Rh4BG146400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
26197865 .. 26202089
4225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG146400.1

Sequence Viewer

Length: 237 bp
ATGGCTGATGAAAGGGAGTGGATCGATCATTGGGAAAGAGATGGGGAGGCTATAGCAGTTAAGGAGAACGAAGCTGTTGTTGGTATACATCCAGAGCCAGCAGACATGAAGATTGCAGTTTGCAAGTTGGCTAGGTTGATTGATGTGTATGATGAGGATAGAATTGTCGAGATTGTATTGCATGTGTGGAGGCGACTAAAGGACAAAGATAGAAACAAGGTTGATGAGAAACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

78

Amino Acids

9.26

Weight (kDa)

5.13

Isoelectric Point (pI)

19.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 85
AclWI GGATC 1 cut(s) 29
AjuI GAANNNNNNNTTGG 2 cut(s) 63, 95
AluBI AGCT 1 cut(s) 74
AluI AGCT 1 cut(s) 74
AlwI GGATC 1 cut(s) 29
BccI CCATC 1 cut(s) 35
BfaI CTAG 1 cut(s) 132
BfmI CTRYAG 1 cut(s) 51
Bsa29I ATCGAT 1 cut(s) 24
BseCI ATCGAT 1 cut(s) 24
BseGI GGATG 1 cut(s) 88
BshVI ATCGAT 1 cut(s) 24
Bsp143I GATC 2 cut(s) 21, 25
BspDI ATCGAT 1 cut(s) 24
BspPI GGATC 1 cut(s) 29
BssMI GATC 2 cut(s) 21, 25
BssNAI GTATAC 1 cut(s) 86
Bst1107I GTATAC 1 cut(s) 86
BstC8I GCNNGC 1 cut(s) 99
BstF5I GGATG 1 cut(s) 88
BstKTI GATC 2 cut(s) 24, 28
BstMBI GATC 2 cut(s) 21, 25
BstNSI RCATGY 1 cut(s) 185
BstSFI CTRYAG 1 cut(s) 51
BstZ17I GTATAC 1 cut(s) 86
Bsu15I ATCGAT 1 cut(s) 24
BsuTUI ATCGAT 1 cut(s) 24
BtsCI GGATG 1 cut(s) 88
Cac8I GCNNGC 1 cut(s) 99
ClaI ATCGAT 1 cut(s) 24
CviAII CATG 2 cut(s) 106, 182
CviJI RGCY 5 cut(s) 5, 50, 74, 97, 131
CviKI_1 RGCY 5 cut(s) 5, 50, 74, 97, 131
DpnI GATC 2 cut(s) 23, 27
DpnII GATC 2 cut(s) 21, 25
FaeI CATG 2 cut(s) 109, 185
FaiI YATR 5 cut(s) 53, 86, 107, 150, 183
FatI CATG 2 cut(s) 105, 181
FblI GTMKAC 1 cut(s) 85
FokI GGATG 1 cut(s) 75
FspBI CTAG 1 cut(s) 132
Hin1II CATG 2 cut(s) 109, 185
Hpy166II GTNNAC 1 cut(s) 86
Hpy188III TCNNGA 2 cut(s) 92, 169
Hpy8I GTNNAC 1 cut(s) 86
HpyCH4V TGCA 3 cut(s) 116, 123, 181
Hsp92II CATG 2 cut(s) 109, 185
Kzo9I GATC 2 cut(s) 21, 25
LpnPI CCDG 2 cut(s) 105, 111
MaeI CTAG 1 cut(s) 132
MalI GATC 2 cut(s) 23, 27
MboI GATC 2 cut(s) 21, 25
MboII GAAGA 1 cut(s) 121
MluCI AATT 1 cut(s) 162
MnlI CCTC 3 cut(s) 40, 148, 183
MseI TTAA 2 cut(s) 60, 235
NdeII GATC 2 cut(s) 21, 25
NlaIII CATG 2 cut(s) 109, 185
NspI RCATGY 1 cut(s) 185
SaqAI TTAA 2 cut(s) 60, 235
Sau3AI GATC 2 cut(s) 21, 25
SetI ASST 3 cut(s) 76, 137, 222
SfcI CTRYAG 1 cut(s) 51
SgeI CNNG 8 cut(s) 104, 110, 118, 136, 144, 181, 194, 229
Sse9I AATT 1 cut(s) 162
SspMI CTAG 1 cut(s) 132
TaqI TCGA 2 cut(s) 24, 168
TasI AATT 1 cut(s) 162
Tru1I TTAA 2 cut(s) 60, 235
Tru9I TTAA 2 cut(s) 60, 235
TspDTI ATGAA 2 cut(s) 24, 122
XceI RCATGY 1 cut(s) 185
XmiI GTMKAC 1 cut(s) 85
XspI CTAG 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.