Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002682

Physical Location & Seq

Genomic Coordinates Forward (+)

28323880 .. 28328941

Gene Structure 5062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008287

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGCAGCTTCACTGCTTAGGAGTTCTCTTCAACTGTCAGCAGAGTAATCCTTTTGCTCACATTAGAGACAAAAATGGCCTCATTACCAATCTTGTTTCAGGTCTTCAATTACCAAGTGAAGAGATTCGGGGAGAAATTCTGTTTTTTCTGTACAAAGTATCTGCTCTCCACTATGCATCAGAGGATGCTGATGGATCTGATCTTTTATTTTCCTTTTGCCCCAAGCTAGTGCGCCTGTCTCTGGAGGCCCTCATGAAGTCCCAAAGTGATGACGTCCACTTGAATTGTATAGGCACTTCATCCAGAGAAATCCAAGTACTAGTTGAAGAAAACATTGCAGATTATGTGTTTGAAATACTGAGATTGTCAGAATGCAAGGATACGACTGTCAAATCTTGCCTTCAGTCTTTACATGATGAAAGACTTGCGGATGATAAGATGGTTTTAGCCTCTATGGAGCAATATATTTTGGTCAACAGTAGTGATCTCCAAAGTGGAGCCACTGATTCGTTCACAGTGATGATGCTGTTGTTTCTTTACGGCCTTTATAGGGGTCTTGCCGAGGTTAGCTACCAAATCCCCCATAGTCCAGAAGCTGAAAGAGTCCTGTTTCAGATAGTAACTGAAAATGATTGGGATTTGTCTTCTGCAAGAATTCATCCAATATCATTGAAATGGTTCTTTCTACAAGAGAAATTGAGAAACTCATTGTCTTATCAGCTTCTGAAATTTTGCAGAAGGAATACATCAAATGGCTCTGAAATCACTGCCCAGGGAAAGAATAGTCATATATTAAATGTTAATGCAATTGCAGAGTTAATAGTAGGAGAACATAGTTATGGCGCCACAATTTTGGTGTGCTTATTGACAGAGCTTGTTCAAACAGAAGGTCAAGAGCAAGAGATAATTTCTGTAGTCAATCTCATGGCAACAATTGTCGACATATATCCAACAATTTCAGACCAGTTATGCTTTCTTGGTATTGGAAATGCAGCTCGTGCTCTTTATTGTGAGTCCTCCTATACACAGTCCCCACAGATATCTGCAGTTGCTGATTGTGAAGTGCTCACAGAAGCTTCAAAAACCATCATTTTCAGTAGTTCTCTAGTCTCTACAATCAACAGTGCAGTTCATGCAGCATGTCCTAAGGGGCCAGCATTGGTTGACCATGATGAAGGAACAAACTCTGGAGAAATTTTGATATTTGTGCTTCTTCTAAATTACTTCACTTTAAGAAGTTTGCACATTGTTGTACCAGGGATTATGGACTGGAAAGTTTTCCTAGATCCCTCAGGTAGGATGCAGTCATTTTCCTTTATTGGCATCTACTGCCATGACCCGTGCAGACTAATGCATTTTGGCTCTCCTATGGTCAAGCTTGCTGCTTCATACTGCCTGTTGGAGTTGTTTACCAGAATATCTGAGCAGAGGAATAGAACAGGGGAGGAGTTGCTATGTGCCACGAAGTACCTTAGTTCTGTAATGGCTGTATCAGAAGGCTTAGTTTTCTACAGTGACCTCAGAGTGGCTATGAATTGTGGCCTGTGCCAGTCAATGCTCATGGGCTGGGAATTTCCGGACATGCATCAGACAAGTGTGGATGCAAAGAATACTTGGAGTGGGATGGTTGTGGAAGAGCTCACAATGTCTCTAGCTGTCCCGTGCCTGGCATCAAAATCTTTCATTAATCTTCACAAGCCTGCAATTCATGTTGCAGTTGCTCTGTTAAAACTGCAGAAGATTCCTAAGTGGATGAGATCTGTATTTGATGATACTTGCATATCTAGCATAAGTCAAAACCTTGCGGCTAATAATCTGAGCACAGAAATTGTCCTCTTATTTCAAGCTCTATTGAACTCAGAGTTCTTAAAGATGGAACAAATTGCTAGCTTAAATCAGTTGCTCCAGGTGACCATTCCTAACCATGCTCTTTCTGTTCTCTTATGTTTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

652

Amino Acids

72.47

Weight (kDa)

5.17

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14180 AT4G14180
fragaria_vesca	FvH4_4g12860
malus_domestica	MD04G1022200.v1.1
prunus_persica	Prupe.1G172400_v2.0.a1 Prupe.1G176200_v2.0.a1
pyrus_communis	pycom04g01870
rosa_chinensis	RchiOBHm_Chr4g0412451 RchiOBHm_Chr4g0412511
rosa_laevigata	RLG00000008284 RLG00000008287 RLG00000008289 RLG00000008295 RLG00000008298
rosa_multiflora	Rmu_sc0002604.1_g000020 Rmu_sc0003914.1_g000006 Rmu_sc0005615.1_g000012
rosa_roxburghii	Rroxscaffold_161G00448090 Rroxscaffold_2G00117420 Rroxscaffold_4G00325160 Rroxscaffold_5G00356600 Rroxscaffold_5G00356610 Rroxscaffold_5G00356660 Rroxscaffold_5G00356680 Rroxscaffold_5G00356720 Rroxscaffold_7G00197050
rosa_rugosa	Rorug04G0103300 Rorug04G0103400 Rorug04G0103700.1
rosa_samantha	Rh4AG173200 Rh4AG173600 Rh4BG173100 Rh4CG184000 Rh4CG184500 Rh4DG167600 Rh4DG168300 Rh4DG168400 Rh4DG168900
rosa_wichuraiana	Rw4G014490 Rw4G014550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	276
AccB1I	GGYRCC	1 cut(s)	842
AccI	GTMKAC	1 cut(s)	939
AccIII	TCCGGA	1 cut(s)	1576
AciI	CCGC	2 cut(s)	428, 1805
AclWI	GGATC	2 cut(s)	202, 1280
AcsI	RAATTY	5 cut(s)	135, 654, 728, 1194, 1571
AcuI	CTGAAG	1 cut(s)	386
AcyI	GRCGYC	2 cut(s)	273, 843
AfaI	GTAC	4 cut(s)	152, 318, 1254, 1469
AfiI	CCNNNNNNNGG	5 cut(s)	241, 550, 1296, 1525, 1666
AhlI	ACTAGT	1 cut(s)	319
AjnI	CCWGG	4 cut(s)	771, 1255, 1665, 1905
Alw21I	GWGCWC	4 cut(s)	1003, 1068, 1641, 1823
Alw26I	GTCTC	4 cut(s)	60, 243, 1114, 1653
AlwI	GGATC	2 cut(s)	202, 1280
AlwNI	CAGNNNCTG	3 cut(s)	596, 724, 1052
Aor13HI	TCCGGA	1 cut(s)	1576
AoxI	GGCC	5 cut(s)	76, 246, 541, 1151, 1540
ApeKI	GCWGC	4 cut(s)	4, 992, 1136, 1382
ApoI	RAATTY	5 cut(s)	135, 654, 728, 1194, 1571
ArsI	GACNNNNNNTTYG	2 cut(s)	874, 906
AseI	ATTAAT	1 cut(s)	1686
Asp700I	GAANNNNTTC	3 cut(s)	123, 677, 1277
AspLEI	GCGC	2 cut(s)	234, 845
AspS9I	GGNCC	2 cut(s)	247, 1151
AsuHPI	GGTGA	1 cut(s)	1921
AsuNHI	GCTAGC	1 cut(s)	1886
AxyI	CCTNAGG	2 cut(s)	1146, 1291
BaeI	ACNNNNGTAYC	2 cut(s)	372, 405
BanI	GGYRCC	1 cut(s)	842
BanII	GRGCYC	1 cut(s)	1641
BarI	GAAGNNNNNNTAC	2 cut(s)	280, 312
BauI	CACGAG	1 cut(s)	996
BbsI	GAAGAC	2 cut(s)	95, 636
Bbv12I	GWGCWC	4 cut(s)	1003, 1068, 1641, 1823
BbvI	GCAGC	4 cut(s)	16, 1004, 1148, 1369
BccI	CCATC	5 cut(s)	185, 433, 1094, 1618, 1867
BceAI	ACGGC	1 cut(s)	556
BciT130I	CCWGG	4 cut(s)	773, 1257, 1667, 1907
BciVI	GTATCC	1 cut(s)	373
BcoDI	GTCTC	4 cut(s)	60, 243, 1114, 1653
BcuI	ACTAGT	1 cut(s)	319
BfaI	CTAG	7 cut(s)	227, 320, 1106, 1283, 1652, 1785, 1887
BfmI	CTRYAG	4 cut(s)	912, 1044, 1510, 1733
BfoI	RGCGCY	1 cut(s)	846
BfuI	GTATCC	1 cut(s)	373
BglII	AGATCT	1 cut(s)	1757
BisI	GCNGC	5 cut(s)	5, 993, 1137, 1383, 1806
BlsI	GCNGC	5 cut(s)	6, 994, 1138, 1384, 1807
BmcAI	AGTACT	1 cut(s)	318
Bme1390I	CCNGG	4 cut(s)	773, 1257, 1667, 1907
BmgT120I	GGNCC	2 cut(s)	247, 1151
BmiI	GGNNCC	3 cut(s)	499, 844, 1152
BmrFI	CCNGG	4 cut(s)	773, 1257, 1667, 1907
BmsI	GCATC	8 cut(s)	175, 185, 513, 1290, 1332, 1591, 1594, 1679
BmtI	GCTAGC	1 cut(s)	1890
BpiI	GAAGAC	2 cut(s)	95, 636
BpmI	CTGGAG	3 cut(s)	263, 1209, 1889
Bpu10I	CCTNAGC	1 cut(s)	16
BsaHI	GRCGYC	2 cut(s)	273, 843
BsaJI	CCNNGG	4 cut(s)	561, 771, 772, 1256
BsaWI	WCCGGW	1 cut(s)	1576
Bsc4I	CCNNNNNNNGG	5 cut(s)	241, 550, 1296, 1525, 1666
Bse1I	ACTGG	3 cut(s)	964, 1274, 1549
Bse21I	CCTNAGG	2 cut(s)	1146, 1291
Bse3DI	GCAATG	1 cut(s)	333
BseAI	TCCGGA	1 cut(s)	1576
BseBI	CCWGG	4 cut(s)	773, 1257, 1667, 1907
BseDI	CCNNGG	4 cut(s)	561, 771, 772, 1256
BseGI	GGATG	8 cut(s)	190, 299, 436, 658, 1305, 1606, 1629, 1758
BseLI	CCNNNNNNNGG	5 cut(s)	241, 550, 1296, 1525, 1666
BseMI	GCAATG	1 cut(s)	333
BseMII	CTCAG	6 cut(s)	350, 1305, 1413, 1534, 1808, 1872
BseNI	ACTGG	3 cut(s)	964, 1274, 1549
BseRI	GAGGAG	1 cut(s)	1460
BseXI	GCAGC	4 cut(s)	16, 1004, 1148, 1369
BseYI	CCCAGC	1 cut(s)	1566
BsgI	GTGCAG	2 cut(s)	1146, 1363
BshFI	GGCC	5 cut(s)	78, 248, 543, 1153, 1542
BshNI	GGYRCC	1 cut(s)	842
BsiHKAI	GWGCWC	4 cut(s)	1003, 1068, 1641, 1823
BsiSI	CCGG	1 cut(s)	1577
BslFI	GGGAC	3 cut(s)	244, 1015, 1643
BslI	CCNNNNNNNGG	5 cut(s)	241, 550, 1296, 1525, 1666
BsmAI	GTCTC	4 cut(s)	60, 243, 1114, 1653
BsmFI	GGGAC	3 cut(s)	244, 1015, 1643
BsmI	GAATGC	1 cut(s)	377
BsnI	GGCC	5 cut(s)	78, 248, 543, 1153, 1542
Bsp1286I	GDGCHC	4 cut(s)	1003, 1068, 1641, 1823
Bsp13I	TCCGGA	1 cut(s)	1576
Bsp1407I	TGTACA	1 cut(s)	150
Bsp143I	GATC	5 cut(s)	194, 199, 484, 1285, 1757
BspACI	CCGC	2 cut(s)	428, 1805
BspANI	GGCC	5 cut(s)	78, 248, 543, 1153, 1542
BspCNI	CTCAG	6 cut(s)	351, 1304, 1414, 1533, 1809, 1871
BspEI	TCCGGA	1 cut(s)	1576
BspHI	TCATGA	1 cut(s)	252
BspLI	GGNNCC	3 cut(s)	499, 844, 1152
BspMAI	CTGCAG	2 cut(s)	1048, 1737
BspOI	GCTAGC	1 cut(s)	1890
BspPI	GGATC	2 cut(s)	202, 1280
BspQI	GCTCTTC	1 cut(s)	1629
BspT107I	GGYRCC	1 cut(s)	842
BsrDI	GCAATG	1 cut(s)	333
BsrGI	TGTACA	1 cut(s)	150
BsrI	ACTGG	3 cut(s)	964, 1274, 1549
BssECI	CCNNGG	4 cut(s)	561, 771, 772, 1256
BssMI	GATC	5 cut(s)	194, 199, 484, 1285, 1757
BssNI	GRCGYC	2 cut(s)	273, 843
BssSI	CACGAG	1 cut(s)	996
Bst2BI	CACGAG	1 cut(s)	996
Bst2UI	CCWGG	4 cut(s)	773, 1257, 1667, 1907
Bst4CI	ACNGT	7 cut(s)	35, 388, 479, 517, 1029, 1124, 1514
Bst6I	CTCTTC	3 cut(s)	32, 114, 1629
BstACI	GRCGYC	2 cut(s)	273, 843
BstAPI	GCANNNNNTGC	3 cut(s)	998, 1133, 1329
BstAUI	TGTACA	1 cut(s)	150
BstC8I	GCNNGC	4 cut(s)	1155, 1380, 1701, 1888
BstEII	GGTNACC	1 cut(s)	1909
BstENI	CCTNNNNNAGG	1 cut(s)	1294
BstF5I	GGATG	8 cut(s)	190, 299, 436, 658, 1305, 1606, 1629, 1758
BstH2I	RGCGCY	1 cut(s)	846
BstHHI	GCGC	2 cut(s)	234, 845
BstKTI	GATC	5 cut(s)	197, 202, 487, 1288, 1760
BstMAI	GTCTC	4 cut(s)	60, 243, 1114, 1653
BstMBI	GATC	5 cut(s)	194, 199, 484, 1285, 1757
BstMWI	GCNNNNNNNGC	4 cut(s)	998, 1133, 1329, 1785
BstNI	CCWGG	4 cut(s)	773, 1257, 1667, 1907
BstNSI	RCATGY	2 cut(s)	1143, 1585
BstPI	GGTNACC	1 cut(s)	1909
BstSCI	CCNGG	4 cut(s)	771, 1255, 1665, 1905
BstSFI	CTRYAG	4 cut(s)	912, 1044, 1510, 1733
BstV1I	GCAGC	4 cut(s)	16, 1004, 1148, 1369
BstV2I	GAAGAC	2 cut(s)	95, 636
BstX2I	RGATCY	3 cut(s)	194, 1285, 1757
BstXI	CCANNNNNNTGG	1 cut(s)	853
BstYI	RGATCY	3 cut(s)	194, 1285, 1757
Bsu36I	CCTNAGG	2 cut(s)	1146, 1291
BsuI	GTATCC	1 cut(s)	373
BsuRI	GGCC	5 cut(s)	78, 248, 543, 1153, 1542
BtsCI	GGATG	8 cut(s)	190, 299, 436, 658, 1305, 1606, 1629, 1758
BtsI	GCAGTG	2 cut(s)	10, 765
BtsIMutI	CAGTG	6 cut(s)	10, 501, 522, 765, 1129, 1519
Cac8I	GCNNGC	4 cut(s)	1155, 1380, 1701, 1888
CaiI	CAGNNNCTG	3 cut(s)	596, 724, 1052
CciI	TCATGA	1 cut(s)	252
CfoI	GCGC	2 cut(s)	234, 845
Cfr13I	GGNCC	2 cut(s)	247, 1151
Csp6I	GTAC	4 cut(s)	151, 317, 1253, 1468
CspCI	CAANNNNNGTGG	2 cut(s)	266, 301
CviQI	GTAC	4 cut(s)	151, 317, 1253, 1468
DinI	GGCGCC	1 cut(s)	844
DpnI	GATC	5 cut(s)	196, 201, 486, 1287, 1759
DpnII	GATC	5 cut(s)	194, 199, 484, 1285, 1757
Eam1104I	CTCTTC	3 cut(s)	32, 114, 1629
EarI	CTCTTC	3 cut(s)	32, 114, 1629
Ecl136II	GAGCTC	1 cut(s)	1639
Eco24I	GRGCYC	1 cut(s)	1641
Eco32I	GATATC	1 cut(s)	1041
Eco53kI	GAGCTC	1 cut(s)	1639
Eco57I	CTGAAG	1 cut(s)	386
Eco81I	CCTNAGG	2 cut(s)	1146, 1291
Eco91I	GGTNACC	1 cut(s)	1909
EcoICRI	GAGCTC	1 cut(s)	1639
EcoNI	CCTNNNNNAGG	1 cut(s)	1294
EcoO109I	RGGNCCY	1 cut(s)	247
EcoO65I	GGTNACC	1 cut(s)	1909
EcoRI	GAATTC	1 cut(s)	654
EcoRII	CCWGG	4 cut(s)	771, 1255, 1665, 1905
EcoRV	GATATC	1 cut(s)	1041
EcoT22I	ATGCAT	3 cut(s)	178, 1356, 1587
EcoT38I	GRGCYC	1 cut(s)	1641
EgeI	GGCGCC	1 cut(s)	844
EheI	GGCGCC	1 cut(s)	844
FaqI	GGGAC	3 cut(s)	244, 1015, 1643
FblI	GTMKAC	1 cut(s)	939
Fnu4HI	GCNGC	5 cut(s)	5, 993, 1137, 1383, 1806
FokI	GGATG	8 cut(s)	197, 286, 443, 645, 1312, 1613, 1636, 1765
FriOI	GRGCYC	1 cut(s)	1641
Fsp4HI	GCNGC	5 cut(s)	5, 993, 1137, 1383, 1806
FspBI	CTAG	7 cut(s)	227, 320, 1106, 1283, 1652, 1785, 1887
GlaI	GCGC	2 cut(s)	233, 844
GluI	GCNGC	5 cut(s)	5, 993, 1137, 1383, 1806
GsaI	CCCAGC	1 cut(s)	1570
GsuI	CTGGAG	3 cut(s)	263, 1209, 1889
HaeII	RGCGCY	1 cut(s)	846
HaeIII	GGCC	5 cut(s)	78, 248, 543, 1153, 1542
HapII	CCGG	1 cut(s)	1577
HhaI	GCGC	2 cut(s)	234, 845
Hin1I	GRCGYC	2 cut(s)	273, 843
Hin6I	GCGC	2 cut(s)	232, 843
HinP1I	GCGC	2 cut(s)	232, 843
HincII	GTYRAC	3 cut(s)	475, 940, 1165
HindII	GTYRAC	3 cut(s)	475, 940, 1165
HindIII	AAGCTT	2 cut(s)	1074, 1376
HinfI	GANTC	5 cut(s)	124, 506, 603, 1013, 1741
HpaII	CCGG	1 cut(s)	1577
HphI	GGTGA	1 cut(s)	1921
Hpy166II	GTNNAC	6 cut(s)	277, 475, 513, 940, 1165, 1410
Hpy188III	TCNNGA	7 cut(s)	242, 253, 303, 590, 893, 1188, 1577
Hpy8I	GTNNAC	6 cut(s)	277, 475, 513, 940, 1165, 1410
HpyAV	CCTTC	5 cut(s)	410, 732, 881, 1169, 1490
HpyCH4III	ACNGT	7 cut(s)	35, 388, 479, 517, 1029, 1124, 1514
HpyCH4IV	ACGT	1 cut(s)	273
HpyF10VI	GCNNNNNNNGC	4 cut(s)	998, 1133, 1329, 1785
HpySE526I	ACGT	1 cut(s)	273
Hsp92I	GRCGYC	2 cut(s)	273, 843
HspAI	GCGC	2 cut(s)	232, 843
KasI	GGCGCC	1 cut(s)	842
Kpn2I	TCCGGA	1 cut(s)	1576
Kzo9I	GATC	5 cut(s)	194, 199, 484, 1285, 1757
LguI	GCTCTTC	1 cut(s)	1629
LmnI	GCTCC	3 cut(s)	457, 497, 1908
Lsp1109I	GCAGC	4 cut(s)	16, 1004, 1148, 1369
LweI	GCATC	8 cut(s)	175, 185, 513, 1290, 1332, 1591, 1594, 1679
MaeI	CTAG	7 cut(s)	227, 320, 1106, 1283, 1652, 1785, 1887
MaeII	ACGT	1 cut(s)	273
MaeIII	GTNAC	3 cut(s)	619, 1514, 1909
MalI	GATC	5 cut(s)	196, 201, 486, 1287, 1759
MboI	GATC	5 cut(s)	194, 199, 484, 1285, 1757
MboII	GAAGA	9 cut(s)	19, 95, 131, 338, 636, 1205, 1646, 1682, 1750
MfeI	CAATTG	2 cut(s)	807, 933
MflI	RGATCY	3 cut(s)	194, 1285, 1757
MhlI	GDGCHC	4 cut(s)	1003, 1068, 1641, 1823
Mly113I	GGCGCC	1 cut(s)	843
MlyI	GAGTC	2 cut(s)	612, 1022
MmeI	TCCRAC	2 cut(s)	974, 1380
Mph1103I	ATGCAT	3 cut(s)	178, 1356, 1587
MroI	TCCGGA	1 cut(s)	1576
MroXI	GAANNNNTTC	3 cut(s)	123, 677, 1277
MseI	TTAA	8 cut(s)	794, 801, 818, 1232, 1686, 1727, 1868, 1892
MslI	CAYNNNNRTG	3 cut(s)	518, 673, 837
MspI	CCGG	1 cut(s)	1577
MspR9I	CCNGG	4 cut(s)	773, 1257, 1667, 1907
MunI	CAATTG	2 cut(s)	807, 933
Mva1269I	GAATGC	1 cut(s)	377
MvaI	CCWGG	4 cut(s)	773, 1257, 1667, 1907
MwoI	GCNNNNNNNGC	4 cut(s)	998, 1133, 1329, 1785
NarI	GGCGCC	1 cut(s)	843
NdeII	GATC	5 cut(s)	194, 199, 484, 1285, 1757
NheI	GCTAGC	1 cut(s)	1886
NlaIV	GGNNCC	3 cut(s)	499, 844, 1152
NmeAIII	GCCGAG	1 cut(s)	586
NmuCI	GTSAC	2 cut(s)	1514, 1909
NsiI	ATGCAT	3 cut(s)	178, 1356, 1587
NspI	RCATGY	2 cut(s)	1143, 1585
PagI	TCATGA	1 cut(s)	252
PasI	CCCWGGG	1 cut(s)	772
PciSI	GCTCTTC	1 cut(s)	1629
PctI	GAATGC	1 cut(s)	377
PdmI	GAANNNNTTC	3 cut(s)	123, 677, 1277
PfeI	GAWTC	3 cut(s)	124, 506, 1741
PkrI	GCNGC	5 cut(s)	6, 994, 1138, 1384, 1807
PleI	GAGTC	2 cut(s)	611, 1021
PluTI	GGCGCC	1 cut(s)	846
PpsI	GAGTC	2 cut(s)	611, 1021
PshBI	ATTAAT	1 cut(s)	1686
Psp124BI	GAGCTC	1 cut(s)	1641
Psp6I	CCWGG	4 cut(s)	771, 1255, 1665, 1905
PspEI	GGTNACC	1 cut(s)	1909
PspFI	CCCAGC	1 cut(s)	1566
PspGI	CCWGG	4 cut(s)	771, 1255, 1665, 1905
PspN4I	GGNNCC	3 cut(s)	499, 844, 1152
PspPI	GGNCC	2 cut(s)	247, 1151
PstI	CTGCAG	2 cut(s)	1048, 1737
PstNI	CAGNNNCTG	3 cut(s)	596, 724, 1052
PsuI	RGATCY	3 cut(s)	194, 1285, 1757
RsaI	GTAC	4 cut(s)	152, 318, 1254, 1469
RsaNI	GTAC	4 cut(s)	151, 317, 1253, 1468
RseI	CAYNNNNRTG	3 cut(s)	518, 673, 837
SacI	GAGCTC	1 cut(s)	1641
SalI	GTCGAC	1 cut(s)	938
SapI	GCTCTTC	1 cut(s)	1629
SaqAI	TTAA	8 cut(s)	794, 801, 818, 1232, 1686, 1727, 1868, 1892
SatI	GCNGC	5 cut(s)	5, 993, 1137, 1383, 1806
Sau3AI	GATC	5 cut(s)	194, 199, 484, 1285, 1757
Sau96I	GGNCC	2 cut(s)	247, 1151
ScaI	AGTACT	1 cut(s)	318
SchI	GAGTC	2 cut(s)	612, 1022
ScrFI	CCNGG	4 cut(s)	773, 1257, 1667, 1907
SduI	GDGCHC	4 cut(s)	1003, 1068, 1641, 1823
SfaNI	GCATC	8 cut(s)	175, 185, 513, 1290, 1332, 1591, 1594, 1679
SfcI	CTRYAG	4 cut(s)	912, 1044, 1510, 1733
SfoI	GGCGCC	1 cut(s)	844
SmiMI	CAYNNNNRTG	3 cut(s)	518, 673, 837
SpeI	ACTAGT	1 cut(s)	319
SsiI	CCGC	2 cut(s)	428, 1805
SspDI	GGCGCC	1 cut(s)	842
SspMI	CTAG	7 cut(s)	227, 320, 1106, 1283, 1652, 1785, 1887
SstI	GAGCTC	1 cut(s)	1641
StyD4I	CCNGG	4 cut(s)	771, 1255, 1665, 1905
TaaI	ACNGT	7 cut(s)	35, 388, 479, 517, 1029, 1124, 1514
TaiI	ACGT	1 cut(s)	276
TaqI	TCGA	1 cut(s)	939
TatI	WGTACW	2 cut(s)	150, 316
TauI	GCSGC	1 cut(s)	1808
TfiI	GAWTC	3 cut(s)	124, 506, 1741
Tru1I	TTAA	8 cut(s)	794, 801, 818, 1232, 1686, 1727, 1868, 1892
Tru9I	TTAA	8 cut(s)	794, 801, 818, 1232, 1686, 1727, 1868, 1892
TscAI	CASTG	6 cut(s)	17, 508, 522, 772, 1129, 1519
TseFI	GTSAC	2 cut(s)	1514, 1909
TseI	GCWGC	4 cut(s)	4, 992, 1136, 1382
Tsp45I	GTSAC	2 cut(s)	1514, 1909
TspRI	CASTG	6 cut(s)	17, 508, 522, 772, 1129, 1519
VspI	ATTAAT	1 cut(s)	1686
XagI	CCTNNNNNAGG	1 cut(s)	1294
XapI	RAATTY	5 cut(s)	135, 654, 728, 1194, 1571
XceI	RCATGY	2 cut(s)	1143, 1585
XmiI	GTMKAC	1 cut(s)	939
XmnI	GAANNNNTTC	3 cut(s)	123, 677, 1277
XspI	CTAG	7 cut(s)	227, 320, 1106, 1283, 1652, 1785, 1887
ZraI	GACGTC	1 cut(s)	274
ZrmI	AGTACT	1 cut(s)	318
Zsp2I	ATGCAT	3 cut(s)	178, 1356, 1587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.