Polyubiquitin-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g03990 FvH4_4g03992 |
| malus_domestica | MD16G1221600.v1.1 |
| prunus_persica | Prupe.1G041900_v2.0.a1 Prupe.1G042000_v2.0.a1 |
| pyrus_communis | pycom13g18970 |
| rosa_chinensis | RchiOBHm_Chr4g0394221 RchiOBHm_Chr4g0394231 RchiOBHm_Chr4g0394241 |
| rosa_laevigata | RLG00000009712 |
| rosa_multiflora | Rmu_co7959593.1_g000001 Rmu_co8171576.1_g000001 Rmu_sc0000295.1_g000005 Rmu_sc0007246.1_g000006 Rmu_sc0007246.1_g000007 Rmu_sc0024069.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00339280 Rroxscaffold_5G00339290 |
| rosa_samantha | Rh4AG050900 Rh4AG051000 Rh4BG047800 Rh4BG047900 Rh4BG048000 Rh4CG054500 Rh4CG054600 Rh4CG054700 Rh4DG047500 Rh4DG047700 |
| rosa_wichuraiana | Rw4G004050 Rw4G004060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 29, 202, 485 |
| AdeI | CACNNNGTG | 1 cut(s) | 470 |
| AfaI | GTAC | 3 cut(s) | 275, 338, 506 |
| AgsI | TTSAA | 8 cut(s) | 19, 25, 44, 137, 263, 313, 368, 491 |
| AjnI | CCWGG | 1 cut(s) | 96 |
| AoxI | GGCC | 1 cut(s) | 384 |
| ApoI | RAATTY | 3 cut(s) | 29, 202, 485 |
| AsuHPI | GGTGA | 1 cut(s) | 188 |
| AsuII | TTCGAA | 1 cut(s) | 400 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 132, 164 |
| BbsI | GAAGAC | 1 cut(s) | 147 |
| BccI | CCATC | 1 cut(s) | 244 |
| BciT130I | CCWGG | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 1 cut(s) | 98 |
| BmiI | GGNNCC | 2 cut(s) | 102, 177 |
| BmrFI | CCNGG | 1 cut(s) | 98 |
| BmrI | ACTGGG | 1 cut(s) | 174 |
| BmsI | GCATC | 1 cut(s) | 330 |
| BmuI | ACTGGG | 1 cut(s) | 174 |
| BpiI | GAAGAC | 1 cut(s) | 147 |
| Bpu14I | TTCGAA | 1 cut(s) | 400 |
| Bse1I | ACTGG | 2 cut(s) | 152, 180 |
| BseBI | CCWGG | 1 cut(s) | 98 |
| BseGI | GGATG | 1 cut(s) | 321 |
| BseNI | ACTGG | 2 cut(s) | 152, 180 |
| BshFI | GGCC | 1 cut(s) | 386 |
| BsmI | GAATGC | 1 cut(s) | 165 |
| BsnI | GGCC | 1 cut(s) | 386 |
| Bsp119I | TTCGAA | 1 cut(s) | 400 |
| Bsp1407I | TGTACA | 1 cut(s) | 504 |
| BspANI | GGCC | 1 cut(s) | 386 |
| BspLI | GGNNCC | 2 cut(s) | 102, 177 |
| BspT104I | TTCGAA | 1 cut(s) | 400 |
| BsrGI | TGTACA | 1 cut(s) | 504 |
| BsrI | ACTGG | 2 cut(s) | 152, 180 |
| Bst2UI | CCWGG | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 3 cut(s) | 40, 353, 511 |
| Bst6I | CTCTTC | 1 cut(s) | 242 |
| BstAUI | TGTACA | 1 cut(s) | 504 |
| BstBI | TTCGAA | 1 cut(s) | 400 |
| BstF5I | GGATG | 1 cut(s) | 321 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 78 |
| BstNI | CCWGG | 1 cut(s) | 98 |
| BstSCI | CCNGG | 1 cut(s) | 96 |
| BstV2I | GAAGAC | 1 cut(s) | 147 |
| BsuRI | GGCC | 1 cut(s) | 386 |
| BtsCI | GGATG | 1 cut(s) | 321 |
| BtsIMutI | CAGTG | 2 cut(s) | 213, 507 |
| Csp6I | GTAC | 3 cut(s) | 274, 337, 505 |
| CviAII | CATG | 1 cut(s) | 301 |
| CviJI | RGCY | 4 cut(s) | 56, 103, 186, 386 |
| CviKI_1 | RGCY | 4 cut(s) | 56, 103, 186, 386 |
| CviQI | GTAC | 3 cut(s) | 274, 337, 505 |
| DraIII | CACNNNGTG | 1 cut(s) | 470 |
| Eam1104I | CTCTTC | 1 cut(s) | 242 |
| EarI | CTCTTC | 1 cut(s) | 242 |
| EcoRI | GAATTC | 1 cut(s) | 202 |
| EcoRII | CCWGG | 1 cut(s) | 96 |
| FaeI | CATG | 1 cut(s) | 304 |
| FaiI | YATR | 8 cut(s) | 59, 110, 126, 223, 302, 375, 420, 422 |
| FatI | CATG | 1 cut(s) | 300 |
| FauNDI | CATATG | 1 cut(s) | 420 |
| FokI | GGATG | 1 cut(s) | 308 |
| HaeIII | GGCC | 1 cut(s) | 386 |
| Hin1II | CATG | 1 cut(s) | 304 |
| HincII | GTYRAC | 1 cut(s) | 411 |
| HindII | GTYRAC | 1 cut(s) | 411 |
| HinfI | GANTC | 2 cut(s) | 304, 407 |
| HphI | GGTGA | 1 cut(s) | 188 |
| Hpy166II | GTNNAC | 4 cut(s) | 339, 349, 411, 507 |
| Hpy188III | TCNNGA | 3 cut(s) | 25, 87, 368 |
| Hpy8I | GTNNAC | 4 cut(s) | 339, 349, 411, 507 |
| HpyAV | CCTTC | 2 cut(s) | 307, 425 |
| HpyCH4III | ACNGT | 3 cut(s) | 40, 353, 511 |
| HpyCH4IV | ACGT | 1 cut(s) | 225 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 78 |
| HpySE526I | ACGT | 1 cut(s) | 225 |
| Hsp92II | CATG | 1 cut(s) | 304 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 8 cut(s) | 72, 83, 110, 158, 165, 193, 212, 257 |
| LweI | GCATC | 1 cut(s) | 330 |
| MaeII | ACGT | 1 cut(s) | 225 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MboII | GAAGA | 3 cut(s) | 149, 152, 259 |
| MluCI | AATT | 5 cut(s) | 29, 47, 82, 202, 485 |
| MlyI | GAGTC | 1 cut(s) | 416 |
| MnlI | CCTC | 3 cut(s) | 114, 310, 397 |
| MseI | TTAA | 5 cut(s) | 50, 120, 393, 429, 495 |
| MspR9I | CCNGG | 1 cut(s) | 98 |
| Mva1269I | GAATGC | 1 cut(s) | 165 |
| MvaI | CCWGG | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 78 |
| NdeI | CATATG | 1 cut(s) | 420 |
| NlaIII | CATG | 1 cut(s) | 304 |
| NlaIV | GGNNCC | 2 cut(s) | 102, 177 |
| NmuCI | GTSAC | 1 cut(s) | 34 |
| NspV | TTCGAA | 1 cut(s) | 400 |
| PctI | GAATGC | 1 cut(s) | 165 |
| PfeI | GAWTC | 1 cut(s) | 304 |
| PfoI | TCCNGGA | 1 cut(s) | 96 |
| PleI | GAGTC | 1 cut(s) | 415 |
| PpsI | GAGTC | 1 cut(s) | 415 |
| Psp6I | CCWGG | 1 cut(s) | 96 |
| PspGI | CCWGG | 1 cut(s) | 96 |
| PspN4I | GGNNCC | 2 cut(s) | 102, 177 |
| RsaI | GTAC | 3 cut(s) | 275, 338, 506 |
| RsaNI | GTAC | 3 cut(s) | 274, 337, 505 |
| SaqAI | TTAA | 5 cut(s) | 50, 120, 393, 429, 495 |
| SchI | GAGTC | 1 cut(s) | 416 |
| ScrFI | CCNGG | 1 cut(s) | 98 |
| SetI | ASST | 2 cut(s) | 228, 501 |
| SfaNI | GCATC | 1 cut(s) | 330 |
| SfuI | TTCGAA | 1 cut(s) | 400 |
| Sse9I | AATT | 5 cut(s) | 29, 47, 82, 202, 485 |
| StyD4I | CCNGG | 1 cut(s) | 96 |
| TaaI | ACNGT | 3 cut(s) | 40, 353, 511 |
| TaiI | ACGT | 1 cut(s) | 228 |
| TaqI | TCGA | 1 cut(s) | 400 |
| TasI | AATT | 5 cut(s) | 29, 47, 82, 202, 485 |
| TatI | WGTACW | 3 cut(s) | 273, 336, 504 |
| TfiI | GAWTC | 1 cut(s) | 304 |
| Tru1I | TTAA | 5 cut(s) | 50, 120, 393, 429, 495 |
| Tru9I | TTAA | 5 cut(s) | 50, 120, 393, 429, 495 |
| TscAI | CASTG | 2 cut(s) | 213, 514 |
| TseFI | GTSAC | 1 cut(s) | 34 |
| Tsp45I | GTSAC | 1 cut(s) | 34 |
| TspDTI | ATGAA | 3 cut(s) | 230, 296, 407 |
| TspGWI | ACGGA | 1 cut(s) | 503 |
| TspRI | CASTG | 2 cut(s) | 213, 514 |
| XapI | RAATTY | 3 cut(s) | 29, 202, 485 |