Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002682

Physical Location & Seq

Genomic Coordinates Reverse (-)

16121622 .. 16123914

Gene Structure 2293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0103300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGAGATAGTTGACAACGAAGATGTAACTAGTTGGGTGTGTGACAGCCTCTCAGTGCAACCTAACAAGATTCCATTATACATTACTCTGGAACGCAGCTTATCAAGATCTGTAAGTGGAAGTAATCAAGGCATGAATAGTAGACCTAACCCATCTTTTCAGTATGATGATGTTGTCTCAACAATGTTCTCTACTGAGCTTGAAGATCAGAGTCCAATTGCATTGAGTTCCCCGCATGAGCCAATAGTAGTAAACTCTGGGTTGGATAATGGTGATAATGTCTCATACGAAAATAGAGAGGAAGATGAGTTTCCACATGCCAATTGGGATAATGAGAGTCCAATGGACGATGTAGAAATTGAAACTGAGCAACCTACGAATGCTAACTCTACTCCATCATCTTCTTATCTTAGCAAGAGAAGGCGCATAGAAGACTATGAGAATGTTGCATTTGTGGACACCAATGAAGATATTTTGGTAGGTCAGTTATATCCGAGTAAGAAAGCCTTGAAACAACATTTGGGCATGCTCGCAATAAGAAAGAATTACGAGTTTAAAGTGAACAAATCAGCTAGTGATTGGTTTGAAGTTAGGTGTGTGGATCCTAACTGTAAGTGGCGACTCCGTGCAATAAAGCTACAAGACTTGGTCTATTTTGAAGTAAGAAAGTTTCATAATGAACATTCTTGTTCGTTGGATATTATTCATCGTGATCATCAACAAGCAAGCAGCTCCCTAATTGGTATCTTTGTCAAGTCAAAGTTTGAGGAAGGAACCTCGCGTATATACAGACCTAGAGATATCATTGATGATGCGCGTGTCCAACTTGGAGTTAATATGGGGTATAATAAAGCTTGGAGGGCAAGAGAAGCAGCACTAGAAATTGCAAGGGGATCACCAGAGGAATCATTTGCTATACTTCCAACATATTGTGCTATGTTAGAGCGCAAAAATCAAGGTACAATAACACACATAGAAACTGATGAACATAATCACTTTCTATACTTTTTCATGGCAATTGGAGCCTCAATTAGAGGATTTCGTGATTCTATGAGGCCCGTGATCGCTATAGATGGTACATTTTTGAAAGGAAAGTACTTTGGAACCATGTTTGTGGCTCCATGCCAAGATGGAGAGAATCAAATATATCCTTTGGCATTTGGGGTGGTAGACTCGGAAAATGATGCCTCATGGTCATGGTTTTTGACAAAATTGAGAGGGGCCATTGGAGTTGTAGAGAACTTGGTTTTTATATCTGATCGACATGGAAGCATTGCCAAAGCTGTGGATAATGTTTTTCCTGAAGCACATCATGGAGCCTGCATCTTTCATATAGCTAACAACCTGCAATCAAAGTTTGGCAAAAAAATGAAGATCCTCAAGTTATATTACACAGCAGCAAAGAAGTACCAAGTATCCGAGTTCAATACATTGATGGATGACATTCGAAAAATAAAAGATGGAGAAGTCTGTAAATATCTTGAAGACATTGGGTGTCATAAGTGGGCACGAGCTCATTTTATGGGGTACAGATACAACATGATGACATCCAACATTGCTGAATCTATGAACTCGAAGCTTAAAGATGCTAGAAAACTACCAATTACTGCTTTAGTGGATCACCTAAGAGAGGTGCTTCAACAATGGTTTGTTGAACGACGTGATGAAGCAAGCTCCCTTAATACACACTTAACCAAATGGGCAAAAGACAAAGTGCGCAAAAACAACAATAGTGGTTCGCATATGCGGGTGTCTCCAATTGATCTCTATGCATTTCAAATACATGATCAAAGTCAAACATTTACAGTGGACTTAAATAATATGACTTGTACATGTCGAGAGTTTGATCTTGATCGACTTCCTTGTGCCCATGCAACTGTTGCCTGTAGAACTAAAGGAATATCAGTGTATAGCATGTGCTCCCAATTTTACACAGCCAATGCACTTATGTTAGCGTATGCGGAGCTTATTTGGCCAGTTGGGAATAAAAGTGAGTGGGATGTGCCTGAAGACGTGCATAACAAAATTGTCTTACCACCAATAAGACAAGTAGTACCTGGAAGACGTAAGACTGTACGAATTCCATCTGTAGGAGAAGATGCAATTAGAAAAAAGTGTACAAGATGCGGTGGAGGAGGTCATAACCGTGCAACTTGCCAATGCGATCTTCCTATTAATGTTGTGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

729

Amino Acids

83.08

Weight (kDa)

6.46

Isoelectric Point (pI)

42.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DBD_Tnp_Mut	PF03108	159 - 221	5.8e-10	MuDR family transposase
MULE	PF10551	354 - 448	1.2e-24	MULE transposase domain
Transposase_mut	PF00872	376 - 531	1.5e-12	Transposase, Mutator family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14180 AT4G14180
fragaria_vesca	FvH4_4g12860
malus_domestica	MD04G1022200.v1.1
prunus_persica	Prupe.1G172400_v2.0.a1 Prupe.1G176200_v2.0.a1
pyrus_communis	pycom04g01870
rosa_chinensis	RchiOBHm_Chr4g0412451 RchiOBHm_Chr4g0412511
rosa_laevigata	RLG00000008284 RLG00000008287 RLG00000008289 RLG00000008295 RLG00000008298
rosa_multiflora	Rmu_sc0002604.1_g000020 Rmu_sc0003914.1_g000006 Rmu_sc0005615.1_g000012
rosa_roxburghii	Rroxscaffold_161G00448090 Rroxscaffold_2G00117420 Rroxscaffold_4G00325160 Rroxscaffold_5G00356600 Rroxscaffold_5G00356610 Rroxscaffold_5G00356660 Rroxscaffold_5G00356680 Rroxscaffold_5G00356720 Rroxscaffold_7G00197050
rosa_rugosa	Rorug04G0103300 Rorug04G0103400 Rorug04G0103700.1
rosa_samantha	Rh4AG173200 Rh4AG173600 Rh4BG173100 Rh4CG184000 Rh4CG184500 Rh4DG167600 Rh4DG168300 Rh4DG168400 Rh4DG168900
rosa_wichuraiana	Rw4G014490 Rw4G014550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1718
Acc36I	ACCTGC	1 cut(s)	1353
AccI	GTMKAC	2 cut(s)	142, 1170
AccII	CGCG	2 cut(s)	781, 817
AciI	CCGC	4 cut(s)	233, 1747, 1961, 2127
AclWI	GGATC	5 cut(s)	596, 609, 901, 1369, 1626
AcoI	YGGCCR	1 cut(s)	1973
AcsI	RAATTY	1 cut(s)	2079
AcuI	CTGAAG	2 cut(s)	1323, 2028
AfaI	GTAC	9 cut(s)	961, 1078, 1097, 1409, 1529, 1831, 2055, 2076, 2119
AfiI	CCNNNNNNNGG	2 cut(s)	1630, 2090
AflIII	ACRYGT	1 cut(s)	1832
AhlI	ACTAGT	1 cut(s)	29
AjiI	CACGTC	2 cut(s)	1661, 2014
AjnI	CCWGG	1 cut(s)	2056
AjuI	GAANNNNNNNTTGG	4 cut(s)	503, 535, 2151, 2183
Alw21I	GWGCWC	2 cut(s)	1516, 1922
Alw26I	GTCTC	3 cut(s)	181, 286, 1758
AlwI	GGATC	5 cut(s)	596, 609, 901, 1369, 1626
AoxI	GGCC	3 cut(s)	1055, 1221, 1973
ApeKI	GCWGC	4 cut(s)	96, 729, 872, 1397
ApoI	RAATTY	1 cut(s)	2079
AseI	ATTAAT	1 cut(s)	2175
AspLEI	GCGC	4 cut(s)	426, 817, 948, 1719
AspS9I	GGNCC	2 cut(s)	1056, 1221
AsuHPI	GGTGA	3 cut(s)	284, 888, 1613
AsuII	TTCGAA	1 cut(s)	1447
BaeGI	GKGCMC	2 cut(s)	1510, 1870
BalI	TGGCCA	1 cut(s)	1975
BamHI	GGATCC	1 cut(s)	601
BanII	GRGCYC	1 cut(s)	1516
BauI	CACGAG	1 cut(s)	1509
BbsI	GAAGAC	4 cut(s)	438, 1491, 2016, 2068
Bbv12I	GWGCWC	2 cut(s)	1516, 1922
BbvI	GCAGC	4 cut(s)	108, 741, 884, 1409
BccI	CCATC	7 cut(s)	160, 403, 1067, 1124, 1429, 1454, 2092
BciT130I	CCWGG	1 cut(s)	2058
BciVI	GTATCC	1 cut(s)	1426
BclI	TGATCA	2 cut(s)	712, 1786
BcoDI	GTCTC	3 cut(s)	181, 286, 1758
BcuI	ACTAGT	1 cut(s)	29
BfaI	CTAG	5 cut(s)	30, 573, 795, 878, 1590
BfmI	CTRYAG	3 cut(s)	1068, 1885, 2088
BfuAI	ACCTGC	1 cut(s)	1353
BfuI	GTATCC	1 cut(s)	1426
BglII	AGATCT	1 cut(s)	107
BisI	GCNGC	4 cut(s)	97, 730, 873, 1398
BlsI	GCNGC	4 cut(s)	98, 731, 874, 1399
BmcAI	AGTACT	1 cut(s)	1097
Bme1390I	CCNGG	1 cut(s)	2058
BmgBI	CACGTC	2 cut(s)	1661, 2014
BmgT120I	GGNCC	2 cut(s)	1056, 1221
BmiI	GGNNCC	7 cut(s)	603, 775, 1024, 1105, 1119, 1222, 1318
BmrFI	CCNGG	1 cut(s)	2058
BmsI	GCATC	6 cut(s)	802, 1174, 1332, 1576, 2089, 2114
BpiI	GAAGAC	4 cut(s)	438, 1491, 2016, 2068
Bpu14I	TTCGAA	1 cut(s)	1447
BpuEI	CTTGAG	1 cut(s)	1364
BsaBI	GATNNNNATC	1 cut(s)	1851
Bsc4I	CCNNNNNNNGG	2 cut(s)	1630, 2090
Bse1I	ACTGG	1 cut(s)	1976
Bse3DI	GCAATG	2 cut(s)	1272, 1554
Bse8I	GATNNNNATC	1 cut(s)	1851
BseBI	CCWGG	1 cut(s)	2058
BseGI	GGATG	3 cut(s)	1444, 1547, 2005
BseJI	GATNNNNATC	1 cut(s)	1851
BseLI	CCNNNNNNNGG	2 cut(s)	1630, 2090
BseMI	GCAATG	2 cut(s)	1272, 1554
BseMII	CTCAG	3 cut(s)	66, 186, 357
BseNI	ACTGG	1 cut(s)	1976
BseRI	GAGGAG	1 cut(s)	2148
BseSI	GKGCMC	2 cut(s)	1510, 1870
BseXI	GCAGC	4 cut(s)	108, 741, 884, 1409
Bsh1236I	CGCG	2 cut(s)	781, 817
BshFI	GGCC	3 cut(s)	1057, 1223, 1975
BsiHKAI	GWGCWC	2 cut(s)	1516, 1922
BslI	CCNNNNNNNGG	2 cut(s)	1630, 2090
BsmAI	GTCTC	3 cut(s)	181, 286, 1758
BsmI	GAATGC	1 cut(s)	385
BsnI	GGCC	3 cut(s)	1057, 1223, 1975
Bsp119I	TTCGAA	1 cut(s)	1447
Bsp1286I	GDGCHC	4 cut(s)	1510, 1516, 1870, 1922
Bsp1407I	TGTACA	2 cut(s)	1829, 2117
BspACI	CCGC	4 cut(s)	233, 1747, 1961, 2127
BspANI	GGCC	3 cut(s)	1057, 1223, 1975
BspCNI	CTCAG	3 cut(s)	65, 187, 358
BspFNI	CGCG	2 cut(s)	781, 817
BspLI	GGNNCC	7 cut(s)	603, 775, 1024, 1105, 1119, 1222, 1318
BspMI	ACCTGC	1 cut(s)	1353
BspPI	GGATC	5 cut(s)	596, 609, 901, 1369, 1626
BspT104I	TTCGAA	1 cut(s)	1447
BsrDI	GCAATG	2 cut(s)	1272, 1554
BsrGI	TGTACA	2 cut(s)	1829, 2117
BsrI	ACTGG	1 cut(s)	1976
BssSI	CACGAG	1 cut(s)	1509
Bst2BI	CACGAG	1 cut(s)	1509
Bst2UI	CCWGG	1 cut(s)	2058
Bst4CI	ACNGT	5 cut(s)	611, 1807, 1879, 2074, 2147
BstAPI	GCANNNNNTGC	1 cut(s)	1880
BstAUI	TGTACA	2 cut(s)	1829, 2117
BstBI	TTCGAA	1 cut(s)	1447
BstC8I	GCNNGC	5 cut(s)	527, 531, 727, 1321, 1672
BstDEI	CTNAG	5 cut(s)	52, 195, 366, 410, 1625
BstENI	CCTNNNNNAGG	1 cut(s)	1628
BstF5I	GGATG	3 cut(s)	1444, 1547, 2005
BstFNI	CGCG	2 cut(s)	781, 817
BstHHI	GCGC	4 cut(s)	426, 817, 948, 1719
BstMAI	GTCTC	3 cut(s)	181, 286, 1758
BstMWI	GCNNNNNNNGC	5 cut(s)	860, 869, 1022, 1880, 1972
BstNI	CCWGG	1 cut(s)	2058
BstNSI	RCATGY	4 cut(s)	320, 529, 1836, 1918
BstSCI	CCNGG	1 cut(s)	2056
BstSFI	CTRYAG	3 cut(s)	1068, 1885, 2088
BstSLI	GKGCMC	2 cut(s)	1510, 1870
BstUI	CGCG	2 cut(s)	781, 817
BstV1I	GCAGC	4 cut(s)	108, 741, 884, 1409
BstV2I	GAAGAC	4 cut(s)	438, 1491, 2016, 2068
BstX2I	RGATCY	3 cut(s)	107, 601, 1374
BstXI	CCANNNNNNTGG	2 cut(s)	1114, 1285
BstYI	RGATCY	3 cut(s)	107, 601, 1374
BsuI	GTATCC	1 cut(s)	1426
BsuRI	GGCC	3 cut(s)	1057, 1223, 1975
BtrI	CACGTC	2 cut(s)	1661, 2014
BtsCI	GGATG	3 cut(s)	1444, 1547, 2005
BtsIMutI	CAGTG	3 cut(s)	60, 1812, 1911
BveI	ACCTGC	1 cut(s)	1353
Cac8I	GCNNGC	5 cut(s)	527, 531, 727, 1321, 1672
CfoI	GCGC	4 cut(s)	426, 817, 948, 1719
Cfr13I	GGNCC	2 cut(s)	1056, 1221
Csp6I	GTAC	9 cut(s)	960, 1077, 1096, 1408, 1528, 1830, 2054, 2075, 2118
CspCI	CAANNNNNGTGG	2 cut(s)	1714, 1749
CviQI	GTAC	9 cut(s)	960, 1077, 1096, 1408, 1528, 1830, 2054, 2075, 2118
DdeI	CTNAG	5 cut(s)	52, 195, 366, 410, 1625
DraI	TTTAAA	1 cut(s)	556
EaeI	YGGCCR	1 cut(s)	1973
Ecl136II	GAGCTC	1 cut(s)	1514
Eco24I	GRGCYC	1 cut(s)	1516
Eco32I	GATATC	1 cut(s)	802
Eco53kI	GAGCTC	1 cut(s)	1514
Eco57I	CTGAAG	2 cut(s)	1323, 2028
EcoICRI	GAGCTC	1 cut(s)	1514
EcoNI	CCTNNNNNAGG	1 cut(s)	1628
EcoRI	GAATTC	1 cut(s)	2079
EcoRII	CCWGG	1 cut(s)	2056
EcoRV	GATATC	1 cut(s)	802
EcoT22I	ATGCAT	1 cut(s)	1774
EcoT38I	GRGCYC	1 cut(s)	1516
FalI	AAGNNNNNCTT	2 cut(s)	491, 523
FauI	CCCGC	2 cut(s)	240, 1740
FauNDI	CATATG	1 cut(s)	1743
FbaI	TGATCA	2 cut(s)	712, 1786
FblI	GTMKAC	2 cut(s)	142, 1170
Fnu4HI	GCNGC	4 cut(s)	97, 730, 873, 1398
FokI	GGATG	3 cut(s)	1451, 1534, 2012
FriOI	GRGCYC	1 cut(s)	1516
Fsp4HI	GCNGC	4 cut(s)	97, 730, 873, 1398
FspBI	CTAG	5 cut(s)	30, 573, 795, 878, 1590
FspI	TGCGCA	1 cut(s)	1718
GlaI	GCGC	4 cut(s)	425, 816, 947, 1718
GluI	GCNGC	4 cut(s)	97, 730, 873, 1398
HaeIII	GGCC	3 cut(s)	1057, 1223, 1975
HhaI	GCGC	4 cut(s)	426, 817, 948, 1719
Hin6I	GCGC	4 cut(s)	424, 815, 946, 1717
HinP1I	GCGC	4 cut(s)	424, 815, 946, 1717
HincII	GTYRAC	1 cut(s)	13
HindII	GTYRAC	1 cut(s)	13
HindIII	AAGCTT	2 cut(s)	852, 1577
HinfI	GANTC	9 cut(s)	70, 211, 337, 621, 905, 1046, 1138, 1172, 1562
HphI	GGTGA	3 cut(s)	284, 888, 1613
Hpy166II	GTNNAC	8 cut(s)	13, 143, 253, 457, 562, 1171, 1810, 2118
Hpy188I	TCNGA	5 cut(s)	210, 495, 1177, 1258, 1420
Hpy188III	TCNNGA	8 cut(s)	89, 105, 710, 1043, 1301, 1481, 1838, 1850
Hpy8I	GTNNAC	8 cut(s)	13, 143, 253, 457, 562, 1171, 1810, 2118
Hpy99I	CGWCG	1 cut(s)	1662
HpyAV	CCTTC	2 cut(s)	414, 764
HpyCH4III	ACNGT	5 cut(s)	611, 1807, 1879, 2074, 2147
HpyCH4IV	ACGT	3 cut(s)	1660, 2013, 2065
HpyF10VI	GCNNNNNNNGC	5 cut(s)	860, 869, 1022, 1880, 1972
HpyF3I	CTNAG	5 cut(s)	52, 195, 366, 410, 1625
HpySE526I	ACGT	3 cut(s)	1660, 2013, 2065
HspAI	GCGC	4 cut(s)	424, 815, 946, 1717
Ksp22I	TGATCA	2 cut(s)	712, 1786
LmnI	GCTCC	7 cut(s)	737, 1022, 1123, 1316, 1679, 1925, 1963
Lsp1109I	GCAGC	4 cut(s)	108, 741, 884, 1409
LweI	GCATC	6 cut(s)	802, 1174, 1332, 1576, 2089, 2114
MaeI	CTAG	5 cut(s)	30, 573, 795, 878, 1590
MaeII	ACGT	3 cut(s)	1660, 2013, 2065
MaeIII	GTNAC	2 cut(s)	25, 41
MfeI	CAATTG	4 cut(s)	216, 322, 1017, 1758
MflI	RGATCY	3 cut(s)	107, 601, 1374
MhlI	GDGCHC	4 cut(s)	1510, 1516, 1870, 1922
MlsI	TGGCCA	1 cut(s)	1975
MluNI	TGGCCA	1 cut(s)	1975
MlyI	GAGTC	4 cut(s)	220, 346, 615, 1166
MmeI	TCCRAC	5 cut(s)	243, 675, 847, 947, 1575
Mox20I	TGGCCA	1 cut(s)	1975
Mph1103I	ATGCAT	1 cut(s)	1774
MscI	TGGCCA	1 cut(s)	1975
MseI	TTAA	8 cut(s)	555, 834, 1581, 1680, 1691, 1814, 2175, 2188
MslI	CAYNNNNRTG	3 cut(s)	1112, 1195, 2145
Msp20I	TGGCCA	1 cut(s)	1975
MspR9I	CCNGG	1 cut(s)	2058
MunI	CAATTG	4 cut(s)	216, 322, 1017, 1758
Mva1269I	GAATGC	1 cut(s)	385
MvaI	CCWGG	1 cut(s)	2058
MvnI	CGCG	2 cut(s)	781, 817
MwoI	GCNNNNNNNGC	5 cut(s)	860, 869, 1022, 1880, 1972
NdeI	CATATG	1 cut(s)	1743
NlaIV	GGNNCC	7 cut(s)	603, 775, 1024, 1105, 1119, 1222, 1318
NmuCI	GTSAC	1 cut(s)	41
NsbI	TGCGCA	1 cut(s)	1718
NsiI	ATGCAT	1 cut(s)	1774
NspI	RCATGY	4 cut(s)	320, 529, 1836, 1918
NspV	TTCGAA	1 cut(s)	1447
PaeI	GCATGC	1 cut(s)	529
PciI	ACATGT	1 cut(s)	1832
PctI	GAATGC	1 cut(s)	385
PfeI	GAWTC	5 cut(s)	70, 905, 1046, 1138, 1562
PflFI	GACNNNGTC	1 cut(s)	647
PkrI	GCNGC	4 cut(s)	98, 731, 874, 1399
PleI	GAGTC	4 cut(s)	219, 345, 615, 1166
PpsI	GAGTC	4 cut(s)	219, 345, 615, 1166
PscI	ACATGT	1 cut(s)	1832
PshBI	ATTAAT	1 cut(s)	2175
Psp124BI	GAGCTC	1 cut(s)	1516
Psp6I	CCWGG	1 cut(s)	2056
PspGI	CCWGG	1 cut(s)	2056
PspN4I	GGNNCC	7 cut(s)	603, 775, 1024, 1105, 1119, 1222, 1318
PspPI	GGNCC	2 cut(s)	1056, 1221
PsuI	RGATCY	3 cut(s)	107, 601, 1374
PsyI	GACNNNGTC	1 cut(s)	647
RsaI	GTAC	9 cut(s)	961, 1078, 1097, 1409, 1529, 1831, 2055, 2076, 2119
RsaNI	GTAC	9 cut(s)	960, 1077, 1096, 1408, 1528, 1830, 2054, 2075, 2118
RseI	CAYNNNNRTG	3 cut(s)	1112, 1195, 2145
SacI	GAGCTC	1 cut(s)	1516
SaqAI	TTAA	8 cut(s)	555, 834, 1581, 1680, 1691, 1814, 2175, 2188
SatI	GCNGC	4 cut(s)	97, 730, 873, 1398
Sau96I	GGNCC	2 cut(s)	1056, 1221
ScaI	AGTACT	1 cut(s)	1097
SchI	GAGTC	4 cut(s)	220, 346, 615, 1166
ScrFI	CCNGG	1 cut(s)	2058
SduI	GDGCHC	4 cut(s)	1510, 1516, 1870, 1922
SfaNI	GCATC	6 cut(s)	802, 1174, 1332, 1576, 2089, 2114
SfcI	CTRYAG	3 cut(s)	1068, 1885, 2088
SfuI	TTCGAA	1 cut(s)	1447
SmiMI	CAYNNNNRTG	3 cut(s)	1112, 1195, 2145
SmlI	CTYRAG	1 cut(s)	1379
SmoI	CTYRAG	1 cut(s)	1379
SpeI	ACTAGT	1 cut(s)	29
SphI	GCATGC	1 cut(s)	529
SsiI	CCGC	4 cut(s)	233, 1747, 1961, 2127
SspMI	CTAG	5 cut(s)	30, 573, 795, 878, 1590
SstI	GAGCTC	1 cut(s)	1516
StyD4I	CCNGG	1 cut(s)	2056
TaaI	ACNGT	5 cut(s)	611, 1807, 1879, 2074, 2147
TaiI	ACGT	3 cut(s)	1663, 2016, 2068
TaqI	TCGA	5 cut(s)	1261, 1447, 1574, 1837, 1855
TatI	WGTACW	3 cut(s)	1095, 1829, 2117
TfiI	GAWTC	5 cut(s)	70, 905, 1046, 1138, 1562
Tru1I	TTAA	8 cut(s)	555, 834, 1581, 1680, 1691, 1814, 2175, 2188
Tru9I	TTAA	8 cut(s)	555, 834, 1581, 1680, 1691, 1814, 2175, 2188
TscAI	CASTG	3 cut(s)	60, 1812, 1911
TseFI	GTSAC	1 cut(s)	41
TseI	GCWGC	4 cut(s)	96, 729, 872, 1397
Tsp45I	GTSAC	1 cut(s)	41
TspGWI	ACGGA	1 cut(s)	614
TspRI	CASTG	3 cut(s)	60, 1812, 1911
Tth111I	GACNNNGTC	1 cut(s)	647
VspI	ATTAAT	1 cut(s)	2175
XagI	CCTNNNNNAGG	1 cut(s)	1628
XapI	RAATTY	1 cut(s)	2079
XceI	RCATGY	4 cut(s)	320, 529, 1836, 1918
XcmI	CCANNNNNNNNNTGG	1 cut(s)	321
XmiI	GTMKAC	2 cut(s)	142, 1170
XspI	CTAG	5 cut(s)	30, 573, 795, 878, 1590
ZrmI	AGTACT	1 cut(s)	1097
Zsp2I	ATGCAT	1 cut(s)	1774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.