Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004846

Physical Location & Seq

Genomic Coordinates Reverse (-)

3045112 .. 3047567

Gene Structure 2456 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00160010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGATTTCAACTAAATCCATGGGTGCATCTGATAATTACTCATTTGGGTTGCTTTTGTTATTGGCAGTAATACTGTCATCTCCATTGTCATCTTCATCATCTACATCTAGTAATCTGAGAATAGGTTCATCTCTCTCGGTGGAACATCTGTCCGATACTCTGCTGTCACCAAATGGTGCATTCTCTGCCGGATTTTTCCCCGTAGGAGAAAATGCATATTGCTTTGCCATCTGGTTTACCGAGCCAACAACACCAGCTCCCAACCTCACCGTGCCACTAACAAGGAACACCAGGCTCGTATCTTCTAGAAGCCTCACCAACTCCTCCTCCGGCTTCTACAAGCTCTTTTTCGATAATGACAACACCCTCCGGCTTCTCTACGATGGCCCCGAAGTTTCGAGTATTTACTGGCCTGACCCTTGGCTTCTAAGTTACCAAGCTGAGAGGTCCTCGTATAACAACAGTAGAATCGCAATGTTCGATGCATTAGGGCACCTCAGTGCATCCGACGACTATACCGTTTTGTCCTCGGATTACCGTGCCAAGGTGCAGAGAATTGTGAAGGTGGATGTGGATGGTAACGTCCGAATGTACAGTCGAAAGAAGCCGGGAGAGACCTGGGGTGTTACGTGGCAAGCCATTTCGCAACCATGCAAAATTCATGGGCTCTGTGGAGCCAATAGTTGGTGTACCTATAATCCTAGTATGGGTAGGAAATGCTCCTGCCTACCGGGATATAAGGTGGTAAATAAAGATGATTGGTCTTATGGGTGTGAACCAGATTTCAATCGGTCTTGTGATGCTCCCGGTGATGATCGAGGTGGGTTTGTGCATCTCCCTCGAGTTGAAATGTATGGGTTTGATTTTGGGATCTATTATAATACCAACTTACAAGTGTGCAAGACTATTTGCTTGGGATTATGCAACTGTACAGGCTTCCACCACAAATATGACTGGGCTAATCAATTTTACAATTGTTATCCCAAGTCCCAATTGAGAAATGGATTCCGTTCGCCCAATTTTGATGGTGACTTGTACCTCAAGCTACCCAAATCCAAATCCACACTTTCTTCAGATGATGTCCGTGGTGATAATGAATCCACTAGTAATAACATGTGTACAGAGAAGGTCTCAAAACATCTGGACCGAACCTATGAGAAAGGAAATACAAATGGGTCTATCGAGTTTATGTTGAGATTCGCAGCGGGGCTTGGGGGAGTTGAGATTTTTTGCATCTTCCTTGTGTGGTTTTTTCTAAATACAACGAGGGAAAAGGAGCGAGAAGATTCAGATGATTTAATTATTCAAGGGTACATTCATGCTGCCACTGGATTTAGAAGATTCAGCTACTCCGACTTAAAAAAAGCCACAAGAGGTTTCAAAGAAGAAATTGGTAGAGGAGGAGGAGGAATTGTGTACAAGGGCACATTGTCCGATCAACGAGTTGCAGCAATCAAGCAATTGAACGTTGCTAACCAAGGAGAAGCAGAGTTCCTTGCAGAAGTGAGCCTTATCGATTTTGGGCTGTCCAAGCTATTAAATAGAGGTGAGCTTCGCAACTTCTCGAGGACTAGAGGAACTAGAGGTTACATGGCTCCAGAGTGGGTTCATAACATGCCCATCACTTCAAAAGTGGATGTTTATAGCTATGGCATTGTTGTCTTGGAAATGCTCACCGGCAAGATGATAACAGAAAGTGTTCAATTTTCATTAGAAGGAGGAGGGGAGACACAGAAAAAGTTGCTTCTTTCATGGGTTAAGGAGAAGATGGATATTGGAGCATCTGCAAATGAAGAGAACCAGATTAGAACAGCTGAAGATGCCCCCAAGCTGGAACTTCTTGCTAAAGTGGCTCTTCAATGTTTAGAGGAAGACAAAGATGCTAGACCCACCATGAGTCAAGTTGTTGAGATGCTTGTACATCATGAAACTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

645

Amino Acids

72.05

Weight (kDa)

6.31

Isoelectric Point (pI)

34.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
S_locus_glycop	PF00954	179 - 248	1.2e-07	S-locus glycoprotein domain
Pkinase	PF00069	501 - 637	9.4e-19	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	502 - 639	2.3e-12	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004846)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g33830 FvH4_2g33840 FvH4_2g33850
malus_domestica	MD15G1076500.v1.1
prunus_persica	Prupe.1G429800_v2.0.a1 Prupe.1G429900_v2.0.a1
pyrus_communis	pycom08g07440
rosa_chinensis	RchiOBHm_Chr6g0308701 RchiOBHm_Chr6g0308721
rosa_laevigata	RLG00000010627 RLG00000010628
rosa_multiflora	Rmu_co8093658.1_g000001 Rmu_sc0000871.1_g000016 Rmu_sc0000871.1_g000018 Rmu_sc0017014.1_g000001 Rmu_sc0017015.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160000 Rroxscaffold_7G00160010
rosa_rugosa	Rorug06G0367800
rosa_samantha	Rh6AG478400 Rh6AG478800 Rh6BG488300 Rh6BG488400 Rh6CG492900 Rh6CG493200 Rh6CG493400 Rh6CG493600 Rh6CG493700 Rh6DG479200 Rh6DG479300
rosa_wichuraiana	Rw6G041720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	879
AccB1I	GGYRCC	1 cut(s)	492
AccB7I	CCANNNNNTGG	1 cut(s)	684
AciI	CCGC	1 cut(s)	1205
AclI	AACGTT	1 cut(s)	1467
AclWI	GGATC	1 cut(s)	878
AcsI	RAATTY	1 cut(s)	657
AcuI	CTGAAG	2 cut(s)	1056, 1836
AfaI	GTAC	8 cut(s)	593, 691, 931, 1037, 1120, 1313, 1418, 1920
AfiI	CCNNNNNNNGG	4 cut(s)	544, 684, 707, 1831
AflIII	ACRYGT	1 cut(s)	1113
AgsI	TTSAA	9 cut(s)	9, 787, 848, 1307, 1381, 1465, 1629, 1703, 1859
AhlI	ACTAGT	2 cut(s)	1103, 1931
AjnI	CCWGG	2 cut(s)	290, 617
AleI	CACNNNNGTG	1 cut(s)	498
Alw26I	GTCTC	3 cut(s)	608, 1135, 1721
AlwI	GGATC	1 cut(s)	878
Ama87I	CYCGRG	2 cut(s)	840, 1564
AoxI	GGCC	2 cut(s)	385, 410
ApeKI	GCWGC	3 cut(s)	1202, 1322, 1448
ApoI	RAATTY	1 cut(s)	657
ArsI	GACNNNNNNTTYG	2 cut(s)	580, 612
Asp700I	GAANNNNTTC	2 cut(s)	124, 1698
AspS9I	GGNCC	3 cut(s)	386, 447, 1144
AsuC2I	CCSGG	3 cut(s)	609, 732, 807
AsuHPI	GGTGA	8 cut(s)	159, 259, 307, 821, 1040, 1100, 1559, 1666
AvaI	CYCGRG	2 cut(s)	840, 1564
AvaII	GGWCC	2 cut(s)	447, 1144
BaeGI	GKGCMC	2 cut(s)	495, 1427
BanI	GGYRCC	1 cut(s)	492
BanII	GRGCYC	1 cut(s)	669
BbsI	GAAGAC	1 cut(s)	1878
BbvI	GCAGC	3 cut(s)	1214, 1309, 1460
BccI	CCATC	6 cut(s)	236, 377, 569, 1019, 1628, 1762
BcgI	CGANNNNNNTGC	2 cut(s)	821, 855
BciT130I	CCWGG	2 cut(s)	292, 619
BcnI	CCSGG	3 cut(s)	609, 732, 807
BcoDI	GTCTC	3 cut(s)	608, 1135, 1721
BcuI	ACTAGT	2 cut(s)	1103, 1931
BfaI	CTAG	8 cut(s)	108, 306, 702, 1104, 1572, 1581, 1884, 1932
BisI	GCNGC	3 cut(s)	1203, 1323, 1449
BlsI	GCNGC	3 cut(s)	1204, 1324, 1450
Bme1390I	CCNGG	5 cut(s)	292, 609, 619, 732, 807
Bme18I	GGWCC	2 cut(s)	447, 1144
BmeT110I	CYCGRG	2 cut(s)	840, 1564
BmgT120I	GGNCC	3 cut(s)	386, 447, 1144
BmiI	GGNNCC	4 cut(s)	388, 494, 676, 1596
BmrFI	CCNGG	5 cut(s)	292, 609, 619, 732, 807
BmrI	ACTGGG	1 cut(s)	964
BmuI	ACTGGG	1 cut(s)	964
BpiI	GAAGAC	1 cut(s)	1878
BplI	GAGNNNNNCTC	4 cut(s)	434, 466, 1115, 1147
BpmI	CTGGAG	1 cut(s)	1581
BpuEI	CTTGAG	1 cut(s)	1025
BpuMI	CCSGG	3 cut(s)	609, 732, 807
Bsa29I	ATCGAT	1 cut(s)	1515
BsaAI	YACGTR	1 cut(s)	630
BsaBI	GATNNNNATC	1 cut(s)	786
BsaI	GGTCTC	2 cut(s)	608, 1135
BsaJI	CCNNGG	7 cut(s)	18, 419, 528, 543, 618, 1084, 1477
BsaXI	ACNNNNNCTCC	6 cut(s)	241, 271, 311, 341, 1398, 1428
Bsc4I	CCNNNNNNNGG	4 cut(s)	544, 684, 707, 1831
Bse118I	RCCGGY	1 cut(s)	1676
Bse1I	ACTGG	3 cut(s)	413, 959, 1333
Bse3DI	GCAATG	1 cut(s)	480
Bse8I	GATNNNNATC	1 cut(s)	786
BseBI	CCWGG	2 cut(s)	292, 619
BseCI	ATCGAT	1 cut(s)	1515
BseDI	CCNNGG	7 cut(s)	18, 419, 528, 543, 618, 1084, 1477
BseGI	GGATG	4 cut(s)	503, 574, 580, 1642
BseJI	GATNNNNATC	1 cut(s)	786
BseLI	CCNNNNNNNGG	4 cut(s)	544, 684, 707, 1831
BseMI	GCAATG	1 cut(s)	480
BseMII	CTCAG	3 cut(s)	107, 432, 511
BseNI	ACTGG	3 cut(s)	413, 959, 1333
BseRI	GAGGAG	6 cut(s)	313, 316, 1413, 1416, 1419, 1734
BseSI	GKGCMC	2 cut(s)	495, 1427
BseXI	GCAGC	3 cut(s)	1214, 1309, 1460
BsgI	GTGCAG	1 cut(s)	569
BshFI	GGCC	2 cut(s)	387, 412
BshNI	GGYRCC	1 cut(s)	492
BshVI	ATCGAT	1 cut(s)	1515
BsiHKCI	CYCGRG	2 cut(s)	840, 1564
BsiSI	CCGG	7 cut(s)	189, 330, 370, 608, 731, 807, 1677
BslFI	GGGAC	1 cut(s)	973
BslI	CCNNNNNNNGG	4 cut(s)	544, 684, 707, 1831
BsmAI	GTCTC	3 cut(s)	608, 1135, 1721
BsmFI	GGGAC	1 cut(s)	973
BsmI	GAATGC	1 cut(s)	179
BsnI	GGCC	2 cut(s)	387, 412
Bso31I	GGTCTC	2 cut(s)	608, 1135
BsoBI	CYCGRG	2 cut(s)	840, 1564
Bsp1286I	GDGCHC	3 cut(s)	495, 669, 1427
Bsp1407I	TGTACA	5 cut(s)	591, 929, 1118, 1416, 1918
Bsp143I	GATC	3 cut(s)	814, 870, 1435
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	1 cut(s)	1205
BspANI	GGCC	2 cut(s)	387, 412
BspCNI	CTCAG	3 cut(s)	108, 433, 510
BspDI	ATCGAT	1 cut(s)	1515
BspHI	TCATGA	1 cut(s)	1924
BspLI	GGNNCC	4 cut(s)	388, 494, 676, 1596
BspPI	GGATC	1 cut(s)	878
BspQI	GCTCTTC	1 cut(s)	1860
BspT107I	GGYRCC	1 cut(s)	492
BspTNI	GGTCTC	2 cut(s)	608, 1135
BsrDI	GCAATG	1 cut(s)	480
BsrFI	RCCGGY	1 cut(s)	1676
BsrGI	TGTACA	5 cut(s)	591, 929, 1118, 1416, 1918
BsrI	ACTGG	3 cut(s)	413, 959, 1333
BssAI	RCCGGY	1 cut(s)	1676
BssECI	CCNNGG	7 cut(s)	18, 419, 528, 543, 618, 1084, 1477
BssMI	GATC	3 cut(s)	814, 870, 1435
BssT1I	CCWWGG	4 cut(s)	18, 419, 543, 1477
Bst2UI	CCWGG	2 cut(s)	292, 619
Bst4CI	ACNGT	7 cut(s)	75, 271, 464, 520, 539, 596, 929
Bst6I	CTCTTC	2 cut(s)	1788, 1860
BstAPI	GCANNNNNTGC	1 cut(s)	185
BstAUI	TGTACA	5 cut(s)	591, 929, 1118, 1416, 1918
BstBAI	YACGTR	1 cut(s)	630
BstC8I	GCNNGC	1 cut(s)	636
BstDEI	CTNAG	4 cut(s)	116, 428, 441, 497
BstDSI	CCRYGG	2 cut(s)	18, 1084
BstF5I	GGATG	4 cut(s)	503, 574, 580, 1642
BstKTI	GATC	3 cut(s)	817, 873, 1438
BstMAI	GTCTC	3 cut(s)	608, 1135, 1721
BstMBI	GATC	3 cut(s)	814, 870, 1435
BstMWI	GCNNNNNNNGC	4 cut(s)	185, 1531, 1820, 1850
BstNI	CCWGG	2 cut(s)	292, 619
BstNSI	RCATGY	2 cut(s)	1117, 1618
BstSCI	CCNGG	5 cut(s)	290, 607, 617, 730, 805
BstSLI	GKGCMC	2 cut(s)	495, 1427
BstV1I	GCAGC	3 cut(s)	1214, 1309, 1460
BstV2I	GAAGAC	1 cut(s)	1878
BstX2I	RGATCY	1 cut(s)	870
BstYI	RGATCY	1 cut(s)	870
Bsu15I	ATCGAT	1 cut(s)	1515
BsuRI	GGCC	2 cut(s)	387, 412
BsuTUI	ATCGAT	1 cut(s)	1515
BtgI	CCRYGG	2 cut(s)	18, 1084
BtsCI	GGATG	4 cut(s)	503, 574, 580, 1642
BtsIMutI	CAGTG	2 cut(s)	505, 1326
Cac8I	GCNNGC	1 cut(s)	636
CciI	TCATGA	1 cut(s)	1924
Cfr10I	RCCGGY	1 cut(s)	1676
Cfr13I	GGNCC	3 cut(s)	386, 447, 1144
ClaI	ATCGAT	1 cut(s)	1515
Csp6I	GTAC	8 cut(s)	592, 690, 930, 1036, 1119, 1312, 1417, 1919
CviQI	GTAC	8 cut(s)	592, 690, 930, 1036, 1119, 1312, 1417, 1919
DdeI	CTNAG	4 cut(s)	116, 428, 441, 497
DpnI	GATC	3 cut(s)	816, 872, 1437
DpnII	GATC	3 cut(s)	814, 870, 1435
Eam1104I	CTCTTC	2 cut(s)	1788, 1860
EarI	CTCTTC	2 cut(s)	1788, 1860
Eco130I	CCWWGG	4 cut(s)	18, 419, 543, 1477
Eco24I	GRGCYC	1 cut(s)	669
Eco31I	GGTCTC	2 cut(s)	608, 1135
Eco47I	GGWCC	2 cut(s)	447, 1144
Eco57I	CTGAAG	2 cut(s)	1056, 1836
Eco88I	CYCGRG	2 cut(s)	840, 1564
EcoO109I	RGGNCCY	1 cut(s)	447
EcoRII	CCWGG	2 cut(s)	290, 617
EcoT14I	CCWWGG	4 cut(s)	18, 419, 543, 1477
EcoT22I	ATGCAT	2 cut(s)	217, 487
EcoT38I	GRGCYC	1 cut(s)	669
ErhI	CCWWGG	4 cut(s)	18, 419, 543, 1477
FalI	AAGNNNNNCTT	4 cut(s)	1494, 1526, 1839, 1871
FaqI	GGGAC	1 cut(s)	973
FauI	CCCGC	1 cut(s)	1198
Fnu4HI	GCNGC	3 cut(s)	1203, 1323, 1449
FokI	GGATG	4 cut(s)	490, 581, 587, 1649
FriOI	GRGCYC	1 cut(s)	669
Fsp4HI	GCNGC	3 cut(s)	1203, 1323, 1449
FspBI	CTAG	8 cut(s)	108, 306, 702, 1104, 1572, 1581, 1884, 1932
GluI	GCNGC	3 cut(s)	1203, 1323, 1449
GsuI	CTGGAG	1 cut(s)	1581
HaeIII	GGCC	2 cut(s)	387, 412
HapII	CCGG	7 cut(s)	189, 330, 370, 608, 731, 807, 1677
HinfI	GANTC	7 cut(s)	468, 1005, 1097, 1197, 1286, 1341, 1897
HpaII	CCGG	7 cut(s)	189, 330, 370, 608, 731, 807, 1677
HphI	GGTGA	8 cut(s)	159, 259, 307, 821, 1040, 1100, 1559, 1666
Hpy166II	GTNNAC	5 cut(s)	237, 690, 776, 1119, 1417
Hpy188III	TCNNGA	5 cut(s)	306, 1142, 1564, 1598, 1925
Hpy8I	GTNNAC	5 cut(s)	237, 690, 776, 1119, 1417
Hpy99I	CGWCG	1 cut(s)	512
HpyAV	CCTTC	3 cut(s)	556, 1120, 1709
HpyCH4III	ACNGT	7 cut(s)	75, 271, 464, 520, 539, 596, 929
HpyCH4IV	ACGT	3 cut(s)	582, 629, 1467
HpyF10VI	GCNNNNNNNGC	4 cut(s)	185, 1531, 1820, 1850
HpyF3I	CTNAG	4 cut(s)	116, 428, 441, 497
HpySE526I	ACGT	3 cut(s)	582, 629, 1467
Kzo9I	GATC	3 cut(s)	814, 870, 1435
LguI	GCTCTTC	1 cut(s)	1860
LmnI	GCTCC	7 cut(s)	262, 674, 725, 808, 1276, 1600, 1778
Lsp1109I	GCAGC	3 cut(s)	1214, 1309, 1460
MaeI	CTAG	8 cut(s)	108, 306, 702, 1104, 1572, 1581, 1884, 1932
MaeII	ACGT	3 cut(s)	582, 629, 1467
MaeIII	GTNAC	6 cut(s)	165, 431, 578, 625, 1028, 1586
MalI	GATC	3 cut(s)	816, 872, 1437
MboI	GATC	3 cut(s)	814, 870, 1435
MfeI	CAATTG	3 cut(s)	973, 992, 1460
MflI	RGATCY	1 cut(s)	870
MhlI	GDGCHC	3 cut(s)	495, 669, 1427
MlyI	GAGTC	1 cut(s)	1906
MmeI	TCCRAC	2 cut(s)	531, 1377
Mph1103I	ATGCAT	2 cut(s)	217, 487
MroXI	GAANNNNTTC	2 cut(s)	124, 1698
MseI	TTAA	5 cut(s)	1298, 1358, 1538, 1758, 1936
MslI	CAYNNNNRTG	2 cut(s)	498, 948
MspA1I	CMGCKG	2 cut(s)	1205, 1814
MspI	CCGG	7 cut(s)	189, 330, 370, 608, 731, 807, 1677
MspR9I	CCNGG	5 cut(s)	292, 609, 619, 732, 807
MunI	CAATTG	3 cut(s)	973, 992, 1460
Mva1269I	GAATGC	1 cut(s)	179
MvaI	CCWGG	2 cut(s)	292, 619
MwoI	GCNNNNNNNGC	4 cut(s)	185, 1531, 1820, 1850
NciI	CCSGG	3 cut(s)	609, 732, 807
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	3 cut(s)	814, 870, 1435
NlaIV	GGNNCC	4 cut(s)	388, 494, 676, 1596
NmuCI	GTSAC	2 cut(s)	165, 1028
NsiI	ATGCAT	2 cut(s)	217, 487
NspI	RCATGY	2 cut(s)	1117, 1618
OliI	CACNNNNGTG	1 cut(s)	498
PaeR7I	CTCGAG	2 cut(s)	840, 1564
PagI	TCATGA	1 cut(s)	1924
PciI	ACATGT	1 cut(s)	1113
PciSI	GCTCTTC	1 cut(s)	1860
PcsI	WCGNNNNNNNCGW	3 cut(s)	387, 477, 516
PctI	GAATGC	1 cut(s)	179
PdmI	GAANNNNTTC	2 cut(s)	124, 1698
PfeI	GAWTC	6 cut(s)	468, 1005, 1097, 1197, 1286, 1341
PflMI	CCANNNNNTGG	1 cut(s)	684
PkrI	GCNGC	3 cut(s)	1204, 1324, 1450
PleI	GAGTC	1 cut(s)	1905
PpsI	GAGTC	1 cut(s)	1905
Ppu21I	YACGTR	1 cut(s)	630
PpuMI	RGGWCCY	1 cut(s)	447
PscI	ACATGT	1 cut(s)	1113
PsiI	TTATAA	1 cut(s)	879
Psp1406I	AACGTT	1 cut(s)	1467
Psp5II	RGGWCCY	1 cut(s)	447
Psp6I	CCWGG	2 cut(s)	290, 617
PspGI	CCWGG	2 cut(s)	290, 617
PspN4I	GGNNCC	4 cut(s)	388, 494, 676, 1596
PspPI	GGNCC	3 cut(s)	386, 447, 1144
PspPPI	RGGWCCY	1 cut(s)	447
PspXI	VCTCGAGB	1 cut(s)	840
PsuI	RGATCY	1 cut(s)	870
PvuII	CAGCTG	1 cut(s)	1814
RsaI	GTAC	8 cut(s)	593, 691, 931, 1037, 1120, 1313, 1418, 1920
RsaNI	GTAC	8 cut(s)	592, 690, 930, 1036, 1119, 1312, 1417, 1919
RseI	CAYNNNNRTG	2 cut(s)	498, 948
SapI	GCTCTTC	1 cut(s)	1860
SaqAI	TTAA	5 cut(s)	1298, 1358, 1538, 1758, 1936
SatI	GCNGC	3 cut(s)	1203, 1323, 1449
Sau3AI	GATC	3 cut(s)	814, 870, 1435
Sau96I	GGNCC	3 cut(s)	386, 447, 1144
SchI	GAGTC	1 cut(s)	1906
ScrFI	CCNGG	5 cut(s)	292, 609, 619, 732, 807
SduI	GDGCHC	3 cut(s)	495, 669, 1427
Sfr274I	CTCGAG	2 cut(s)	840, 1564
SinI	GGWCC	2 cut(s)	447, 1144
SlaI	CTCGAG	2 cut(s)	840, 1564
SmiMI	CAYNNNNRTG	2 cut(s)	498, 948
SmlI	CTYRAG	3 cut(s)	840, 1040, 1564
SmoI	CTYRAG	3 cut(s)	840, 1040, 1564
SpeI	ACTAGT	2 cut(s)	1103, 1931
SsiI	CCGC	1 cut(s)	1205
SspMI	CTAG	8 cut(s)	108, 306, 702, 1104, 1572, 1581, 1884, 1932
StyD4I	CCNGG	5 cut(s)	290, 607, 617, 730, 805
StyI	CCWWGG	4 cut(s)	18, 419, 543, 1477
TaaI	ACNGT	7 cut(s)	75, 271, 464, 520, 539, 596, 929
TaiI	ACGT	3 cut(s)	585, 632, 1470
TaqI	TCGA	9 cut(s)	351, 398, 480, 598, 817, 841, 1182, 1515, 1565
TaqII	GACCGA	2 cut(s)	780, 1161
TatI	WGTACW	5 cut(s)	591, 929, 1118, 1416, 1918
TfiI	GAWTC	6 cut(s)	468, 1005, 1097, 1197, 1286, 1341
Tru1I	TTAA	5 cut(s)	1298, 1358, 1538, 1758, 1936
Tru9I	TTAA	5 cut(s)	1298, 1358, 1538, 1758, 1936
TscAI	CASTG	2 cut(s)	505, 1333
TseFI	GTSAC	2 cut(s)	165, 1028
TseI	GCWGC	3 cut(s)	1202, 1322, 1448
Tsp45I	GTSAC	2 cut(s)	165, 1028
TspDTI	ATGAA	9 cut(s)	84, 117, 650, 1110, 1307, 1598, 1698, 1740, 1806
TspGWI	ACGGA	2 cut(s)	998, 1073
TspRI	CASTG	2 cut(s)	505, 1333
Van91I	CCANNNNNTGG	1 cut(s)	684
VpaK11BI	GGWCC	2 cut(s)	447, 1144
XapI	RAATTY	1 cut(s)	657
XbaI	TCTAGA	1 cut(s)	305
XceI	RCATGY	2 cut(s)	1117, 1618
XcmI	CCANNNNNNNNNTGG	1 cut(s)	998
XhoI	CTCGAG	2 cut(s)	840, 1564
XmnI	GAANNNNTTC	2 cut(s)	124, 1698
XspI	CTAG	8 cut(s)	108, 306, 702, 1104, 1572, 1581, 1884, 1932
Zsp2I	ATGCAT	2 cut(s)	217, 487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.