RLG00000010627

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0004846
Physical Location & Seq
Reverse (-)
3075305 .. 3077744
2440 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010627

Sequence Viewer

Length: 2424 bp
ATGGTGCGACTGAGGAGTTCAACTAAACTCATGGACAGGGTTCCGTTTCTGTGCCTTGTTCTTGGTTTTGCACTAATTTTTCCATTCAAATCATCAACAGCTTTTAATTTGAGCATGGGATCCTTCCTTTCAGTAGAAAATCCATCTCAAACTTTGATGTCTCCGGACGCAGTATTTACCGCTGGCTTTTTTCCGGTCGGTGAAAATGCGTTTTGCTTCGGAATATGGTTCTCGGAGCCATCAACCAGTACACACAACCTCACCGTGGTGTGGATAGCAAATAGTGACGAGCCGGTCAACGGTCAACGCTCTAAGCTCACCCTGCAGAAAAGTGGAAACCTTATTCTCTCCGACATCGACCGATACACCGTGTGGTCCTCCAACACAGCTTCAAACTCATCGGCCCACTTGCACCTTAGAAACACCGGCAATCTTGTTCTGCTCGCTGAGCACGGCGGCGGCGTATTGTGGGAAAGCTTTGCTTCGCCGACGGACACACTATTGCCTCAGCAAGCGCTCACTAGAAACACACAGCTCATTTCTTCAAGAAGCCTCACCAACTATTCCTCTGGCTTCTACTCTTTTTACTTCGACAACGACAACACTCTTCGTATGCTCTACAATGGCCCCGAGGTTTCGAGCATTTACTGGCCTGATCCATGGCTTCTGAGTTGGCAAGTAGGAAGATCCACATACAACAACAGTCGAATTGCAACTTTTGACAGCTTGGGAAATTTTAGTGCATCTGATAATTTTGTCGTTTGGACAATCGACTACGGTGCAAATTTGCAGCGAATATTCAGGATGGATGTAGATGGTAATCTCCGAAGTTACAGTCGAAAAGGTCCTGGAGATAAATGGATTGTTACATGGGAGGCAGTTTTACAACCTTGTAAAATTCATGGCATATGCGGAGCTAATAGCTATTGCAGTTATATTCCTAGTACAGGTAGGAAATGCTCATGCCTGCCGGGTTATGAAATGATCAGTAAAACCGATTGGTCTTATGGGTGTAAACCGGCTGGTTTCAATCTGTCCTGCAAGAGTAGTGCACGGGAGGAGTTTGGTTTTGTGCATCTTCCACGTATTGACATGTATGGTTATGATTATGCCGTCTATGGCAATTACACATTAGATGAGTGCAAAAGTTTGTGCCTGGACTTGTGCAACTGTACTGCATTCCACCACAAATTTGGTGGTGGTCAGTATCAGTGTTATCCCAAGGCGCAATTACGAAATGGGTACCGGTCACCTGCTTTTGATGGGGAGCTGTATGTCAAGCTACCAAAAGGCCTCCTCAATGCTACCTATAGAGATACCAACATGTGCTCAGCTAAACTTACAGCACAGCTTGACAGAACATATGAAAGAAGCAAGCCCAATGGATCGATTGAGTTTATGCTGAAATTTGCATCTGCCTTGGGAGGAATAGAGGTTATTTGCATCTTTGTTGTGTGGTTTTTTGTGACAAGAAGAAGCGGTGGAGATAAAAAAGATTCAGAACTAGAACTACTTGCTCAAGGCTACCTTCAAGCTGCCAGTGGATTCAGAAGGTTTACTTACTCCGAGTTGAAGAAGGCCACAAAAGGTTTTAAAGAAGAGATTGGCAGAGGAGGAGGAGGAGTTGTGTACAAAGGCATATTGTCTGATCAACGAGTTGCAGCGATCAAGCAACTGAATGATTGTAAACAAGGGGGTGAAGCAGAGTTCCTTGCAGAAGTGAGCCTTATTGGTAAGCTCTACCATATGAACTTGATAGAGATGTGGGGTTATTGCGTAGAGGACAAGCATAGGCTTCTAGTGTATGAGTACATGGAGCATGGTTCTTTGGCGAAAAATTTATCTTCCAATGTGCTTGATTGGAAGAAGAGGTATGAAATTGCTCTAGGCACAGCGAAAGGCCTGGCTTATCTGCATGAAGAGTGCTTGGAATGGGTTTTACACTGTGATGTGAAGCCCCAAAACATACTATTGGACTCCGATTACAGTCCAAAGGTAGCTGATTTTGGATTGTCCAAGCTATTAAACAGAGGTGAGAACACCAGCTCGGACTTCTCGAGGATAAGAGGAACCAGAGGTTACATGGCTCCGGAGTGGGTGCACAATATGCCAATCACTTCCAAAGTGGATGTCTACAGTTACGGGATTGTTGTATTGGAGATGCTGACCGGAAAGAACCCAACTGAAAGCAACGTTCAAACTGTTGAAGGTGGAGGGGAGACACAGAAGCAAATAATGGTCAAATGGGTCATGGAGAAAATGGATGGAGCGTTTACAAATGCAGAGACTGAGATGGGAGGTGAAAATGGAGAGGGTAAGCTGGAAATTCTTGTTAAAGTGGCTCTTCAGTGTATAGAGGAAGACAGAAATGCAAGACCCTCAATGAGTCGAGTAGTTGAGATGCTTCTACATCATGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

808

Amino Acids

90.47

Weight (kDa)

6.62

Isoelectric Point (pI)

38.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 88 - 186 1.1e-23 D-mannose binding lectin
S_locus_glycop PF00954 254 - 327 2.2e-07 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 531 - 802 2.1e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 532 - 800 5e-53 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1261
AasI GACNNNNNNGTC 1 cut(s) 293
Acc36I ACCTGC 1 cut(s) 1261
Acc65I GGTACC 1 cut(s) 1242
AccB1I GGYRCC 1 cut(s) 1242
AccI GTMKAC 1 cut(s) 2133
AccIII TCCGGA 2 cut(s) 163, 2089
AciI CCGC 5 cut(s) 180, 456, 459, 912, 1479
AclI AACGTT 1 cut(s) 2193
AclWI GGATC 5 cut(s) 114, 127, 650, 681, 1393
AcsI RAATTY 7 cut(s) 733, 784, 897, 1190, 1406, 1837, 2325
AcuI CTGAAG 1 cut(s) 2330
AdeI CACNNNGTG 1 cut(s) 372
AfaI GTAC 6 cut(s) 250, 946, 1174, 1244, 1631, 1811
AfeI AGCGCT 1 cut(s) 516
AfiI CCNNNNNNNGG 4 cut(s) 265, 270, 299, 947
AflIII ACRYGT 2 cut(s) 1092, 1323
AgeI ACCGGT 1 cut(s) 1245
AgsI TTSAA 9 cut(s) 21, 88, 393, 546, 1030, 1532, 1573, 2198, 2207
AjnI CCWGG 3 cut(s) 847, 1155, 1902
AleI CACNNNNGTG 1 cut(s) 266
Alw21I GWGCWC 4 cut(s) 453, 1054, 1331, 2103
Alw26I GTCTC 3 cut(s) 165, 2213, 2279
Alw44I GTGCAC 2 cut(s) 1050, 2099
AlwI GGATC 5 cut(s) 114, 127, 650, 681, 1393
AlwNI CAGNNNCTG 1 cut(s) 2288
Ama87I CYCGRG 2 cut(s) 629, 2056
Aor13HI TCCGGA 2 cut(s) 163, 2089
Aor51HI AGCGCT 1 cut(s) 516
AoxI GGCC 6 cut(s) 402, 625, 650, 1291, 1578, 1900
ApaLI GTGCAC 2 cut(s) 1050, 2099
ApeKI GCWGC 3 cut(s) 790, 1535, 1661
ApoI RAATTY 7 cut(s) 733, 784, 897, 1190, 1406, 1837, 2325
ArsI GACNNNNNNTTYG 4 cut(s) 820, 852, 2115, 2147
AsiGI ACCGGT 1 cut(s) 1245
Asp718I GGTACC 1 cut(s) 1242
AspLEI GCGC 2 cut(s) 517, 1228
AspS9I GGNCC 4 cut(s) 375, 403, 626, 845
AsuC2I CCSGG 1 cut(s) 972
AsuHPI GGTGA 8 cut(s) 212, 253, 310, 547, 1242, 1709, 2045, 2312
AvaI CYCGRG 2 cut(s) 629, 2056
AvaII GGWCC 2 cut(s) 375, 845
BaeGI GKGCMC 2 cut(s) 1054, 2103
BamHI GGATCC 1 cut(s) 119
BanI GGYRCC 1 cut(s) 1242
BbsI GAAGAC 1 cut(s) 2367
Bbv12I GWGCWC 4 cut(s) 453, 1054, 1331, 2103
BbvCI CCTCAGC 1 cut(s) 507
BbvI GCAGC 3 cut(s) 802, 1522, 1673
BccI CCATC 7 cut(s) 151, 247, 799, 809, 1256, 2258, 2287
BceAI ACGGC 2 cut(s) 469, 1097
BcgI CGANNNNNNTGC 2 cut(s) 761, 795
BciT130I CCWGG 3 cut(s) 849, 1157, 1904
BclI TGATCA 2 cut(s) 984, 1648
BcnI CCSGG 1 cut(s) 972
BcoDI GTCTC 3 cut(s) 165, 2213, 2279
BfaI CTAG 5 cut(s) 522, 942, 1505, 1799, 1886
BfmI CTRYAG 3 cut(s) 323, 1309, 2134
BfoI RGCGCY 1 cut(s) 518
BfuAI ACCTGC 1 cut(s) 1261
BisI GCNGC 5 cut(s) 457, 460, 791, 1536, 1662
BlpI GCTNAGC 2 cut(s) 447, 1330
BlsI GCNGC 5 cut(s) 458, 461, 792, 1537, 1663
Bme1390I CCNGG 4 cut(s) 849, 972, 1157, 1904
Bme18I GGWCC 2 cut(s) 375, 845
BmeT110I CYCGRG 2 cut(s) 629, 2056
BmgT120I GGNCC 4 cut(s) 375, 403, 626, 845
BmiI GGNNCC 7 cut(s) 42, 121, 237, 628, 1244, 2071, 2088
BmrFI CCNGG 4 cut(s) 849, 972, 1157, 1904
BmsI GCATC 6 cut(s) 752, 1084, 1421, 1452, 2151, 2391
BpiI GAAGAC 1 cut(s) 2367
BpmI CTGGAG 1 cut(s) 870
Bpu10I CCTNAGC 1 cut(s) 507
Bpu1102I GCTNAGC 2 cut(s) 447, 1330
BpuEI CTTGAG 1 cut(s) 1503
BpuMI CCSGG 1 cut(s) 972
Bsa29I ATCGAT 1 cut(s) 1388
BsaAI YACGTR 1 cut(s) 1085
BsaBI GATNNNNATC 1 cut(s) 819
BsaJI CCNNGG 5 cut(s) 264, 630, 659, 1221, 1419
BsaWI WCCGGW 5 cut(s) 163, 193, 1245, 2089, 2168
BsaXI ACNNNNNCTCC 4 cut(s) 1608, 1611, 1638, 1641
Bsc4I CCNNNNNNNGG 4 cut(s) 265, 270, 299, 947
Bse118I RCCGGY 4 cut(s) 292, 425, 1018, 1245
Bse1I ACTGG 3 cut(s) 246, 653, 1539
Bse8I GATNNNNATC 1 cut(s) 819
BseAI TCCGGA 2 cut(s) 163, 2089
BseBI CCWGG 3 cut(s) 849, 1157, 1904
BseCI ATCGAT 1 cut(s) 1388
BseDI CCNNGG 5 cut(s) 264, 630, 659, 1221, 1419
BseGI GGATG 4 cut(s) 810, 814, 2134, 2269
BseJI GATNNNNATC 1 cut(s) 819
BseLI CCNNNNNNNGG 4 cut(s) 265, 270, 299, 947
BseMII CTCAG 5 cut(s) 438, 521, 659, 1344, 2280
BseNI ACTGG 3 cut(s) 246, 653, 1539
BseRI GAGGAG 7 cut(s) 28, 1073, 1286, 1626, 1629, 1632, 1635
BseSI GKGCMC 2 cut(s) 1054, 2103
BseXI GCAGC 3 cut(s) 802, 1522, 1673
Bsh1285I CGRYCG 2 cut(s) 198, 361
BshFI GGCC 6 cut(s) 404, 627, 652, 1293, 1580, 1902
BshNI GGYRCC 1 cut(s) 1242
BshTI ACCGGT 1 cut(s) 1245
BshVI ATCGAT 1 cut(s) 1388
BsiEI CGRYCG 2 cut(s) 198, 361
BsiHKAI GWGCWC 4 cut(s) 453, 1054, 1331, 2103
BsiHKCI CYCGRG 2 cut(s) 629, 2056
BsiSI CCGG 9 cut(s) 164, 194, 293, 426, 971, 1019, 1246, 2090, 2169
BslI CCNNNNNNNGG 4 cut(s) 265, 270, 299, 947
BsmAI GTCTC 3 cut(s) 165, 2213, 2279
BsmI GAATGC 1 cut(s) 1178
BsnI GGCC 6 cut(s) 404, 627, 652, 1293, 1580, 1902
BsoBI CYCGRG 2 cut(s) 629, 2056
Bsp1286I GDGCHC 4 cut(s) 453, 1054, 1331, 2103
Bsp13I TCCGGA 2 cut(s) 163, 2089
Bsp1407I TGTACA 1 cut(s) 1629
Bsp143I GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
Bsp1720I GCTNAGC 2 cut(s) 447, 1330
Bsp19I CCATGG 1 cut(s) 659
BspACI CCGC 5 cut(s) 180, 456, 459, 912, 1479
BspANI GGCC 6 cut(s) 404, 627, 652, 1293, 1580, 1902
BspCNI CTCAG 5 cut(s) 439, 520, 660, 1343, 2281
BspDI ATCGAT 1 cut(s) 1388
BspEI TCCGGA 2 cut(s) 163, 2089
BspHI TCATGA 1 cut(s) 2413
BspLI GGNNCC 7 cut(s) 42, 121, 237, 628, 1244, 2071, 2088
BspMAI CTGCAG 1 cut(s) 327
BspMI ACCTGC 1 cut(s) 1261
BspPI GGATC 5 cut(s) 114, 127, 650, 681, 1393
BspQI GCTCTTC 1 cut(s) 2349
BspT107I GGYRCC 1 cut(s) 1242
BsrFI RCCGGY 4 cut(s) 292, 425, 1018, 1245
BsrGI TGTACA 1 cut(s) 1629
BsrI ACTGG 3 cut(s) 246, 653, 1539
BssAI RCCGGY 4 cut(s) 292, 425, 1018, 1245
BssECI CCNNGG 5 cut(s) 264, 630, 659, 1221, 1419
BssMI GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
BssT1I CCWWGG 3 cut(s) 659, 1221, 1419
Bst2UI CCWGG 3 cut(s) 849, 1157, 1904
Bst6I CTCTTC 5 cut(s) 612, 1593, 1862, 1914, 2349
BstAPI GCANNNNNTGC 1 cut(s) 2107
BstAUI TGTACA 1 cut(s) 1629
BstBAI YACGTR 1 cut(s) 1085
BstC8I GCNNGC 5 cut(s) 184, 444, 513, 968, 1376
BstDEI CTNAG 8 cut(s) 11, 312, 416, 447, 507, 668, 1330, 2289
BstDSI CCRYGG 2 cut(s) 264, 659
BstEII GGTNACC 1 cut(s) 1248
BstENI CCTNNNNNAGG 1 cut(s) 945
BstF5I GGATG 4 cut(s) 810, 814, 2134, 2269
BstH2I RGCGCY 1 cut(s) 518
BstHHI GCGC 2 cut(s) 517, 1228
BstKTI GATC 7 cut(s) 122, 658, 689, 987, 1388, 1651, 1668
BstMAI GTCTC 3 cut(s) 165, 2213, 2279
BstMBI GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
BstMCI CGRYCG 2 cut(s) 198, 361
BstMWI GCNNNNNNNGC 3 cut(s) 322, 448, 2107
BstNI CCWGG 3 cut(s) 849, 1157, 1904
BstNSI RCATGY 2 cut(s) 1096, 1327
BstPI GGTNACC 1 cut(s) 1248
BstSCI CCNGG 4 cut(s) 847, 970, 1155, 1902
BstSFI CTRYAG 3 cut(s) 323, 1309, 2134
BstSLI GKGCMC 2 cut(s) 1054, 2103
BstV1I GCAGC 3 cut(s) 802, 1522, 1673
BstV2I GAAGAC 1 cut(s) 2367
BstX2I RGATCY 2 cut(s) 119, 686
BstXI CCANNNNNNTGG 1 cut(s) 1193
BstYI RGATCY 2 cut(s) 119, 686
Bsu15I ATCGAT 1 cut(s) 1388
BsuRI GGCC 6 cut(s) 404, 627, 652, 1293, 1580, 1902
BsuTUI ATCGAT 1 cut(s) 1388
BtgI CCRYGG 2 cut(s) 264, 659
BtsCI GGATG 4 cut(s) 810, 814, 2134, 2269
BtsIMutI CAGTG 4 cut(s) 1217, 1546, 1942, 2354
BveI ACCTGC 1 cut(s) 1261
Cac8I GCNNGC 5 cut(s) 184, 444, 513, 968, 1376
CaiI CAGNNNCTG 1 cut(s) 2288
CciI TCATGA 1 cut(s) 2413
CfoI GCGC 2 cut(s) 517, 1228
Cfr10I RCCGGY 4 cut(s) 292, 425, 1018, 1245
Cfr13I GGNCC 4 cut(s) 375, 403, 626, 845
ClaI ATCGAT 1 cut(s) 1388
CseI GACGC 1 cut(s) 176
Csp6I GTAC 6 cut(s) 249, 945, 1173, 1243, 1630, 1810
CspAI ACCGGT 1 cut(s) 1245
CspCI CAANNNNNGTGG 2 cut(s) 1177, 1212
CviQI GTAC 6 cut(s) 249, 945, 1173, 1243, 1630, 1810
DdeI CTNAG 8 cut(s) 11, 312, 416, 447, 507, 668, 1330, 2289
DpnI GATC 7 cut(s) 121, 657, 688, 986, 1387, 1650, 1667
DpnII GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
DraI TTTAAA 1 cut(s) 1594
DraIII CACNNNGTG 1 cut(s) 372
DrdI GACNNNNNNGTC 1 cut(s) 293
DseDI GACNNNNNNGTC 1 cut(s) 293
Eam1104I CTCTTC 5 cut(s) 612, 1593, 1862, 1914, 2349
EarI CTCTTC 5 cut(s) 612, 1593, 1862, 1914, 2349
Eco130I CCWWGG 3 cut(s) 659, 1221, 1419
Eco147I AGGCCT 2 cut(s) 1293, 1902
Eco47I GGWCC 2 cut(s) 375, 845
Eco47III AGCGCT 1 cut(s) 516
Eco57I CTGAAG 1 cut(s) 2330
Eco88I CYCGRG 2 cut(s) 629, 2056
Eco91I GGTNACC 1 cut(s) 1248
EcoNI CCTNNNNNAGG 1 cut(s) 945
EcoO109I RGGNCCY 1 cut(s) 845
EcoO65I GGTNACC 1 cut(s) 1248
EcoRII CCWGG 3 cut(s) 847, 1155, 1902
EcoT14I CCWWGG 3 cut(s) 659, 1221, 1419
ErhI CCWWGG 3 cut(s) 659, 1221, 1419
FauNDI CATATG 3 cut(s) 908, 1363, 1746
FbaI TGATCA 2 cut(s) 984, 1648
FblI GTMKAC 1 cut(s) 2133
Fnu4HI GCNGC 5 cut(s) 457, 460, 791, 1536, 1662
FokI GGATG 4 cut(s) 817, 821, 2141, 2276
Fsp4HI GCNGC 5 cut(s) 457, 460, 791, 1536, 1662
FspBI CTAG 5 cut(s) 522, 942, 1505, 1799, 1886
GlaI GCGC 2 cut(s) 516, 1227
GluI GCNGC 5 cut(s) 457, 460, 791, 1536, 1662
GsuI CTGGAG 1 cut(s) 870
HaeII RGCGCY 1 cut(s) 518
HaeIII GGCC 6 cut(s) 404, 627, 652, 1293, 1580, 1902
HapII CCGG 9 cut(s) 164, 194, 293, 426, 971, 1019, 1246, 2090, 2169
HgaI GACGC 1 cut(s) 176
HhaI GCGC 2 cut(s) 517, 1228
Hin6I GCGC 2 cut(s) 515, 1226
HinP1I GCGC 2 cut(s) 515, 1226
HincII GTYRAC 2 cut(s) 298, 305
HindII GTYRAC 2 cut(s) 298, 305
HindIII AAGCTT 1 cut(s) 475
HinfI GANTC 4 cut(s) 1496, 1545, 1976, 2386
HpaII CCGG 9 cut(s) 164, 194, 293, 426, 971, 1019, 1246, 2090, 2169
HphI GGTGA 8 cut(s) 212, 253, 310, 547, 1242, 1709, 2045, 2312
Hpy188III TCNNGA 6 cut(s) 164, 546, 802, 2056, 2090, 2414
Hpy99I CGWCG 1 cut(s) 493
HpyAV CCTTC 5 cut(s) 133, 1538, 1545, 1570, 2201
HpyCH4IV ACGT 2 cut(s) 1084, 2193
HpyF10VI GCNNNNNNNGC 3 cut(s) 322, 448, 2107
HpyF3I CTNAG 8 cut(s) 11, 312, 416, 447, 507, 668, 1330, 2289
HpySE526I ACGT 2 cut(s) 1084, 2193
HspAI GCGC 2 cut(s) 515, 1226
Kpn2I TCCGGA 2 cut(s) 163, 2089
KpnI GGTACC 1 cut(s) 1246
Ksp22I TGATCA 2 cut(s) 984, 1648
Kzo9I GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
LguI GCTCTTC 1 cut(s) 2349
LmnI GCTCC 6 cut(s) 235, 914, 1267, 1816, 2092, 2267
Lsp1109I GCAGC 3 cut(s) 802, 1522, 1673
LweI GCATC 6 cut(s) 752, 1084, 1421, 1452, 2151, 2391
MaeI CTAG 5 cut(s) 522, 942, 1505, 1799, 1886
MaeII ACGT 2 cut(s) 1084, 2193
MaeIII GTNAC 7 cut(s) 284, 830, 865, 1248, 1465, 2078, 2138
MalI GATC 7 cut(s) 121, 657, 688, 986, 1387, 1650, 1667
MboI GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
MflI RGATCY 2 cut(s) 119, 686
MhlI GDGCHC 4 cut(s) 453, 1054, 1331, 2103
MlyI GAGTC 2 cut(s) 1970, 2395
MmeI TCCRAC 2 cut(s) 375, 405
MroI TCCGGA 2 cut(s) 163, 2089
MseI TTAA 4 cut(s) 105, 1593, 2024, 2334
MslI CAYNNNNRTG 2 cut(s) 266, 1947
MspA1I CMGCKG 1 cut(s) 182
MspI CCGG 9 cut(s) 164, 194, 293, 426, 971, 1019, 1246, 2090, 2169
MspR9I CCNGG 4 cut(s) 849, 972, 1157, 1904
Mva1269I GAATGC 1 cut(s) 1178
MvaI CCWGG 3 cut(s) 849, 1157, 1904
MwoI GCNNNNNNNGC 3 cut(s) 322, 448, 2107
NciI CCSGG 1 cut(s) 972
NcoI CCATGG 1 cut(s) 659
NdeI CATATG 3 cut(s) 908, 1363, 1746
NdeII GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
NlaIV GGNNCC 7 cut(s) 42, 121, 237, 628, 1244, 2071, 2088
NmuCI GTSAC 3 cut(s) 284, 1248, 1465
NspI RCATGY 2 cut(s) 1096, 1327
OliI CACNNNNGTG 1 cut(s) 266
PaeR7I CTCGAG 1 cut(s) 2056
PagI TCATGA 1 cut(s) 2413
PaqCI CACCTGC 1 cut(s) 1261
PceI AGGCCT 2 cut(s) 1293, 1902
PciI ACATGT 2 cut(s) 1092, 1323
PciSI GCTCTTC 1 cut(s) 2349
PcsI WCGNNNNNNNCGW 2 cut(s) 459, 2054
PctI GAATGC 1 cut(s) 1178
PfeI GAWTC 2 cut(s) 1496, 1545
PfoI TCCNGGA 1 cut(s) 847
PinAI ACCGGT 1 cut(s) 1245
PkrI GCNGC 5 cut(s) 458, 461, 792, 1537, 1663
PleI GAGTC 2 cut(s) 1970, 2394
PpsI GAGTC 2 cut(s) 1970, 2394
Ppu21I YACGTR 1 cut(s) 1085
PpuMI RGGWCCY 1 cut(s) 845
PscI ACATGT 2 cut(s) 1092, 1323
Psp1406I AACGTT 1 cut(s) 2193
Psp5II RGGWCCY 1 cut(s) 845
Psp6I CCWGG 3 cut(s) 847, 1155, 1902
PspEI GGTNACC 1 cut(s) 1248
PspGI CCWGG 3 cut(s) 847, 1155, 1902
PspN4I GGNNCC 7 cut(s) 42, 121, 237, 628, 1244, 2071, 2088
PspPI GGNCC 4 cut(s) 375, 403, 626, 845
PspPPI RGGWCCY 1 cut(s) 845
PsrI GAACNNNNNNTAC 2 cut(s) 1494, 1526
PstI CTGCAG 1 cut(s) 327
PstNI CAGNNNCTG 1 cut(s) 2288
PsuI RGATCY 2 cut(s) 119, 686
RsaI GTAC 6 cut(s) 250, 946, 1174, 1244, 1631, 1811
RsaNI GTAC 6 cut(s) 249, 945, 1173, 1243, 1630, 1810
RseI CAYNNNNRTG 2 cut(s) 266, 1947
SapI GCTCTTC 1 cut(s) 2349
SaqAI TTAA 4 cut(s) 105, 1593, 2024, 2334
SatI GCNGC 5 cut(s) 457, 460, 791, 1536, 1662
Sau3AI GATC 7 cut(s) 119, 655, 686, 984, 1385, 1648, 1665
Sau96I GGNCC 4 cut(s) 375, 403, 626, 845
SchI GAGTC 2 cut(s) 1970, 2395
ScrFI CCNGG 4 cut(s) 849, 972, 1157, 1904
SduI GDGCHC 4 cut(s) 453, 1054, 1331, 2103
SfaNI GCATC 6 cut(s) 752, 1084, 1421, 1452, 2151, 2391
SfcI CTRYAG 3 cut(s) 323, 1309, 2134
Sfr274I CTCGAG 1 cut(s) 2056
SinI GGWCC 2 cut(s) 375, 845
SlaI CTCGAG 1 cut(s) 2056
SmiMI CAYNNNNRTG 2 cut(s) 266, 1947
SmlI CTYRAG 2 cut(s) 1518, 2056
SmoI CTYRAG 2 cut(s) 1518, 2056
SseBI AGGCCT 2 cut(s) 1293, 1902
SsiI CCGC 5 cut(s) 180, 456, 459, 912, 1479
SspI AATATT 1 cut(s) 798
SspMI CTAG 5 cut(s) 522, 942, 1505, 1799, 1886
StuI AGGCCT 2 cut(s) 1293, 1902
StyD4I CCNGG 4 cut(s) 847, 970, 1155, 1902
StyI CCWWGG 3 cut(s) 659, 1221, 1419
TaiI ACGT 2 cut(s) 1087, 2196
TaqI TCGA 9 cut(s) 357, 591, 638, 706, 771, 838, 1388, 2057, 2389
TaqII GACCGA 1 cut(s) 375
TatI WGTACW 5 cut(s) 248, 944, 1172, 1629, 1809
TauI GCSGC 2 cut(s) 459, 462
TfiI GAWTC 2 cut(s) 1496, 1545
Tru1I TTAA 4 cut(s) 105, 1593, 2024, 2334
Tru9I TTAA 4 cut(s) 105, 1593, 2024, 2334
TscAI CASTG 4 cut(s) 1217, 1546, 1949, 2354
TseFI GTSAC 3 cut(s) 284, 1248, 1465
TseI GCWGC 3 cut(s) 790, 1535, 1661
Tsp45I GTSAC 3 cut(s) 284, 1248, 1465
TspDTI ATGAA 6 cut(s) 890, 993, 1380, 1763, 1890, 1932
TspGWI ACGGA 2 cut(s) 33, 506
TspRI CASTG 4 cut(s) 1217, 1546, 1949, 2354
VneI GTGCAC 2 cut(s) 1050, 2099
VpaK11BI GGWCC 2 cut(s) 375, 845
XagI CCTNNNNNAGG 1 cut(s) 945
XapI RAATTY 7 cut(s) 733, 784, 897, 1190, 1406, 1837, 2325
XceI RCATGY 2 cut(s) 1096, 1327
XcmI CCANNNNNNNNNTGG 3 cut(s) 1190, 1193, 2080
XhoI CTCGAG 1 cut(s) 2056
XmiI GTMKAC 1 cut(s) 2133
XspI CTAG 5 cut(s) 522, 942, 1505, 1799, 1886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.