Rw2G012780

guanine nucleotide-binding protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
13381123 .. 13386253
5131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G012780.1

Sequence Viewer

Length: 981 bp
ATGCCGCCCGAGGCGGAAGAAGCGGAGGAGGGGGCGCAGTACTCGTTTGCTATGGAGTACAAAGGTCCTCCGGTGAGTTACGATCTTCCGAAGGCGGTTCCGATCAACGTCGACAGAATCCCCGTCGCGGCTGTCGTCGGACAGGTGTCTATTCCGGATAAGTTGTCGTTGCCGGTGGTCCAGCCGGTTCTCGCGCCCGGTTCGCTGATGAAAACGTTCTCCAAAGAGCTCAAGGCTTCCCAGTCGACGGTGTCTCCGACCTCGGTGATCGCTTTCGATCGGAGGAGCGAGGACGACACGACCAAGGAGTTGGAAGGGTCGGAATCGGCGACGGTCTCGCCGGCGTCGGTGATTGGGTTCGAGGAGAGAGCGGAGGAGAGGGGGGCTGGCTGTGGTGCTTTGTCCGGAGAATTGAGTAGCTCCGGCGGGTTGGAGTTTTCGAACGGGTTGAATTACGGGTCGGGTGAGCTGTCCGATGTGAATAATGGTAGCTGGGCTTGGAGCGGAGGAGCATTGACGGCTCCGAGTGGTGGGAAGGAGAGTTTGGATTTGAATCAACCCGAACCCGATTGGGCTTCCTCCGAGTCCGTTTTGAGCTTGGACTATCCGTCTTCTCGGGTTTCCTCCACCAAGGCTGTGGATTGCGATGTGAAACGACCCGCTGTAGTGACGTTTCGGGACATTGAATCTGATGATGATGACGATGGTGTTGAGGAAGATGAGGCTGAGGTTGTGCCGGTGAAGCGGGAGCCTCAGAGCAAAGGAAAGAAGAAGTCTTGTTATAGATGTCTCAAGGGGACTAGGTTCACTGAGAAGGAGGTGTGCATTGTTTGTGACGCCAAGTATTGTAGTAGTTGTGTTCTGAGAGCTATGGGGTCTATGCCCGAAGGCCGAAAATGTGTTACTTGTATTGGATTTCCTATTGATGAGAACAAAAGAGGATGCTTGGGGAAGTGCTCTAGATGCTCAAGCGGCTGCTGA

Protein Analysis

326

Amino Acids

34.63

Weight (kDa)

4.66

Isoelectric Point (pI)

54.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 371, 504
AccI GTMKAC 2 cut(s) 111, 245
AccII CGCG 2 cut(s) 128, 194
AccIII TCCGGA 2 cut(s) 154, 404
AclI AACGTT 1 cut(s) 215
AcyI GRCGYC 2 cut(s) 344, 837
AfaI GTAC 2 cut(s) 41, 59
AfiI CCNNNNNNNGG 3 cut(s) 127, 247, 530
AgsI TTSAA 3 cut(s) 451, 553, 686
AhdI GACNNNNNGTC 1 cut(s) 607
AjuI GAANNNNNNNTTGG 2 cut(s) 527, 559
AluBI AGCT 6 cut(s) 229, 420, 469, 492, 597, 869
AluI AGCT 6 cut(s) 229, 420, 469, 492, 597, 869
Alw21I GWGCWC 2 cut(s) 231, 959
Alw26I GTCTC 3 cut(s) 258, 340, 794
Ama87I CYCGRG 2 cut(s) 8, 615
Aor13HI TCCGGA 2 cut(s) 154, 404
AoxI GGCC 1 cut(s) 889
ApeKI GCWGC 1 cut(s) 975
Asp700I GAANNNNTTC 1 cut(s) 215
AspLEI GCGC 2 cut(s) 37, 196
AspS9I GGNCC 2 cut(s) 65, 178
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 5 cut(s) 85, 277, 361, 476, 751
AsuII TTCGAA 1 cut(s) 440
AvaI CYCGRG 2 cut(s) 8, 615
AvaII GGWCC 2 cut(s) 65, 178
BanII GRGCYC 1 cut(s) 231
BbsI GAAGAC 1 cut(s) 603
Bbv12I GWGCWC 2 cut(s) 231, 959
BbvCI CCTCAGC 1 cut(s) 726
BbvI GCAGC 1 cut(s) 962
BccI CCATC 1 cut(s) 698
BceAI ACGGC 1 cut(s) 534
BcnI CCSGG 1 cut(s) 198
BcoDI GTCTC 3 cut(s) 258, 340, 794
BfaI CTAG 2 cut(s) 801, 960
BfmI CTRYAG 1 cut(s) 663
BisI GCNGC 4 cut(s) 5, 129, 973, 976
BlsI GCNGC 4 cut(s) 6, 130, 974, 977
BmcAI AGTACT 1 cut(s) 41
Bme1390I CCNGG 1 cut(s) 198
Bme18I GGWCC 2 cut(s) 65, 178
BmeRI GACNNNNNGTC 1 cut(s) 607
BmeT110I CYCGRG 2 cut(s) 8, 615
BmgT120I GGNCC 2 cut(s) 65, 178
BmiI GGNNCC 3 cut(s) 99, 522, 750
BmrFI CCNGG 1 cut(s) 198
BmrI ACTGGG 1 cut(s) 235
BmsI GCATC 2 cut(s) 932, 953
BmuI ACTGGG 1 cut(s) 235
BoxI GACNNNNGTC 1 cut(s) 145
BpiI GAAGAC 1 cut(s) 603
Bpu10I CCTNAGC 1 cut(s) 726
Bpu14I TTCGAA 1 cut(s) 440
BpuEI CTTGAG 3 cut(s) 215, 776, 952
BpuMI CCSGG 1 cut(s) 198
BsaBI GATNNNNATC 1 cut(s) 552
BsaHI GRCGYC 2 cut(s) 344, 837
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 4 cut(s) 9, 261, 303, 630
BsaWI WCCGGW 3 cut(s) 70, 154, 404
BsaXI ACNNNNNCTCC 2 cut(s) 238, 268
Bsc4I CCNNNNNNNGG 3 cut(s) 127, 247, 530
Bse118I RCCGGY 4 cut(s) 172, 184, 340, 736
Bse1I ACTGG 1 cut(s) 241
Bse8I GATNNNNATC 1 cut(s) 552
BseAI TCCGGA 2 cut(s) 154, 404
BseDI CCNNGG 4 cut(s) 9, 261, 303, 630
BseGI GGATG 1 cut(s) 947
BseJI GATNNNNATC 1 cut(s) 552
BseLI CCNNNNNNNGG 3 cut(s) 127, 247, 530
BseMII CTCAG 4 cut(s) 717, 767, 801, 854
BseNI ACTGG 1 cut(s) 241
BseRI GAGGAG 5 cut(s) 41, 298, 377, 389, 522
BseXI GCAGC 1 cut(s) 962
BseYI CCCAGC 1 cut(s) 492
Bsh1236I CGCG 2 cut(s) 128, 194
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 1 cut(s) 891
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 2 cut(s) 231, 959
BsiHKCI CYCGRG 2 cut(s) 8, 615
BsiSI CCGG 9 cut(s) 71, 155, 173, 185, 198, 341, 405, 423, 737
BslFI GGGAC 2 cut(s) 692, 811
BslI CCNNNNNNNGG 3 cut(s) 127, 247, 530
BsmAI GTCTC 3 cut(s) 258, 340, 794
BsmFI GGGAC 2 cut(s) 692, 811
BsnI GGCC 1 cut(s) 891
Bso31I GGTCTC 1 cut(s) 340
BsoBI CYCGRG 2 cut(s) 8, 615
Bsp119I TTCGAA 1 cut(s) 440
Bsp1286I GDGCHC 2 cut(s) 231, 959
Bsp13I TCCGGA 2 cut(s) 154, 404
Bsp143I GATC 4 cut(s) 82, 102, 267, 277
BspANI GGCC 1 cut(s) 891
BspCNI CTCAG 4 cut(s) 718, 766, 802, 855
BspEI TCCGGA 2 cut(s) 154, 404
BspFNI CGCG 2 cut(s) 128, 194
BspLI GGNNCC 3 cut(s) 99, 522, 750
BspT104I TTCGAA 1 cut(s) 440
BspTNI GGTCTC 1 cut(s) 340
BsrBI CCGCTC 2 cut(s) 371, 504
BsrFI RCCGGY 4 cut(s) 172, 184, 340, 736
BsrI ACTGG 1 cut(s) 241
BssAI RCCGGY 4 cut(s) 172, 184, 340, 736
BssECI CCNNGG 4 cut(s) 9, 261, 303, 630
BssMI GATC 4 cut(s) 82, 102, 267, 277
BssNI GRCGYC 2 cut(s) 344, 837
BssT1I CCWWGG 2 cut(s) 303, 630
Bst4CI ACNGT 2 cut(s) 250, 334
BstACI GRCGYC 2 cut(s) 344, 837
BstBI TTCGAA 1 cut(s) 440
BstC8I GCNNGC 2 cut(s) 342, 388
BstDEI CTNAG 4 cut(s) 726, 753, 810, 863
BstF5I GGATG 1 cut(s) 947
BstFNI CGCG 2 cut(s) 128, 194
BstHHI GCGC 2 cut(s) 37, 196
BstKTI GATC 4 cut(s) 85, 105, 270, 280
BstMAI GTCTC 3 cut(s) 258, 340, 794
BstMBI GATC 4 cut(s) 82, 102, 267, 277
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 6 cut(s) 20, 202, 518, 742, 963, 972
BstPAI GACNNNNGTC 1 cut(s) 145
BstSCI CCNGG 1 cut(s) 196
BstSFI CTRYAG 1 cut(s) 663
BstUI CGCG 2 cut(s) 128, 194
BstV1I GCAGC 1 cut(s) 962
BstV2I GAAGAC 1 cut(s) 603
BstXI CCANNNNNNTGG 2 cut(s) 310, 637
BsuRI GGCC 1 cut(s) 891
BtgZI GCGATG 1 cut(s) 660
BtsCI GGATG 1 cut(s) 947
BtsIMutI CAGTG 1 cut(s) 807
Cac8I GCNNGC 2 cut(s) 342, 388
CfoI GCGC 2 cut(s) 37, 196
Cfr10I RCCGGY 4 cut(s) 172, 184, 340, 736
Cfr13I GGNCC 2 cut(s) 65, 178
CseI GACGC 2 cut(s) 333, 845
Csp6I GTAC 2 cut(s) 40, 58
CviQI GTAC 2 cut(s) 40, 58
DdeI CTNAG 4 cut(s) 726, 753, 810, 863
DpnI GATC 4 cut(s) 84, 104, 269, 279
DpnII GATC 4 cut(s) 82, 102, 267, 277
DriI GACNNNNNGTC 1 cut(s) 607
Eam1105I GACNNNNNGTC 1 cut(s) 607
EciI GGCGGA 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 229
Eco130I CCWWGG 2 cut(s) 303, 630
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 340
Eco47I GGWCC 2 cut(s) 65, 178
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 2 cut(s) 8, 615
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 65
EcoT14I CCWWGG 2 cut(s) 303, 630
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 303, 630
FaiI YATR 4 cut(s) 53, 783, 872, 881
FaqI GGGAC 2 cut(s) 692, 811
FauI CCCGC 3 cut(s) 419, 667, 738
FblI GTMKAC 2 cut(s) 111, 245
Fnu4HI GCNGC 4 cut(s) 5, 129, 973, 976
FokI GGATG 1 cut(s) 954
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 4 cut(s) 5, 129, 973, 976
FspBI CTAG 2 cut(s) 801, 960
GlaI GCGC 2 cut(s) 36, 195
GluI GCNGC 4 cut(s) 5, 129, 973, 976
GsaI CCCAGC 1 cut(s) 496
HaeIII GGCC 1 cut(s) 891
HapII CCGG 9 cut(s) 71, 155, 173, 185, 198, 341, 405, 423, 737
HgaI GACGC 2 cut(s) 333, 845
HhaI GCGC 2 cut(s) 37, 196
Hin1I GRCGYC 2 cut(s) 344, 837
Hin6I GCGC 2 cut(s) 35, 194
HinP1I GCGC 2 cut(s) 35, 194
HincII GTYRAC 2 cut(s) 112, 246
HindII GTYRAC 2 cut(s) 112, 246
HinfI GANTC 5 cut(s) 117, 323, 553, 584, 686
HpaII CCGG 9 cut(s) 71, 155, 173, 185, 198, 341, 405, 423, 737
HphI GGTGA 5 cut(s) 85, 277, 361, 476, 751
Hpy166II GTNNAC 3 cut(s) 112, 246, 807
Hpy188III TCNNGA 4 cut(s) 155, 405, 677, 960
Hpy8I GTNNAC 3 cut(s) 112, 246, 807
Hpy99I CGWCG 6 cut(s) 113, 128, 140, 250, 334, 349
HpyAV CCTTC 5 cut(s) 85, 308, 529, 808, 881
HpyCH4III ACNGT 2 cut(s) 250, 334
HpyCH4IV ACGT 3 cut(s) 108, 215, 671
HpyCH4V TGCA 1 cut(s) 825
HpyF10VI GCNNNNNNNGC 6 cut(s) 20, 202, 518, 742, 963, 972
HpyF3I CTNAG 4 cut(s) 726, 753, 810, 863
HpySE526I ACGT 3 cut(s) 108, 215, 671
Hsp92I GRCGYC 2 cut(s) 344, 837
HspAI GCGC 2 cut(s) 35, 194
Kpn2I TCCGGA 2 cut(s) 154, 404
KroI GCCGGC 1 cut(s) 340
KroNI GCCGGC 1 cut(s) 342
Kzo9I GATC 4 cut(s) 82, 102, 267, 277
LmnI GCTCC 6 cut(s) 285, 425, 501, 509, 526, 748
Lsp1109I GCAGC 1 cut(s) 962
LweI GCATC 2 cut(s) 932, 953
MaeI CTAG 2 cut(s) 801, 960
MaeII ACGT 3 cut(s) 108, 215, 671
MaeIII GTNAC 4 cut(s) 77, 667, 833, 901
MalI GATC 4 cut(s) 84, 104, 269, 279
MbiI CCGCTC 2 cut(s) 371, 504
MboI GATC 4 cut(s) 82, 102, 267, 277
MboII GAAGA 5 cut(s) 29, 77, 603, 728, 781
MhlI GDGCHC 2 cut(s) 231, 959
MluCI AATT 2 cut(s) 410, 451
MlyI GAGTC 1 cut(s) 593
MmeI TCCRAC 5 cut(s) 118, 281, 291, 300, 411
MreI CGCCGGCG 1 cut(s) 340
MroI TCCGGA 2 cut(s) 154, 404
MroNI GCCGGC 1 cut(s) 340
MroXI GAANNNNTTC 1 cut(s) 215
MspA1I CMGCKG 1 cut(s) 662
MspI CCGG 9 cut(s) 71, 155, 173, 185, 198, 341, 405, 423, 737
MspR9I CCNGG 1 cut(s) 198
MvnI CGCG 2 cut(s) 128, 194
MwoI GCNNNNNNNGC 6 cut(s) 20, 202, 518, 742, 963, 972
NaeI GCCGGC 1 cut(s) 342
NciI CCSGG 1 cut(s) 198
NdeII GATC 4 cut(s) 82, 102, 267, 277
NgoMIV GCCGGC 1 cut(s) 340
NlaIV GGNNCC 3 cut(s) 99, 522, 750
NmuCI GTSAC 2 cut(s) 667, 833
NspV TTCGAA 1 cut(s) 440
PcsI WCGNNNNNNNCGW 3 cut(s) 132, 254, 326
PdiI GCCGGC 1 cut(s) 342
PdmI GAANNNNTTC 1 cut(s) 215
PfeI GAWTC 4 cut(s) 117, 323, 553, 686
PflFI GACNNNGTC 1 cut(s) 250
PkrI GCNGC 4 cut(s) 6, 130, 974, 977
Ple19I CGATCG 1 cut(s) 280
PleI GAGTC 1 cut(s) 592
PpsI GAGTC 1 cut(s) 592
PpuMI RGGWCCY 1 cut(s) 65
PshAI GACNNNNGTC 1 cut(s) 145
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 215
Psp5II RGGWCCY 1 cut(s) 65
PspFI CCCAGC 1 cut(s) 492
PspN4I GGNNCC 3 cut(s) 99, 522, 750
PspPI GGNCC 2 cut(s) 65, 178
PspPPI RGGWCCY 1 cut(s) 65
PsyI GACNNNGTC 1 cut(s) 250
PvuI CGATCG 1 cut(s) 280
RsaI GTAC 2 cut(s) 41, 59
RsaNI GTAC 2 cut(s) 40, 58
SacI GAGCTC 1 cut(s) 231
SalI GTCGAC 2 cut(s) 110, 244
SatI GCNGC 4 cut(s) 5, 129, 973, 976
Sau3AI GATC 4 cut(s) 82, 102, 267, 277
Sau96I GGNCC 2 cut(s) 65, 178
ScaI AGTACT 1 cut(s) 41
SchI GAGTC 1 cut(s) 593
ScrFI CCNGG 1 cut(s) 198
SduI GDGCHC 2 cut(s) 231, 959
SfaNI GCATC 2 cut(s) 932, 953
SfcI CTRYAG 1 cut(s) 663
SfuI TTCGAA 1 cut(s) 440
SgrAI CRCCGGYG 1 cut(s) 340
SinI GGWCC 2 cut(s) 65, 178
SmlI CTYRAG 3 cut(s) 230, 791, 967
SmoI CTYRAG 3 cut(s) 230, 791, 967
Sse9I AATT 2 cut(s) 410, 451
SspMI CTAG 2 cut(s) 801, 960
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 1 cut(s) 196
StyI CCWWGG 2 cut(s) 303, 630
TaaI ACNGT 2 cut(s) 250, 334
TaiI ACGT 3 cut(s) 111, 218, 674
TaqI TCGA 5 cut(s) 111, 245, 276, 360, 440
TasI AATT 2 cut(s) 410, 451
TatI WGTACW 2 cut(s) 39, 57
TauI GCSGC 3 cut(s) 7, 131, 975
TfiI GAWTC 4 cut(s) 117, 323, 553, 686
TscAI CASTG 1 cut(s) 814
TseFI GTSAC 2 cut(s) 667, 833
TseI GCWGC 1 cut(s) 975
Tsp45I GTSAC 2 cut(s) 667, 833
TspDTI ATGAA 1 cut(s) 224
TspGWI ACGGA 2 cut(s) 577, 597
TspRI CASTG 1 cut(s) 814
Tth111I GACNNNGTC 1 cut(s) 250
VpaK11BI GGWCC 2 cut(s) 65, 178
XbaI TCTAGA 1 cut(s) 959
XcmI CCANNNNNNNNNTGG 1 cut(s) 634
XmiI GTMKAC 2 cut(s) 111, 245
XmnI GAANNNNTTC 1 cut(s) 215
XspI CTAG 2 cut(s) 801, 960
ZrmI AGTACT 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.