Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002708

Physical Location & Seq

Genomic Coordinates Reverse (-)

10238266 .. 10241952

Gene Structure 3687 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027279

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGCAGCTGCAGATTCAAATAGATCATATGGGCTCTGTGATGGTAACATGCCTTGCTTGCCAATCTTGAGCTCTGCTACAAAGTCTTGTGAAGCAAATCAGCTGCCCCCGGCAGCGGATACTATTAGTGTGAATGGACAACCTCTAACTCCTGAAGAGCTTCTCACGTTACAAAGCTGCCCAAACCCTCCAAAGAAGCTAAAACCAGGAAACTATTGGTATGACAAGATTTGTGGACTTTGGGGGAAGGAAGGACAGAAGCCTTCAGAGGTAATCTCTCCCCACCTTTGTGTTGGGGGTCGCATGAAGGAAAATGCTAGCAACGGAAGCACACGGGTTTTCATTAATGGTCGGGAAATCACCAAAGTAGAGCTCCGGATGTTGCAGCTGGTAGGAGTTGAATGTGCTGGTAACCCACACTTTTGGGTGAATGAAGATGGGTCATACCAAGAGGAGGGCATGAACAATGTTAAAGGATCCATATGGCGCATGGCTGGATCAAAGCTTGTCTGTGCTGTCTTGTCACTGCCAGTCCCTTCTAGATCTTCAAATCCTATCATTCCCAAAATCATTGAGCAGAGAACACTTCAGAAGATACTTTTAGTTGGATGTAATGGATCTGGAGCAAGTACTATATTTAAACAGGCCAAGATTCTATATGAAGCTATCCCTTTTTCGGTGGATGAACGCATAAGTATTAAGTCTACAATACAAACAAACGTGTATAAGTATGTTGGTATACTTCTTGAGGTTCGGGAACGTTTTGAAGAGGAATGTTTGGCTGAGATAAGGAGGCAATGCTCTAGTCAACCAGTTGCCAGTGGAGACAGCAACAAAACGCCCTACTCCATTGGCCCGAAGCTGAAAGCATTCTCTGATTGGCTTCTTAAGACTGTGGTATCAGGCTATGTAGAGGCCATCTTCCCAGCTGCTACGCGTGAATTTGCACCATTTGTGGAGGAATTGTGGAATGATTCAGCCATTCAGGCCACATACAAGCGGTCAACTGAACTGGGAATGCTACCTAGTGTTGCTACTTATTTCATAAAGAGGGCTGTTCACATATTAAGAGTAAACTATGAGCCCACAGATGGAGACATCCTGTATGCCGAAGTTGATACTTCATCTACTGGGTTGGATTGTGTGGACTTCTCATTGCCCCAGTCAGTAATGAGAGATGACTTTTATGGTCGTGATACTACTGATCAGCATGACTCTTTGCTTAGGTACCAACTTGTTAGAGTAAATGCAGGACTTGGAGAAAGCTGTGAACAGTTGGACATGTTTGGAGATGTTGGAATAGTCATCTTCTGTGTGTCCTTGAGTGACTATGATCAATTTTATGCTGACAGTAATGGGACTTTCACAAACAAGATGCTGCAGAGCAGATCTGTTTTTGAGAGAATCGTTACTCATCCCACCTTTGAGCAGATGAACTGCCTTTTGCTTCTCAACGAGTTTGATTTGTTTGTGAAAAAGATGGCACGGGTCCCTTTAACTCTATGCGAATGGTTTGATGATTTTAATCCAGTGATTAACAATGACCTAGGTCATCGAGCATATGAGCATATAGCAGTGAAGTTCAAGAGGCTCTATTCTTCTCTAACTGACAAGAGATTGTATGTTTCGCTGGTGGAGGACTATGAACCTGGTAATGTACGTGAAGCTTTAAAGTATTCAACGGAGATTTTAAATTGGGATGAAGTGAGAGACGAATATTGGTGTTATTCAGATTCAGATTACTCTATTTCAGCTTCAGATACAGATTTAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001664 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0004857 GO:0005095 GO:0005102 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005834 GO:0005886 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008150 GO:0009898 GO:0009987 GO:0016020 GO:0016247 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019897 GO:0019898 GO:0023052 GO:0030234 GO:0030695 GO:0031234 GO:0031683 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034260 GO:0035639 GO:0036094 GO:0043086 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044877 GO:0048519 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051336 GO:0051346 GO:0051716 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0098772 GO:0098796 GO:0098797 GO:1901265 GO:1901363 GO:1902494 GO:1905360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-alpha

Protein Analysis

592

Amino Acids

66.38

Weight (kDa)

5.01

Isoelectric Point (pI)

46.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-alpha	PF00503	196 - 561	8.9e-59	G-protein alpha subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23460
fragaria_vesca	FvH4_1g14590 FvH4_1g14590
malus_domestica	MD00G1067300.v1.1 MD02G1159500.v1.1
prunus_persica	Prupe.7G144400_v2.0.a1
pyrus_communis	pycom02g12580 pycom15g23720
rosa_chinensis	RchiOBHm_Chr1g0367271 RchiOBHm_Chr1g0367281 RchiOBHm_Chr1g0367331 RchiOBHm_Chr2g0103371
rosa_laevigata	RLG00000017231 RLG00000027279 RLG00000027284
rosa_multiflora	Rmu_sc0001555.1_g000003 Rmu_sc0002434.1_g000010 Rmu_sc0011000.1_g000013
rosa_roxburghii	Rroxscaffold_2G00139680 Rroxscaffold_4G00289390 Rroxscaffold_4G00289470 Rroxscaffold_4G00289480
rosa_rugosa	Rorug02G0114700 Rorug06G0002300
rosa_samantha	Rh1AG342600 Rh1BG303200 Rh1BG303600 Rh1BG303700 Rh1CG319500 Rh1CG319700 Rh1DG335600 Rh1DG336000 Rh1DG336100 Rh2AG162700 Rh2BG169800 Rh2CG169900 Rh2DG168800
rosa_wichuraiana	Rw1G030440 Rw2G012780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1227
AccB1I	GGYRCC	1 cut(s)	1227
AccI	GTMKAC	2 cut(s)	704, 739
AccII	CGCG	1 cut(s)	937
AccIII	TCCGGA	1 cut(s)	375
AciI	CCGC	2 cut(s)	116, 1000
AclI	AACGTT	1 cut(s)	760
AclWI	GGATC	4 cut(s)	471, 484, 505, 625
AcsI	RAATTY	1 cut(s)	941
AcuI	CTGAAG	4 cut(s)	174, 249, 572, 1740
AfaI	GTAC	3 cut(s)	631, 1229, 1659
AfiI	CCNNNNNNNGG	4 cut(s)	115, 454, 676, 1091
AflII	CTTAAG	1 cut(s)	887
AflIII	ACRYGT	3 cut(s)	720, 935, 1281
AgsI	TTSAA	6 cut(s)	18, 401, 549, 767, 1585, 1680
AjnI	CCWGG	2 cut(s)	205, 1648
AleI	CACNNNNGTG	1 cut(s)	288
Alw21I	GWGCWC	2 cut(s)	74, 375
Alw26I	GTCTC	3 cut(s)	819, 1089, 1704
AlwI	GGATC	4 cut(s)	471, 484, 505, 625
Aor13HI	TCCGGA	1 cut(s)	375
AoxI	GGCC	4 cut(s)	645, 853, 915, 987
ApeKI	GCWGC	8 cut(s)	5, 8, 103, 113, 177, 385, 929, 1378
ApoI	RAATTY	1 cut(s)	941
AseI	ATTAAT	1 cut(s)	345
Asp700I	GAANNNNTTC	2 cut(s)	159, 869
Asp718I	GGTACC	1 cut(s)	1227
AspA2I	CCTAGG	1 cut(s)	1546
AspLEI	GCGC	1 cut(s)	489
AspS9I	GGNCC	2 cut(s)	854, 1489
AsuC2I	CCSGG	1 cut(s)	110
AsuHPI	GGTGA	2 cut(s)	352, 439
AsuNHI	GCTAGC	1 cut(s)	317
AvaII	GGWCC	1 cut(s)	1489
AvrII	CCTAGG	1 cut(s)	1546
BaeI	ACNNNNGTAYC	2 cut(s)	882, 915
BamHI	GGATCC	1 cut(s)	476
BanI	GGYRCC	1 cut(s)	1227
BanII	GRGCYC	4 cut(s)	36, 74, 375, 1086
Bbv12I	GWGCWC	2 cut(s)	74, 375
BbvI	GCAGC	7 cut(s)	17, 90, 125, 164, 397, 916, 1365
BccI	CCATC	5 cut(s)	35, 431, 926, 1085, 1474
BciT130I	CCWGG	2 cut(s)	207, 1650
BciVI	GTATCC	1 cut(s)	112
BclI	TGATCA	2 cut(s)	1204, 1333
BcnI	CCSGG	1 cut(s)	110
BcoDI	GTCTC	3 cut(s)	819, 1089, 1704
BfaI	CTAG	5 cut(s)	318, 540, 804, 1026, 1547
BfmI	CTRYAG	2 cut(s)	9, 1379
BfrI	CTTAAG	1 cut(s)	887
BfuI	GTATCC	1 cut(s)	112
BglI	GCCNNNNNGGC	1 cut(s)	986
BglII	AGATCT	2 cut(s)	542, 1388
BisI	GCNGC	8 cut(s)	6, 9, 104, 114, 178, 386, 930, 1379
BlnI	CCTAGG	1 cut(s)	1546
BlsI	GCNGC	8 cut(s)	7, 10, 105, 115, 179, 387, 931, 1380
BmcAI	AGTACT	1 cut(s)	631
Bme1390I	CCNGG	3 cut(s)	110, 207, 1650
Bme18I	GGWCC	1 cut(s)	1489
BmgT120I	GGNCC	2 cut(s)	854, 1489
BmiI	GGNNCC	4 cut(s)	478, 1229, 1490, 1491
BmrFI	CCNGG	3 cut(s)	110, 207, 1650
BmrI	ACTGGG	3 cut(s)	1022, 1140, 1156
BmsI	GCATC	1 cut(s)	1365
BmtI	GCTAGC	1 cut(s)	321
BmuI	ACTGGG	3 cut(s)	1022, 1140, 1156
BoxI	GACNNNNGTC	1 cut(s)	1548
BplI	GAGNNNNNCTC	2 cut(s)	260, 292
BpmI	CTGGAG	1 cut(s)	642
Bpu10I	CCTNAGC	1 cut(s)	1223
BpuEI	CTTGAG	3 cut(s)	88, 767, 1342
BpuMI	CCSGG	1 cut(s)	110
BsaAI	YACGTR	1 cut(s)	1661
BsaBI	GATNNNNATC	1 cut(s)	1524
BsaJI	CCNNGG	2 cut(s)	108, 1546
BsaWI	WCCGGW	1 cut(s)	375
BsaXI	ACNNNNNCTCC	2 cut(s)	950, 980
Bsc4I	CCNNNNNNNGG	4 cut(s)	115, 454, 676, 1091
Bse1I	ACTGG	7 cut(s)	530, 812, 819, 1017, 1135, 1162, 1529
Bse3DI	GCAATG	2 cut(s)	803, 1154
Bse8I	GATNNNNATC	1 cut(s)	1524
BseAI	TCCGGA	1 cut(s)	375
BseBI	CCWGG	2 cut(s)	207, 1650
BseDI	CCNNGG	2 cut(s)	108, 1546
BseGI	GGATG	6 cut(s)	384, 614, 688, 1098, 1414, 1705
BseJI	GATNNNNATC	1 cut(s)	1524
BseLI	CCNNNNNNNGG	4 cut(s)	115, 454, 676, 1091
BseMI	GCAATG	2 cut(s)	803, 1154
BseMII	CTCAG	1 cut(s)	774
BseNI	ACTGG	7 cut(s)	530, 812, 819, 1017, 1135, 1162, 1529
BseRI	GAGGAG	1 cut(s)	467
BseXI	GCAGC	7 cut(s)	17, 90, 125, 164, 397, 916, 1365
BseYI	CCCAGC	1 cut(s)	925
Bsh1236I	CGCG	1 cut(s)	937
BshFI	GGCC	4 cut(s)	647, 855, 917, 989
BshNI	GGYRCC	1 cut(s)	1227
BsiHKAI	GWGCWC	2 cut(s)	74, 375
BsiSI	CCGG	2 cut(s)	110, 376
BslFI	GGGAC	3 cut(s)	518, 1372, 1475
BslI	CCNNNNNNNGG	4 cut(s)	115, 454, 676, 1091
BsmAI	GTCTC	3 cut(s)	819, 1089, 1704
BsmBI	CGTCTC	1 cut(s)	1704
BsmFI	GGGAC	3 cut(s)	518, 1372, 1475
BsmI	GAATGC	2 cut(s)	869, 1023
BsnI	GGCC	4 cut(s)	647, 855, 917, 989
Bsp1286I	GDGCHC	4 cut(s)	36, 74, 375, 1086
Bsp13I	TCCGGA	1 cut(s)	375
Bsp143I	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
BspACI	CCGC	2 cut(s)	116, 1000
BspANI	GGCC	4 cut(s)	647, 855, 917, 989
BspCNI	CTCAG	1 cut(s)	775
BspEI	TCCGGA	1 cut(s)	375
BspFNI	CGCG	1 cut(s)	937
BspLI	GGNNCC	4 cut(s)	478, 1229, 1490, 1491
BspMAI	CTGCAG	2 cut(s)	13, 1383
BspOI	GCTAGC	1 cut(s)	321
BspPI	GGATC	4 cut(s)	471, 484, 505, 625
BspQI	GCTCTTC	1 cut(s)	150
BspT107I	GGYRCC	1 cut(s)	1227
BspTI	CTTAAG	1 cut(s)	887
BsrDI	GCAATG	2 cut(s)	803, 1154
BsrI	ACTGG	7 cut(s)	530, 812, 819, 1017, 1135, 1162, 1529
BssECI	CCNNGG	2 cut(s)	108, 1546
BssMI	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
BssNAI	GTATAC	1 cut(s)	740
BssT1I	CCWWGG	1 cut(s)	1546
Bst1107I	GTATAC	1 cut(s)	740
Bst2UI	CCWGG	2 cut(s)	207, 1650
Bst4CI	ACNGT	3 cut(s)	895, 1275, 1352
Bst6I	CTCTTC	2 cut(s)	150, 762
BstAFI	CTTAAG	1 cut(s)	887
BstBAI	YACGTR	1 cut(s)	1661
BstC8I	GCNNGC	2 cut(s)	59, 319
BstDEI	CTNAG	2 cut(s)	783, 1223
BstEII	GGTNACC	1 cut(s)	410
BstF5I	GGATG	6 cut(s)	384, 614, 688, 1098, 1414, 1705
BstFNI	CGCG	1 cut(s)	937
BstHHI	GCGC	1 cut(s)	489
BstKTI	GATC	8 cut(s)	26, 479, 500, 545, 620, 1207, 1336, 1391
BstMAI	GTCTC	3 cut(s)	819, 1089, 1704
BstMBI	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
BstMWI	GCNNNNNNNGC	3 cut(s)	58, 327, 986
BstNI	CCWGG	2 cut(s)	207, 1650
BstNSI	RCATGY	2 cut(s)	52, 1285
BstPAI	GACNNNNGTC	1 cut(s)	1548
BstPI	GGTNACC	1 cut(s)	410
BstSCI	CCNGG	3 cut(s)	108, 205, 1648
BstSFI	CTRYAG	2 cut(s)	9, 1379
BstUI	CGCG	1 cut(s)	937
BstV1I	GCAGC	7 cut(s)	17, 90, 125, 164, 397, 916, 1365
BstX2I	RGATCY	4 cut(s)	476, 542, 617, 1388
BstXI	CCANNNNNNTGG	1 cut(s)	423
BstYI	RGATCY	4 cut(s)	476, 542, 617, 1388
BstZ17I	GTATAC	1 cut(s)	740
BsuI	GTATCC	1 cut(s)	112
BsuRI	GGCC	4 cut(s)	647, 855, 917, 989
BtsCI	GGATG	6 cut(s)	384, 614, 688, 1098, 1414, 1705
BtsI	GCAGTG	2 cut(s)	524, 1581
BtsIMutI	CAGTG	4 cut(s)	524, 826, 1536, 1581
Cac8I	GCNNGC	2 cut(s)	59, 319
CfoI	GCGC	1 cut(s)	489
Cfr13I	GGNCC	2 cut(s)	854, 1489
CsiI	ACCWGGT	1 cut(s)	1648
Csp6I	GTAC	3 cut(s)	630, 1228, 1658
CspCI	CAANNNNNGTGG	2 cut(s)	214, 249
CviAII	CATG	6 cut(s)	49, 304, 460, 490, 1211, 1282
CviQI	GTAC	3 cut(s)	630, 1228, 1658
DdeI	CTNAG	2 cut(s)	783, 1223
DpnI	GATC	8 cut(s)	25, 478, 499, 544, 619, 1206, 1335, 1390
DpnII	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
DraI	TTTAAA	3 cut(s)	640, 1671, 1692
Eam1104I	CTCTTC	2 cut(s)	150, 762
EarI	CTCTTC	2 cut(s)	150, 762
Ecl136II	GAGCTC	2 cut(s)	72, 373
Eco130I	CCWWGG	1 cut(s)	1546
Eco24I	GRGCYC	4 cut(s)	36, 74, 375, 1086
Eco47I	GGWCC	1 cut(s)	1489
Eco53kI	GAGCTC	2 cut(s)	72, 373
Eco57I	CTGAAG	4 cut(s)	174, 249, 572, 1740
Eco91I	GGTNACC	1 cut(s)	410
EcoICRI	GAGCTC	2 cut(s)	72, 373
EcoO109I	RGGNCCY	1 cut(s)	1489
EcoO65I	GGTNACC	1 cut(s)	410
EcoRII	CCWGG	2 cut(s)	205, 1648
EcoT14I	CCWWGG	1 cut(s)	1546
EcoT38I	GRGCYC	4 cut(s)	36, 74, 375, 1086
ErhI	CCWWGG	1 cut(s)	1546
Esp3I	CGTCTC	1 cut(s)	1704
FaeI	CATG	6 cut(s)	52, 307, 463, 493, 1214, 1285
FaqI	GGGAC	3 cut(s)	518, 1372, 1475
FatI	CATG	6 cut(s)	48, 303, 459, 489, 1210, 1281
FauNDI	CATATG	3 cut(s)	28, 482, 1561
FbaI	TGATCA	2 cut(s)	1204, 1333
FblI	GTMKAC	2 cut(s)	704, 739
Fnu4HI	GCNGC	8 cut(s)	6, 9, 104, 114, 178, 386, 930, 1379
FokI	GGATG	6 cut(s)	391, 621, 695, 1085, 1401, 1712
FriOI	GRGCYC	4 cut(s)	36, 74, 375, 1086
Fsp4HI	GCNGC	8 cut(s)	6, 9, 104, 114, 178, 386, 930, 1379
FspBI	CTAG	5 cut(s)	318, 540, 804, 1026, 1547
GlaI	GCGC	1 cut(s)	488
GluI	GCNGC	8 cut(s)	6, 9, 104, 114, 178, 386, 930, 1379
GsaI	CCCAGC	1 cut(s)	929
GsuI	CTGGAG	1 cut(s)	642
HaeIII	GGCC	4 cut(s)	647, 855, 917, 989
HapII	CCGG	2 cut(s)	110, 376
HhaI	GCGC	1 cut(s)	489
Hin1II	CATG	6 cut(s)	52, 307, 463, 493, 1214, 1285
Hin6I	GCGC	1 cut(s)	487
HinP1I	GCGC	1 cut(s)	487
HincII	GTYRAC	2 cut(s)	809, 1005
HindII	GTYRAC	2 cut(s)	809, 1005
HindIII	AAGCTT	2 cut(s)	503, 1665
HinfI	GANTC	6 cut(s)	14, 652, 974, 1214, 1404, 1733
HpaII	CCGG	2 cut(s)	110, 376
HphI	GGTGA	2 cut(s)	352, 439
Hpy166II	GTNNAC	9 cut(s)	236, 705, 740, 809, 1005, 1060, 1075, 1147, 1271
Hpy188I	TCNGA	6 cut(s)	268, 591, 877, 1732, 1738, 1759
Hpy8I	GTNNAC	9 cut(s)	236, 705, 740, 809, 1005, 1060, 1075, 1147, 1271
HpyAV	CCTTC	5 cut(s)	241, 245, 273, 301, 546
HpyCH4III	ACNGT	3 cut(s)	895, 1275, 1352
HpyCH4IV	ACGT	4 cut(s)	167, 720, 760, 1660
HpyCH4V	TGCA	5 cut(s)	11, 385, 947, 1250, 1381
HpyF10VI	GCNNNNNNNGC	3 cut(s)	58, 327, 986
HpyF3I	CTNAG	2 cut(s)	783, 1223
HpySE526I	ACGT	4 cut(s)	167, 720, 760, 1660
Hsp92II	CATG	6 cut(s)	52, 307, 463, 493, 1214, 1285
HspAI	GCGC	1 cut(s)	487
KflI	GGGWCCC	1 cut(s)	1489
Kpn2I	TCCGGA	1 cut(s)	375
KpnI	GGTACC	1 cut(s)	1231
Ksp22I	TGATCA	2 cut(s)	1204, 1333
Kzo9I	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
LguI	GCTCTTC	1 cut(s)	150
LmnI	GCTCC	2 cut(s)	378, 623
Lsp1109I	GCAGC	7 cut(s)	17, 90, 125, 164, 397, 916, 1365
LweI	GCATC	1 cut(s)	1365
MabI	ACCWGGT	1 cut(s)	1648
MaeI	CTAG	5 cut(s)	318, 540, 804, 1026, 1547
MaeII	ACGT	4 cut(s)	167, 720, 760, 1660
MaeIII	GTNAC	6 cut(s)	44, 168, 410, 522, 1325, 1408
MalI	GATC	8 cut(s)	25, 478, 499, 544, 619, 1206, 1335, 1390
MboI	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
MboII	GAAGA	8 cut(s)	167, 446, 537, 604, 779, 913, 1300, 1590
MflI	RGATCY	4 cut(s)	476, 542, 617, 1388
MhlI	GDGCHC	4 cut(s)	36, 74, 375, 1086
MluCI	AATT	4 cut(s)	941, 962, 1337, 1693
MluI	ACGCGT	1 cut(s)	935
MlyI	GAGTC	1 cut(s)	1208
MmeI	TCCRAC	4 cut(s)	586, 1116, 1257, 1276
MroI	TCCGGA	1 cut(s)	375
MroXI	GAANNNNTTC	2 cut(s)	159, 869
MslI	CAYNNNNRTG	1 cut(s)	288
MspA1I	CMGCKG	5 cut(s)	8, 103, 116, 388, 929
MspCI	CTTAAG	1 cut(s)	887
MspI	CCGG	2 cut(s)	110, 376
MspR9I	CCNGG	3 cut(s)	110, 207, 1650
Mva1269I	GAATGC	2 cut(s)	869, 1023
MvaI	CCWGG	2 cut(s)	207, 1650
MvnI	CGCG	1 cut(s)	937
MwoI	GCNNNNNNNGC	3 cut(s)	58, 327, 986
NciI	CCSGG	1 cut(s)	110
NdeI	CATATG	3 cut(s)	28, 482, 1561
NdeII	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
NheI	GCTAGC	1 cut(s)	317
NlaIII	CATG	6 cut(s)	52, 307, 463, 493, 1214, 1285
NlaIV	GGNNCC	4 cut(s)	478, 1229, 1490, 1491
NmuCI	GTSAC	2 cut(s)	522, 1325
NspI	RCATGY	2 cut(s)	52, 1285
OliI	CACNNNNGTG	1 cut(s)	288
PciI	ACATGT	1 cut(s)	1281
PciSI	GCTCTTC	1 cut(s)	150
PctI	GAATGC	2 cut(s)	869, 1023
PdmI	GAANNNNTTC	2 cut(s)	159, 869
PfeI	GAWTC	5 cut(s)	14, 652, 974, 1404, 1733
PkrI	GCNGC	8 cut(s)	7, 10, 105, 115, 179, 387, 931, 1380
PleI	GAGTC	1 cut(s)	1208
PpsI	GAGTC	1 cut(s)	1208
Ppu21I	YACGTR	1 cut(s)	1661
PpuMI	RGGWCCY	1 cut(s)	1489
PscI	ACATGT	1 cut(s)	1281
PshAI	GACNNNNGTC	1 cut(s)	1548
PshBI	ATTAAT	1 cut(s)	345
Psp124BI	GAGCTC	2 cut(s)	74, 375
Psp1406I	AACGTT	1 cut(s)	760
Psp5II	RGGWCCY	1 cut(s)	1489
Psp6I	CCWGG	2 cut(s)	205, 1648
PspEI	GGTNACC	1 cut(s)	410
PspFI	CCCAGC	1 cut(s)	925
PspGI	CCWGG	2 cut(s)	205, 1648
PspN4I	GGNNCC	4 cut(s)	478, 1229, 1490, 1491
PspPI	GGNCC	2 cut(s)	854, 1489
PspPPI	RGGWCCY	1 cut(s)	1489
PstI	CTGCAG	2 cut(s)	13, 1383
PsuI	RGATCY	4 cut(s)	476, 542, 617, 1388
PvuII	CAGCTG	4 cut(s)	8, 103, 388, 929
RsaI	GTAC	3 cut(s)	631, 1229, 1659
RsaNI	GTAC	3 cut(s)	630, 1228, 1658
RseI	CAYNNNNRTG	1 cut(s)	288
SacI	GAGCTC	2 cut(s)	74, 375
SapI	GCTCTTC	1 cut(s)	150
SatI	GCNGC	8 cut(s)	6, 9, 104, 114, 178, 386, 930, 1379
Sau3AI	GATC	8 cut(s)	23, 476, 497, 542, 617, 1204, 1333, 1388
Sau96I	GGNCC	2 cut(s)	854, 1489
ScaI	AGTACT	1 cut(s)	631
SchI	GAGTC	1 cut(s)	1208
ScrFI	CCNGG	3 cut(s)	110, 207, 1650
SduI	GDGCHC	4 cut(s)	36, 74, 375, 1086
SexAI	ACCWGGT	1 cut(s)	1648
SfaNI	GCATC	1 cut(s)	1365
SfcI	CTRYAG	2 cut(s)	9, 1379
SinI	GGWCC	1 cut(s)	1489
SmiMI	CAYNNNNRTG	1 cut(s)	288
SmlI	CTYRAG	4 cut(s)	67, 746, 887, 1321
SmoI	CTYRAG	4 cut(s)	67, 746, 887, 1321
Sse9I	AATT	4 cut(s)	941, 962, 1337, 1693
SsiI	CCGC	2 cut(s)	116, 1000
SspI	AATATT	1 cut(s)	1718
SspMI	CTAG	5 cut(s)	318, 540, 804, 1026, 1547
SstI	GAGCTC	2 cut(s)	74, 375
StyD4I	CCNGG	3 cut(s)	108, 205, 1648
StyI	CCWWGG	1 cut(s)	1546
TaaI	ACNGT	3 cut(s)	895, 1275, 1352
TaiI	ACGT	4 cut(s)	170, 723, 763, 1663
TaqI	TCGA	1 cut(s)	1555
TasI	AATT	4 cut(s)	941, 962, 1337, 1693
TatI	WGTACW	1 cut(s)	629
TfiI	GAWTC	5 cut(s)	14, 652, 974, 1404, 1733
TscAI	CASTG	4 cut(s)	531, 826, 1536, 1581
TseFI	GTSAC	2 cut(s)	522, 1325
TseI	GCWGC	8 cut(s)	5, 8, 103, 113, 177, 385, 929, 1378
Tsp45I	GTSAC	2 cut(s)	522, 1325
TspGWI	ACGGA	2 cut(s)	339, 1697
TspRI	CASTG	4 cut(s)	531, 826, 1536, 1581
Vha464I	CTTAAG	1 cut(s)	887
VpaK11BI	GGWCC	1 cut(s)	1489
VspI	ATTAAT	1 cut(s)	345
XapI	RAATTY	1 cut(s)	941
XbaI	TCTAGA	1 cut(s)	539
XceI	RCATGY	2 cut(s)	52, 1285
XcmI	CCANNNNNNNNNTGG	3 cut(s)	213, 290, 487
XmaJI	CCTAGG	1 cut(s)	1546
XmiI	GTMKAC	2 cut(s)	704, 739
XmnI	GAANNNNTTC	2 cut(s)	159, 869
XspI	CTAG	5 cut(s)	318, 540, 804, 1026, 1547
ZrmI	AGTACT	1 cut(s)	631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.