RLG00000015800
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
1520809 .. 1522779
1971 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015800

Sequence Viewer

Length: 975 bp
ATGAACAAATACGAGCGTGTCCGGACGCTTTCCAAGACTGGGAGGTACGGCGAAGTCTACTCCGTGAGGAACAAGCAGACGAATGAGTATTTCATCGCCCAAGAATTCAATCGGAGAGGCCTTGAAGTTGCCCGGCGCGAATGCGGGTTCCTGGACGAGCTATTCGGGTCGGGTCATGTTATCAAGAAAGTGGAGGAAATCCCGAACTCCGGTGAGCGACTCGCCGTCACGGTGGTCTACGAAGCTCTCGCCGCGACAAGTCTGAGGCGGTTCTTGGACGCCAGCCCCGAACAGCCTCTGGAGCTCCGGGTCGTCAAATCGATCATATACCAAATCTTGAAGGGTTTGGCCGACGCTCACGGCCTGGGTATTTTTCACCGTGATATCCGGCCCAGTAAGATCGTCGTCGCGGTAGCCGACAATGGGTCGTTGACAGTCAAGATAGTGGATTTCAGGGACGCCAGAAGGGTGGGTCCACCGGAACCCGTCACTCCGACTAGAGACATCGAAAAGGTGAATCTTTACTACCAGTCGCCGGAGCAGCTCATGGGCTCCACAAGCTACGGCGCCGCCGTCGACATGTGGGCGGTCGGATGCATTCTTGCTGAGTTGGCAGATAGGGGCAGGGTTTTGTTCCCTGGAATGAACCTTATCGATTCAAACAGGACACTAATTCAACCCACGGAGCAGGATACCGAGACACAGTATCTAGGTCAGCTCTACAAGATTTTCAGTATACGCGGTACTCCTCGCCTTCACCTTCTACCTGCAGATGTAGCTGGCCTTCTGGACTGGGAGACTGTCCCTCGGTTTCGCAGAGCCAACCTCCTCCGACGTTTCCCGATGCTTGGTGTTTCTGGCAATCTGCTCCTGGCGCGTTTGTTGAGCTACTCTCCAGTAGAAAGGCTGTCAGCTGCTGCCGCGATTGGGCACGACTTTTTCAAGGAACTGCGCCCTCAATCAGATGCAGAATAA

Protein Analysis

325

Amino Acids

36.45

Weight (kDa)

8.97

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 13 - 314 1.6e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 46 - 243 8.4e-13 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 775
AccB1I GGYRCC 1 cut(s) 566
AccI GTMKAC 4 cut(s) 57, 237, 576, 736
AccII CGCG 6 cut(s) 138, 254, 410, 741, 877, 923
AccIII TCCGGA 1 cut(s) 21
AciI CCGC 8 cut(s) 144, 252, 268, 410, 570, 587, 741, 921
AcoI YGGCCR 1 cut(s) 348
AcsI RAATTY 1 cut(s) 104
AcyI GRCGYC 3 cut(s) 279, 459, 567
AfaI GTAC 2 cut(s) 47, 745
AfiI CCNNNNNNNGG 6 cut(s) 39, 209, 423, 535, 848, 927
AflIII ACRYGT 1 cut(s) 579
AgsI TTSAA 6 cut(s) 109, 125, 340, 660, 677, 943
AhdI GACNNNNNGTC 2 cut(s) 224, 424
AjnI CCWGG 4 cut(s) 150, 363, 637, 870
AluBI AGCT 9 cut(s) 160, 245, 304, 544, 561, 718, 779, 888, 914
AluI AGCT 9 cut(s) 160, 245, 304, 544, 561, 718, 779, 888, 914
Alw21I GWGCWC 1 cut(s) 306
Alw26I GTCTC 3 cut(s) 495, 692, 791
AlwNI CAGNNNCTG 2 cut(s) 298, 917
Aor13HI TCCGGA 1 cut(s) 21
AoxI GGCC 5 cut(s) 118, 348, 361, 389, 781
ApeKI GCWGC 3 cut(s) 541, 914, 917
ApoI RAATTY 1 cut(s) 104
ArsI GACNNNNNNTTYG 2 cut(s) 146, 178
AspLEI GCGC 4 cut(s) 138, 569, 877, 954
AspS9I GGNCC 2 cut(s) 390, 473
AsuC2I CCSGG 2 cut(s) 133, 308
AsuHPI GGTGA 4 cut(s) 224, 368, 526, 749
AvaII GGWCC 1 cut(s) 473
BaeGI GKGCMC 1 cut(s) 933
BanI GGYRCC 1 cut(s) 566
BanII GRGCYC 2 cut(s) 306, 554
BarI GAAGNNNNNNTAC 2 cut(s) 768, 800
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 3 cut(s) 553, 901, 904
BceAI ACGGC 5 cut(s) 64, 209, 376, 557, 580
BciT130I CCWGG 4 cut(s) 152, 365, 639, 872
BciVI GTATCC 1 cut(s) 685
BcnI CCSGG 2 cut(s) 133, 308
BcoDI GTCTC 3 cut(s) 495, 692, 791
BfaI CTAG 2 cut(s) 498, 710
BfmI CTRYAG 1 cut(s) 768
BfoI RGCGCY 1 cut(s) 570
BfuAI ACCTGC 1 cut(s) 775
BfuI GTATCC 1 cut(s) 685
BisI GCNGC 6 cut(s) 252, 542, 570, 915, 918, 921
BlsI GCNGC 6 cut(s) 253, 543, 571, 916, 919, 922
Bme1390I CCNGG 6 cut(s) 133, 152, 308, 365, 639, 872
Bme18I GGWCC 1 cut(s) 473
BmeRI GACNNNNNGTC 2 cut(s) 224, 424
BmgT120I GGNCC 2 cut(s) 390, 473
BmiI GGNNCC 5 cut(s) 149, 474, 483, 553, 568
BmrFI CCNGG 6 cut(s) 133, 152, 308, 365, 639, 872
BmrI ACTGGG 3 cut(s) 48, 387, 802
BmsI GCATC 3 cut(s) 584, 834, 955
BmuI ACTGGG 3 cut(s) 48, 387, 802
BplI GAGNNNNNCTC 4 cut(s) 810, 842, 877, 909
BpmI CTGGAG 2 cut(s) 320, 879
BpuMI CCSGG 2 cut(s) 133, 308
Bsa29I ATCGAT 2 cut(s) 320, 654
BsaHI GRCGYC 3 cut(s) 279, 459, 567
BsaJI CCNNGG 4 cut(s) 364, 637, 681, 806
BsaWI WCCGGW 3 cut(s) 21, 209, 478
Bsc4I CCNNNNNNNGG 6 cut(s) 39, 209, 423, 535, 848, 927
Bse1I ACTGG 5 cut(s) 43, 393, 529, 797, 896
BseAI TCCGGA 1 cut(s) 21
BseBI CCWGG 4 cut(s) 152, 365, 639, 872
BseCI ATCGAT 2 cut(s) 320, 654
BseDI CCNNGG 4 cut(s) 364, 637, 681, 806
BseGI GGATG 1 cut(s) 599
BseLI CCNNNNNNNGG 6 cut(s) 39, 209, 423, 535, 848, 927
BseMII CTCAG 2 cut(s) 254, 597
BseNI ACTGG 5 cut(s) 43, 393, 529, 797, 896
BseRI GAGGAG 2 cut(s) 738, 818
BseSI GKGCMC 1 cut(s) 933
BseXI GCAGC 3 cut(s) 553, 901, 904
Bsh1236I CGCG 6 cut(s) 138, 254, 410, 741, 877, 923
Bsh1285I CGRYCG 1 cut(s) 591
BshFI GGCC 5 cut(s) 120, 350, 363, 391, 783
BshNI GGYRCC 1 cut(s) 566
BshVI ATCGAT 2 cut(s) 320, 654
BsiEI CGRYCG 1 cut(s) 591
BsiHKAI GWGCWC 1 cut(s) 306
BsiSI CCGG 7 cut(s) 22, 133, 210, 307, 388, 479, 536
BslFI GGGAC 2 cut(s) 470, 788
BslI CCNNNNNNNGG 6 cut(s) 39, 209, 423, 535, 848, 927
BsmAI GTCTC 3 cut(s) 495, 692, 791
BsmFI GGGAC 2 cut(s) 470, 788
BsmI GAATGC 2 cut(s) 146, 597
BsnI GGCC 5 cut(s) 120, 350, 363, 391, 783
Bsp1286I GDGCHC 3 cut(s) 306, 554, 933
Bsp13I TCCGGA 1 cut(s) 21
Bsp143I GATC 2 cut(s) 321, 399
BspACI CCGC 8 cut(s) 144, 252, 268, 410, 570, 587, 741, 921
BspANI GGCC 5 cut(s) 120, 350, 363, 391, 783
BspCNI CTCAG 2 cut(s) 255, 598
BspDI ATCGAT 2 cut(s) 320, 654
BspEI TCCGGA 1 cut(s) 21
BspFNI CGCG 6 cut(s) 138, 254, 410, 741, 877, 923
BspLI GGNNCC 5 cut(s) 149, 474, 483, 553, 568
BspMAI CTGCAG 1 cut(s) 772
BspMI ACCTGC 1 cut(s) 775
BspT107I GGYRCC 1 cut(s) 566
BsrI ACTGG 5 cut(s) 43, 393, 529, 797, 896
BssECI CCNNGG 4 cut(s) 364, 637, 681, 806
BssMI GATC 2 cut(s) 321, 399
BssNAI GTATAC 1 cut(s) 737
BssNI GRCGYC 3 cut(s) 279, 459, 567
Bst1107I GTATAC 1 cut(s) 737
Bst2UI CCWGG 4 cut(s) 152, 365, 639, 872
Bst4CI ACNGT 5 cut(s) 232, 380, 436, 705, 802
BstACI GRCGYC 3 cut(s) 279, 459, 567
BstC8I GCNNGC 2 cut(s) 283, 781
BstDEI CTNAG 2 cut(s) 263, 606
BstDSI CCRYGG 1 cut(s) 681
BstF5I GGATG 1 cut(s) 599
BstFNI CGCG 6 cut(s) 138, 254, 410, 741, 877, 923
BstH2I RGCGCY 1 cut(s) 570
BstHHI GCGC 4 cut(s) 138, 569, 877, 954
BstKTI GATC 2 cut(s) 324, 402
BstMAI GTCTC 3 cut(s) 495, 692, 791
BstMBI GATC 2 cut(s) 321, 399
BstMCI CGRYCG 1 cut(s) 591
BstMWI GCNNNNNNNGC 8 cut(s) 251, 301, 541, 558, 611, 776, 874, 920
BstNI CCWGG 4 cut(s) 152, 365, 639, 872
BstNSI RCATGY 1 cut(s) 583
BstSCI CCNGG 6 cut(s) 131, 150, 306, 363, 637, 870
BstSFI CTRYAG 1 cut(s) 768
BstSLI GKGCMC 1 cut(s) 933
BstUI CGCG 6 cut(s) 138, 254, 410, 741, 877, 923
BstV1I GCAGC 3 cut(s) 553, 901, 904
BstXI CCANNNNNNTGG 1 cut(s) 469
BstZ17I GTATAC 1 cut(s) 737
Bsu15I ATCGAT 2 cut(s) 320, 654
BsuI GTATCC 1 cut(s) 685
BsuRI GGCC 5 cut(s) 120, 350, 363, 391, 783
BsuTUI ATCGAT 2 cut(s) 320, 654
BtgI CCRYGG 1 cut(s) 681
BtgZI GCGATG 1 cut(s) 79
BtsCI GGATG 1 cut(s) 599
BveI ACCTGC 1 cut(s) 775
Cac8I GCNNGC 2 cut(s) 283, 781
CaiI CAGNNNCTG 2 cut(s) 298, 917
CfoI GCGC 4 cut(s) 138, 569, 877, 954
Cfr13I GGNCC 2 cut(s) 390, 473
ClaI ATCGAT 2 cut(s) 320, 654
CseI GACGC 4 cut(s) 34, 287, 362, 467
Csp6I GTAC 2 cut(s) 46, 744
CviAII CATG 3 cut(s) 176, 547, 580
CviQI GTAC 2 cut(s) 46, 744
DdeI CTNAG 2 cut(s) 263, 606
DinI GGCGCC 1 cut(s) 568
DpnI GATC 2 cut(s) 323, 401
DpnII GATC 2 cut(s) 321, 399
DriI GACNNNNNGTC 2 cut(s) 224, 424
EaeI YGGCCR 1 cut(s) 348
Eam1105I GACNNNNNGTC 2 cut(s) 224, 424
Ecl136II GAGCTC 1 cut(s) 304
Eco147I AGGCCT 1 cut(s) 120
Eco24I GRGCYC 2 cut(s) 306, 554
Eco32I GATATC 1 cut(s) 385
Eco47I GGWCC 1 cut(s) 473
Eco53kI GAGCTC 1 cut(s) 304
EcoICRI GAGCTC 1 cut(s) 304
EcoRI GAATTC 1 cut(s) 104
EcoRII CCWGG 4 cut(s) 150, 363, 637, 870
EcoRV GATATC 1 cut(s) 385
EcoT22I ATGCAT 1 cut(s) 599
EcoT38I GRGCYC 2 cut(s) 306, 554
EgeI GGCGCC 1 cut(s) 568
EheI GGCGCC 1 cut(s) 568
FaeI CATG 3 cut(s) 179, 550, 583
FaiI YATR 6 cut(s) 177, 326, 328, 548, 581, 737
FaqI GGGAC 2 cut(s) 470, 788
FatI CATG 3 cut(s) 175, 546, 579
FauI CCCGC 1 cut(s) 137
FblI GTMKAC 4 cut(s) 57, 237, 576, 736
Fnu4HI GCNGC 6 cut(s) 252, 542, 570, 915, 918, 921
FokI GGATG 1 cut(s) 606
FriOI GRGCYC 2 cut(s) 306, 554
Fsp4HI GCNGC 6 cut(s) 252, 542, 570, 915, 918, 921
FspBI CTAG 2 cut(s) 498, 710
GlaI GCGC 4 cut(s) 137, 568, 876, 953
GluI GCNGC 6 cut(s) 252, 542, 570, 915, 918, 921
GsuI CTGGAG 2 cut(s) 320, 879
HaeII RGCGCY 1 cut(s) 570
HaeIII GGCC 5 cut(s) 120, 350, 363, 391, 783
HapII CCGG 7 cut(s) 22, 133, 210, 307, 388, 479, 536
HgaI GACGC 4 cut(s) 34, 287, 362, 467
HhaI GCGC 4 cut(s) 138, 569, 877, 954
Hin1I GRCGYC 3 cut(s) 279, 459, 567
Hin1II CATG 3 cut(s) 179, 550, 583
Hin6I GCGC 4 cut(s) 136, 567, 875, 952
HinP1I GCGC 4 cut(s) 136, 567, 875, 952
HincII GTYRAC 2 cut(s) 432, 577
HindII GTYRAC 2 cut(s) 432, 577
HinfI GANTC 3 cut(s) 219, 517, 656
HpaII CCGG 7 cut(s) 22, 133, 210, 307, 388, 479, 536
HphI GGTGA 4 cut(s) 224, 368, 526, 749
Hpy166II GTNNAC 6 cut(s) 58, 238, 432, 476, 577, 737
Hpy188I TCNGA 6 cut(s) 114, 264, 495, 593, 833, 964
Hpy188III TCNNGA 8 cut(s) 22, 184, 202, 299, 337, 439, 788, 841
Hpy8I GTNNAC 6 cut(s) 58, 238, 432, 476, 577, 737
Hpy99I CGWCG 5 cut(s) 356, 407, 410, 578, 837
HpyAV CCTTC 5 cut(s) 334, 459, 764, 770, 794
HpyCH4III ACNGT 5 cut(s) 232, 380, 436, 705, 802
HpyCH4IV ACGT 1 cut(s) 835
HpyCH4V TGCA 3 cut(s) 597, 770, 968
HpyF10VI GCNNNNNNNGC 8 cut(s) 251, 301, 541, 558, 611, 776, 874, 920
HpyF3I CTNAG 2 cut(s) 263, 606
HpySE526I ACGT 1 cut(s) 835
Hsp92I GRCGYC 3 cut(s) 279, 459, 567
Hsp92II CATG 3 cut(s) 179, 550, 583
HspAI GCGC 4 cut(s) 136, 567, 875, 952
KasI GGCGCC 1 cut(s) 566
Kpn2I TCCGGA 1 cut(s) 21
Kzo9I GATC 2 cut(s) 321, 399
LmnI GCTCC 6 cut(s) 301, 309, 538, 557, 685, 873
Lsp1109I GCAGC 3 cut(s) 553, 901, 904
LweI GCATC 3 cut(s) 584, 834, 955
MaeI CTAG 2 cut(s) 498, 710
MaeII ACGT 1 cut(s) 835
MaeIII GTNAC 2 cut(s) 226, 487
MalI GATC 2 cut(s) 323, 401
MboI GATC 2 cut(s) 321, 399
MhlI GDGCHC 3 cut(s) 306, 554, 933
MluCI AATT 2 cut(s) 104, 672
Mly113I GGCGCC 1 cut(s) 567
MlyI GAGTC 1 cut(s) 213
MmeI TCCRAC 3 cut(s) 518, 571, 856
Mph1103I ATGCAT 1 cut(s) 599
MroI TCCGGA 1 cut(s) 21
MspA1I CMGCKG 1 cut(s) 914
MspI CCGG 7 cut(s) 22, 133, 210, 307, 388, 479, 536
MspR9I CCNGG 6 cut(s) 133, 152, 308, 365, 639, 872
Mva1269I GAATGC 2 cut(s) 146, 597
MvaI CCWGG 4 cut(s) 152, 365, 639, 872
MvnI CGCG 6 cut(s) 138, 254, 410, 741, 877, 923
MwoI GCNNNNNNNGC 8 cut(s) 251, 301, 541, 558, 611, 776, 874, 920
NarI GGCGCC 1 cut(s) 567
NciI CCSGG 2 cut(s) 133, 308
NdeII GATC 2 cut(s) 321, 399
NlaIII CATG 3 cut(s) 179, 550, 583
NlaIV GGNNCC 5 cut(s) 149, 474, 483, 553, 568
NmuCI GTSAC 2 cut(s) 226, 487
NsiI ATGCAT 1 cut(s) 599
NspI RCATGY 1 cut(s) 583
PceI AGGCCT 1 cut(s) 120
PciI ACATGT 1 cut(s) 579
PcsI WCGNNNNNNNCGW 3 cut(s) 285, 414, 570
PctI GAATGC 2 cut(s) 146, 597
PfeI GAWTC 2 cut(s) 517, 656
PfoI TCCNGGA 1 cut(s) 150
PkrI GCNGC 6 cut(s) 253, 543, 571, 916, 919, 922
PleI GAGTC 1 cut(s) 213
PluTI GGCGCC 1 cut(s) 570
PpsI GAGTC 1 cut(s) 213
PscI ACATGT 1 cut(s) 579
Psp124BI GAGCTC 1 cut(s) 306
Psp6I CCWGG 4 cut(s) 150, 363, 637, 870
PspGI CCWGG 4 cut(s) 150, 363, 637, 870
PspN4I GGNNCC 5 cut(s) 149, 474, 483, 553, 568
PspPI GGNCC 2 cut(s) 390, 473
PstI CTGCAG 1 cut(s) 772
PstNI CAGNNNCTG 2 cut(s) 298, 917
PvuII CAGCTG 1 cut(s) 914
RsaI GTAC 2 cut(s) 47, 745
RsaNI GTAC 2 cut(s) 46, 744
SacI GAGCTC 1 cut(s) 306
SalI GTCGAC 1 cut(s) 575
SatI GCNGC 6 cut(s) 252, 542, 570, 915, 918, 921
Sau3AI GATC 2 cut(s) 321, 399
Sau96I GGNCC 2 cut(s) 390, 473
SchI GAGTC 1 cut(s) 213
ScrFI CCNGG 6 cut(s) 133, 152, 308, 365, 639, 872
SduI GDGCHC 3 cut(s) 306, 554, 933
SfaNI GCATC 3 cut(s) 584, 834, 955
SfcI CTRYAG 1 cut(s) 768
SfoI GGCGCC 1 cut(s) 568
SinI GGWCC 1 cut(s) 473
Sse9I AATT 2 cut(s) 104, 672
SseBI AGGCCT 1 cut(s) 120
SsiI CCGC 8 cut(s) 144, 252, 268, 410, 570, 587, 741, 921
SspDI GGCGCC 1 cut(s) 566
SspMI CTAG 2 cut(s) 498, 710
SstI GAGCTC 1 cut(s) 306
StuI AGGCCT 1 cut(s) 120
StyD4I CCNGG 6 cut(s) 131, 150, 306, 363, 637, 870
TaaI ACNGT 5 cut(s) 232, 380, 436, 705, 802
TaiI ACGT 1 cut(s) 838
TaqI TCGA 4 cut(s) 320, 507, 576, 654
TasI AATT 2 cut(s) 104, 672
TauI GCSGC 3 cut(s) 254, 572, 923
TfiI GAWTC 2 cut(s) 517, 656
TseFI GTSAC 2 cut(s) 226, 487
TseI GCWGC 3 cut(s) 541, 914, 917
Tsp45I GTSAC 2 cut(s) 226, 487
TspDTI ATGAA 3 cut(s) 17, 82, 659
TspGWI ACGGA 2 cut(s) 52, 698
VpaK11BI GGWCC 1 cut(s) 473
XapI RAATTY 1 cut(s) 104
XceI RCATGY 1 cut(s) 583
XmiI GTMKAC 4 cut(s) 57, 237, 576, 736
XspI CTAG 2 cut(s) 498, 710
Zsp2I ATGCAT 1 cut(s) 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.