Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011000.1

Orthogroup ID

OG0002708

Physical Location & Seq

Genomic Coordinates Forward (+)

59173 .. 68800

Gene Structure 9628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011000.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3042 bp

atgagtggtgggcttcgtacaagcgtgaaggggttccttaatgcaaaaagcctggctttgtctgcggaaacagatacagtgcatgagacgaatgagaccatcactcgcaatttcagtgcactccaagctgctgctgattctcgtgataagaagaaagcacaagagaagagcattgctttaacttcatatcgcctcagtatccatgatggttcaatgtgtacaggtgagatcttgctaagaagattcttctataatgaactgaaaacagcgacctggaactttcatccagataataaactgggtgaaggtagttttggtcctgtttttaaggggtgggttgatgacaatacatcaacatcttccaagcctggacctggcatgttaattgctgtcaagaccattaacctagaaggtttacagggaaggctgcatcatccaaatgttgtgaagttgttgggttattgcttcgagcatgaccaccggcttctggtttatgaatttatggctcatggaagcttggaggtttatctatttggatgggcttctcaccttcaaccactgtcgtggatcctgcgtatgaagattgcccttggcccgactggacccgcaactctaagctcggagaaggcgaacgccctcagatcggtgattgtcggagtcgaactcgaagcgattgtagttggtgtcgtagctgctggaggccataggctcaatcttggaaggcgcggaagaaacaaggcctggatcggttcgtcgtcgtcgcgcctctccccggaaatagtgacctgtattatttttgatgggtttgtttctgttgttgaagatataatttgtttcatagctattgagacaactatgactagtggtgggattcgaacaagcgtgaaggcctacattaatgagcagcgactcgcttctttggctctgaatcatgagaacaatgagggcatcaatacccatttggctccacttgcagaggctaccatggcagcagcttcaagtaattcatatgggctctgtgatggtaacatgccttgcttgcccattttgagctctgctacaaagtcttgtgtagcaaatcagctaccccaggccacagatactattagtgtgaatggacaacctcttagtcctgaagaactccgtacattacaaagctgcccaaacccaccaaagaagctaaaaccaggaaactattggtatgacaagatttgtggactttgggggaaggaaggacagaagccttcagaggtaatctctccccagctttgtgttgggggtcgcatgaaggaaaatgctagcaatggaagcacacaggtttttattaatggtcgggaaatcaccaaagtagagcttcggatgttgcagttggtgggagttcaatgtgctgggaatcaaaacttttgggtgtataaggatgggtcataccaggaggagggcatgtctaatgttaaaggatacatatggggcacggctggagcaaagcttgtctgtgccctcttgtcactgccggtcccttctaaatcttcaaatcccgccattcctgatatcattgagcagcaaactcttcagaagattcttatagttggatgcaatggatctggagctagtactatattcaaacaggccaagattctatatgaatctattcctttctcggtggatgaacgtgaaagtattaagtttacaatacaaagaaatgtgtatgggtatcttggtatactccttgaggttcgtgagcgttttgaagaggaatgtttggcagagatcaggaggcagcattcttcttgtcaatcagttgccagtggggacaacaacaaaaccccgtactccattggccagaagctgaaagcgtttgctgattggcttcttaagactgtggtgtcaggctatctggaaaacatcttccctgctgctacgcttgaatttgcaccctttgtggaggagttgtggaatgattcagccattcaggccacatacaagcggtcaagtgaactgggaatgctacctagtgttgctacttatttcataaagagggctgttcacatattaaaagtaaactatgagcccacgggttttgacatcctatatgctgaaggtgatacttcatctaatggattggcttgtatggacttctcattgccccattcagtaatgataaatgacttttatgatcatgatactactgatcagcatgaccctttgcataggtaccaacttattaaagtaaatgcacgacttggagaaagctgtgaatggttggagatgtttggagatgttggaatagtcatcttctgtgtatccttgagtgactatgatcaattttctgctgacggtaatgggacttccacaaacaagatactgcagagcagagctgtttttgagagaattgttaatcatccaacctttgagcagatgaactgccttttgcttctcaacgagtttgatttgtttgtgaaaaagatagcacgggtccctttaactcgatgcgagtggtttgatgattttaatccagtgattaatagtgacctgggtcatcgagcatttgagtatatagcagtaaagttcaagaggctttattcttctttaacagacaagagattgtatgtttcgctggtggaggactttgagcctggtaatgtacgtcaagctcttaaaaaaaagtcgactcttggaaagctgcatcaccaaaatcttgtgaagttgattggttattgctttgaggatgaccactggcttctggtgtatgaatttacacctcagcgtagcttgcttaaccatctatttggagatcagttgacccctgaacgtgatgtctatagttttgggattgttctgctggaactgttatctggcagacgagcttttgactttaaaaggccgcgaggagaaaaagatttagttcagttggtcaaggaattttctggcaagtcaatcagcaaatacgaagttgaccaaatttttgatgctcatattgaaggccagtaccctgagcttggagctcaaaaagcactggccctgtacttctatgcctgcaagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001664 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0004857 GO:0005095 GO:0005102 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005834 GO:0005886 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008150 GO:0009898 GO:0009987 GO:0016020 GO:0016247 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019897 GO:0019898 GO:0023052 GO:0030234 GO:0030695 GO:0031234 GO:0031683 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0034260 GO:0035639 GO:0036094 GO:0043086 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044877 GO:0048519 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051336 GO:0051346 GO:0051716 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0098772 GO:0098796 GO:0098797 GO:1901265 GO:1901363 GO:1902494 GO:1905360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-alpha

Protein Analysis

1013

Amino Acids

112.83

Weight (kDa)

6.44

Isoelectric Point (pI)

37.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23460
fragaria_vesca	FvH4_1g14590 FvH4_1g14590
malus_domestica	MD00G1067300.v1.1 MD02G1159500.v1.1
prunus_persica	Prupe.7G144400_v2.0.a1
pyrus_communis	pycom02g12580 pycom15g23720
rosa_chinensis	RchiOBHm_Chr1g0367271 RchiOBHm_Chr1g0367281 RchiOBHm_Chr1g0367331 RchiOBHm_Chr2g0103371
rosa_laevigata	RLG00000017231 RLG00000027279 RLG00000027284
rosa_multiflora	Rmu_sc0001555.1_g000003 Rmu_sc0002434.1_g000010 Rmu_sc0011000.1_g000013
rosa_roxburghii	Rroxscaffold_2G00139680 Rroxscaffold_4G00289390 Rroxscaffold_4G00289470 Rroxscaffold_4G00289480
rosa_rugosa	Rorug02G0114700 Rorug06G0002300
rosa_samantha	Rh1AG342600 Rh1BG303200 Rh1BG303600 Rh1BG303700 Rh1CG319500 Rh1CG319700 Rh1DG335600 Rh1DG336000 Rh1DG336100 Rh2AG162700 Rh2BG169800 Rh2CG169900 Rh2DG168800
rosa_wichuraiana	Rw1G030440 Rw2G012780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1882
Acc65I	GGTACC	1 cut(s)	2211
AccB1I	GGYRCC	1 cut(s)	2211
AccI	GTMKAC	2 cut(s)	1720, 2666
AccII	CGCG	3 cut(s)	726, 763, 2884
AciI	CCGC	6 cut(s)	65, 606, 726, 1536, 1984, 2882
AclWI	GGATC	4 cut(s)	562, 575, 752, 1606
AcoI	YGGCCR	1 cut(s)	1837
AcsI	RAATTY	5 cut(s)	497, 1925, 2750, 2918, 2958
AcuI	CTGAAG	4 cut(s)	1155, 1230, 1553, 2115
AfaI	GTAC	9 cut(s)	19, 220, 1147, 1612, 1829, 2213, 2643, 2987, 3023
AfiI	CCNNNNNNNGG	6 cut(s)	374, 487, 643, 772, 1435, 2996
AflII	CTTAAG	1 cut(s)	1871
AhlI	ACTAGT	1 cut(s)	860
AjuI	GAANNNNNNNTTGG	2 cut(s)	297, 329
AleI	CACNNNNGTG	1 cut(s)	562
Alw21I	GWGCWC	3 cut(s)	121, 1055, 3004
Alw26I	GTCTC	3 cut(s)	80, 89, 842
Alw44I	GTGCAC	1 cut(s)	117
AlwI	GGATC	4 cut(s)	562, 575, 752, 1606
AlwNI	CAGNNNCTG	1 cut(s)	1846
ApaLI	GTGCAC	1 cut(s)	117
ApoI	RAATTY	5 cut(s)	497, 1925, 2750, 2918, 2958
ArsI	GACNNNNNNTTYG	2 cut(s)	2945, 2977
AseI	ATTAAT	3 cut(s)	897, 1326, 2520
Asp700I	GAANNNNTTC	2 cut(s)	32, 1647
Asp718I	GGTACC	1 cut(s)	2211
AspLEI	GCGC	2 cut(s)	726, 765
AspS9I	GGNCC	7 cut(s)	317, 371, 593, 602, 1513, 2473, 3016
AsuC2I	CCSGG	1 cut(s)	773
AsuHPI	GGTGA	7 cut(s)	236, 314, 539, 658, 1333, 2111, 2678
AsuII	TTCGAA	1 cut(s)	874
AsuNHI	GCTAGC	1 cut(s)	1298
AvaII	GGWCC	5 cut(s)	317, 371, 602, 1513, 2473
BaeGI	GKGCMC	3 cut(s)	121, 1472, 1498
BalI	TGGCCA	1 cut(s)	1839
BamHI	GGATCC	1 cut(s)	567
BanI	GGYRCC	1 cut(s)	2211
BanII	GRGCYC	4 cut(s)	1017, 1055, 2070, 3004
BarI	GAAGNNNNNNTAC	2 cut(s)	2329, 2361
BauI	CACGAG	1 cut(s)	141
Bbv12I	GWGCWC	3 cut(s)	121, 1055, 3004
BbvCI	CCTCAGC	1 cut(s)	2760
BccI	CCATC	7 cut(s)	107, 200, 531, 794, 1016, 1412, 2787
BceAI	ACGGC	1 cut(s)	1488
BciVI	GTATCC	3 cut(s)	209, 1451, 2311
BclI	TGATCA	3 cut(s)	2173, 2188, 2317
BcnI	CCSGG	1 cut(s)	773
BcoDI	GTCTC	3 cut(s)	80, 89, 842
BcuI	ACTAGT	1 cut(s)	860
BfaI	CTAG	5 cut(s)	407, 861, 1299, 1608, 2010
BfmI	CTRYAG	2 cut(s)	2363, 2818
BfrI	CTTAAG	1 cut(s)	1871
BfuI	GTATCC	3 cut(s)	209, 1451, 2311
BglI	GCCNNNNNGGC	1 cut(s)	1970
BglII	AGATCT	1 cut(s)	228
BmcAI	AGTACT	1 cut(s)	1612
Bme18I	GGWCC	5 cut(s)	317, 371, 602, 1513, 2473
BmgT120I	GGNCC	7 cut(s)	317, 371, 593, 602, 1513, 2473, 3016
BmiI	GGNNCC	8 cut(s)	35, 569, 604, 966, 1515, 2213, 2474, 2475
BmrI	ACTGGG	2 cut(s)	308, 2006
BmsI	GCATC	6 cut(s)	439, 957, 1580, 2477, 2692, 2956
BmtI	GCTAGC	1 cut(s)	1302
BmuI	ACTGGG	2 cut(s)	308, 2006
BoxI	GACNNNNGTC	1 cut(s)	2532
BplI	GAGNNNNNCTC	4 cut(s)	648, 680, 1241, 1273
BpmI	CTGGAG	3 cut(s)	717, 1497, 1623
Bpu10I	CCTNAGC	2 cut(s)	2760, 2991
Bpu14I	TTCGAA	1 cut(s)	874
BpuEI	CTTGAG	2 cut(s)	1748, 2326
BpuMI	CCSGG	1 cut(s)	773
BsaBI	GATNNNNATC	1 cut(s)	2508
BsaI	GGTCTC	1 cut(s)	89
BsaJI	CCNNGG	6 cut(s)	589, 771, 984, 1089, 2070, 2530
BsaXI	ACNNNNNCTCC	4 cut(s)	1427, 1457, 1934, 1964
Bsc4I	CCNNNNNNNGG	6 cut(s)	374, 487, 643, 772, 1435, 2996
Bse118I	RCCGGY	2 cut(s)	480, 1510
Bse1I	ACTGG	8 cut(s)	303, 604, 1803, 2001, 2513, 2738, 2983, 3018
Bse3DI	GCAATG	4 cut(s)	171, 1309, 1600, 2138
Bse8I	GATNNNNATC	1 cut(s)	2508
BseDI	CCNNGG	6 cut(s)	589, 771, 984, 1089, 2070, 2530
BseJI	GATNNNNATC	1 cut(s)	2508
BseLI	CCNNNNNNNGG	6 cut(s)	374, 487, 643, 772, 1435, 2996
BseMI	GCAATG	4 cut(s)	171, 1309, 1600, 2138
BseMII	CTCAG	4 cut(s)	208, 652, 2774, 2982
BseNI	ACTGG	8 cut(s)	303, 604, 1803, 2001, 2513, 2738, 2983, 3018
BseRI	GAGGAG	3 cut(s)	1448, 1958, 2901
BseSI	GKGCMC	3 cut(s)	121, 1472, 1498
BseYI	CCCAGC	2 cut(s)	1263, 1388
Bsh1236I	CGCG	3 cut(s)	726, 763, 2884
BshNI	GGYRCC	1 cut(s)	2211
BsiHKAI	GWGCWC	3 cut(s)	121, 1055, 3004
BsiSI	CCGG	3 cut(s)	481, 773, 1511
BslFI	GGGAC	4 cut(s)	1499, 1823, 2356, 2459
BslI	CCNNNNNNNGG	6 cut(s)	374, 487, 643, 772, 1435, 2996
BsmAI	GTCTC	3 cut(s)	80, 89, 842
BsmBI	CGTCTC	1 cut(s)	80
BsmFI	GGGAC	4 cut(s)	1499, 1823, 2356, 2459
BsmI	GAATGC	2 cut(s)	1780, 2007
Bso31I	GGTCTC	1 cut(s)	89
Bsp119I	TTCGAA	1 cut(s)	874
Bsp1286I	GDGCHC	7 cut(s)	121, 1017, 1055, 1472, 1498, 2070, 3004
Bsp1407I	TGTACA	1 cut(s)	218
Bsp19I	CCATGG	1 cut(s)	984
BspACI	CCGC	6 cut(s)	65, 606, 726, 1536, 1984, 2882
BspCNI	CTCAG	4 cut(s)	207, 651, 2773, 2983
BspFNI	CGCG	3 cut(s)	726, 763, 2884
BspHI	TCATGA	2 cut(s)	931, 2176
BspLI	GGNNCC	8 cut(s)	35, 569, 604, 966, 1515, 2213, 2474, 2475
BspMAI	CTGCAG	1 cut(s)	2367
BspOI	GCTAGC	1 cut(s)	1302
BspPI	GGATC	4 cut(s)	562, 575, 752, 1606
BspQI	GCTCTTC	1 cut(s)	161
BspT104I	TTCGAA	1 cut(s)	874
BspT107I	GGYRCC	1 cut(s)	2211
BspTI	CTTAAG	1 cut(s)	1871
BspTNI	GGTCTC	1 cut(s)	89
BsrDI	GCAATG	4 cut(s)	171, 1309, 1600, 2138
BsrFI	RCCGGY	2 cut(s)	480, 1510
BsrGI	TGTACA	1 cut(s)	218
BsrI	ACTGG	8 cut(s)	303, 604, 1803, 2001, 2513, 2738, 2983, 3018
BssAI	RCCGGY	2 cut(s)	480, 1510
BssECI	CCNNGG	6 cut(s)	589, 771, 984, 1089, 2070, 2530
BssNAI	GTATAC	1 cut(s)	1721
BssSI	CACGAG	1 cut(s)	141
BssT1I	CCWWGG	2 cut(s)	589, 984
Bst1107I	GTATAC	1 cut(s)	1721
Bst2BI	CACGAG	1 cut(s)	141
Bst4CI	ACNGT	5 cut(s)	79, 561, 1879, 2336, 2847
Bst6I	CTCTTC	3 cut(s)	161, 1572, 1743
BstAFI	CTTAAG	1 cut(s)	1871
BstAUI	TGTACA	1 cut(s)	218
BstBI	TTCGAA	1 cut(s)	874
BstC8I	GCNNGC	4 cut(s)	1040, 1300, 2771, 3034
BstDEI	CTNAG	7 cut(s)	194, 236, 614, 638, 1127, 2760, 2991
BstDSI	CCRYGG	2 cut(s)	984, 2070
BstFNI	CGCG	3 cut(s)	726, 763, 2884
BstHHI	GCGC	2 cut(s)	726, 765
BstMAI	GTCTC	3 cut(s)	80, 89, 842
BstNSI	RCATGY	3 cut(s)	382, 1033, 1444
BstPAI	GACNNNNGTC	1 cut(s)	2532
BstSFI	CTRYAG	2 cut(s)	2363, 2818
BstSLI	GKGCMC	3 cut(s)	121, 1472, 1498
BstUI	CGCG	3 cut(s)	726, 763, 2884
BstX2I	RGATCY	3 cut(s)	228, 567, 1598
BstXI	CCANNNNNNTGG	2 cut(s)	564, 2786
BstYI	RGATCY	3 cut(s)	228, 567, 1598
BstZ17I	GTATAC	1 cut(s)	1721
BsuI	GTATCC	3 cut(s)	209, 1451, 2311
BtgI	CCRYGG	2 cut(s)	984, 2070
BtsI	GCAGTG	1 cut(s)	1505
BtsIMutI	CAGTG	8 cut(s)	84, 121, 557, 1505, 1810, 2520, 2731, 3011
Cac8I	GCNNGC	4 cut(s)	1040, 1300, 2771, 3034
CaiI	CAGNNNCTG	1 cut(s)	1846
CciI	TCATGA	2 cut(s)	931, 2176
CfoI	GCGC	2 cut(s)	726, 765
Cfr10I	RCCGGY	2 cut(s)	480, 1510
Cfr13I	GGNCC	7 cut(s)	317, 371, 593, 602, 1513, 2473, 3016
Csp6I	GTAC	9 cut(s)	18, 219, 1146, 1611, 1828, 2212, 2642, 2986, 3022
CspCI	CAANNNNNGTGG	4 cut(s)	1195, 1230, 2059, 2094
CviQI	GTAC	9 cut(s)	18, 219, 1146, 1611, 1828, 2212, 2642, 2986, 3022
DdeI	CTNAG	7 cut(s)	194, 236, 614, 638, 1127, 2760, 2991
DraI	TTTAAA	1 cut(s)	2875
DrdI	GACNNNNNNGTC	1 cut(s)	1882
DseDI	GACNNNNNNGTC	1 cut(s)	1882
EaeI	YGGCCR	1 cut(s)	1837
Eam1104I	CTCTTC	3 cut(s)	161, 1572, 1743
EarI	CTCTTC	3 cut(s)	161, 1572, 1743
Ecl136II	GAGCTC	2 cut(s)	1053, 3002
Eco130I	CCWWGG	2 cut(s)	589, 984
Eco147I	AGGCCT	2 cut(s)	740, 890
Eco24I	GRGCYC	4 cut(s)	1017, 1055, 2070, 3004
Eco31I	GGTCTC	1 cut(s)	89
Eco32I	GATATC	1 cut(s)	1549
Eco47I	GGWCC	5 cut(s)	317, 371, 602, 1513, 2473
Eco53kI	GAGCTC	2 cut(s)	1053, 3002
Eco57I	CTGAAG	4 cut(s)	1155, 1230, 1553, 2115
EcoICRI	GAGCTC	2 cut(s)	1053, 3002
EcoO109I	RGGNCCY	1 cut(s)	2473
EcoRV	GATATC	1 cut(s)	1549
EcoT14I	CCWWGG	2 cut(s)	589, 984
EcoT38I	GRGCYC	4 cut(s)	1017, 1055, 2070, 3004
ErhI	CCWWGG	2 cut(s)	589, 984
Esp3I	CGTCTC	1 cut(s)	80
FalI	AAGNNNNNCTT	4 cut(s)	40, 72, 1338, 1370
FaqI	GGGAC	4 cut(s)	1499, 1823, 2356, 2459
FauI	CCCGC	2 cut(s)	613, 1543
FauNDI	CATATG	2 cut(s)	1009, 1463
FbaI	TGATCA	3 cut(s)	2173, 2188, 2317
FblI	GTMKAC	2 cut(s)	1720, 2666
FriOI	GRGCYC	4 cut(s)	1017, 1055, 2070, 3004
FspBI	CTAG	5 cut(s)	407, 861, 1299, 1608, 2010
GlaI	GCGC	2 cut(s)	725, 764
GsaI	CCCAGC	2 cut(s)	1267, 1392
GsuI	CTGGAG	3 cut(s)	717, 1497, 1623
HapII	CCGG	3 cut(s)	481, 773, 1511
HhaI	GCGC	2 cut(s)	726, 765
Hin6I	GCGC	2 cut(s)	724, 763
HinP1I	GCGC	2 cut(s)	724, 763
HincII	GTYRAC	3 cut(s)	2667, 2799, 2953
HindII	GTYRAC	3 cut(s)	2667, 2799, 2953
HindIII	AAGCTT	2 cut(s)	514, 1484
HpaII	CCGG	3 cut(s)	481, 773, 1511
HphI	GGTGA	7 cut(s)	236, 314, 539, 658, 1333, 2111, 2678
Hpy188I	TCNGA	7 cut(s)	622, 641, 656, 927, 1249, 1359, 1572
Hpy99I	CGWCG	3 cut(s)	757, 760, 763
HpyCH4III	ACNGT	5 cut(s)	79, 561, 1879, 2336, 2847
HpyCH4IV	ACGT	3 cut(s)	1669, 2644, 2809
HpyF3I	CTNAG	7 cut(s)	194, 236, 614, 638, 1127, 2760, 2991
HpySE526I	ACGT	3 cut(s)	1669, 2644, 2809
HspAI	GCGC	2 cut(s)	724, 763
KflI	GGGWCCC	1 cut(s)	2473
KpnI	GGTACC	1 cut(s)	2215
Ksp22I	TGATCA	3 cut(s)	2173, 2188, 2317
LguI	GCTCTTC	1 cut(s)	161
LmnI	GCTCC	4 cut(s)	970, 1478, 1604, 2999
LweI	GCATC	6 cut(s)	439, 957, 1580, 2477, 2692, 2956
MaeI	CTAG	5 cut(s)	407, 861, 1299, 1608, 2010
MaeII	ACGT	3 cut(s)	1669, 2644, 2809
MaeIII	GTNAC	5 cut(s)	781, 1025, 1503, 2309, 2525
MflI	RGATCY	3 cut(s)	228, 567, 1598
MhlI	GDGCHC	7 cut(s)	121, 1017, 1055, 1472, 1498, 2070, 3004
MlsI	TGGCCA	1 cut(s)	1839
MluNI	TGGCCA	1 cut(s)	1839
MlyI	GAGTC	3 cut(s)	666, 903, 2662
MmeI	TCCRAC	5 cut(s)	634, 1567, 2241, 2260, 2426
Mox20I	TGGCCA	1 cut(s)	1839
MroXI	GAANNNNTTC	2 cut(s)	32, 1647
MscI	TGGCCA	1 cut(s)	1839
MslI	CAYNNNNRTG	2 cut(s)	438, 562
Msp20I	TGGCCA	1 cut(s)	1839
MspCI	CTTAAG	1 cut(s)	1871
MspI	CCGG	3 cut(s)	481, 773, 1511
Mva1269I	GAATGC	2 cut(s)	1780, 2007
MvnI	CGCG	3 cut(s)	726, 763, 2884
NciI	CCSGG	1 cut(s)	773
NcoI	CCATGG	1 cut(s)	984
NdeI	CATATG	2 cut(s)	1009, 1463
NheI	GCTAGC	1 cut(s)	1298
NlaIV	GGNNCC	8 cut(s)	35, 569, 604, 966, 1515, 2213, 2474, 2475
NmuCI	GTSAC	4 cut(s)	781, 1503, 2309, 2525
NspI	RCATGY	3 cut(s)	382, 1033, 1444
NspV	TTCGAA	1 cut(s)	874
OliI	CACNNNNGTG	1 cut(s)	562
PagI	TCATGA	2 cut(s)	931, 2176
PceI	AGGCCT	2 cut(s)	740, 890
PciSI	GCTCTTC	1 cut(s)	161
PcsI	WCGNNNNNNNCGW	1 cut(s)	626
PctI	GAATGC	2 cut(s)	1780, 2007
PdmI	GAANNNNTTC	2 cut(s)	32, 1647
PfeI	GAWTC	9 cut(s)	137, 243, 871, 928, 1393, 1576, 1633, 1643, 1958
PleI	GAGTC	3 cut(s)	665, 903, 2662
PpsI	GAGTC	3 cut(s)	665, 903, 2662
PpuMI	RGGWCCY	1 cut(s)	2473
PshAI	GACNNNNGTC	1 cut(s)	2532
PshBI	ATTAAT	3 cut(s)	897, 1326, 2520
Psp124BI	GAGCTC	2 cut(s)	1055, 3004
Psp5II	RGGWCCY	1 cut(s)	2473
PspFI	CCCAGC	2 cut(s)	1263, 1388
PspN4I	GGNNCC	8 cut(s)	35, 569, 604, 966, 1515, 2213, 2474, 2475
PspPI	GGNCC	7 cut(s)	317, 371, 593, 602, 1513, 2473, 3016
PspPPI	RGGWCCY	1 cut(s)	2473
PstI	CTGCAG	1 cut(s)	2367
PstNI	CAGNNNCTG	1 cut(s)	1846
PsuI	RGATCY	3 cut(s)	228, 567, 1598
RsaI	GTAC	9 cut(s)	19, 220, 1147, 1612, 1829, 2213, 2643, 2987, 3023
RsaNI	GTAC	9 cut(s)	18, 219, 1146, 1611, 1828, 2212, 2642, 2986, 3022
RseI	CAYNNNNRTG	2 cut(s)	438, 562
SacI	GAGCTC	2 cut(s)	1055, 3004
SalI	GTCGAC	1 cut(s)	2665
SapI	GCTCTTC	1 cut(s)	161
Sau96I	GGNCC	7 cut(s)	317, 371, 593, 602, 1513, 2473, 3016
ScaI	AGTACT	1 cut(s)	1612
SchI	GAGTC	3 cut(s)	666, 903, 2662
SduI	GDGCHC	7 cut(s)	121, 1017, 1055, 1472, 1498, 2070, 3004
SfaNI	GCATC	6 cut(s)	439, 957, 1580, 2477, 2692, 2956
SfcI	CTRYAG	2 cut(s)	2363, 2818
SfuI	TTCGAA	1 cut(s)	874
SinI	GGWCC	5 cut(s)	317, 371, 602, 1513, 2473
SmiMI	CAYNNNNRTG	2 cut(s)	438, 562
SmlI	CTYRAG	3 cut(s)	1727, 1871, 2305
SmoI	CTYRAG	3 cut(s)	1727, 1871, 2305
SpeI	ACTAGT	1 cut(s)	860
SseBI	AGGCCT	2 cut(s)	740, 890
SsiI	CCGC	6 cut(s)	65, 606, 726, 1536, 1984, 2882
SspMI	CTAG	5 cut(s)	407, 861, 1299, 1608, 2010
SstI	GAGCTC	2 cut(s)	1055, 3004
StuI	AGGCCT	2 cut(s)	740, 890
StyI	CCWWGG	2 cut(s)	589, 984
TaaI	ACNGT	5 cut(s)	79, 561, 1879, 2336, 2847
TaiI	ACGT	3 cut(s)	1672, 2647, 2812
TaqI	TCGA	7 cut(s)	468, 660, 666, 874, 2485, 2539, 2666
TatI	WGTACW	3 cut(s)	218, 1610, 3021
TauI	GCSGC	1 cut(s)	2884
TfiI	GAWTC	9 cut(s)	137, 243, 871, 928, 1393, 1576, 1633, 1643, 1958
TscAI	CASTG	8 cut(s)	84, 121, 564, 1512, 1810, 2520, 2738, 3018
TseFI	GTSAC	4 cut(s)	781, 1503, 2309, 2525
Tsp45I	GTSAC	4 cut(s)	781, 1503, 2309, 2525
TspGWI	ACGGA	1 cut(s)	1133
TspRI	CASTG	8 cut(s)	84, 121, 564, 1512, 1810, 2520, 2738, 3018
Vha464I	CTTAAG	1 cut(s)	1871
VneI	GTGCAC	1 cut(s)	117
VpaK11BI	GGWCC	5 cut(s)	317, 371, 602, 1513, 2473
VspI	ATTAAT	3 cut(s)	897, 1326, 2520
XapI	RAATTY	5 cut(s)	497, 1925, 2750, 2918, 2958
XceI	RCATGY	3 cut(s)	382, 1033, 1444
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1194, 1271
XmiI	GTMKAC	2 cut(s)	1720, 2666
XmnI	GAANNNNTTC	2 cut(s)	32, 1647
XspI	CTAG	5 cut(s)	407, 861, 1299, 1608, 2010
ZrmI	AGTACT	1 cut(s)	1612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.