AtPRD1,PRD1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14180 AT4G14180 |
| fragaria_vesca | FvH4_4g12860 |
| malus_domestica | MD04G1022200.v1.1 |
| prunus_persica | Prupe.1G172400_v2.0.a1 Prupe.1G176200_v2.0.a1 |
| pyrus_communis | pycom04g01870 |
| rosa_chinensis | RchiOBHm_Chr4g0412451 RchiOBHm_Chr4g0412511 |
| rosa_laevigata | RLG00000008284 RLG00000008287 RLG00000008289 RLG00000008295 RLG00000008298 |
| rosa_multiflora | Rmu_sc0002604.1_g000020 Rmu_sc0003914.1_g000006 Rmu_sc0005615.1_g000012 |
| rosa_roxburghii | Rroxscaffold_161G00448090 Rroxscaffold_2G00117420 Rroxscaffold_4G00325160 Rroxscaffold_5G00356600 Rroxscaffold_5G00356610 Rroxscaffold_5G00356660 Rroxscaffold_5G00356680 Rroxscaffold_5G00356720 Rroxscaffold_7G00197050 |
| rosa_rugosa | Rorug04G0103300 Rorug04G0103400 Rorug04G0103700.1 |
| rosa_samantha | Rh4AG173200 Rh4AG173600 Rh4BG173100 Rh4CG184000 Rh4CG184500 Rh4DG167600 Rh4DG168300 Rh4DG168400 Rh4DG168900 |
| rosa_wichuraiana | Rw4G014490 Rw4G014550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 548 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 119 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1237 |
| AciI | CCGC | 2 cut(s) | 1310, 1973 |
| AclWI | GGATC | 5 cut(s) | 251, 264, 1184, 1451, 1537 |
| AcsI | RAATTY | 3 cut(s) | 742, 775, 1010 |
| AcuI | CTGAAG | 5 cut(s) | 33, 263, 396, 431, 968 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1237, 1693, 1834 |
| AflIII | ACRYGT | 1 cut(s) | 723 |
| AhlI | ACTAGT | 2 cut(s) | 196, 475 |
| AjnI | CCWGG | 6 cut(s) | 442, 679, 1426, 1459, 1833, 2073 |
| Alw21I | GWGCWC | 2 cut(s) | 1991, 2017 |
| Alw26I | GTCTC | 2 cut(s) | 533, 1751 |
| AlwI | GGATC | 5 cut(s) | 251, 264, 1184, 1451, 1537 |
| AoxI | GGCC | 3 cut(s) | 84, 94, 1708 |
| ApeKI | GCWGC | 1 cut(s) | 1550 |
| ApoI | RAATTY | 3 cut(s) | 742, 775, 1010 |
| AseI | ATTAAT | 1 cut(s) | 1854 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 477, 966, 1448 |
| AspS9I | GGNCC | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 1 cut(s) | 2089 |
| AsuNHI | GCTAGC | 1 cut(s) | 2054 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1901, 1934 |
| BamHI | GGATCC | 1 cut(s) | 256 |
| BanII | GRGCYC | 1 cut(s) | 2017 |
| Bbv12I | GWGCWC | 2 cut(s) | 1991, 2017 |
| BbvI | GCAGC | 1 cut(s) | 1537 |
| BciT130I | CCWGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| BclI | TGATCA | 1 cut(s) | 1725 |
| BcoDI | GTCTC | 2 cut(s) | 533, 1751 |
| BcuI | ACTAGT | 2 cut(s) | 196, 475 |
| BfaI | CTAG | 8 cut(s) | 137, 197, 476, 611, 1064, 1307, 1953, 2055 |
| BfmI | CTRYAG | 2 cut(s) | 1678, 1901 |
| BglII | AGATCT | 1 cut(s) | 1925 |
| BisI | GCNGC | 2 cut(s) | 1551, 1974 |
| BlpI | GCTNAGC | 1 cut(s) | 306 |
| BlsI | GCNGC | 2 cut(s) | 1552, 1975 |
| BmcAI | AGTACT | 4 cut(s) | 195, 360, 864, 957 |
| Bme1390I | CCNGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| BmgT120I | GGNCC | 1 cut(s) | 95 |
| BmiI | GGNNCC | 3 cut(s) | 258, 354, 1381 |
| BmrFI | CCNGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| BmrI | ACTGGG | 1 cut(s) | 1158 |
| BmsI | GCATC | 8 cut(s) | 486, 1098, 1156, 1395, 1458, 1500, 1759, 1847 |
| BmtI | GCTAGC | 1 cut(s) | 2058 |
| BmuI | ACTGGG | 1 cut(s) | 1158 |
| BpmI | CTGGAG | 2 cut(s) | 1358, 2057 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 306 |
| BpuEI | CTTGAG | 1 cut(s) | 554 |
| BsaJI | CCNNGG | 6 cut(s) | 442, 812, 856, 906, 949, 1427 |
| BsaWI | WCCGGW | 1 cut(s) | 391 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1237, 1693, 1834 |
| Bse1I | ACTGG | 6 cut(s) | 356, 870, 963, 1125, 1153, 1445 |
| Bse3DI | GCAATG | 3 cut(s) | 210, 1023, 1818 |
| BseBI | CCWGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| BseDI | CCNNGG | 6 cut(s) | 442, 812, 856, 906, 949, 1427 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1237, 1693, 1834 |
| BseMI | GCAATG | 3 cut(s) | 210, 1023, 1818 |
| BseMII | CTCAG | 7 cut(s) | 72, 227, 297, 1071, 1126, 1581, 1702 |
| BseNI | ACTGG | 6 cut(s) | 356, 870, 963, 1125, 1153, 1445 |
| BseRI | GAGGAG | 3 cut(s) | 448, 551, 1628 |
| BseXI | GCAGC | 1 cut(s) | 1537 |
| BsgI | GTGCAG | 1 cut(s) | 1531 |
| BshFI | GGCC | 3 cut(s) | 86, 96, 1710 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1991, 2017 |
| BsiSI | CCGG | 2 cut(s) | 392, 1745 |
| BslFI | GGGAC | 1 cut(s) | 1811 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1237, 1693, 1834 |
| BsmAI | GTCTC | 2 cut(s) | 533, 1751 |
| BsmFI | GGGAC | 1 cut(s) | 1811 |
| BsmI | GAATGC | 3 cut(s) | 254, 453, 694 |
| BsnI | GGCC | 3 cut(s) | 86, 96, 1710 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1991, 2017 |
| Bsp1407I | TGTACA | 2 cut(s) | 794, 888 |
| Bsp143I | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 306 |
| BspACI | CCGC | 2 cut(s) | 1310, 1973 |
| BspANI | GGCC | 3 cut(s) | 86, 96, 1710 |
| BspCNI | CTCAG | 7 cut(s) | 73, 228, 298, 1072, 1125, 1582, 1701 |
| BspLI | GGNNCC | 3 cut(s) | 258, 354, 1381 |
| BspMAI | CTGCAG | 1 cut(s) | 1905 |
| BspOI | GCTAGC | 1 cut(s) | 2058 |
| BspPI | GGATC | 5 cut(s) | 251, 264, 1184, 1451, 1537 |
| BspQI | GCTCTTC | 1 cut(s) | 1797 |
| BsrDI | GCAATG | 3 cut(s) | 210, 1023, 1818 |
| BsrGI | TGTACA | 2 cut(s) | 794, 888 |
| BsrI | ACTGG | 6 cut(s) | 356, 870, 963, 1125, 1153, 1445 |
| BssECI | CCNNGG | 6 cut(s) | 442, 812, 856, 906, 949, 1427 |
| BssMI | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| BssT1I | CCWWGG | 2 cut(s) | 812, 906 |
| Bst2UI | CCWGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| Bst4CI | ACNGT | 4 cut(s) | 1361, 1399, 1682, 2031 |
| Bst6I | CTCTTC | 3 cut(s) | 837, 930, 1797 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1497 |
| BstAUI | TGTACA | 2 cut(s) | 794, 888 |
| BstC8I | GCNNGC | 7 cut(s) | 33, 312, 530, 1548, 1809, 1869, 2056 |
| BstEII | GGTNACC | 3 cut(s) | 820, 914, 2077 |
| BstKTI | GATC | 9 cut(s) | 129, 259, 1192, 1275, 1369, 1459, 1532, 1728, 1928 |
| BstMAI | GTCTC | 2 cut(s) | 533, 1751 |
| BstMBI | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 311, 1497, 1750, 1953 |
| BstNI | CCWGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| BstNSI | RCATGY | 3 cut(s) | 532, 727, 1753 |
| BstPI | GGTNACC | 3 cut(s) | 820, 914, 2077 |
| BstSCI | CCNGG | 6 cut(s) | 442, 679, 1426, 1459, 1833, 2073 |
| BstSFI | CTRYAG | 2 cut(s) | 1678, 1901 |
| BstV1I | GCAGC | 1 cut(s) | 1537 |
| BstX2I | RGATCY | 4 cut(s) | 256, 1456, 1529, 1925 |
| BstYI | RGATCY | 4 cut(s) | 256, 1456, 1529, 1925 |
| BsuRI | GGCC | 3 cut(s) | 86, 96, 1710 |
| BtsIMutI | CAGTG | 4 cut(s) | 1118, 1383, 1404, 1687 |
| Cac8I | GCNNGC | 7 cut(s) | 33, 312, 530, 1548, 1809, 1869, 2056 |
| Cfr13I | GGNCC | 1 cut(s) | 95 |
| DpnI | GATC | 9 cut(s) | 128, 258, 1191, 1274, 1368, 1458, 1531, 1727, 1927 |
| DpnII | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 119 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 119 |
| Eam1104I | CTCTTC | 3 cut(s) | 837, 930, 1797 |
| EarI | CTCTTC | 3 cut(s) | 837, 930, 1797 |
| Ecl136II | GAGCTC | 1 cut(s) | 2015 |
| Eco130I | CCWWGG | 2 cut(s) | 812, 906 |
| Eco24I | GRGCYC | 1 cut(s) | 2017 |
| Eco53kI | GAGCTC | 1 cut(s) | 2015 |
| Eco57I | CTGAAG | 5 cut(s) | 33, 263, 396, 431, 968 |
| Eco91I | GGTNACC | 3 cut(s) | 820, 914, 2077 |
| EcoICRI | GAGCTC | 1 cut(s) | 2015 |
| EcoO65I | GGTNACC | 3 cut(s) | 820, 914, 2077 |
| EcoRII | CCWGG | 6 cut(s) | 442, 679, 1426, 1459, 1833, 2073 |
| EcoT14I | CCWWGG | 2 cut(s) | 812, 906 |
| EcoT22I | ATGCAT | 2 cut(s) | 1524, 1755 |
| EcoT38I | GRGCYC | 1 cut(s) | 2017 |
| ErhI | CCWWGG | 2 cut(s) | 812, 906 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 84, 116 |
| FaqI | GGGAC | 1 cut(s) | 1811 |
| FbaI | TGATCA | 1 cut(s) | 1725 |
| Fnu4HI | GCNGC | 2 cut(s) | 1551, 1974 |
| FriOI | GRGCYC | 1 cut(s) | 2017 |
| Fsp4HI | GCNGC | 2 cut(s) | 1551, 1974 |
| FspBI | CTAG | 8 cut(s) | 137, 197, 476, 611, 1064, 1307, 1953, 2055 |
| GluI | GCNGC | 2 cut(s) | 1551, 1974 |
| GsuI | CTGGAG | 2 cut(s) | 1358, 2057 |
| HaeIII | GGCC | 3 cut(s) | 86, 96, 1710 |
| HapII | CCGG | 2 cut(s) | 392, 1745 |
| HincII | GTYRAC | 2 cut(s) | 686, 1357 |
| HindII | GTYRAC | 2 cut(s) | 686, 1357 |
| HindIII | AAGCTT | 3 cut(s) | 312, 413, 1544 |
| HinfI | GANTC | 3 cut(s) | 607, 989, 1388 |
| HpaII | CCGG | 2 cut(s) | 392, 1745 |
| HphI | GGTGA | 1 cut(s) | 2089 |
| Hpy166II | GTNNAC | 9 cut(s) | 134, 686, 795, 889, 1044, 1118, 1357, 1395, 1578 |
| Hpy188III | TCNNGA | 5 cut(s) | 124, 180, 734, 986, 1337 |
| Hpy8I | GTNNAC | 9 cut(s) | 134, 686, 795, 889, 1044, 1118, 1357, 1395, 1578 |
| HpyAV | CCTTC | 4 cut(s) | 8, 161, 287, 1658 |
| HpyCH4III | ACNGT | 4 cut(s) | 1361, 1399, 1682, 2031 |
| HpyCH4IV | ACGT | 3 cut(s) | 676, 1046, 2113 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 311, 1497, 1750, 1953 |
| HpySE526I | ACGT | 3 cut(s) | 676, 1046, 2113 |
| Ksp22I | TGATCA | 1 cut(s) | 1725 |
| Kzo9I | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| LguI | GCTCTTC | 1 cut(s) | 1797 |
| LmnI | GCTCC | 3 cut(s) | 1339, 1379, 2076 |
| Lsp1109I | GCAGC | 1 cut(s) | 1537 |
| LweI | GCATC | 8 cut(s) | 486, 1098, 1156, 1395, 1458, 1500, 1759, 1847 |
| MaeI | CTAG | 8 cut(s) | 137, 197, 476, 611, 1064, 1307, 1953, 2055 |
| MaeII | ACGT | 3 cut(s) | 676, 1046, 2113 |
| MaeIII | GTNAC | 4 cut(s) | 820, 914, 1682, 2077 |
| MalI | GATC | 9 cut(s) | 128, 258, 1191, 1274, 1368, 1458, 1531, 1727, 1927 |
| MboI | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| MflI | RGATCY | 4 cut(s) | 256, 1456, 1529, 1925 |
| MhlI | GDGCHC | 2 cut(s) | 1991, 2017 |
| MmeI | TCCRAC | 2 cut(s) | 693, 1548 |
| Mph1103I | ATGCAT | 2 cut(s) | 1524, 1755 |
| MroXI | GAANNNNTTC | 3 cut(s) | 477, 966, 1448 |
| MseI | TTAA | 9 cut(s) | 488, 501, 624, 711, 830, 1854, 1895, 2036, 2060 |
| MslI | CAYNNNNRTG | 4 cut(s) | 513, 924, 1057, 1400 |
| MspA1I | CMGCKG | 1 cut(s) | 263 |
| MspI | CCGG | 2 cut(s) | 392, 1745 |
| MspR9I | CCNGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| Mva1269I | GAATGC | 3 cut(s) | 254, 453, 694 |
| MvaI | CCWGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 311, 1497, 1750, 1953 |
| NdeII | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| NheI | GCTAGC | 1 cut(s) | 2054 |
| NlaIV | GGNNCC | 3 cut(s) | 258, 354, 1381 |
| NmuCI | GTSAC | 2 cut(s) | 1682, 2077 |
| NsiI | ATGCAT | 2 cut(s) | 1524, 1755 |
| NspI | RCATGY | 3 cut(s) | 532, 727, 1753 |
| PaeI | GCATGC | 1 cut(s) | 532 |
| PciI | ACATGT | 1 cut(s) | 723 |
| PciSI | GCTCTTC | 1 cut(s) | 1797 |
| PctI | GAATGC | 3 cut(s) | 254, 453, 694 |
| PdmI | GAANNNNTTC | 3 cut(s) | 477, 966, 1448 |
| PfeI | GAWTC | 3 cut(s) | 607, 989, 1388 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1237 |
| PkrI | GCNGC | 2 cut(s) | 1552, 1975 |
| PscI | ACATGT | 1 cut(s) | 723 |
| PshBI | ATTAAT | 1 cut(s) | 1854 |
| PsiI | TTATAA | 1 cut(s) | 548 |
| Psp124BI | GAGCTC | 1 cut(s) | 2017 |
| Psp6I | CCWGG | 6 cut(s) | 442, 679, 1426, 1459, 1833, 2073 |
| PspEI | GGTNACC | 3 cut(s) | 820, 914, 2077 |
| PspGI | CCWGG | 6 cut(s) | 442, 679, 1426, 1459, 1833, 2073 |
| PspN4I | GGNNCC | 3 cut(s) | 258, 354, 1381 |
| PspPI | GGNCC | 1 cut(s) | 95 |
| PstI | CTGCAG | 1 cut(s) | 1905 |
| PsuI | RGATCY | 4 cut(s) | 256, 1456, 1529, 1925 |
| PvuII | CAGCTG | 1 cut(s) | 263 |
| RseI | CAYNNNNRTG | 4 cut(s) | 513, 924, 1057, 1400 |
| SacI | GAGCTC | 1 cut(s) | 2017 |
| SapI | GCTCTTC | 1 cut(s) | 1797 |
| SaqAI | TTAA | 9 cut(s) | 488, 501, 624, 711, 830, 1854, 1895, 2036, 2060 |
| SatI | GCNGC | 2 cut(s) | 1551, 1974 |
| Sau3AI | GATC | 9 cut(s) | 126, 256, 1189, 1272, 1366, 1456, 1529, 1725, 1925 |
| Sau96I | GGNCC | 1 cut(s) | 95 |
| ScaI | AGTACT | 4 cut(s) | 195, 360, 864, 957 |
| ScrFI | CCNGG | 6 cut(s) | 444, 681, 1428, 1461, 1835, 2075 |
| SduI | GDGCHC | 2 cut(s) | 1991, 2017 |
| SfaNI | GCATC | 8 cut(s) | 486, 1098, 1156, 1395, 1458, 1500, 1759, 1847 |
| SfcI | CTRYAG | 2 cut(s) | 1678, 1901 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 513, 924, 1057, 1400 |
| SmlI | CTYRAG | 1 cut(s) | 533 |
| SmoI | CTYRAG | 1 cut(s) | 533 |
| SpeI | ACTAGT | 2 cut(s) | 196, 475 |
| SphI | GCATGC | 1 cut(s) | 532 |
| SsiI | CCGC | 2 cut(s) | 1310, 1973 |
| SspMI | CTAG | 8 cut(s) | 137, 197, 476, 611, 1064, 1307, 1953, 2055 |
| SstI | GAGCTC | 1 cut(s) | 2017 |
| StyD4I | CCNGG | 6 cut(s) | 442, 679, 1426, 1459, 1833, 2073 |
| StyI | CCWWGG | 2 cut(s) | 812, 906 |
| TaaI | ACNGT | 4 cut(s) | 1361, 1399, 1682, 2031 |
| TaiI | ACGT | 3 cut(s) | 679, 1049, 2116 |
| TaqI | TCGA | 2 cut(s) | 974, 2011 |
| TatI | WGTACW | 8 cut(s) | 131, 193, 358, 662, 794, 862, 888, 955 |
| TauI | GCSGC | 1 cut(s) | 1976 |
| TfiI | GAWTC | 3 cut(s) | 607, 989, 1388 |
| Tru1I | TTAA | 9 cut(s) | 488, 501, 624, 711, 830, 1854, 1895, 2036, 2060 |
| Tru9I | TTAA | 9 cut(s) | 488, 501, 624, 711, 830, 1854, 1895, 2036, 2060 |
| TscAI | CASTG | 4 cut(s) | 1125, 1390, 1404, 1687 |
| TseFI | GTSAC | 2 cut(s) | 1682, 2077 |
| TseI | GCWGC | 1 cut(s) | 1550 |
| Tsp45I | GTSAC | 2 cut(s) | 1682, 2077 |
| TspRI | CASTG | 4 cut(s) | 1125, 1390, 1404, 1687 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1237 |
| VspI | ATTAAT | 1 cut(s) | 1854 |
| XapI | RAATTY | 3 cut(s) | 742, 775, 1010 |
| XceI | RCATGY | 3 cut(s) | 532, 727, 1753 |
| XmnI | GAANNNNTTC | 3 cut(s) | 477, 966, 1448 |
| XspI | CTAG | 8 cut(s) | 137, 197, 476, 611, 1064, 1307, 1953, 2055 |
| ZrmI | AGTACT | 4 cut(s) | 195, 360, 864, 957 |
| Zsp2I | ATGCAT | 2 cut(s) | 1524, 1755 |