Rroxscaffold_161G00448090

AtPRD1,PRD1

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000161
Physical Location & Seq
Reverse (-)
63302 .. 66661
3360 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_161G00448090.1

Sequence Viewer

Length: 2271 bp
ATGGAAGAGGAAACTATCCTTGGAGTACTGGAAACTTTTCATTCGATACTGCTTCAGGATTCTGATAACCAAGCCAGAGAATTTGCAATGACGCTACTTTCGAGCACTTGGTTCACGTTGTCATTTGGATGTCTAGGCTTATTCCCTGCTGAGAAGATGAAGTGGAGGGTGTATCTGATGCTCAGTTCACTGGTGGATGTGCTTTTGGGAACTGATACTGGGCAACCCATTAGGGATGCTACTACATATCTGCCATCTGATCCCATTGATTTGCTTTTTCTACTTGGTCAAAGGAACACCCATAAGTTGGAATTATCTTCTTGTCAATCTGCCATTTTGCTGATCTTATACATCAGTTCTTTACATGATGAAAGACTTGCAGATGATAAGATGGTTTTAGCCTCTCTGGAGCAATATATTTTGGTCAACAGTAGTGATCTCCAAAGTGGAGCCACTGATTCGTTCACAGTGATGATGCTGTTGTTTCTTTACGGCCTTTATAGGGGTCTTGCCGAGGTTAGCTACCAAATCCCCTATAGTCCAGAAGCTGAAAGAATCCTGTTTCAGATAGTAACTGAAAATGAATGGGATTTGTCTTCTGCAAGAATTCATCCAATATCATTGAAATGGTTCTTTCAACAAGAGAAATTGAGAAACTCATTATCTTATCAGCTTCTGAAATTTTGCAGAAGGAATACATCAAATGGCTCTGAAAGCACTGCCCATGGAAAGAATAGTCATATATTAAATGTTAATGCAATTGCAGAGTTAATAGTAGAAGAACATAGTTATGGCGCCACAATTTTGGTGTGCTTATTGACAGAGCTTGTTCAAACAGAAGGTCAAGAGCAAGAGATAATTTCTGTAGTCAATCTCATGGCAACAATTGTCGACATATATCCAACCATTTCAGACCAGTTATGCTTTCTTGGTATTGGAAATGCAGCTCGTACTCTTTATTGTGAGTCCTCCTATACACAGTCCCCACAGATATCCGCAGTTGTGTTGGTTCTTATTTTTAAAATTCTATGCTCGGTGCAACATGATACTCTTTCTGATGATGAAAGTTGGCTTGCAGTGATTGTGAAGTTGATAAACAGTATCACCACAAAAGCTGCAGACATGTGGAATCATGAATGTCTCTTGGTGATTGGCATACTTTGCTTGATTTTGCACCATTCTGCTAATGCAGTGCTCACAGAAGCTTCAAAAACCATCATTTTCAGTAGTTCTCTAGTCTCTACAATCAACAGTGCAGTTCATGCAGCATGTCTTAAGGGGCCAGCATTGGTTGACCATGATGAAGGAACAAGCTCTGGAGAAATTTTGATATTTATGCTTCTTCTAAATTACTTCACTTTAAGAAGTTTGCACATTGTTGTACCAGGGATTATGGACTGGAAAGTTTTCTTAGATCCCTCAGGTAGGATGCAGTCATTTTCCTTTATTGGCATCTACTGCCATGACCTGTGCAGGCTAATGCATTTTGGATCTCCTGTGGTCAAGCTTGCTGCTTCATACTGCCTGTTGGAGTTGTTCACCAGAATATCTGAGCAGAGGAATAGAACAGGGGAGGAGTTGCTATGTGCCACGAAGTACCTAAGTTCTGTAATGGCTGTATTAGAAGGCTTAGTTTTCTACAGTGACCTCAGAGTGGCTATGAATTGTGGCCTGTGCCTGTCAATGATCATGGGGTGGGAATTGCCGGACATGCATGAGACAAGTGTGGATGCAAAGAATACTTGGAGTAGGATGGTTGTGGAAGAGCTCGCAATGTCTTTAGCTGTCCCGTGCCTGGCATCAAAATCTTTCATTAATCTTCACAAGCCTGCAATTCATGTTGCAGTTGCTCTGTTAAAACTGCAGAAGATTCCTAAGTGGATGAGATCCGTATTTGATGATACTTGCATATCTAGCATAATTCAAAACCTTGCGGCTAATAATTTGAGCACAGAAATTGTTGTATTATTTCGAGCTCTATTGAATTCAGAGTTCTTAAAGATGGAACAAATTGCTAGCTTAAATCAGTTGCTCCAGGTGTGCAGAAAACAAAAGTACACTGACAACACCAAGGATGATGGTGCGCAAGAGCATAGAGTGGTGATCAGCAACCTGGATGATTTGGGACAAGTTTGTGAGTATCTCATTCGTTTGATGTCATCAGAGTCATCTTTAGATAAGGATTCTGGAGGATCACATCTTGGGAATAAGAGATTGTTAGAAGAAATAGAGCTTTTCTTTAGAACTTTGACGGTACAGGATGAAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

756

Amino Acids

84.66

Weight (kDa)

5.11

Isoelectric Point (pI)

43.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2085
AccB1I GGYRCC 1 cut(s) 794
AccB7I CCANNNNNTGG 1 cut(s) 307
AccI GTMKAC 1 cut(s) 891
AciI CCGC 2 cut(s) 996, 1934
AclWI GGATC 5 cut(s) 254, 1409, 1498, 1881, 2200
AcsI RAATTY 6 cut(s) 80, 606, 680, 1023, 1323, 1984
AcuI CTGAAG 1 cut(s) 38
AcyI GRCGYC 1 cut(s) 795
AfaI GTAC 6 cut(s) 27, 952, 1383, 1598, 2057, 2256
AfiI CCNNNNNNNGG 5 cut(s) 307, 502, 1425, 1654, 1795
AflII CTTAAG 1 cut(s) 1274
AflIII ACRYGT 1 cut(s) 1122
AgsI TTSAA 6 cut(s) 625, 638, 833, 1209, 1925, 1984
AjnI CCWGG 4 cut(s) 1384, 1794, 2034, 2112
AjuI GAANNNNNNNTTGG 1 cut(s) 35
Alw21I GWGCWC 5 cut(s) 107, 1197, 1770, 1952, 1978
Alw26I GTCTC 3 cut(s) 1145, 1243, 1712
AlwI GGATC 5 cut(s) 254, 1409, 1498, 1881, 2200
AlwNI CAGNNNCTG 2 cut(s) 548, 676
AoxI GGCC 3 cut(s) 493, 1280, 1669
ApeKI GCWGC 4 cut(s) 944, 1115, 1265, 1511
ApoI RAATTY 6 cut(s) 80, 606, 680, 1023, 1323, 1984
ArsI GACNNNNNNTTYG 4 cut(s) 82, 114, 826, 858
AseI ATTAAT 1 cut(s) 1815
Asp700I GAANNNNTTC 3 cut(s) 36, 629, 1406
AspLEI GCGC 2 cut(s) 797, 2086
AspS9I GGNCC 1 cut(s) 1280
AsuHPI GGTGA 4 cut(s) 1096, 1159, 1531, 2113
AsuNHI GCTAGC 1 cut(s) 2015
AxyI CCTNAGG 1 cut(s) 1420
BanI GGYRCC 1 cut(s) 794
BanII GRGCYC 2 cut(s) 1770, 1978
BbsI GAAGAC 1 cut(s) 588
Bbv12I GWGCWC 5 cut(s) 107, 1197, 1770, 1952, 1978
BbvI GCAGC 4 cut(s) 956, 1102, 1277, 1498
BccI CCATC 6 cut(s) 262, 385, 1223, 1747, 1996, 2072
BceAI ACGGC 1 cut(s) 508
BciT130I CCWGG 4 cut(s) 1386, 1796, 2036, 2114
BclI TGATCA 2 cut(s) 1686, 2103
BcoDI GTCTC 3 cut(s) 1145, 1243, 1712
BfaI CTAG 4 cut(s) 134, 1235, 1914, 2016
BfmI CTRYAG 5 cut(s) 535, 864, 1116, 1639, 1862
BfoI RGCGCY 1 cut(s) 798
BfrI CTTAAG 1 cut(s) 1274
BisI GCNGC 5 cut(s) 945, 1116, 1266, 1512, 1935
BlsI GCNGC 5 cut(s) 946, 1117, 1267, 1513, 1936
BmcAI AGTACT 1 cut(s) 27
Bme1390I CCNGG 4 cut(s) 1386, 1796, 2036, 2114
BmgT120I GGNCC 1 cut(s) 1280
BmiI GGNNCC 3 cut(s) 451, 796, 1281
BmrFI CCNGG 4 cut(s) 1386, 1796, 2036, 2114
BmrI ACTGGG 1 cut(s) 228
BmsI GCATC 7 cut(s) 168, 226, 465, 1419, 1461, 1720, 1808
BmtI GCTAGC 1 cut(s) 2019
BmuI ACTGGG 1 cut(s) 228
BpiI GAAGAC 1 cut(s) 588
BpmI CTGGAG 4 cut(s) 428, 1338, 2018, 2208
BsaHI GRCGYC 1 cut(s) 795
BsaJI CCNNGG 5 cut(s) 19, 513, 724, 1385, 2070
Bsc4I CCNNNNNNNGG 5 cut(s) 307, 502, 1425, 1654, 1795
Bse1I ACTGG 5 cut(s) 33, 195, 223, 916, 1403
Bse21I CCTNAGG 1 cut(s) 1420
Bse3DI GCAATG 2 cut(s) 93, 1779
BseBI CCWGG 4 cut(s) 1386, 1796, 2036, 2114
BseDI CCNNGG 5 cut(s) 19, 513, 724, 1385, 2070
BseLI CCNNNNNNNGG 5 cut(s) 307, 502, 1425, 1654, 1795
BseMI GCAATG 2 cut(s) 93, 1779
BseMII CTCAG 5 cut(s) 141, 196, 1434, 1542, 1663
BseNI ACTGG 5 cut(s) 33, 195, 223, 916, 1403
BseRI GAGGAG 1 cut(s) 1589
BseXI GCAGC 4 cut(s) 956, 1102, 1277, 1498
BsgI GTGCAG 3 cut(s) 1275, 1492, 2062
BshFI GGCC 3 cut(s) 495, 1282, 1671
BshNI GGYRCC 1 cut(s) 794
BsiHKAI GWGCWC 5 cut(s) 107, 1197, 1770, 1952, 1978
BsiSI CCGG 1 cut(s) 1706
BslFI GGGAC 3 cut(s) 967, 1772, 2139
BslI CCNNNNNNNGG 5 cut(s) 307, 502, 1425, 1654, 1795
BsmAI GTCTC 3 cut(s) 1145, 1243, 1712
BsmFI GGGAC 3 cut(s) 967, 1772, 2139
BsnI GGCC 3 cut(s) 495, 1282, 1671
Bsp1286I GDGCHC 5 cut(s) 107, 1197, 1770, 1952, 1978
Bsp143I GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
Bsp19I CCATGG 1 cut(s) 724
BspACI CCGC 2 cut(s) 996, 1934
BspANI GGCC 3 cut(s) 495, 1282, 1671
BspCNI CTCAG 5 cut(s) 142, 195, 1433, 1543, 1662
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 3 cut(s) 451, 796, 1281
BspMAI CTGCAG 2 cut(s) 1120, 1866
BspOI GCTAGC 1 cut(s) 2019
BspPI GGATC 5 cut(s) 254, 1409, 1498, 1881, 2200
BspQI GCTCTTC 1 cut(s) 1758
BspT107I GGYRCC 1 cut(s) 794
BspTI CTTAAG 1 cut(s) 1274
BsrDI GCAATG 2 cut(s) 93, 1779
BsrI ACTGG 5 cut(s) 33, 195, 223, 916, 1403
BssECI CCNNGG 5 cut(s) 19, 513, 724, 1385, 2070
BssMI GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
BssNI GRCGYC 1 cut(s) 795
BssT1I CCWWGG 3 cut(s) 19, 724, 2070
Bst2UI CCWGG 4 cut(s) 1386, 1796, 2036, 2114
Bst4CI ACNGT 7 cut(s) 431, 469, 981, 1100, 1253, 1643, 2254
Bst6I CTCTTC 1 cut(s) 1758
BstACI GRCGYC 1 cut(s) 795
BstAFI CTTAAG 1 cut(s) 1274
BstAPI GCANNNNNTGC 3 cut(s) 1161, 1262, 1458
BstC8I GCNNGC 7 cut(s) 1074, 1284, 1475, 1509, 1770, 1830, 2017
BstDEI CTNAG 9 cut(s) 150, 182, 1411, 1420, 1551, 1601, 1630, 1649, 1875
BstDSI CCRYGG 1 cut(s) 724
BstENI CCTNNNNNAGG 1 cut(s) 1423
BstH2I RGCGCY 1 cut(s) 798
BstHHI GCGC 2 cut(s) 797, 2086
BstKTI GATC 9 cut(s) 262, 345, 439, 1417, 1493, 1689, 1889, 2106, 2195
BstMAI GTCTC 3 cut(s) 1145, 1243, 1712
BstMBI GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
BstMWI GCNNNNNNNGC 6 cut(s) 714, 1161, 1262, 1458, 1711, 1914
BstNI CCWGG 4 cut(s) 1386, 1796, 2036, 2114
BstNSI RCATGY 3 cut(s) 1126, 1272, 1714
BstSCI CCNGG 4 cut(s) 1384, 1794, 2034, 2112
BstSFI CTRYAG 5 cut(s) 535, 864, 1116, 1639, 1862
BstV1I GCAGC 4 cut(s) 956, 1102, 1277, 1498
BstV2I GAAGAC 1 cut(s) 588
BstX2I RGATCY 3 cut(s) 1414, 1490, 1886
BstXI CCANNNNNNTGG 1 cut(s) 805
BstYI RGATCY 3 cut(s) 1414, 1490, 1886
Bsu36I CCTNAGG 1 cut(s) 1420
BsuRI GGCC 3 cut(s) 495, 1282, 1671
BtgI CCRYGG 1 cut(s) 724
BtsI GCAGTG 3 cut(s) 717, 1083, 1197
BtsIMutI CAGTG 9 cut(s) 188, 453, 474, 717, 1083, 1197, 1258, 1648, 2058
Cac8I GCNNGC 7 cut(s) 1074, 1284, 1475, 1509, 1770, 1830, 2017
CaiI CAGNNNCTG 2 cut(s) 548, 676
CciI TCATGA 1 cut(s) 1132
CfoI GCGC 2 cut(s) 797, 2086
Cfr13I GGNCC 1 cut(s) 1280
CseI GACGC 1 cut(s) 100
Csp6I GTAC 6 cut(s) 26, 951, 1382, 1597, 2056, 2255
CviQI GTAC 6 cut(s) 26, 951, 1382, 1597, 2056, 2255
DdeI CTNAG 9 cut(s) 150, 182, 1411, 1420, 1551, 1601, 1630, 1649, 1875
DinI GGCGCC 1 cut(s) 796
DpnI GATC 9 cut(s) 261, 344, 438, 1416, 1492, 1688, 1888, 2105, 2194
DpnII GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
DraI TTTAAA 1 cut(s) 1021
Eam1104I CTCTTC 1 cut(s) 1758
EarI CTCTTC 1 cut(s) 1758
Ecl136II GAGCTC 2 cut(s) 1768, 1976
Eco130I CCWWGG 3 cut(s) 19, 724, 2070
Eco24I GRGCYC 2 cut(s) 1770, 1978
Eco32I GATATC 1 cut(s) 993
Eco53kI GAGCTC 2 cut(s) 1768, 1976
Eco57I CTGAAG 1 cut(s) 38
Eco81I CCTNAGG 1 cut(s) 1420
EcoICRI GAGCTC 2 cut(s) 1768, 1976
EcoNI CCTNNNNNAGG 1 cut(s) 1423
EcoRI GAATTC 2 cut(s) 606, 1984
EcoRII CCWGG 4 cut(s) 1384, 1794, 2034, 2112
EcoRV GATATC 1 cut(s) 993
EcoT14I CCWWGG 3 cut(s) 19, 724, 2070
EcoT22I ATGCAT 2 cut(s) 1485, 1716
EcoT38I GRGCYC 2 cut(s) 1770, 1978
EgeI GGCGCC 1 cut(s) 796
EheI GGCGCC 1 cut(s) 796
ErhI CCWWGG 3 cut(s) 19, 724, 2070
FaqI GGGAC 3 cut(s) 967, 1772, 2139
FbaI TGATCA 2 cut(s) 1686, 2103
FblI GTMKAC 1 cut(s) 891
Fnu4HI GCNGC 5 cut(s) 945, 1116, 1266, 1512, 1935
FriOI GRGCYC 2 cut(s) 1770, 1978
Fsp4HI GCNGC 5 cut(s) 945, 1116, 1266, 1512, 1935
FspBI CTAG 4 cut(s) 134, 1235, 1914, 2016
FspI TGCGCA 1 cut(s) 2085
GlaI GCGC 2 cut(s) 796, 2085
GluI GCNGC 5 cut(s) 945, 1116, 1266, 1512, 1935
GsuI CTGGAG 4 cut(s) 428, 1338, 2018, 2208
HaeII RGCGCY 1 cut(s) 798
HaeIII GGCC 3 cut(s) 495, 1282, 1671
HapII CCGG 1 cut(s) 1706
HgaI GACGC 1 cut(s) 100
HhaI GCGC 2 cut(s) 797, 2086
Hin1I GRCGYC 1 cut(s) 795
Hin6I GCGC 2 cut(s) 795, 2084
HinP1I GCGC 2 cut(s) 795, 2084
HincII GTYRAC 3 cut(s) 427, 892, 1294
HindII GTYRAC 3 cut(s) 427, 892, 1294
HindIII AAGCTT 2 cut(s) 1203, 1505
HinfI GANTC 8 cut(s) 59, 458, 555, 965, 1129, 1870, 2165, 2183
HpaII CCGG 1 cut(s) 1706
HphI GGTGA 4 cut(s) 1096, 1159, 1531, 2113
Hpy166II GTNNAC 8 cut(s) 114, 188, 427, 465, 892, 1294, 1539, 2058
Hpy188III TCNNGA 7 cut(s) 56, 407, 542, 845, 1133, 1317, 2187
Hpy8I GTNNAC 8 cut(s) 114, 188, 427, 465, 892, 1294, 1539, 2058
HpyAV CCTTC 4 cut(s) 684, 833, 1298, 1619
HpyCH4III ACNGT 7 cut(s) 431, 469, 981, 1100, 1253, 1643, 2254
HpyCH4IV ACGT 1 cut(s) 116
HpyF10VI GCNNNNNNNGC 6 cut(s) 714, 1161, 1262, 1458, 1711, 1914
HpyF3I CTNAG 9 cut(s) 150, 182, 1411, 1420, 1551, 1601, 1630, 1649, 1875
HpySE526I ACGT 1 cut(s) 116
Hsp92I GRCGYC 1 cut(s) 795
HspAI GCGC 2 cut(s) 795, 2084
KasI GGCGCC 1 cut(s) 794
Ksp22I TGATCA 2 cut(s) 1686, 2103
Kzo9I GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
LguI GCTCTTC 1 cut(s) 1758
LmnI GCTCC 3 cut(s) 409, 449, 2037
Lsp1109I GCAGC 4 cut(s) 956, 1102, 1277, 1498
LweI GCATC 7 cut(s) 168, 226, 465, 1419, 1461, 1720, 1808
MaeI CTAG 4 cut(s) 134, 1235, 1914, 2016
MaeII ACGT 1 cut(s) 116
MaeIII GTNAC 2 cut(s) 571, 1643
MalI GATC 9 cut(s) 261, 344, 438, 1416, 1492, 1688, 1888, 2105, 2194
MboI GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
MfeI CAATTG 2 cut(s) 759, 885
MflI RGATCY 3 cut(s) 1414, 1490, 1886
MhlI GDGCHC 5 cut(s) 107, 1197, 1770, 1952, 1978
Mly113I GGCGCC 1 cut(s) 795
MlyI GAGTC 2 cut(s) 974, 2174
MmeI TCCRAC 3 cut(s) 288, 926, 1509
MnlI CCTC 9 cut(s) 159, 412, 508, 979, 1429, 1551, 1567, 1658, 2183
Mph1103I ATGCAT 2 cut(s) 1485, 1716
MroXI GAANNNNTTC 3 cut(s) 36, 629, 1406
MslI CAYNNNNRTG 4 cut(s) 127, 470, 625, 789
MspCI CTTAAG 1 cut(s) 1274
MspI CCGG 1 cut(s) 1706
MspR9I CCNGG 4 cut(s) 1386, 1796, 2036, 2114
MunI CAATTG 2 cut(s) 759, 885
MvaI CCWGG 4 cut(s) 1386, 1796, 2036, 2114
MwoI GCNNNNNNNGC 6 cut(s) 714, 1161, 1262, 1458, 1711, 1914
NarI GGCGCC 1 cut(s) 795
NcoI CCATGG 1 cut(s) 724
NdeII GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
NheI GCTAGC 1 cut(s) 2015
NlaIV GGNNCC 3 cut(s) 451, 796, 1281
NmeAIII GCCGAG 1 cut(s) 538
NmuCI GTSAC 1 cut(s) 1643
NsbI TGCGCA 1 cut(s) 2085
NsiI ATGCAT 2 cut(s) 1485, 1716
NspI RCATGY 3 cut(s) 1126, 1272, 1714
PagI TCATGA 1 cut(s) 1132
PciI ACATGT 1 cut(s) 1122
PciSI GCTCTTC 1 cut(s) 1758
PcsI WCGNNNNNNNCGW 1 cut(s) 98
PdmI GAANNNNTTC 3 cut(s) 36, 629, 1406
PfeI GAWTC 6 cut(s) 59, 458, 555, 1129, 1870, 2183
PflMI CCANNNNNTGG 1 cut(s) 307
PkrI GCNGC 5 cut(s) 946, 1117, 1267, 1513, 1936
PleI GAGTC 2 cut(s) 973, 2173
PluTI GGCGCC 1 cut(s) 798
PpsI GAGTC 2 cut(s) 973, 2173
PscI ACATGT 1 cut(s) 1122
PshBI ATTAAT 1 cut(s) 1815
Psp124BI GAGCTC 2 cut(s) 1770, 1978
Psp6I CCWGG 4 cut(s) 1384, 1794, 2034, 2112
PspGI CCWGG 4 cut(s) 1384, 1794, 2034, 2112
PspN4I GGNNCC 3 cut(s) 451, 796, 1281
PspPI GGNCC 1 cut(s) 1280
PstI CTGCAG 2 cut(s) 1120, 1866
PstNI CAGNNNCTG 2 cut(s) 548, 676
PsuI RGATCY 3 cut(s) 1414, 1490, 1886
RsaI GTAC 6 cut(s) 27, 952, 1383, 1598, 2057, 2256
RsaNI GTAC 6 cut(s) 26, 951, 1382, 1597, 2056, 2255
RseI CAYNNNNRTG 4 cut(s) 127, 470, 625, 789
SacI GAGCTC 2 cut(s) 1770, 1978
SalI GTCGAC 1 cut(s) 890
SapI GCTCTTC 1 cut(s) 1758
SatI GCNGC 5 cut(s) 945, 1116, 1266, 1512, 1935
Sau3AI GATC 9 cut(s) 259, 342, 436, 1414, 1490, 1686, 1886, 2103, 2192
Sau96I GGNCC 1 cut(s) 1280
ScaI AGTACT 1 cut(s) 27
SchI GAGTC 2 cut(s) 974, 2174
ScrFI CCNGG 4 cut(s) 1386, 1796, 2036, 2114
SduI GDGCHC 5 cut(s) 107, 1197, 1770, 1952, 1978
SfaNI GCATC 7 cut(s) 168, 226, 465, 1419, 1461, 1720, 1808
SfcI CTRYAG 5 cut(s) 535, 864, 1116, 1639, 1862
SfoI GGCGCC 1 cut(s) 796
SmiMI CAYNNNNRTG 4 cut(s) 127, 470, 625, 789
SmlI CTYRAG 1 cut(s) 1274
SmoI CTYRAG 1 cut(s) 1274
SsiI CCGC 2 cut(s) 996, 1934
SspDI GGCGCC 1 cut(s) 794
SspMI CTAG 4 cut(s) 134, 1235, 1914, 2016
SstI GAGCTC 2 cut(s) 1770, 1978
StyD4I CCNGG 4 cut(s) 1384, 1794, 2034, 2112
StyI CCWWGG 3 cut(s) 19, 724, 2070
TaaI ACNGT 7 cut(s) 431, 469, 981, 1100, 1253, 1643, 2254
TaiI ACGT 1 cut(s) 119
TaqI TCGA 4 cut(s) 44, 101, 891, 1972
TatI WGTACW 2 cut(s) 25, 2055
TauI GCSGC 1 cut(s) 1937
TfiI GAWTC 6 cut(s) 59, 458, 555, 1129, 1870, 2183
TscAI CASTG 9 cut(s) 195, 460, 474, 724, 1083, 1197, 1258, 1648, 2065
TseFI GTSAC 1 cut(s) 1643
TseI GCWGC 4 cut(s) 944, 1115, 1265, 1511
Tsp45I GTSAC 1 cut(s) 1643
TspGWI ACGGA 1 cut(s) 1879
TspRI CASTG 9 cut(s) 195, 460, 474, 724, 1083, 1197, 1258, 1648, 2065
Van91I CCANNNNNTGG 1 cut(s) 307
Vha464I CTTAAG 1 cut(s) 1274
VspI ATTAAT 1 cut(s) 1815
XagI CCTNNNNNAGG 1 cut(s) 1423
XapI RAATTY 6 cut(s) 80, 606, 680, 1023, 1323, 1984
XceI RCATGY 3 cut(s) 1126, 1272, 1714
XmiI GTMKAC 1 cut(s) 891
XmnI GAANNNNTTC 3 cut(s) 36, 629, 1406
XspI CTAG 4 cut(s) 134, 1235, 1914, 2016
ZrmI AGTACT 1 cut(s) 27
Zsp2I ATGCAT 2 cut(s) 1485, 1716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.