Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0004846

Physical Location & Seq

Genomic Coordinates Forward (+)

69222058 .. 69229913

Gene Structure 7856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG488300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGGATCCTTTCTTTCAGTAGAAGATCCATCTCAAACTTTGATGTCTCCGGACGCAGTATTTACAGCTGGCCTTTTTCCGGTCGGTGAAAATGCGTTTTGCTTCGGAATATGGTTCTCGGAGCCATCAACCAGTACTCTCAACCTCACCGTGGTGTGGATAGCAAATCGTGACGAGCCGGTCAACGGTCAACGCTCCAAGCTCACCCTGCACAGAAGTGGAAACCTTATTCTATCCGACATCAACAGATACACCGTGTGGTCCTCCAATACAGCTTCAAACTCGTCGGCCCACTTGCACCTCAGAAACACAGGCAATCTTGTACTGCTCGCTGCGCATGGCGTCGTATTGTGGGAAAGCTTTGCTTCGCCAACGGACACACTTTTACCTCAGCAAGCGCTCACTAGAAACACACAGCTCATTTCTTCAAGAAGCCTCACCAACTATTCCTCCGGCTTCTACTCTCTTTACTTCGACGACGACAACACTCTTCGTATGTTCTACAACGCCCCCAAGGTTTCGAGCATTTACTGGCCCGATCCATGGCTTCTGAGTCGGCAAGTAGGAAGATCCGCATTCAACAATAGTCGAATTGCAACTTTTGACAACTTGGGAAGTTTTACTGCATCTGATAATTTTATCGTTTGGACAATCGACTACGGCACAAAATTGCAGCGAATATTCAGGATAGATGTAGATGGTAATCTCCGAGGTTACAGTCGAAAAGGTCCTGGAGATAAATGGATTGTTACATGGGAAGCATTTCTACAACCATGTAAAATTCATGGCATTTGCGGAGCTAATAGCTATTGCAGCTATATTCCTAATACAGGTAGGAAATGCTCATGCCTACCGGGTTATGAAATGATCAGTAAAACCGACTGGTCTTATGGGTGTAAACCGGCTGGTTTCAATCTGTCCTGCAAGAGTAGTGCAGAGGAGGAGTTTGGTTTTGTGCATCTTTCACGTATTGAGATGTATGGGTATGATTATGACGTCACTGGCAATTACACGTTTGATGAGTGCAAAAGTTTGTGCCTGGACTTGTGCGACTGTACTGGATTCCTGCACATATTTGGGGGTCGTCGGTATCTGTGTTATCCCAAGGTGCAATTTCGAAATGGGTACCGGTCACCTGCTTTTGGTGGGGAGCTGTATGTGAAGGTACCAAAACGCCTCTTCAATGCTACCTATAGAGATACCAACATGTGCTCAGCTAAACTTCCAGCACAGCTTGACAGAACATATGAAAGAAGCATGCCCAATGGATCAATTGAGTTTATGCTGAAATTTGCATCTGTCTTGGGAGGAATAGAGGTCATTTGCATCTTTGTTGTGTGGTTTTTTGTGACAAGAAGAAGCTGTGGAGATAAAAAAGATTCAGAATTAGAACTACTTGCTCAAGGATACCTTCAAGCTGCCAGTGGATTCAGAAGGTTTACATACTCCGAGTTGAAGAGGGCCACAAAAGGTTTCAAAGAAGAGATTGGCAGAGGAGGAGGAGGAGTTGTGTACAAAGGCATATTGTCTGATCAACGAGTTGCAGCGATCAAGCAACTGAATGATTGCAAACAAGGGGGTGAAGCGGAGTTCCTTGCAGAAGTCAGCCTTATTGGCGACAATGCATATTGCTTTGCCATCTGGTTTACCGAGCCAACAACACCAACTCCCAACCTCACCGTGGTATGGATGGCCAACCGTGACCAGCTGGTCAACGGTCACCGCTCCAAGCTCTCCCTCCAGAGAAACGGCAACCTTATTCTCACCGATGCTGGCAAATCCACCGTTTGGTCCTCCAACACCGTCTCAAATTCATTAGTCCAATTGCTCCTCCACGACACTGGCAAACTTGTCCTGCTCGCCGGTGACTGTGTCGTTTTATGGGAAAGCTTTGCTTCGCCAACGAACACTCTTTTGCCTTATCAGCCACTAACAAGGAACAGCAAGCTCGTATCTTCTAGAATCCTCACCAACTCCTCCTCCGGCTTCTACAAGCTCTTTTTCGATAATGACGACACCCTCCGGCTTCTCTACGATGGCCCCGAAGTTTCGAGTATTTACTGGCCTGACCCTTGGCTTCTAAATTACCAAGCTGAGAGGTCCTCGTACAACAACAGTAGAATCGCAATGTTCGATGCATTAGGGCACCTCAGTGCATCCGACGACTTTACCGTTTTGTCCTCGGATTACGGTGCCAAGGTGCAGAGAATTGTGAAGGTGGATGTGGATGGTAACATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

746

Amino Acids

83.5

Weight (kDa)

7.43

Isoelectric Point (pI)

39.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	50 - 147	2.3e-24	D-mannose binding lectin
S_locus_glycop	PF00954	208 - 288	5.7e-07	S-locus glycoprotein domain
B_lectin	PF01453	560 - 657	1.2e-19	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004846)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g33830 FvH4_2g33840 FvH4_2g33850
malus_domestica	MD15G1076500.v1.1
prunus_persica	Prupe.1G429800_v2.0.a1 Prupe.1G429900_v2.0.a1
pyrus_communis	pycom08g07440
rosa_chinensis	RchiOBHm_Chr6g0308701 RchiOBHm_Chr6g0308721
rosa_laevigata	RLG00000010627 RLG00000010628
rosa_multiflora	Rmu_co8093658.1_g000001 Rmu_sc0000871.1_g000016 Rmu_sc0000871.1_g000018 Rmu_sc0017014.1_g000001 Rmu_sc0017015.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160000 Rroxscaffold_7G00160010
rosa_rugosa	Rorug06G0367800
rosa_samantha	Rh6AG478400 Rh6AG478800 Rh6BG488300 Rh6BG488400 Rh6CG492900 Rh6CG493200 Rh6CG493400 Rh6CG493600 Rh6CG493700 Rh6DG479200 Rh6DG479300
rosa_wichuraiana	Rw6G041720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1144
AasI	GACNNNNNNGTC	2 cut(s)	179, 1709
AatII	GACGTC	1 cut(s)	999
Acc16I	TGCGCA	1 cut(s)	336
Acc36I	ACCTGC	1 cut(s)	1144
Acc65I	GGTACC	2 cut(s)	1125, 1165
AccB1I	GGYRCC	4 cut(s)	1125, 1165, 2145, 2192
AccB7I	CCANNNNNTGG	1 cut(s)	1788
AccBSI	CCGCTC	1 cut(s)	1725
AccIII	TCCGGA	1 cut(s)	49
AciI	CCGC	4 cut(s)	573, 795, 1586, 1723
AclWI	GGATC	5 cut(s)	13, 20, 533, 564, 1276
AcoI	YGGCCR	1 cut(s)	1692
AcsI	RAATTY	3 cut(s)	780, 1289, 1810
AcyI	GRCGYC	2 cut(s)	342, 996
AdeI	CACNNNGTG	1 cut(s)	258
AfaI	GTAC	7 cut(s)	136, 324, 1057, 1127, 1167, 1514, 2108
AfeI	AGCGCT	1 cut(s)	399
AflIII	ACRYGT	2 cut(s)	1011, 1206
AgeI	ACCGGT	1 cut(s)	1128
AgsI	TTSAA	8 cut(s)	279, 429, 580, 913, 1183, 1415, 1456, 1477
AjnI	CCWGG	2 cut(s)	730, 1038
AleI	CACNNNNGTG	3 cut(s)	152, 216, 2151
Alw21I	GWGCWC	1 cut(s)	1214
Alw26I	GTCTC	2 cut(s)	51, 1810
AlwI	GGATC	5 cut(s)	13, 20, 533, 564, 1276
Aor13HI	TCCGGA	1 cut(s)	49
Aor51HI	AGCGCT	1 cut(s)	399
AoxI	GGCC	7 cut(s)	70, 288, 533, 1461, 1692, 2038, 2063
ApeKI	GCWGC	5 cut(s)	332, 673, 813, 1418, 1544
ApoI	RAATTY	3 cut(s)	780, 1289, 1810
AsiGI	ACCGGT	1 cut(s)	1128
Asp700I	GAANNNNTTC	1 cut(s)	762
Asp718I	GGTACC	2 cut(s)	1125, 1165
AspLEI	GCGC	2 cut(s)	337, 400
AspS9I	GGNCC	8 cut(s)	261, 289, 534, 728, 1461, 1791, 2039, 2100
AsuC2I	CCSGG	1 cut(s)	855
AsuII	TTCGAA	1 cut(s)	1117
AvaII	GGWCC	4 cut(s)	261, 728, 1791, 2100
BaeGI	GKGCMC	1 cut(s)	2148
BalI	TGGCCA	1 cut(s)	1694
BamHI	GGATCC	1 cut(s)	5
BanI	GGYRCC	4 cut(s)	1125, 1165, 2145, 2192
BarI	GAAGNNNNNNTAC	2 cut(s)	750, 782
Bbv12I	GWGCWC	1 cut(s)	1214
BbvCI	CCTCAGC	1 cut(s)	390
BbvI	GCAGC	5 cut(s)	319, 685, 825, 1405, 1556
BccI	CCATC	7 cut(s)	37, 133, 692, 1646, 1684, 2030, 2222
BceAI	ACGGC	2 cut(s)	676, 1765
BciT130I	CCWGG	2 cut(s)	732, 1040
BciVI	GTATCC	1 cut(s)	1400
BclI	TGATCA	2 cut(s)	867, 1531
BcnI	CCSGG	1 cut(s)	855
BcoDI	GTCTC	2 cut(s)	51, 1810
BfaI	CTAG	2 cut(s)	405, 1959
BfmI	CTRYAG	1 cut(s)	1192
BfoI	RGCGCY	1 cut(s)	401
BfuAI	ACCTGC	1 cut(s)	1144
BfuI	GTATCC	1 cut(s)	1400
BglI	GCCNNNNNGGC	1 cut(s)	1614
BisI	GCNGC	5 cut(s)	333, 674, 814, 1419, 1545
BlpI	GCTNAGC	1 cut(s)	1213
BlsI	GCNGC	5 cut(s)	334, 675, 815, 1420, 1546
BmcAI	AGTACT	1 cut(s)	136
Bme1390I	CCNGG	3 cut(s)	732, 855, 1040
Bme18I	GGWCC	4 cut(s)	261, 728, 1791, 2100
BmgT120I	GGNCC	8 cut(s)	261, 289, 534, 728, 1461, 1791, 2039, 2100
BmiI	GGNNCC	7 cut(s)	7, 123, 1127, 1167, 2041, 2147, 2194
BmrFI	CCNGG	3 cut(s)	732, 855, 1040
BmsI	GCATC	7 cut(s)	635, 967, 1304, 1335, 1759, 2125, 2165
BplI	GAGNNNNNCTC	2 cut(s)	2087, 2119
BpmI	CTGGAG	2 cut(s)	753, 1724
Bpu10I	CCTNAGC	1 cut(s)	390
Bpu1102I	GCTNAGC	1 cut(s)	1213
Bpu14I	TTCGAA	1 cut(s)	1117
BpuEI	CTTGAG	1 cut(s)	1386
BpuMI	CCSGG	1 cut(s)	855
BsaAI	YACGTR	1 cut(s)	968
BsaBI	GATNNNNATC	1 cut(s)	702
BsaHI	GRCGYC	2 cut(s)	342, 996
BsaJI	CCNNGG	9 cut(s)	150, 513, 542, 709, 1104, 1680, 2072, 2181, 2196
BsaWI	WCCGGW	3 cut(s)	49, 79, 1128
Bse118I	RCCGGY	4 cut(s)	178, 901, 1128, 1862
Bse1I	ACTGG	8 cut(s)	132, 536, 887, 1006, 1063, 1422, 1846, 2066
Bse3DI	GCAATG	1 cut(s)	2133
Bse8I	GATNNNNATC	1 cut(s)	702
BseAI	TCCGGA	1 cut(s)	49
BseBI	CCWGG	2 cut(s)	732, 1040
BseDI	CCNNGG	9 cut(s)	150, 513, 542, 709, 1104, 1680, 2072, 2181, 2196
BseGI	GGATG	4 cut(s)	1695, 2156, 2227, 2233
BseJI	GATNNNNATC	1 cut(s)	702
BseMI	GCAATG	1 cut(s)	2133
BseMII	CTCAG	6 cut(s)	316, 404, 542, 1227, 2085, 2164
BseNI	ACTGG	8 cut(s)	132, 536, 887, 1006, 1063, 1422, 1846, 2066
BseRI	GAGGAG	9 cut(s)	953, 956, 1509, 1512, 1515, 1518, 1820, 1966, 1969
BseSI	GKGCMC	1 cut(s)	2148
BseXI	GCAGC	5 cut(s)	319, 685, 825, 1405, 1556
BsgI	GTGCAG	4 cut(s)	194, 954, 1052, 2222
Bsh1285I	CGRYCG	1 cut(s)	84
BshFI	GGCC	7 cut(s)	72, 290, 535, 1463, 1694, 2040, 2065
BshNI	GGYRCC	4 cut(s)	1125, 1165, 2145, 2192
BshTI	ACCGGT	1 cut(s)	1128
BsiEI	CGRYCG	1 cut(s)	84
BsiHKAI	GWGCWC	1 cut(s)	1214
BsmAI	GTCTC	2 cut(s)	51, 1810
BsmBI	CGTCTC	1 cut(s)	1810
BsmI	GAATGC	1 cut(s)	575
BsnI	GGCC	7 cut(s)	72, 290, 535, 1463, 1694, 2040, 2065
Bsp119I	TTCGAA	1 cut(s)	1117
Bsp1286I	GDGCHC	2 cut(s)	1214, 2148
Bsp13I	TCCGGA	1 cut(s)	49
Bsp1407I	TGTACA	1 cut(s)	1512
Bsp143I	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
Bsp1720I	GCTNAGC	1 cut(s)	1213
Bsp19I	CCATGG	1 cut(s)	542
BspACI	CCGC	4 cut(s)	573, 795, 1586, 1723
BspANI	GGCC	7 cut(s)	72, 290, 535, 1463, 1694, 2040, 2065
BspCNI	CTCAG	6 cut(s)	315, 403, 543, 1226, 2086, 2163
BspEI	TCCGGA	1 cut(s)	49
BspLI	GGNNCC	7 cut(s)	7, 123, 1127, 1167, 2041, 2147, 2194
BspMI	ACCTGC	1 cut(s)	1144
BspPI	GGATC	5 cut(s)	13, 20, 533, 564, 1276
BspT104I	TTCGAA	1 cut(s)	1117
BspT107I	GGYRCC	4 cut(s)	1125, 1165, 2145, 2192
BsrBI	CCGCTC	1 cut(s)	1725
BsrDI	GCAATG	1 cut(s)	2133
BsrFI	RCCGGY	4 cut(s)	178, 901, 1128, 1862
BsrGI	TGTACA	1 cut(s)	1512
BsrI	ACTGG	8 cut(s)	132, 536, 887, 1006, 1063, 1422, 1846, 2066
BssAI	RCCGGY	4 cut(s)	178, 901, 1128, 1862
BssECI	CCNNGG	9 cut(s)	150, 513, 542, 709, 1104, 1680, 2072, 2181, 2196
BssMI	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
BssNI	GRCGYC	2 cut(s)	342, 996
BssT1I	CCWWGG	5 cut(s)	513, 542, 1104, 2072, 2196
Bst2UI	CCWGG	2 cut(s)	732, 1040
Bst6I	CTCTTC	4 cut(s)	495, 1184, 1451, 1476
BstACI	GRCGYC	2 cut(s)	342, 996
BstAUI	TGTACA	1 cut(s)	1512
BstBAI	YACGTR	1 cut(s)	968
BstBI	TTCGAA	1 cut(s)	1117
BstC8I	GCNNGC	7 cut(s)	70, 330, 396, 1259, 1774, 1860, 1946
BstDEI	CTNAG	6 cut(s)	302, 390, 551, 1213, 2094, 2150
BstDSI	CCRYGG	3 cut(s)	150, 542, 1680
BstEII	GGTNACC	2 cut(s)	1131, 1718
BstENI	CCTNNNNNAGG	1 cut(s)	828
BstF5I	GGATG	4 cut(s)	1695, 2156, 2227, 2233
BstH2I	RGCGCY	1 cut(s)	401
BstHHI	GCGC	2 cut(s)	337, 400
BstKTI	GATC	8 cut(s)	8, 28, 541, 572, 870, 1271, 1534, 1551
BstMAI	GTCTC	2 cut(s)	51, 1810
BstMBI	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
BstMCI	CGRYCG	1 cut(s)	84
BstMWI	GCNNNNNNNGC	5 cut(s)	208, 334, 813, 1614, 1924
BstNI	CCWGG	2 cut(s)	732, 1040
BstNSI	RCATGY	2 cut(s)	1210, 1261
BstPI	GGTNACC	2 cut(s)	1131, 1718
BstSCI	CCNGG	3 cut(s)	730, 853, 1038
BstSFI	CTRYAG	1 cut(s)	1192
BstSLI	GKGCMC	1 cut(s)	2148
BstV1I	GCAGC	5 cut(s)	319, 685, 825, 1405, 1556
BstX2I	RGATCY	3 cut(s)	5, 25, 569
BstXI	CCANNNNNNTGG	1 cut(s)	1841
BstYI	RGATCY	3 cut(s)	5, 25, 569
BsuI	GTATCC	1 cut(s)	1400
BsuRI	GGCC	7 cut(s)	72, 290, 535, 1463, 1694, 2040, 2065
BtgI	CCRYGG	3 cut(s)	150, 542, 1680
BtsCI	GGATG	4 cut(s)	1695, 2156, 2227, 2233
BtsIMutI	CAGTG	4 cut(s)	999, 1429, 1839, 2158
BveI	ACCTGC	1 cut(s)	1144
Cac8I	GCNNGC	7 cut(s)	70, 330, 396, 1259, 1774, 1860, 1946
CfoI	GCGC	2 cut(s)	337, 400
Cfr10I	RCCGGY	4 cut(s)	178, 901, 1128, 1862
Cfr13I	GGNCC	8 cut(s)	261, 289, 534, 728, 1461, 1791, 2039, 2100
CseI	GACGC	2 cut(s)	62, 331
Csp6I	GTAC	7 cut(s)	135, 323, 1056, 1126, 1166, 1513, 2107
CspAI	ACCGGT	1 cut(s)	1128
CviAII	CATG	8 cut(s)	338, 543, 753, 774, 785, 846, 1207, 1258
CviQI	GTAC	7 cut(s)	135, 323, 1056, 1126, 1166, 1513, 2107
DdeI	CTNAG	6 cut(s)	302, 390, 551, 1213, 2094, 2150
DpnI	GATC	8 cut(s)	7, 27, 540, 571, 869, 1270, 1533, 1550
DpnII	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
DraIII	CACNNNGTG	1 cut(s)	258
DrdI	GACNNNNNNGTC	2 cut(s)	179, 1709
DseDI	GACNNNNNNGTC	2 cut(s)	179, 1709
EaeI	YGGCCR	1 cut(s)	1692
Eam1104I	CTCTTC	4 cut(s)	495, 1184, 1451, 1476
EarI	CTCTTC	4 cut(s)	495, 1184, 1451, 1476
Eco130I	CCWWGG	5 cut(s)	513, 542, 1104, 2072, 2196
Eco47I	GGWCC	4 cut(s)	261, 728, 1791, 2100
Eco47III	AGCGCT	1 cut(s)	399
Eco91I	GGTNACC	2 cut(s)	1131, 1718
EcoNI	CCTNNNNNAGG	1 cut(s)	828
EcoO109I	RGGNCCY	2 cut(s)	728, 2100
EcoO65I	GGTNACC	2 cut(s)	1131, 1718
EcoRII	CCWGG	2 cut(s)	730, 1038
EcoT14I	CCWWGG	5 cut(s)	513, 542, 1104, 2072, 2196
EcoT22I	ATGCAT	2 cut(s)	1627, 2140
ErhI	CCWWGG	5 cut(s)	513, 542, 1104, 2072, 2196
Esp3I	CGTCTC	1 cut(s)	1810
FaeI	CATG	8 cut(s)	341, 546, 756, 777, 788, 849, 1210, 1261
FalI	AAGNNNNNCTT	8 cut(s)	349, 381, 1395, 1427, 1593, 1625, 1879, 1911
FatI	CATG	8 cut(s)	337, 542, 752, 773, 784, 845, 1206, 1257
FauNDI	CATATG	1 cut(s)	1246
FbaI	TGATCA	2 cut(s)	867, 1531
Fnu4HI	GCNGC	5 cut(s)	333, 674, 814, 1419, 1545
FokI	GGATG	3 cut(s)	1702, 2143, 2234
Fsp4HI	GCNGC	5 cut(s)	333, 674, 814, 1419, 1545
FspBI	CTAG	2 cut(s)	405, 1959
FspI	TGCGCA	1 cut(s)	336
GlaI	GCGC	2 cut(s)	336, 399
GluI	GCNGC	5 cut(s)	333, 674, 814, 1419, 1545
GsuI	CTGGAG	2 cut(s)	753, 1724
HaeII	RGCGCY	1 cut(s)	401
HaeIII	GGCC	7 cut(s)	72, 290, 535, 1463, 1694, 2040, 2065
HgaI	GACGC	2 cut(s)	62, 331
HhaI	GCGC	2 cut(s)	337, 400
Hin1I	GRCGYC	2 cut(s)	342, 996
Hin1II	CATG	8 cut(s)	341, 546, 756, 777, 788, 849, 1210, 1261
Hin6I	GCGC	2 cut(s)	335, 398
HinP1I	GCGC	2 cut(s)	335, 398
HincII	GTYRAC	3 cut(s)	184, 191, 1714
HindII	GTYRAC	3 cut(s)	184, 191, 1714
HindIII	AAGCTT	2 cut(s)	358, 1888
HinfI	GANTC	6 cut(s)	553, 1062, 1379, 1428, 1962, 2121
Hpy166II	GTNNAC	7 cut(s)	184, 191, 899, 1440, 1513, 1647, 1714
Hpy188III	TCNNGA	6 cut(s)	50, 170, 429, 685, 1741, 1959
Hpy8I	GTNNAC	7 cut(s)	184, 191, 899, 1440, 1513, 1647, 1714
Hpy99I	CGWCG	6 cut(s)	289, 347, 479, 482, 1089, 2165
HpyAV	CCTTC	4 cut(s)	1156, 1421, 1428, 2209
HpyCH4IV	ACGT	3 cut(s)	967, 996, 1013
HpyF10VI	GCNNNNNNNGC	5 cut(s)	208, 334, 813, 1614, 1924
HpyF3I	CTNAG	6 cut(s)	302, 390, 551, 1213, 2094, 2150
HpySE526I	ACGT	3 cut(s)	967, 996, 1013
Hsp92I	GRCGYC	2 cut(s)	342, 996
Hsp92II	CATG	8 cut(s)	341, 546, 756, 777, 788, 849, 1210, 1261
HspAI	GCGC	2 cut(s)	335, 398
Kpn2I	TCCGGA	1 cut(s)	49
KpnI	GGTACC	2 cut(s)	1129, 1169
Ksp22I	TGATCA	2 cut(s)	867, 1531
Kzo9I	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
LmnI	GCTCC	6 cut(s)	121, 200, 797, 1150, 1730, 1833
Lsp1109I	GCAGC	5 cut(s)	319, 685, 825, 1405, 1556
LweI	GCATC	7 cut(s)	635, 967, 1304, 1335, 1759, 2125, 2165
MaeI	CTAG	2 cut(s)	405, 1959
MaeII	ACGT	3 cut(s)	967, 996, 1013
MalI	GATC	8 cut(s)	7, 27, 540, 571, 869, 1270, 1533, 1550
MbiI	CCGCTC	1 cut(s)	1725
MboI	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
MboII	GAAGA	9 cut(s)	35, 417, 482, 579, 1171, 1368, 1468, 1493, 1947
MfeI	CAATTG	2 cut(s)	1272, 1823
MflI	RGATCY	3 cut(s)	5, 25, 569
MhlI	GDGCHC	2 cut(s)	1214, 2148
MlsI	TGGCCA	1 cut(s)	1694
MluNI	TGGCCA	1 cut(s)	1694
MlyI	GAGTC	1 cut(s)	562
MmeI	TCCRAC	3 cut(s)	261, 1821, 2184
Mox20I	TGGCCA	1 cut(s)	1694
Mph1103I	ATGCAT	2 cut(s)	1627, 2140
MroI	TCCGGA	1 cut(s)	49
MroXI	GAANNNNTTC	1 cut(s)	762
MscI	TGGCCA	1 cut(s)	1694
MslI	CAYNNNNRTG	3 cut(s)	152, 216, 2151
Msp20I	TGGCCA	1 cut(s)	1694
MspA1I	CMGCKG	2 cut(s)	68, 1708
MspR9I	CCNGG	3 cut(s)	732, 855, 1040
MunI	CAATTG	2 cut(s)	1272, 1823
Mva1269I	GAATGC	1 cut(s)	575
MvaI	CCWGG	2 cut(s)	732, 1040
MwoI	GCNNNNNNNGC	5 cut(s)	208, 334, 813, 1614, 1924
NciI	CCSGG	1 cut(s)	855
NcoI	CCATGG	1 cut(s)	542
NdeI	CATATG	1 cut(s)	1246
NdeII	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
NlaIII	CATG	8 cut(s)	341, 546, 756, 777, 788, 849, 1210, 1261
NlaIV	GGNNCC	7 cut(s)	7, 123, 1127, 1167, 2041, 2147, 2194
NmuCI	GTSAC	7 cut(s)	170, 997, 1131, 1348, 1700, 1718, 1865
NsbI	TGCGCA	1 cut(s)	336
NsiI	ATGCAT	2 cut(s)	1627, 2140
NspI	RCATGY	2 cut(s)	1210, 1261
NspV	TTCGAA	1 cut(s)	1117
OliI	CACNNNNGTG	3 cut(s)	152, 216, 2151
PaeI	GCATGC	1 cut(s)	1261
PaqCI	CACCTGC	1 cut(s)	1144
PciI	ACATGT	1 cut(s)	1206
PcsI	WCGNNNNNNNCGW	4 cut(s)	2010, 2040, 2130, 2169
PctI	GAATGC	1 cut(s)	575
PdmI	GAANNNNTTC	1 cut(s)	762
PfeI	GAWTC	5 cut(s)	1062, 1379, 1428, 1962, 2121
PflFI	GACNNNGTC	1 cut(s)	1871
PflMI	CCANNNNNTGG	1 cut(s)	1788
PfoI	TCCNGGA	1 cut(s)	730
PinAI	ACCGGT	1 cut(s)	1128
PkrI	GCNGC	5 cut(s)	334, 675, 815, 1420, 1546
PleI	GAGTC	1 cut(s)	561
PpsI	GAGTC	1 cut(s)	561
Ppu21I	YACGTR	1 cut(s)	968
PpuMI	RGGWCCY	2 cut(s)	728, 2100
PscI	ACATGT	1 cut(s)	1206
Psp5II	RGGWCCY	2 cut(s)	728, 2100
Psp6I	CCWGG	2 cut(s)	730, 1038
PspEI	GGTNACC	2 cut(s)	1131, 1718
PspGI	CCWGG	2 cut(s)	730, 1038
PspN4I	GGNNCC	7 cut(s)	7, 123, 1127, 1167, 2041, 2147, 2194
PspPI	GGNCC	8 cut(s)	261, 289, 534, 728, 1461, 1791, 2039, 2100
PspPPI	RGGWCCY	2 cut(s)	728, 2100
PsuI	RGATCY	3 cut(s)	5, 25, 569
PsyI	GACNNNGTC	1 cut(s)	1871
PvuII	CAGCTG	2 cut(s)	68, 1708
RsaI	GTAC	7 cut(s)	136, 324, 1057, 1127, 1167, 1514, 2108
RsaNI	GTAC	7 cut(s)	135, 323, 1056, 1126, 1166, 1513, 2107
RseI	CAYNNNNRTG	3 cut(s)	152, 216, 2151
SatI	GCNGC	5 cut(s)	333, 674, 814, 1419, 1545
Sau3AI	GATC	8 cut(s)	5, 25, 538, 569, 867, 1268, 1531, 1548
Sau96I	GGNCC	8 cut(s)	261, 289, 534, 728, 1461, 1791, 2039, 2100
ScaI	AGTACT	1 cut(s)	136
SchI	GAGTC	1 cut(s)	562
ScrFI	CCNGG	3 cut(s)	732, 855, 1040
SduI	GDGCHC	2 cut(s)	1214, 2148
SfaNI	GCATC	7 cut(s)	635, 967, 1304, 1335, 1759, 2125, 2165
SfcI	CTRYAG	1 cut(s)	1192
SfuI	TTCGAA	1 cut(s)	1117
SgrAI	CRCCGGYG	1 cut(s)	1862
SinI	GGWCC	4 cut(s)	261, 728, 1791, 2100
SmiMI	CAYNNNNRTG	3 cut(s)	152, 216, 2151
SmlI	CTYRAG	1 cut(s)	1401
SmoI	CTYRAG	1 cut(s)	1401
SphI	GCATGC	1 cut(s)	1261
SsiI	CCGC	4 cut(s)	573, 795, 1586, 1723
SspI	AATATT	1 cut(s)	681
SspMI	CTAG	2 cut(s)	405, 1959
StyD4I	CCNGG	3 cut(s)	730, 853, 1038
StyI	CCWWGG	5 cut(s)	513, 542, 1104, 2072, 2196
TaiI	ACGT	3 cut(s)	970, 999, 1016
TaqI	TCGA	9 cut(s)	474, 521, 589, 654, 721, 1117, 2004, 2051, 2133
TatI	WGTACW	4 cut(s)	134, 322, 1055, 1512
TfiI	GAWTC	5 cut(s)	1062, 1379, 1428, 1962, 2121
TscAI	CASTG	4 cut(s)	1006, 1429, 1846, 2158
TseFI	GTSAC	7 cut(s)	170, 997, 1131, 1348, 1700, 1718, 1865
TseI	GCWGC	5 cut(s)	332, 673, 813, 1418, 1544
Tsp45I	GTSAC	7 cut(s)	170, 997, 1131, 1348, 1700, 1718, 1865
TspDTI	ATGAA	4 cut(s)	773, 876, 1263, 1803
TspGWI	ACGGA	1 cut(s)	389
TspRI	CASTG	4 cut(s)	1006, 1429, 1846, 2158
Tth111I	GACNNNGTC	1 cut(s)	1871
Van91I	CCANNNNNTGG	1 cut(s)	1788
VpaK11BI	GGWCC	4 cut(s)	261, 728, 1791, 2100
XagI	CCTNNNNNAGG	1 cut(s)	828
XapI	RAATTY	3 cut(s)	780, 1289, 1810
XbaI	TCTAGA	1 cut(s)	1958
XceI	RCATGY	2 cut(s)	1210, 1261
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1678
XmnI	GAANNNNTTC	1 cut(s)	762
XspI	CTAG	2 cut(s)	405, 1959
ZraI	GACGTC	1 cut(s)	997
ZrmI	AGTACT	1 cut(s)	136
Zsp2I	ATGCAT	2 cut(s)	1627, 2140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.