Rroxscaffold_4G00289480

guanine nucleotide-binding protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
10096300 .. 10096683
384 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00289480.1

Sequence Viewer

Length: 285 bp
ATGACAGCAGCTTCAAGTAATTCATATGGGCTCTGTGATGGTAACATGCCTTGCTTGCCAATCTTCAGCTCTGCTACAAAGGCTTGTGAATCAAACCAACTGTCCTTCGCTGCGGGTACCGTTTTTGTGAATGGACAACCTCTTAGTCCTGAGGAGCTGTTTATACTACAAAAATGCCCAAACCCACCAAAGAAGCTAAGACCAGGAAACTATTGGTATGATAAAGATTGTGGACTTTGGGGAATGGTGAATATGACTTCTTTTAGGCGTTTCTTTAAGTTGTAA

Protein Analysis

94

Amino Acids

10.44

Weight (kDa)

8.68

Isoelectric Point (pI)

54.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 116
AciI CCGC 1 cut(s) 113
AcuI CTGAAG 1 cut(s) 49
AfaI GTAC 1 cut(s) 118
AgsI TTSAA 1 cut(s) 15
AjnI CCWGG 1 cut(s) 202
AluBI AGCT 4 cut(s) 11, 69, 157, 196
AluI AGCT 4 cut(s) 11, 69, 157, 196
ApeKI GCWGC 2 cut(s) 8, 110
ArsI GACNNNNNNTTYG 2 cut(s) 86, 118
Asp718I GGTACC 1 cut(s) 116
AsuHPI GGTGA 1 cut(s) 259
AxyI CCTNAGG 1 cut(s) 150
BanI GGYRCC 1 cut(s) 116
BanII GRGCYC 1 cut(s) 33
BbvI GCAGC 2 cut(s) 20, 97
BccI CCATC 1 cut(s) 32
BciT130I CCWGG 1 cut(s) 204
BisI GCNGC 2 cut(s) 9, 111
BlsI GCNGC 2 cut(s) 10, 112
Bme1390I CCNGG 1 cut(s) 204
BmiI GGNNCC 1 cut(s) 118
BmrFI CCNGG 1 cut(s) 204
Bse21I CCTNAGG 1 cut(s) 150
BseBI CCWGG 1 cut(s) 204
BseMII CTCAG 1 cut(s) 141
BseRI GAGGAG 1 cut(s) 167
BseXI GCAGC 2 cut(s) 20, 97
BshNI GGYRCC 1 cut(s) 116
Bsp1286I GDGCHC 1 cut(s) 33
BspACI CCGC 1 cut(s) 113
BspCNI CTCAG 1 cut(s) 142
BspLI GGNNCC 1 cut(s) 118
BspT107I GGYRCC 1 cut(s) 116
Bst2UI CCWGG 1 cut(s) 204
Bst4CI ACNGT 2 cut(s) 102, 121
BstC8I GCNNGC 1 cut(s) 56
BstDEI CTNAG 3 cut(s) 143, 150, 197
BstMWI GCNNNNNNNGC 2 cut(s) 55, 80
BstNI CCWGG 1 cut(s) 204
BstNSI RCATGY 1 cut(s) 49
BstSCI CCNGG 1 cut(s) 202
BstV1I GCAGC 2 cut(s) 20, 97
Bsu36I CCTNAGG 1 cut(s) 150
Cac8I GCNNGC 1 cut(s) 56
Csp6I GTAC 1 cut(s) 117
CviAII CATG 1 cut(s) 46
CviJI RGCY 6 cut(s) 11, 31, 69, 83, 157, 196
CviKI_1 RGCY 6 cut(s) 11, 31, 69, 83, 157, 196
CviQI GTAC 1 cut(s) 117
DdeI CTNAG 3 cut(s) 143, 150, 197
Eco24I GRGCYC 1 cut(s) 33
Eco57I CTGAAG 1 cut(s) 49
Eco81I CCTNAGG 1 cut(s) 150
EcoRII CCWGG 1 cut(s) 202
EcoT38I GRGCYC 1 cut(s) 33
FaeI CATG 1 cut(s) 49
FaiI YATR 6 cut(s) 25, 27, 47, 164, 219, 254
FatI CATG 1 cut(s) 45
FauI CCCGC 1 cut(s) 106
FauNDI CATATG 1 cut(s) 25
Fnu4HI GCNGC 2 cut(s) 9, 111
FriOI GRGCYC 1 cut(s) 33
Fsp4HI GCNGC 2 cut(s) 9, 111
GluI GCNGC 2 cut(s) 9, 111
Hin1II CATG 1 cut(s) 49
HinfI GANTC 1 cut(s) 89
HphI GGTGA 1 cut(s) 259
Hpy166II GTNNAC 1 cut(s) 233
Hpy188III TCNNGA 1 cut(s) 149
Hpy8I GTNNAC 1 cut(s) 233
HpyAV CCTTC 1 cut(s) 115
HpyCH4III ACNGT 2 cut(s) 102, 121
HpyF10VI GCNNNNNNNGC 2 cut(s) 55, 80
HpyF3I CTNAG 3 cut(s) 143, 150, 197
Hsp92II CATG 1 cut(s) 49
KpnI GGTACC 1 cut(s) 120
LmnI GCTCC 1 cut(s) 154
LpnPI CCDG 3 cut(s) 162, 189, 216
Lsp1109I GCAGC 2 cut(s) 20, 97
MaeIII GTNAC 1 cut(s) 41
MboII GAAGA 1 cut(s) 55
MhlI GDGCHC 1 cut(s) 33
MluCI AATT 1 cut(s) 19
MnlI CCTC 2 cut(s) 145, 150
MseI TTAA 1 cut(s) 276
MspR9I CCNGG 1 cut(s) 204
MvaI CCWGG 1 cut(s) 204
MwoI GCNNNNNNNGC 2 cut(s) 55, 80
NdeI CATATG 1 cut(s) 25
NlaIII CATG 1 cut(s) 49
NlaIV GGNNCC 1 cut(s) 118
NspI RCATGY 1 cut(s) 49
PfeI GAWTC 1 cut(s) 89
PkrI GCNGC 2 cut(s) 10, 112
Psp6I CCWGG 1 cut(s) 202
PspGI CCWGG 1 cut(s) 202
PspN4I GGNNCC 1 cut(s) 118
RsaI GTAC 1 cut(s) 118
RsaNI GTAC 1 cut(s) 117
SaqAI TTAA 1 cut(s) 276
SatI GCNGC 2 cut(s) 9, 111
ScrFI CCNGG 1 cut(s) 204
SduI GDGCHC 1 cut(s) 33
SetI ASST 5 cut(s) 13, 71, 142, 159, 198
SgeI CNNG 9 cut(s) 27, 58, 63, 67, 96, 126, 161, 215, 216
Sse9I AATT 1 cut(s) 19
SsiI CCGC 1 cut(s) 113
StyD4I CCNGG 1 cut(s) 202
TaaI ACNGT 2 cut(s) 102, 121
TasI AATT 1 cut(s) 19
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 1 cut(s) 276
Tru9I TTAA 1 cut(s) 276
TseI GCWGC 2 cut(s) 8, 110
TspDTI ATGAA 1 cut(s) 12
XceI RCATGY 1 cut(s) 49
XcmI CCANNNNNNNNNTGG 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.