Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002434.1

Orthogroup ID

OG0002708

Physical Location & Seq

Genomic Coordinates Reverse (-)

39514 .. 44711

Gene Structure 5198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002434.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

atgcaaggaaaatcatcaacccctccccattcaaacaggagcgaggacgacacgaccaaggagttggaagggtcggaatcggcgacggtctcgccggcgtcggtgattgggttcgaggagagagcggaggagaggggggctgggtgtggtgctttgtccggagaattgagtagctccggcgggttggagttttcgaacgggttgaattacgggtcgggtgagctgtccgatgtgaataatggtagctgggcttggagcggaggagcattgacggctccgagtggtgggaaggagagtttggatttgaatcaacccgaacccgattgggcttcctccgagtccgttttgagcttggactatccgtcttctcgggtttcctccaccaaggctgtggattgcgatgtgaaacgacccgctgtagtgacgtttcgggacattgaatctgatgatgacgatggtgttgaggaagatgaggctgaggttgtgccggtgaagcgggagcctcagagcaaaggaaagaagaagtcttgttatagatgtctcaaggggactaggttcactgagaaggaggtgtgcattgtttgtgacgccaagtattgtagtagttgtgttctgagagctatggggtctatgcccgaaggccgaaaatgtgttacttgtattggatttcctattgatgagaacaaaagaggatgcttggggaagtgctctaggatgctcaagcggctgctgaatgatttggaggttcggcaggtgatgaaagccgaaaagttttgtgaagcaaatcagctaccgccgaattacatttgtgtgaatggacagcctctttgtcatgaggagcttgttgtgctacagacctgctcaaaccccccgaagaagctaaaaccaggaaactattggtatgataaagtttctggactttggggaaaggaaggacagaagccttcgaaggtaatcagtccccatcttagtgttgggggtcccatcaaggcaaatgctagtaatggaaacacacaggtttttatcaatggccgggaaattaccaaagttgagcttcggatgttacagttggcaggagttcagtgtgctggtaacccacacttttgggtgaatgaggatgggtcataccaagaggagggccagaaaaatactaaaggatacatatggggaaaggctggaaccaagcttgtttgtgctgtcttgtcactgccagtgccttctaaatcttcaaatccttgtggagaacccctgagctatgttggtaacagagtcgtccctgattacattgagcagagaatacttcagaaaattcttttagttggatataatggatccggaacaagtactatattcaaacaggccaagattctatataaagctatccctttctctgaagatgagcgtgaaaatattaagtttacaatacagagcaatgtatatggctatcttggtatactactggagggacgtgagcgttttgaagaggaaagtttggctgagatcagaaatcaatgttcttctagtcaaacagatgcgagagggaacaacaacaaaactctttactccattggcctgagactgaaaggattttctgattggcttctcaagataatggtgtcaggtgatttggaagccattttcccagctgctacccgtgaatatgcaccattggttgaggagttgtggaatgattcagccattcaagctacattcaagcggagaagtgaattggaaatgttacctggtgttgctacttatttcatagagagggctgttgacatattaagagtagactatgagccttcggatctggatattctatatgctgaaggtgttacttcatctaatgggcttgcttgtgtagacttctcatttccaccgtcggcatctgaagataacatcaatcataataatgatcagcaggactctttgcttaggtaccaactgattagagtaaatgcaagaggacttggagaaaactgcaaatggttggagatgtttgaagatgttggaatggtcatattctgtgtatccttgagcgactatgatctgttttctgtggatggtagtgggtccttttcaaacaagatgctacagaccagaagtttctttgaaagcatcattactcatccaacatttgaacatatggacttccttttgattctaaacaagtttgatgtgcttgaggaaaaggtagaaagggtaccccttagtcagtgtgactggtttgatgatttccatccagtggttagccgtcatcggtccagcagcaacaacagtagcaacaacattaatagtagcccctcgctgggtcatctagcagctcactacattgcagtaaagttcaagaggctatattcttctctaactggaaagaaactgtacgtttctctggtaaaagggttgcagcctaatagcgtagatgcagctcttaaatattcacgggagattttaaaatgggatgaagagagaggcaacttcagctttgattactctgtctatagcactgaggcaagctcttattcacattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001664 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0004857 GO:0005095 GO:0005102 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005834 GO:0005886 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008150 GO:0009898 GO:0009987 GO:0016020 GO:0016247 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019897 GO:0019898 GO:0023052 GO:0030234 GO:0030695 GO:0031234 GO:0031683 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034260 GO:0035639 GO:0036094 GO:0043086 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044877 GO:0048519 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051336 GO:0051346 GO:0051716 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0098772 GO:0098796 GO:0098797 GO:1901265 GO:1901363 GO:1902494 GO:1905360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-alpha

Protein Analysis

843

Amino Acids

93.43

Weight (kDa)

5.33

Isoelectric Point (pI)

46.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23460
fragaria_vesca	FvH4_1g14590 FvH4_1g14590
malus_domestica	MD00G1067300.v1.1 MD02G1159500.v1.1
prunus_persica	Prupe.7G144400_v2.0.a1
pyrus_communis	pycom02g12580 pycom15g23720
rosa_chinensis	RchiOBHm_Chr1g0367271 RchiOBHm_Chr1g0367281 RchiOBHm_Chr1g0367331 RchiOBHm_Chr2g0103371
rosa_laevigata	RLG00000017231 RLG00000027279 RLG00000027284
rosa_multiflora	Rmu_sc0001555.1_g000003 Rmu_sc0002434.1_g000010 Rmu_sc0011000.1_g000013
rosa_roxburghii	Rroxscaffold_2G00139680 Rroxscaffold_4G00289390 Rroxscaffold_4G00289470 Rroxscaffold_4G00289480
rosa_rugosa	Rorug02G0114700 Rorug06G0002300
rosa_samantha	Rh1AG342600 Rh1BG303200 Rh1BG303600 Rh1BG303700 Rh1CG319500 Rh1CG319700 Rh1DG335600 Rh1DG336000 Rh1DG336100 Rh2AG162700 Rh2BG169800 Rh2CG169900 Rh2DG168800
rosa_wichuraiana	Rw1G030440 Rw2G012780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	742
Acc36I	ACCTGC	2 cut(s)	742, 866
Acc65I	GGTACC	2 cut(s)	1938, 2203
AccB1I	GGYRCC	2 cut(s)	1938, 2203
AccB7I	CCANNNNNTGG	1 cut(s)	2245
AccBSI	CCGCTC	2 cut(s)	125, 258
AccI	GTMKAC	3 cut(s)	1453, 1791, 1863
AccIII	TCCGGA	2 cut(s)	158, 1334
AciI	CCGC	8 cut(s)	125, 180, 258, 414, 496, 724, 794, 1717
AclWI	GGATC	3 cut(s)	1326, 1339, 1815
AcoI	YGGCCR	1 cut(s)	1030
AcsI	RAATTY	1 cut(s)	1308
AcuI	CTGAAG	5 cut(s)	1286, 1413, 1848, 1911, 2464
AcyI	GRCGYC	2 cut(s)	98, 588
AfaI	GTAC	4 cut(s)	1345, 1940, 2205, 2384
AfiI	CCNNNNNNNGG	5 cut(s)	284, 1135, 2245, 2308, 2309
AhdI	GACNNNNNGTC	1 cut(s)	361
AjiI	CACGTC	1 cut(s)	1469
AjnI	CCWGG	2 cut(s)	886, 1741
AjuI	GAANNNNNNNTTGG	2 cut(s)	281, 313
Alw21I	GWGCWC	1 cut(s)	710
Alw26I	GTCTC	3 cut(s)	94, 545, 1570
AlwI	GGATC	3 cut(s)	1326, 1339, 1815
Ama87I	CYCGRG	1 cut(s)	369
Aor13HI	TCCGGA	2 cut(s)	158, 1334
AoxI	GGCC	5 cut(s)	640, 1030, 1138, 1359, 1570
ApeKI	GCWGC	6 cut(s)	727, 1646, 2268, 2321, 2407, 2426
ApoI	RAATTY	1 cut(s)	1308
ArsI	GACNNNNNNTTYG	2 cut(s)	810, 842
AseI	ATTAAT	1 cut(s)	2292
Asp718I	GGTACC	2 cut(s)	1938, 2203
AspS9I	GGNCC	4 cut(s)	980, 1138, 2073, 2262
AsuC2I	CCSGG	1 cut(s)	1034
AsuHPI	GGTGA	6 cut(s)	115, 230, 502, 766, 1120, 1634
AsuII	TTCGAA	2 cut(s)	194, 947
AvaI	CYCGRG	1 cut(s)	369
AvaII	GGWCC	3 cut(s)	980, 2073, 2262
BamHI	GGATCC	1 cut(s)	1331
BanI	GGYRCC	2 cut(s)	1938, 2203
BbsI	GAAGAC	1 cut(s)	357
Bbv12I	GWGCWC	1 cut(s)	710
BbvCI	CCTCAGC	1 cut(s)	477
BbvI	GCAGC	6 cut(s)	714, 1633, 2280, 2333, 2419, 2438
BccI	CCATC	6 cut(s)	449, 972, 992, 1112, 2057, 2247
BceAI	ACGGC	2 cut(s)	288, 2238
BciT130I	CCWGG	2 cut(s)	888, 1743
BciVI	GTATCC	2 cut(s)	1151, 2041
BclI	TGATCA	1 cut(s)	1915
BcnI	CCSGG	1 cut(s)	1034
BcoDI	GTCTC	3 cut(s)	94, 545, 1570
BfaI	CTAG	5 cut(s)	552, 711, 999, 1521, 2318
BfmI	CTRYAG	4 cut(s)	417, 851, 2093, 2500
BfuAI	ACCTGC	2 cut(s)	742, 866
BfuI	GTATCC	2 cut(s)	1151, 2041
BisI	GCNGC	7 cut(s)	725, 728, 1647, 2269, 2322, 2408, 2427
BlsI	GCNGC	7 cut(s)	726, 729, 1648, 2270, 2323, 2409, 2428
BmcAI	AGTACT	1 cut(s)	1345
Bme1390I	CCNGG	3 cut(s)	888, 1034, 1743
Bme18I	GGWCC	3 cut(s)	980, 2073, 2262
BmeRI	GACNNNNNGTC	1 cut(s)	361
BmeT110I	CYCGRG	1 cut(s)	369
BmgBI	CACGTC	1 cut(s)	1469
BmgT120I	GGNCC	4 cut(s)	980, 1138, 2073, 2262
BmiI	GGNNCC	9 cut(s)	276, 501, 981, 982, 1180, 1333, 1940, 2074, 2205
BmrFI	CCNGG	3 cut(s)	888, 1034, 1743
BmsI	GCATC	7 cut(s)	683, 705, 1522, 1895, 2079, 2127, 2413
BpiI	GAAGAC	1 cut(s)	357
BplI	GAGNNNNNCTC	1 cut(s)	2501
BpmI	CTGGAG	1 cut(s)	1481
Bpu10I	CCTNAGC	3 cut(s)	477, 1250, 1934
Bpu14I	TTCGAA	2 cut(s)	194, 947
BpuEI	CTTGAG	5 cut(s)	527, 704, 1589, 2056, 2204
BpuMI	CCSGG	1 cut(s)	1034
BsaBI	GATNNNNATC	2 cut(s)	306, 2238
BsaHI	GRCGYC	2 cut(s)	98, 588
BsaI	GGTCTC	1 cut(s)	94
BsaJI	CCNNGG	2 cut(s)	57, 384
BsaWI	WCCGGW	2 cut(s)	158, 1334
Bsc4I	CCNNNNNNNGG	5 cut(s)	284, 1135, 2245, 2308, 2309
Bse118I	RCCGGY	2 cut(s)	94, 487
Bse1I	ACTGG	5 cut(s)	1211, 1464, 2228, 2243, 2374
Bse3DI	GCAATG	2 cut(s)	1438, 2331
Bse8I	GATNNNNATC	2 cut(s)	306, 2238
BseAI	TCCGGA	2 cut(s)	158, 1334
BseBI	CCWGG	2 cut(s)	888, 1743
BseDI	CCNNGG	2 cut(s)	57, 384
BseGI	GGATG	8 cut(s)	698, 720, 1065, 1123, 2068, 2128, 2239, 2467
BseJI	GATNNNNATC	2 cut(s)	306, 2238
BseLI	CCNNNNNNNGG	5 cut(s)	284, 1135, 2245, 2308, 2309
BseMI	GCAATG	2 cut(s)	1438, 2331
BseMII	CTCAG	8 cut(s)	468, 518, 552, 605, 1241, 1488, 1565, 2499
BseNI	ACTGG	5 cut(s)	1211, 1464, 2228, 2243, 2374
BseRI	GAGGAG	6 cut(s)	131, 143, 276, 851, 1148, 1691
BseXI	GCAGC	6 cut(s)	714, 1633, 2280, 2333, 2419, 2438
BseYI	CCCAGC	4 cut(s)	140, 246, 1642, 2308
BshFI	GGCC	5 cut(s)	642, 1032, 1140, 1361, 1572
BshNI	GGYRCC	2 cut(s)	1938, 2203
BsiHKAI	GWGCWC	1 cut(s)	710
BsiHKCI	CYCGRG	1 cut(s)	369
BsiSI	CCGG	6 cut(s)	95, 159, 177, 488, 1033, 1335
BslFI	GGGAC	6 cut(s)	446, 562, 945, 966, 1259, 1479
BslI	CCNNNNNNNGG	5 cut(s)	284, 1135, 2245, 2308, 2309
BsmAI	GTCTC	3 cut(s)	94, 545, 1570
BsmFI	GGGAC	6 cut(s)	446, 562, 945, 966, 1259, 1479
BsnI	GGCC	5 cut(s)	642, 1032, 1140, 1361, 1572
Bso31I	GGTCTC	1 cut(s)	94
BsoBI	CYCGRG	1 cut(s)	369
Bsp119I	TTCGAA	2 cut(s)	194, 947
Bsp1286I	GDGCHC	1 cut(s)	710
Bsp13I	TCCGGA	2 cut(s)	158, 1334
Bsp143I	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
BspACI	CCGC	8 cut(s)	125, 180, 258, 414, 496, 724, 794, 1717
BspANI	GGCC	5 cut(s)	642, 1032, 1140, 1361, 1572
BspCNI	CTCAG	8 cut(s)	469, 517, 553, 606, 1242, 1489, 1566, 2500
BspEI	TCCGGA	2 cut(s)	158, 1334
BspHI	TCATGA	1 cut(s)	832
BspLI	GGNNCC	9 cut(s)	276, 501, 981, 982, 1180, 1333, 1940, 2074, 2205
BspMI	ACCTGC	2 cut(s)	742, 866
BspPI	GGATC	3 cut(s)	1326, 1339, 1815
BspT104I	TTCGAA	2 cut(s)	194, 947
BspT107I	GGYRCC	2 cut(s)	1938, 2203
BspTNI	GGTCTC	1 cut(s)	94
BsrBI	CCGCTC	2 cut(s)	125, 258
BsrDI	GCAATG	2 cut(s)	1438, 2331
BsrFI	RCCGGY	2 cut(s)	94, 487
BsrI	ACTGG	5 cut(s)	1211, 1464, 2228, 2243, 2374
BssAI	RCCGGY	2 cut(s)	94, 487
BssECI	CCNNGG	2 cut(s)	57, 384
BssMI	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
BssNAI	GTATAC	1 cut(s)	1454
BssNI	GRCGYC	2 cut(s)	98, 588
BssT1I	CCWWGG	2 cut(s)	57, 384
Bst1107I	GTATAC	1 cut(s)	1454
Bst2UI	CCWGG	2 cut(s)	888, 1743
Bst4CI	ACNGT	5 cut(s)	88, 1068, 1881, 2279, 2382
Bst6I	CTCTTC	2 cut(s)	1476, 2460
BstACI	GRCGYC	2 cut(s)	98, 588
BstBI	TTCGAA	2 cut(s)	194, 947
BstC8I	GCNNGC	3 cut(s)	96, 1854, 2515
BstEII	GGTNACC	1 cut(s)	1091
BstF5I	GGATG	8 cut(s)	698, 720, 1065, 1123, 2068, 2128, 2239, 2467
BstKTI	GATC	5 cut(s)	1334, 1503, 1810, 1918, 2050
BstMAI	GTCTC	3 cut(s)	94, 545, 1570
BstMBI	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
BstMWI	GCNNNNNNNGC	6 cut(s)	272, 493, 724, 847, 1703, 2481
BstNI	CCWGG	2 cut(s)	888, 1743
BstPI	GGTNACC	1 cut(s)	1091
BstSCI	CCNGG	3 cut(s)	886, 1032, 1741
BstSFI	CTRYAG	4 cut(s)	417, 851, 2093, 2500
BstV1I	GCAGC	6 cut(s)	714, 1633, 2280, 2333, 2419, 2438
BstV2I	GAAGAC	1 cut(s)	357
BstX2I	RGATCY	2 cut(s)	1331, 1807
BstXI	CCANNNNNNTGG	3 cut(s)	64, 391, 1104
BstYI	RGATCY	2 cut(s)	1331, 1807
BstZ17I	GTATAC	1 cut(s)	1454
BsuI	GTATCC	2 cut(s)	1151, 2041
BsuRI	GGCC	5 cut(s)	642, 1032, 1140, 1361, 1572
BtgZI	GCGATG	1 cut(s)	414
BtrI	CACGTC	1 cut(s)	1469
BtsCI	GGATG	8 cut(s)	698, 720, 1065, 1123, 2068, 2128, 2239, 2467
BtsI	GCAGTG	1 cut(s)	1205
BtsIMutI	CAGTG	7 cut(s)	558, 1088, 1205, 1218, 2222, 2250, 2505
BveI	ACCTGC	2 cut(s)	742, 866
Cac8I	GCNNGC	3 cut(s)	96, 1854, 2515
CciI	TCATGA	1 cut(s)	832
Cfr10I	RCCGGY	2 cut(s)	94, 487
Cfr13I	GGNCC	4 cut(s)	980, 1138, 2073, 2262
CseI	GACGC	2 cut(s)	87, 596
CsiI	ACCWGGT	1 cut(s)	1741
Csp6I	GTAC	4 cut(s)	1344, 1939, 2204, 2383
CviAII	CATG	1 cut(s)	833
CviQI	GTAC	4 cut(s)	1344, 1939, 2204, 2383
DpnI	GATC	5 cut(s)	1333, 1502, 1809, 1917, 2049
DpnII	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
DraI	TTTAAA	1 cut(s)	2454
DriI	GACNNNNNGTC	1 cut(s)	361
EaeI	YGGCCR	1 cut(s)	1030
Eam1104I	CTCTTC	2 cut(s)	1476, 2460
Eam1105I	GACNNNNNGTC	1 cut(s)	361
EarI	CTCTTC	2 cut(s)	1476, 2460
Eco130I	CCWWGG	2 cut(s)	57, 384
Eco31I	GGTCTC	1 cut(s)	94
Eco47I	GGWCC	3 cut(s)	980, 2073, 2262
Eco57I	CTGAAG	5 cut(s)	1286, 1413, 1848, 1911, 2464
Eco88I	CYCGRG	1 cut(s)	369
Eco91I	GGTNACC	1 cut(s)	1091
EcoO109I	RGGNCCY	2 cut(s)	980, 2073
EcoO65I	GGTNACC	1 cut(s)	1091
EcoRII	CCWGG	2 cut(s)	886, 1741
EcoT14I	CCWWGG	2 cut(s)	57, 384
ErhI	CCWWGG	2 cut(s)	57, 384
FaeI	CATG	1 cut(s)	836
FalI	AAGNNNNNCTT	2 cut(s)	1038, 1070
FaqI	GGGAC	6 cut(s)	446, 562, 945, 966, 1259, 1479
FatI	CATG	1 cut(s)	832
FauI	CCCGC	3 cut(s)	173, 421, 489
FauNDI	CATATG	2 cut(s)	1163, 2145
FbaI	TGATCA	1 cut(s)	1915
FblI	GTMKAC	3 cut(s)	1453, 1791, 1863
Fnu4HI	GCNGC	7 cut(s)	725, 728, 1647, 2269, 2322, 2408, 2427
FokI	GGATG	8 cut(s)	705, 727, 1072, 1130, 2075, 2115, 2226, 2474
Fsp4HI	GCNGC	7 cut(s)	725, 728, 1647, 2269, 2322, 2408, 2427
FspBI	CTAG	5 cut(s)	552, 711, 999, 1521, 2318
GluI	GCNGC	7 cut(s)	725, 728, 1647, 2269, 2322, 2408, 2427
GsaI	CCCAGC	4 cut(s)	144, 250, 1646, 2312
GsuI	CTGGAG	1 cut(s)	1481
HaeIII	GGCC	5 cut(s)	642, 1032, 1140, 1361, 1572
HapII	CCGG	6 cut(s)	95, 159, 177, 488, 1033, 1335
HgaI	GACGC	2 cut(s)	87, 596
Hin1I	GRCGYC	2 cut(s)	98, 588
Hin1II	CATG	1 cut(s)	836
HincII	GTYRAC	1 cut(s)	1777
HindII	GTYRAC	1 cut(s)	1777
HindIII	AAGCTT	1 cut(s)	1184
HinfI	GANTC	9 cut(s)	77, 307, 338, 440, 1269, 1366, 1691, 1925, 2161
HpaII	CCGG	6 cut(s)	95, 159, 177, 488, 1033, 1335
HphI	GGTGA	6 cut(s)	115, 230, 502, 766, 1120, 1634
Hpy166II	GTNNAC	6 cut(s)	558, 1419, 1454, 1777, 1792, 1864
Hpy188III	TCNNGA	8 cut(s)	159, 431, 833, 915, 1335, 1606, 1811, 2347
Hpy8I	GTNNAC	6 cut(s)	558, 1419, 1454, 1777, 1792, 1864
Hpy99I	CGWCG	3 cut(s)	88, 103, 1885
HpyCH4III	ACNGT	5 cut(s)	88, 1068, 1881, 2279, 2382
HpyCH4IV	ACGT	3 cut(s)	425, 1468, 2385
HpyCH4V	TGCA	8 cut(s)	4, 576, 1664, 1961, 1983, 2336, 2407, 2426
HpyF10VI	GCNNNNNNNGC	6 cut(s)	272, 493, 724, 847, 1703, 2481
HpySE526I	ACGT	3 cut(s)	425, 1468, 2385
Hsp92I	GRCGYC	2 cut(s)	98, 588
Hsp92II	CATG	1 cut(s)	836
KflI	GGGWCCC	1 cut(s)	980
Kpn2I	TCCGGA	2 cut(s)	158, 1334
KpnI	GGTACC	2 cut(s)	1942, 2207
KroI	GCCGGC	1 cut(s)	94
KroNI	GCCGGC	1 cut(s)	96
Ksp22I	TGATCA	1 cut(s)	1915
Kzo9I	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
LmnI	GCTCC	7 cut(s)	39, 179, 255, 263, 280, 499, 838
Lsp1109I	GCAGC	6 cut(s)	714, 1633, 2280, 2333, 2419, 2438
LweI	GCATC	7 cut(s)	683, 705, 1522, 1895, 2079, 2127, 2413
MabI	ACCWGGT	1 cut(s)	1741
MaeI	CTAG	5 cut(s)	552, 711, 999, 1521, 2318
MaeII	ACGT	3 cut(s)	425, 1468, 2385
MalI	GATC	5 cut(s)	1333, 1502, 1809, 1917, 2049
MbiI	CCGCTC	2 cut(s)	125, 258
MboI	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
MflI	RGATCY	2 cut(s)	1331, 1807
MhlI	GDGCHC	1 cut(s)	710
MluCI	AATT	6 cut(s)	164, 205, 799, 1038, 1308, 1727
MlyI	GAGTC	3 cut(s)	347, 1278, 1919
MmeI	TCCRAC	7 cut(s)	45, 54, 165, 1300, 1971, 1990, 2156
MreI	CGCCGGCG	1 cut(s)	94
MroI	TCCGGA	2 cut(s)	158, 1334
MroNI	GCCGGC	1 cut(s)	94
MseI	TTAA	5 cut(s)	1413, 1784, 2292, 2433, 2453
MslI	CAYNNNNRTG	3 cut(s)	809, 969, 1911
MspA1I	CMGCKG	2 cut(s)	416, 1646
MspI	CCGG	6 cut(s)	95, 159, 177, 488, 1033, 1335
MspR9I	CCNGG	3 cut(s)	888, 1034, 1743
MvaI	CCWGG	2 cut(s)	888, 1743
MwoI	GCNNNNNNNGC	6 cut(s)	272, 493, 724, 847, 1703, 2481
NaeI	GCCGGC	1 cut(s)	96
NciI	CCSGG	1 cut(s)	1034
NdeI	CATATG	2 cut(s)	1163, 2145
NdeII	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
NgoMIV	GCCGGC	1 cut(s)	94
NlaIII	CATG	1 cut(s)	836
NlaIV	GGNNCC	9 cut(s)	276, 501, 981, 982, 1180, 1333, 1940, 2074, 2205
NmuCI	GTSAC	4 cut(s)	421, 584, 1203, 2219
NspV	TTCGAA	2 cut(s)	194, 947
PagI	TCATGA	1 cut(s)	832
PaqCI	CACCTGC	1 cut(s)	742
PcsI	WCGNNNNNNNCGW	1 cut(s)	80
PdiI	GCCGGC	1 cut(s)	96
PfeI	GAWTC	6 cut(s)	77, 307, 440, 1366, 1691, 2161
PflMI	CCANNNNNTGG	1 cut(s)	2245
PkrI	GCNGC	7 cut(s)	726, 729, 1648, 2270, 2323, 2409, 2428
PleI	GAGTC	3 cut(s)	346, 1277, 1919
PpsI	GAGTC	3 cut(s)	346, 1277, 1919
PpuMI	RGGWCCY	2 cut(s)	980, 2073
PshBI	ATTAAT	1 cut(s)	2292
Psp5II	RGGWCCY	2 cut(s)	980, 2073
Psp6I	CCWGG	2 cut(s)	886, 1741
PspEI	GGTNACC	1 cut(s)	1091
PspFI	CCCAGC	4 cut(s)	140, 246, 1642, 2308
PspGI	CCWGG	2 cut(s)	886, 1741
PspN4I	GGNNCC	9 cut(s)	276, 501, 981, 982, 1180, 1333, 1940, 2074, 2205
PspPI	GGNCC	4 cut(s)	980, 1138, 2073, 2262
PspPPI	RGGWCCY	2 cut(s)	980, 2073
PsuI	RGATCY	2 cut(s)	1331, 1807
PvuII	CAGCTG	1 cut(s)	1646
RsaI	GTAC	4 cut(s)	1345, 1940, 2205, 2384
RsaNI	GTAC	4 cut(s)	1344, 1939, 2204, 2383
RseI	CAYNNNNRTG	3 cut(s)	809, 969, 1911
SaqAI	TTAA	5 cut(s)	1413, 1784, 2292, 2433, 2453
SatI	GCNGC	7 cut(s)	725, 728, 1647, 2269, 2322, 2408, 2427
Sau3AI	GATC	5 cut(s)	1331, 1500, 1807, 1915, 2047
Sau96I	GGNCC	4 cut(s)	980, 1138, 2073, 2262
ScaI	AGTACT	1 cut(s)	1345
SchI	GAGTC	3 cut(s)	347, 1278, 1919
ScrFI	CCNGG	3 cut(s)	888, 1034, 1743
SduI	GDGCHC	1 cut(s)	710
SexAI	ACCWGGT	1 cut(s)	1741
SfaNI	GCATC	7 cut(s)	683, 705, 1522, 1895, 2079, 2127, 2413
SfcI	CTRYAG	4 cut(s)	417, 851, 2093, 2500
SfuI	TTCGAA	2 cut(s)	194, 947
SgrAI	CRCCGGYG	1 cut(s)	94
SinI	GGWCC	3 cut(s)	980, 2073, 2262
SmiMI	CAYNNNNRTG	3 cut(s)	809, 969, 1911
SmlI	CTYRAG	5 cut(s)	542, 719, 1604, 2035, 2183
SmoI	CTYRAG	5 cut(s)	542, 719, 1604, 2035, 2183
Sse9I	AATT	6 cut(s)	164, 205, 799, 1038, 1308, 1727
SsiI	CCGC	8 cut(s)	125, 180, 258, 414, 496, 724, 794, 1717
SspI	AATATT	2 cut(s)	1411, 2438
SspMI	CTAG	5 cut(s)	552, 711, 999, 1521, 2318
StyD4I	CCNGG	3 cut(s)	886, 1032, 1741
StyI	CCWWGG	2 cut(s)	57, 384
TaaI	ACNGT	5 cut(s)	88, 1068, 1881, 2279, 2382
TaiI	ACGT	3 cut(s)	428, 1471, 2388
TaqI	TCGA	3 cut(s)	114, 194, 947
TaqII	GACCGA	1 cut(s)	2250
TasI	AATT	6 cut(s)	164, 205, 799, 1038, 1308, 1727
TatI	WGTACW	1 cut(s)	1343
TauI	GCSGC	1 cut(s)	727
TfiI	GAWTC	6 cut(s)	77, 307, 440, 1366, 1691, 2161
Tru1I	TTAA	5 cut(s)	1413, 1784, 2292, 2433, 2453
Tru9I	TTAA	5 cut(s)	1413, 1784, 2292, 2433, 2453
TscAI	CASTG	7 cut(s)	565, 1088, 1212, 1218, 2222, 2250, 2512
TseFI	GTSAC	4 cut(s)	421, 584, 1203, 2219
TseI	GCWGC	6 cut(s)	727, 1646, 2268, 2321, 2407, 2426
Tsp45I	GTSAC	4 cut(s)	421, 584, 1203, 2219
TspDTI	ATGAA	4 cut(s)	773, 1750, 1830, 2478
TspGWI	ACGGA	2 cut(s)	331, 351
TspRI	CASTG	7 cut(s)	565, 1088, 1212, 1218, 2222, 2250, 2512
Van91I	CCANNNNNTGG	1 cut(s)	2245
VpaK11BI	GGWCC	3 cut(s)	980, 2073, 2262
VspI	ATTAAT	1 cut(s)	2292
XapI	RAATTY	1 cut(s)	1308
XcmI	CCANNNNNNNNNTGG	3 cut(s)	388, 894, 971
XmiI	GTMKAC	3 cut(s)	1453, 1791, 1863
XspI	CTAG	5 cut(s)	552, 711, 999, 1521, 2318
ZrmI	AGTACT	1 cut(s)	1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.