(s) 224, 1026, 1650, 1806, 2379, 2559
EciI GGCGGA 4 cut(s) 333, 933, 1529, 3402
Eco130I CCWWGG 5 cut(s) 223, 687, 2403, 2529, 3548
Eco147I AGGCCT 1 cut(s) 3271
Eco31I GGTCTC 2 cut(s) 1028, 3156
Eco32I GATATC 1 cut(s) 739
Eco47I GGWCC 1 cut(s) 3296
Eco57I CTGAAG 5 cut(s) 1253, 1781, 2093, 3233, 3459
Eco72I CACGTG 1 cut(s) 2267
Eco81I CCTNAGG 2 cut(s) 108, 2860
Eco88I CYCGRG 2 cut(s) 606, 1691
EcoRI GAATTC 1 cut(s) 3601
EcoRII CCWGG 4 cut(s) 97, 888, 2467, 3239
EcoRV GATATC 1 cut(s) 739
EcoT14I CCWWGG 5 cut(s) 223, 687, 2403, 2529, 3548
EcoT22I ATGCAT 3 cut(s) 2151, 2736, 3259
EgeI GGCGCC 1 cut(s) 1277
EheI GGCGCC 1 cut(s) 1277
ErhI CCWWGG 5 cut(s) 223, 687, 2403, 2529, 3548
Esp3I CGTCTC 1 cut(s) 1486
FalI AAGNNNNNCTT 2 cut(s) 2091, 2123
FaqI GGGAC 2 cut(s) 136, 3208
FauI CCCGC 3 cut(s) 15, 789, 2568
FbaI TGATCA 2 cut(s) 390, 1092
FblI GTMKAC 1 cut(s) 278
FspBI CTAG 8 cut(s) 174, 782, 971, 1185, 2523, 2792, 3273, 3549
FspI TGCGCA 4 cut(s) 760, 1133, 2786, 2925
GlaI GCGC 8 cut(s) 201, 760, 827, 1133, 1277, 2786, 2925, 3351
GsaI CCCAGC 1 cut(s) 1596
GsuI CTGGAG 3 cut(s) 2964, 3093, 3138
HaeII RGCGCY 1 cut(s) 1279
HapII CCGG 2 cut(s) 3006, 3642
HhaI GCGC 8 cut(s) 202, 761, 828, 1134, 1278, 2787, 2926, 3352
Hin1I GRCGYC 1 cut(s) 1276
Hin6I GCGC 8 cut(s) 200, 759, 826, 1132, 1276, 2785, 2924, 3350
HinP1I GCGC 8 cut(s) 200, 759, 826, 1132, 1276, 2785, 2924, 3350
HincII GTYRAC 3 cut(s) 778, 948, 1501
HindII GTYRAC 3 cut(s) 778, 948, 1501
HindIII AAGCTT 2 cut(s) 3491, 3542
HpaI GTTAAC 1 cut(s) 948
HpaII CCGG 2 cut(s) 3006, 3642
HphI GGTGA 6 cut(s) 113, 127, 755, 1190, 1532, 2981
Hpy99I CGWCG 1 cut(s) 95
HpyCH4IV ACGT 5 cut(s) 275, 1495, 2266, 2434, 3332
HpySE526I ACGT 5 cut(s) 275, 1495, 2266, 2434, 3332
Hsp92I GRCGYC 1 cut(s) 1276
HspAI GCGC 8 cut(s) 200, 759, 826, 1132, 1276, 2785, 2924, 3350
KasI GGCGCC 1 cut(s) 1275
KpnI GGTACC 1 cut(s) 3479
Ksp22I TGATCA 2 cut(s) 390, 1092
KspAI GTTAAC 1 cut(s) 948
LguI GCTCTTC 2 cut(s) 2379, 2559
Lsp1109I GCAGC 8 cut(s) 59, 491, 1099, 1146, 1972, 3002, 3436, 3553
MaeI CTAG 8 cut(s) 174, 782, 971, 1185, 2523, 2792, 3273, 3549
MaeII ACGT 5 cut(s) 275, 1495, 2266, 2434, 3332
MaeIII GTNAC 7 cut(s) 556, 957, 1119, 2335, 2613, 3243, 3400
MbiI CCGCTC 3 cut(s) 796, 2374, 2575
MfeI CAATTG 3 cut(s) 1124, 2036, 2549
MflI RGATCY 1 cut(s) 2360
MlsI TGGCCA 4 cut(s) 1343, 2219, 2402, 3338
MluNI TGGCCA 4 cut(s) 1343, 2219, 2402, 3338
Mly113I GGCGCC 1 cut(s) 1276
MlyI GAGTC 8 cut(s) 118, 1385, 2017, 2069, 2341, 2831, 2933, 3011
MmeI TCCRAC 3 cut(s) 2578, 2688, 3418
Mox20I TGGCCA 4 cut(s) 1343, 2219, 2402, 3338
Mph1103I ATGCAT 3 cut(s) 2151, 2736, 3259
MroXI GAANNNNTTC 3 cut(s) 840, 2106, 2257
MscI TGGCCA 4 cut(s) 1343, 2219, 2402, 3338
MslI CAYNNNNRTG 4 cut(s) 641, 2775, 3485, 3536
Msp20I TGGCCA 4 cut(s) 1343, 2219, 2402, 3338
MspA1I CMGCKG 2 cut(s) 1016, 3566
MspCI CTTAAG 2 cut(s) 1745, 2114
MspI CCGG 2 cut(s) 3006, 3642
MspR9I CCNGG 4 cut(s) 99, 890, 2469, 3241
MunI CAATTG 3 cut(s) 1124, 2036, 2549
Mva1269I GAATGC 4 cut(s) 20, 840, 2725, 3259
MvaI CCWGG 4 cut(s) 99, 890, 2469, 3241
NarI GGCGCC 1 cut(s) 1276
NcoI CCATGG 3 cut(s) 223, 687, 2529
NlaIV GGNNCC 8 cut(s) 507, 1277, 3079, 3238, 3468, 3477, 3519, 3528
NmuCI GTSAC 2 cut(s) 556, 2335
NsbI TGCGCA 4 cut(s) 760, 1133, 2786, 2925
NsiI ATGCAT 3 cut(s) 2151, 2736, 3259
NspI RCATGY 5 cut(s) 671, 826, 926, 1420, 2509
PaeI GCATGC 1 cut(s) 826
PaeR7I CTCGAG 2 cut(s) 606, 1691
PagI TCATGA 2 cut(s) 1768, 2350
PasI CCCWGGG 1 cut(s) 889
PceI AGGCCT 1 cut(s) 3271
PciI ACATGT 1 cut(s) 922
PciSI GCTCTTC 2 cut(s) 2379, 2559
PctI GAATGC 4 cut(s) 20, 840, 2725, 3259
PdmI GAANNNNTTC 3 cut(s) 840, 2106, 2257
PflMI CCANNNNNTGG 1 cut(s) 3095
PleI GAGTC 8 cut(s) 118, 1385, 2017, 2068, 2341, 2831, 2933, 3010
PluTI GGCGCC 1 cut(s) 1279
PmaCI CACGTG 1 cut(s) 2267
PmlI CACGTG 1 cut(s) 2267
PpsI GAGTC 8 cut(s) 118, 1385, 2017, 2068, 2341, 2831, 2933, 3010
Ppu21I YACGTR 1 cut(s) 2267
PscI ACATGT 1 cut(s) 922
Psp6I CCWGG 4 cut(s) 97, 888, 2467, 3239
PspCI CACGTG 1 cut(s) 2267
PspFI CCCAGC 1 cut(s) 1592
PspGI CCWGG 4 cut(s) 97, 888, 2467, 3239
PspN4I GGNNCC 8 cut(s) 507, 1277, 3079, 3238, 3468, 3477, 3519, 3528
PspPI GGNCC 2 cut(s) 3086, 3296
PspXI VCTCGAGB 1 cut(s) 606
PstI CTGCAG 1 cut(s) 1209
PstNI CAGNNNCTG 4 cut(s) 791, 1112, 2305, 3434
PsuI RGATCY 1 cut(s) 2360
PvuII CAGCTG 2 cut(s) 1016, 3566
RsaI GTAC 3 cut(s) 2932, 3144, 3477
RsaNI GTAC 3 cut(s) 2931, 3143, 3476
RseI CAYNNNNRTG 4 cut(s) 641, 2775, 3485, 3536
SapI GCTCTTC 2 cut(s) 2379, 2559
Sau96I GGNCC 2 cut(s) 3086, 3296
ScaI AGTACT 1 cut(s) 2932
SchI GAGTC 8 cut(s) 118, 1385, 2017, 2069, 2341, 2831, 2933, 3011
ScrFI CCNGG 4 cut(s) 99, 890, 2469, 3241
SfcI CTRYAG 4 cut(s) 495, 627, 1205, 1997
SfoI GGCGCC 1 cut(s) 1277
Sfr274I CTCGAG 2 cut(s) 606, 1691
SinI GGWCC 1 cut(s) 3296
SlaI CTCGAG 2 cut(s) 606, 1691
SmiMI CAYNNNNRTG 4 cut(s) 641, 2775, 3485, 3536
SmlI CTYRAG 8 cut(s) 606, 1691, 1745, 1944, 2114, 2324, 3137, 3498
SmoI CTYRAG 8 cut(s) 606, 1691, 1745, 1944, 2114, 2324, 3137, 3498
SphI GCATGC 1 cut(s) 826
SseBI AGGCCT 1 cut(s) 3271
SspDI GGCGCC 1 cut(s) 1275
SspI AATATT 1 cut(s) 1568
SspMI CTAG 8 cut(s) 174, 782, 971, 1185, 2523, 2792, 3273, 3549
StuI AGGCCT 1 cut(s) 3271
StyD4I CCNGG 4 cut(s) 97, 888, 2467, 3239
StyI CCWWGG 5 cut(s) 223, 687, 2403, 2529, 3548
TaiI ACGT 5 cut(s) 278, 1498, 2269, 2437, 3335
TaqI TCGA 5 cut(s) 607, 1236, 1692, 2319, 3064
TatI WGTACW 1 cut(s) 2930
TauI GCSGC 2 cut(s) 2377, 3673
TscAI CASTG 7 cut(s) 171, 186, 210, 319, 534, 1095, 2989
TseFI GTSAC 2 cut(s) 556, 2335
TseI GCWGC 8 cut(s) 72, 479, 1112, 1134, 1985, 3015, 3424, 3566
Tsp45I GTSAC 2 cut(s) 556, 2335
TspGWI ACGGA 4 cut(s) 79, 92, 395, 2815
TspRI CASTG 7 cut(s) 171, 186, 210, 319, 534, 1095, 2989
Van91I CCANNNNNTGG 1 cut(s) 3095
Vha464I CTTAAG 2 cut(s) 1745, 2114
VneI GTGCAC 1 cut(s) 1188
VpaK11BI GGWCC 1 cut(s) 3296
XapI RAATTY 5 cut(s) 448, 1440, 2007, 2479, 3601
XceI RCATGY 5 cut(s) 671, 826, 926, 1420, 2509
XcmI CCANNNNNNNNNTGG 3 cut(s) 263, 2536, 3394
XhoI CTCGAG 2 cut(s) 606, 1691
XmaJI CCTAGG 1 cut(s) 3548
XmiI GTMKAC 1 cut(s) 278
XmnI GAANNNNTTC 3 cut(s) 840, 2106, 2257
XspI CTAG 8 cut(s) 174, 782, 971, 1185, 2523, 2792, 3273, 3549
ZrmI AGTACT 1 cut(s) 2932
Zsp2I ATGCAT 3 cut(s) 2151, 2736, 3259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.