protein desumoylation
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008746 |
| rosa_multiflora | Rmu_sc0000317.1_g000007 Rmu_sc0000894.1_g000063 Rmu_sc0002051.1_g000006 Rmu_sc0032513.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00350860 |
| rosa_samantha | Rh2AG311500 Rh2AG311600 Rh2AG311700 Rh2BG319800 Rh2BG319900 Rh2BG394500 Rh2CG298700 Rh2DG336000 Rh3BG265100 Rh4BG133100 Rh4BG133200 Rh4BG146300 Rh4BG146400 Rh4CG143900 Rh4CG144000 Rh6DG199500 |
| rosa_wichuraiana | Rw0G013210 Rw2G031710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1796 |
| AarI | CACCTGC | 1 cut(s) | 1123 |
| Acc36I | ACCTGC | 2 cut(s) | 1123, 1375 |
| Acc65I | GGTACC | 2 cut(s) | 877, 1896 |
| AccB1I | GGYRCC | 2 cut(s) | 877, 1896 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 265 |
| AccBSI | CCGCTC | 1 cut(s) | 2512 |
| AccI | GTMKAC | 2 cut(s) | 1144, 2367 |
| AccII | CGCG | 2 cut(s) | 2135, 2528 |
| AccIII | TCCGGA | 1 cut(s) | 2262 |
| AciI | CCGC | 7 cut(s) | 41, 957, 1342, 1349, 1403, 2135, 2512 |
| AclI | AACGTT | 1 cut(s) | 1791 |
| AclWI | GGATC | 7 cut(s) | 275, 288, 846, 1414, 1988, 2201, 2214 |
| AcsI | RAATTY | 3 cut(s) | 14, 619, 1540 |
| AfaI | GTAC | 8 cut(s) | 162, 758, 879, 1276, 1482, 1697, 1814, 1898 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 265, 630, 631, 945, 1074, 1575, 1906, 2362 |
| AflIII | ACRYGT | 1 cut(s) | 1800 |
| AjnI | CCWGG | 1 cut(s) | 2222 |
| AleI | CACNNNNGTG | 2 cut(s) | 550, 846 |
| AluBI | AGCT | 9 cut(s) | 63, 500, 692, 994, 1015, 1052, 1757, 2067, 2324 |
| AluI | AGCT | 9 cut(s) | 63, 500, 692, 994, 1015, 1052, 1757, 2067, 2324 |
| Alw21I | GWGCWC | 4 cut(s) | 135, 1101, 1364, 2179 |
| Alw26I | GTCTC | 1 cut(s) | 558 |
| Alw44I | GTGCAC | 3 cut(s) | 1097, 1360, 2175 |
| AlwI | GGATC | 7 cut(s) | 275, 288, 846, 1414, 1988, 2201, 2214 |
| Ama87I | CYCGRG | 1 cut(s) | 2489 |
| Aor13HI | TCCGGA | 1 cut(s) | 2262 |
| AoxI | GGCC | 5 cut(s) | 1424, 1469, 1601, 1670, 1831 |
| ApaLI | GTGCAC | 3 cut(s) | 1097, 1360, 2175 |
| ApeKI | GCWGC | 9 cut(s) | 692, 695, 1345, 1381, 1535, 1785, 2159, 2504, 2515 |
| ApoI | RAATTY | 3 cut(s) | 14, 619, 1540 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 191, 223, 494, 526 |
| AseI | ATTAAT | 1 cut(s) | 1979 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1508 |
| Asp718I | GGTACC | 2 cut(s) | 877, 1896 |
| AspLEI | GCGC | 1 cut(s) | 1871 |
| AspS9I | GGNCC | 6 cut(s) | 911, 979, 1297, 1424, 1601, 2478 |
| AsuC2I | CCSGG | 1 cut(s) | 1619 |
| AsuHPI | GGTGA | 3 cut(s) | 23, 1150, 1512 |
| AvaI | CYCGRG | 1 cut(s) | 2489 |
| AvaII | GGWCC | 4 cut(s) | 911, 979, 1297, 2478 |
| AxyI | CCTNAGG | 1 cut(s) | 2037 |
| BaeGI | GKGCMC | 3 cut(s) | 1101, 1364, 2179 |
| BamHI | GGATCC | 2 cut(s) | 280, 2206 |
| BanI | GGYRCC | 2 cut(s) | 877, 1896 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 861, 893 |
| BbsI | GAAGAC | 2 cut(s) | 128, 2319 |
| Bbv12I | GWGCWC | 4 cut(s) | 135, 1101, 1364, 2179 |
| BbvI | GCAGC | 9 cut(s) | 679, 682, 1357, 1393, 1522, 1797, 2171, 2491, 2527 |
| BceAI | ACGGC | 2 cut(s) | 1052, 1588 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1420, 1454 |
| BciT130I | CCWGG | 1 cut(s) | 2224 |
| BciVI | GTATCC | 1 cut(s) | 1615 |
| BclI | TGATCA | 1 cut(s) | 805 |
| BcnI | CCSGG | 1 cut(s) | 1619 |
| BcoDI | GTCTC | 1 cut(s) | 558 |
| BfaI | CTAG | 3 cut(s) | 1083, 1736, 1778 |
| BfuAI | ACCTGC | 2 cut(s) | 1123, 1375 |
| BfuI | GTATCC | 1 cut(s) | 1615 |
| BglII | AGATCT | 1 cut(s) | 406 |
| BlpI | GCTNAGC | 1 cut(s) | 2508 |
| BmcAI | AGTACT | 1 cut(s) | 1482 |
| Bme1390I | CCNGG | 2 cut(s) | 1619, 2224 |
| Bme18I | GGWCC | 4 cut(s) | 911, 979, 1297, 2478 |
| BmeT110I | CYCGRG | 1 cut(s) | 2489 |
| BmgT120I | GGNCC | 6 cut(s) | 911, 979, 1297, 1424, 1601, 2478 |
| BmiI | GGNNCC | 7 cut(s) | 282, 879, 1898, 2088, 2208, 2462, 2480 |
| BmrFI | CCNGG | 2 cut(s) | 1619, 2224 |
| BmrI | ACTGGG | 2 cut(s) | 1902, 2299 |
| BmsI | GCATC | 1 cut(s) | 439 |
| BmuI | ACTGGG | 2 cut(s) | 1902, 2299 |
| BpiI | GAAGAC | 2 cut(s) | 128, 2319 |
| BpmI | CTGGAG | 1 cut(s) | 1037 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2508 |
| BpuEI | CTTGAG | 1 cut(s) | 2429 |
| BpuMI | CCSGG | 1 cut(s) | 1619 |
| Bsa29I | ATCGAT | 1 cut(s) | 603 |
| BsaAI | YACGTR | 2 cut(s) | 609, 1812 |
| BsaBI | GATNNNNATC | 1 cut(s) | 405 |
| BsaJI | CCNNGG | 7 cut(s) | 537, 885, 1549, 1667, 1900, 2090, 2222 |
| BsaWI | WCCGGW | 2 cut(s) | 556, 2262 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 265, 630, 631, 945, 1074, 1575, 1906, 2362 |
| Bse1I | ACTGG | 3 cut(s) | 1897, 2184, 2294 |
| Bse21I | CCTNAGG | 1 cut(s) | 2037 |
| Bse3DI | GCAATG | 3 cut(s) | 174, 239, 1985 |
| Bse8I | GATNNNNATC | 1 cut(s) | 405 |
| BseAI | TCCGGA | 1 cut(s) | 2262 |
| BseBI | CCWGG | 1 cut(s) | 2224 |
| BseCI | ATCGAT | 1 cut(s) | 603 |
| BseDI | CCNNGG | 7 cut(s) | 537, 885, 1549, 1667, 1900, 2090, 2222 |
| BseJI | GATNNNNATC | 1 cut(s) | 405 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 265, 630, 631, 945, 1074, 1575, 1906, 2362 |
| BseMI | GCAATG | 3 cut(s) | 174, 239, 1985 |
| BseMII | CTCAG | 3 cut(s) | 148, 2043, 2499 |
| BseNI | ACTGG | 3 cut(s) | 1897, 2184, 2294 |
| BseRI | GAGGAG | 3 cut(s) | 459, 910, 1925 |
| BseSI | GKGCMC | 3 cut(s) | 1101, 1364, 2179 |
| BseXI | GCAGC | 9 cut(s) | 679, 682, 1357, 1393, 1522, 1797, 2171, 2491, 2527 |
| BseYI | CCCAGC | 1 cut(s) | 2000 |
| Bsh1236I | CGCG | 2 cut(s) | 2135, 2528 |
| BshFI | GGCC | 5 cut(s) | 1426, 1471, 1603, 1672, 1833 |
| BshNI | GGYRCC | 2 cut(s) | 877, 1896 |
| BshVI | ATCGAT | 1 cut(s) | 603 |
| BsiHKAI | GWGCWC | 4 cut(s) | 135, 1101, 1364, 2179 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2489 |
| BsiSI | CCGG | 4 cut(s) | 557, 1618, 1997, 2263 |
| BslFI | GGGAC | 3 cut(s) | 1345, 2205, 2464 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 265, 630, 631, 945, 1074, 1575, 1906, 2362 |
| BsmAI | GTCTC | 1 cut(s) | 558 |
| BsmBI | CGTCTC | 1 cut(s) | 558 |
| BsmFI | GGGAC | 3 cut(s) | 1345, 2205, 2464 |
| BsmI | GAATGC | 3 cut(s) | 781, 1970, 2399 |
| BsnI | GGCC | 5 cut(s) | 1426, 1471, 1603, 1672, 1833 |
| BsoBI | CYCGRG | 1 cut(s) | 2489 |
| Bsp1286I | GDGCHC | 4 cut(s) | 135, 1101, 1364, 2179 |
| Bsp13I | TCCGGA | 1 cut(s) | 2262 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2508 |
| Bsp19I | CCATGG | 2 cut(s) | 537, 1549 |
| BspACI | CCGC | 7 cut(s) | 41, 957, 1342, 1349, 1403, 2135, 2512 |
| BspANI | GGCC | 5 cut(s) | 1426, 1471, 1603, 1672, 1833 |
| BspCNI | CTCAG | 3 cut(s) | 147, 2044, 2500 |
| BspDI | ATCGAT | 1 cut(s) | 603 |
| BspEI | TCCGGA | 1 cut(s) | 2262 |
| BspFNI | CGCG | 2 cut(s) | 2135, 2528 |
| BspLI | GGNNCC | 7 cut(s) | 282, 879, 1898, 2088, 2208, 2462, 2480 |
| BspMI | ACCTGC | 2 cut(s) | 1123, 1375 |
| BspPI | GGATC | 7 cut(s) | 275, 288, 846, 1414, 1988, 2201, 2214 |
| BspT107I | GGYRCC | 2 cut(s) | 877, 1896 |
| BsrBI | CCGCTC | 1 cut(s) | 2512 |
| BsrDI | GCAATG | 3 cut(s) | 174, 239, 1985 |
| BsrI | ACTGG | 3 cut(s) | 1897, 2184, 2294 |
| BssECI | CCNNGG | 7 cut(s) | 537, 885, 1549, 1667, 1900, 2090, 2222 |
| BssT1I | CCWWGG | 5 cut(s) | 537, 885, 1549, 1900, 2090 |
| Bst2UI | CCWGG | 1 cut(s) | 2224 |
| Bst6I | CTCTTC | 2 cut(s) | 389, 1484 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1712 |
| BstBAI | YACGTR | 2 cut(s) | 609, 1812 |
| BstC8I | GCNNGC | 2 cut(s) | 2175, 2399 |
| BstDEI | CTNAG | 6 cut(s) | 70, 134, 1515, 2037, 2052, 2508 |
| BstDSI | CCRYGG | 2 cut(s) | 537, 1549 |
| BstEII | GGTNACC | 1 cut(s) | 1564 |
| BstFNI | CGCG | 2 cut(s) | 2135, 2528 |
| BstHHI | GCGC | 1 cut(s) | 1871 |
| BstMAI | GTCTC | 1 cut(s) | 558 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 641, 1348, 1688, 1712, 1763, 2048, 2114 |
| BstNI | CCWGG | 1 cut(s) | 2224 |
| BstNSI | RCATGY | 2 cut(s) | 323, 1804 |
| BstPI | GGTNACC | 1 cut(s) | 1564 |
| BstSCI | CCNGG | 2 cut(s) | 1617, 2222 |
| BstSLI | GKGCMC | 3 cut(s) | 1101, 1364, 2179 |
| BstSNI | TACGTA | 1 cut(s) | 1812 |
| BstUI | CGCG | 2 cut(s) | 2135, 2528 |
| BstV1I | GCAGC | 9 cut(s) | 679, 682, 1357, 1393, 1522, 1797, 2171, 2491, 2527 |
| BstV2I | GAAGAC | 2 cut(s) | 128, 2319 |
| BstX2I | RGATCY | 3 cut(s) | 280, 406, 2206 |
| BstYI | RGATCY | 3 cut(s) | 280, 406, 2206 |
| Bsu15I | ATCGAT | 1 cut(s) | 603 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2037 |
| BsuI | GTATCC | 1 cut(s) | 1615 |
| BsuRI | GGCC | 5 cut(s) | 1426, 1471, 1603, 1672, 1833 |
| BsuTUI | ATCGAT | 1 cut(s) | 603 |
| BtgI | CCRYGG | 2 cut(s) | 537, 1549 |
| BtgZI | GCGATG | 1 cut(s) | 980 |
| BtsI | GCAGTG | 1 cut(s) | 1443 |
| BtsIMutI | CAGTG | 5 cut(s) | 394, 545, 750, 1443, 2177 |
| BveI | ACCTGC | 2 cut(s) | 1123, 1375 |
| Cac8I | GCNNGC | 2 cut(s) | 2175, 2399 |
| CfoI | GCGC | 1 cut(s) | 1871 |
| Cfr13I | GGNCC | 6 cut(s) | 911, 979, 1297, 1424, 1601, 2478 |
| ClaI | ATCGAT | 1 cut(s) | 603 |
| CseI | GACGC | 1 cut(s) | 2141 |
| Csp6I | GTAC | 8 cut(s) | 161, 757, 878, 1275, 1481, 1696, 1813, 1897 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 349, 384, 854, 889 |
| CviQI | GTAC | 8 cut(s) | 161, 757, 878, 1275, 1481, 1696, 1813, 1897 |
| DdeI | CTNAG | 6 cut(s) | 70, 134, 1515, 2037, 2052, 2508 |
| DraI | TTTAAA | 1 cut(s) | 817 |
| Eam1104I | CTCTTC | 2 cut(s) | 389, 1484 |
| EarI | CTCTTC | 2 cut(s) | 389, 1484 |
| Eco105I | TACGTA | 1 cut(s) | 1812 |
| Eco130I | CCWWGG | 5 cut(s) | 537, 885, 1549, 1900, 2090 |
| Eco47I | GGWCC | 4 cut(s) | 911, 979, 1297, 2478 |
| Eco81I | CCTNAGG | 1 cut(s) | 2037 |
| Eco88I | CYCGRG | 1 cut(s) | 2489 |
| Eco91I | GGTNACC | 1 cut(s) | 1564 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1297, 1424, 2478 |
| EcoO65I | GGTNACC | 1 cut(s) | 1564 |
| EcoRII | CCWGG | 1 cut(s) | 2222 |
| EcoT14I | CCWWGG | 5 cut(s) | 537, 885, 1549, 1900, 2090 |
| ErhI | CCWWGG | 5 cut(s) | 537, 885, 1549, 1900, 2090 |
| Esp3I | CGTCTC | 1 cut(s) | 558 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1746, 1778 |
| FaqI | GGGAC | 3 cut(s) | 1345, 2205, 2464 |
| FauI | CCCGC | 3 cut(s) | 34, 950, 1396 |
| FauNDI | CATATG | 1 cut(s) | 2448 |
| FbaI | TGATCA | 1 cut(s) | 805 |
| FblI | GTMKAC | 2 cut(s) | 1144, 2367 |
| FspBI | CTAG | 3 cut(s) | 1083, 1736, 1778 |
| GlaI | GCGC | 1 cut(s) | 1870 |
| GsaI | CCCAGC | 1 cut(s) | 2004 |
| GsuI | CTGGAG | 1 cut(s) | 1037 |
| HaeIII | GGCC | 5 cut(s) | 1426, 1471, 1603, 1672, 1833 |
| HapII | CCGG | 4 cut(s) | 557, 1618, 1997, 2263 |
| HgaI | GACGC | 1 cut(s) | 2141 |
| HhaI | GCGC | 1 cut(s) | 1871 |
| Hin6I | GCGC | 1 cut(s) | 1869 |
| HinP1I | GCGC | 1 cut(s) | 1869 |
| HincII | GTYRAC | 4 cut(s) | 301, 1145, 1890, 2062 |
| HindII | GTYRAC | 4 cut(s) | 301, 1145, 1890, 2062 |
| HindIII | AAGCTT | 1 cut(s) | 1755 |
| HinfI | GANTC | 7 cut(s) | 47, 357, 578, 740, 1141, 1935, 2167 |
| HpaI | GTTAAC | 1 cut(s) | 301 |
| HpaII | CCGG | 4 cut(s) | 557, 1618, 1997, 2263 |
| HphI | GGTGA | 3 cut(s) | 23, 1150, 1512 |
| Hpy188I | TCNGA | 7 cut(s) | 237, 348, 1393, 1431, 1467, 1630, 2311 |
| Hpy188III | TCNNGA | 6 cut(s) | 514, 705, 2084, 2263, 2285, 2408 |
| HpyCH4IV | ACGT | 6 cut(s) | 430, 608, 1219, 1321, 1791, 1811 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 641, 1348, 1688, 1712, 1763, 2048, 2114 |
| HpyF3I | CTNAG | 6 cut(s) | 70, 134, 1515, 2037, 2052, 2508 |
| HpySE526I | ACGT | 6 cut(s) | 430, 608, 1219, 1321, 1791, 1811 |
| HspAI | GCGC | 1 cut(s) | 1869 |
| Kpn2I | TCCGGA | 1 cut(s) | 2262 |
| KpnI | GGTACC | 2 cut(s) | 881, 1900 |
| Ksp22I | TGATCA | 1 cut(s) | 805 |
| KspAI | GTTAAC | 1 cut(s) | 301 |
| LmnI | GCTCC | 2 cut(s) | 1912, 1954 |
| Lsp1109I | GCAGC | 9 cut(s) | 679, 682, 1357, 1393, 1522, 1797, 2171, 2491, 2527 |
| LweI | GCATC | 1 cut(s) | 439 |
| MaeI | CTAG | 3 cut(s) | 1083, 1736, 1778 |
| MaeII | ACGT | 6 cut(s) | 430, 608, 1219, 1321, 1791, 1811 |
| MaeIII | GTNAC | 4 cut(s) | 1283, 1518, 1564, 2285 |
| MbiI | CCGCTC | 1 cut(s) | 2512 |
| MboII | GAAGA | 9 cut(s) | 133, 406, 416, 849, 1501, 1591, 1696, 1837, 2324 |
| MflI | RGATCY | 3 cut(s) | 280, 406, 2206 |
| MhlI | GDGCHC | 4 cut(s) | 135, 1101, 1364, 2179 |
| MlyI | GAGTC | 3 cut(s) | 587, 1150, 1929 |
| MmeI | TCCRAC | 5 cut(s) | 258, 260, 1152, 1987, 2289 |
| MroI | TCCGGA | 1 cut(s) | 2262 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1508 |
| MslI | CAYNNNNRTG | 2 cut(s) | 550, 846 |
| MspA1I | CMGCKG | 2 cut(s) | 994, 1403 |
| MspI | CCGG | 4 cut(s) | 557, 1618, 1997, 2263 |
| MspR9I | CCNGG | 2 cut(s) | 1619, 2224 |
| Mva1269I | GAATGC | 3 cut(s) | 781, 1970, 2399 |
| MvaI | CCWGG | 1 cut(s) | 2224 |
| MvnI | CGCG | 2 cut(s) | 2135, 2528 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 641, 1348, 1688, 1712, 1763, 2048, 2114 |
| NciI | CCSGG | 1 cut(s) | 1619 |
| NcoI | CCATGG | 2 cut(s) | 537, 1549 |
| NdeI | CATATG | 1 cut(s) | 2448 |
| NlaIV | GGNNCC | 7 cut(s) | 282, 879, 1898, 2088, 2208, 2462, 2480 |
| NmeAIII | GCCGAG | 1 cut(s) | 1692 |
| NmuCI | GTSAC | 2 cut(s) | 1518, 2285 |
| NspI | RCATGY | 2 cut(s) | 323, 1804 |
| OliI | CACNNNNGTG | 2 cut(s) | 550, 846 |
| PaqCI | CACCTGC | 1 cut(s) | 1123 |
| PciI | ACATGT | 1 cut(s) | 1800 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1098 |
| PctI | GAATGC | 3 cut(s) | 781, 1970, 2399 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1508 |
| PfeI | GAWTC | 4 cut(s) | 47, 357, 740, 2167 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 265 |
| PleI | GAGTC | 3 cut(s) | 586, 1149, 1929 |
| PpsI | GAGTC | 3 cut(s) | 586, 1149, 1929 |
| Ppu21I | YACGTR | 2 cut(s) | 609, 1812 |
| PpuMI | RGGWCCY | 2 cut(s) | 1297, 2478 |
| PscI | ACATGT | 1 cut(s) | 1800 |
| PshBI | ATTAAT | 1 cut(s) | 1979 |
| PsiI | TTATAA | 1 cut(s) | 1796 |
| Psp1406I | AACGTT | 1 cut(s) | 1791 |
| Psp5II | RGGWCCY | 2 cut(s) | 1297, 2478 |
| Psp6I | CCWGG | 1 cut(s) | 2222 |
| PspEI | GGTNACC | 1 cut(s) | 1564 |
| PspFI | CCCAGC | 1 cut(s) | 2000 |
| PspGI | CCWGG | 1 cut(s) | 2222 |
| PspN4I | GGNNCC | 7 cut(s) | 282, 879, 1898, 2088, 2208, 2462, 2480 |
| PspPI | GGNCC | 6 cut(s) | 911, 979, 1297, 1424, 1601, 2478 |
| PspPPI | RGGWCCY | 2 cut(s) | 1297, 2478 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 740, 772 |
| PsuI | RGATCY | 3 cut(s) | 280, 406, 2206 |
| PvuII | CAGCTG | 1 cut(s) | 994 |
| RsaI | GTAC | 8 cut(s) | 162, 758, 879, 1276, 1482, 1697, 1814, 1898 |
| RsaNI | GTAC | 8 cut(s) | 161, 757, 878, 1275, 1481, 1696, 1813, 1897 |
| RseI | CAYNNNNRTG | 2 cut(s) | 550, 846 |
| SalI | GTCGAC | 1 cut(s) | 1143 |
| Sau96I | GGNCC | 6 cut(s) | 911, 979, 1297, 1424, 1601, 2478 |
| ScaI | AGTACT | 1 cut(s) | 1482 |
| SchI | GAGTC | 3 cut(s) | 587, 1150, 1929 |
| ScrFI | CCNGG | 2 cut(s) | 1619, 2224 |
| SduI | GDGCHC | 4 cut(s) | 135, 1101, 1364, 2179 |
| SfaNI | GCATC | 1 cut(s) | 439 |
| SinI | GGWCC | 4 cut(s) | 911, 979, 1297, 2478 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 550, 846 |
| SmlI | CTYRAG | 1 cut(s) | 2408 |
| SmoI | CTYRAG | 1 cut(s) | 2408 |
| SnaBI | TACGTA | 1 cut(s) | 1812 |
| SsiI | CCGC | 7 cut(s) | 41, 957, 1342, 1349, 1403, 2135, 2512 |
| SspI | AATATT | 1 cut(s) | 2468 |
| SspMI | CTAG | 3 cut(s) | 1083, 1736, 1778 |
| StyD4I | CCNGG | 2 cut(s) | 1617, 2222 |
| StyI | CCWWGG | 5 cut(s) | 537, 885, 1549, 1900, 2090 |
| TaiI | ACGT | 6 cut(s) | 433, 611, 1222, 1324, 1794, 1814 |
| TaqI | TCGA | 5 cut(s) | 603, 1144, 1205, 1487, 1881 |
| TaqII | GACCGA | 1 cut(s) | 953 |
| TatI | WGTACW | 1 cut(s) | 1480 |
| TauI | GCSGC | 3 cut(s) | 1345, 1351, 2515 |
| TfiI | GAWTC | 4 cut(s) | 47, 357, 740, 2167 |
| TscAI | CASTG | 5 cut(s) | 394, 552, 750, 1443, 2184 |
| TseFI | GTSAC | 2 cut(s) | 1518, 2285 |
| TseI | GCWGC | 9 cut(s) | 692, 695, 1345, 1381, 1535, 1785, 2159, 2504, 2515 |
| Tsp45I | GTSAC | 2 cut(s) | 1518, 2285 |
| TspDTI | ATGAA | 6 cut(s) | 99, 306, 417, 514, 1073, 1597 |
| TspGWI | ACGGA | 3 cut(s) | 82, 774, 858 |
| TspRI | CASTG | 5 cut(s) | 394, 552, 750, 1443, 2184 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 265 |
| VneI | GTGCAC | 3 cut(s) | 1097, 1360, 2175 |
| VpaK11BI | GGWCC | 4 cut(s) | 911, 979, 1297, 2478 |
| VspI | ATTAAT | 1 cut(s) | 1979 |
| XapI | RAATTY | 3 cut(s) | 14, 619, 1540 |
| XceI | RCATGY | 2 cut(s) | 323, 1804 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 792 |
| XmiI | GTMKAC | 2 cut(s) | 1144, 2367 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1508 |
| XspI | CTAG | 3 cut(s) | 1083, 1736, 1778 |
| ZrmI | AGTACT | 1 cut(s) | 1482 |