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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008746 |
| rosa_multiflora | Rmu_sc0000317.1_g000007 Rmu_sc0000894.1_g000063 Rmu_sc0002051.1_g000006 Rmu_sc0032513.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00350860 |
| rosa_samantha | Rh2AG311500 Rh2AG311600 Rh2AG311700 Rh2BG319800 Rh2BG319900 Rh2BG394500 Rh2CG298700 Rh2DG336000 Rh3BG265100 Rh4BG133100 Rh4BG133200 Rh4BG146300 Rh4BG146400 Rh4CG143900 Rh4CG144000 Rh6DG199500 |
| rosa_wichuraiana | Rw0G013210 Rw2G031710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 68 |
| Acc65I | GGTACC | 1 cut(s) | 408 |
| AccB1I | GGYRCC | 1 cut(s) | 408 |
| AccI | GTMKAC | 1 cut(s) | 175 |
| AciI | CCGC | 1 cut(s) | 373 |
| AclWI | GGATC | 1 cut(s) | 166 |
| AfaI | GTAC | 1 cut(s) | 410 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 105, 547 |
| AgsI | TTSAA | 4 cut(s) | 149, 325, 394, 472 |
| AluBI | AGCT | 4 cut(s) | 28, 49, 83, 509 |
| AluI | AGCT | 4 cut(s) | 28, 49, 83, 509 |
| AlwI | GGATC | 1 cut(s) | 166 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 232, 455 |
| Asp718I | GGTACC | 1 cut(s) | 408 |
| AspLEI | GCGC | 1 cut(s) | 383 |
| AspS9I | GGNCC | 1 cut(s) | 328 |
| AsuHPI | GGTGA | 2 cut(s) | 32, 181 |
| AvaII | GGWCC | 1 cut(s) | 328 |
| BanI | GGYRCC | 1 cut(s) | 408 |
| BauI | CACGAG | 1 cut(s) | 296 |
| BbsI | GAAGAC | 1 cut(s) | 504 |
| BccI | CCATC | 3 cut(s) | 128, 353, 565 |
| BceAI | ACGGC | 1 cut(s) | 83 |
| BfaI | CTAG | 1 cut(s) | 465 |
| BfmI | CTRYAG | 1 cut(s) | 611 |
| Bme18I | GGWCC | 1 cut(s) | 328 |
| BmgT120I | GGNCC | 1 cut(s) | 328 |
| BmiI | GGNNCC | 1 cut(s) | 410 |
| BmrI | ACTGGG | 1 cut(s) | 414 |
| BmuI | ACTGGG | 1 cut(s) | 414 |
| BpiI | GAAGAC | 1 cut(s) | 504 |
| BpmI | CTGGAG | 1 cut(s) | 71 |
| BpuEI | CTTGAG | 1 cut(s) | 614 |
| BsaJI | CCNNGG | 1 cut(s) | 412 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 105, 547 |
| Bse1I | ACTGG | 1 cut(s) | 409 |
| BseDI | CCNNGG | 1 cut(s) | 412 |
| BseGI | GGATG | 4 cut(s) | 114, 239, 364, 422 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 105, 547 |
| BseNI | ACTGG | 1 cut(s) | 409 |
| BseRI | GAGGAG | 1 cut(s) | 651 |
| BshNI | GGYRCC | 1 cut(s) | 408 |
| BslFI | GGGAC | 1 cut(s) | 376 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 105, 547 |
| BsmFI | GGGAC | 1 cut(s) | 376 |
| BsmI | GAATGC | 2 cut(s) | 482, 584 |
| Bsp143I | GATC | 2 cut(s) | 158, 280 |
| BspACI | CCGC | 1 cut(s) | 373 |
| BspLI | GGNNCC | 1 cut(s) | 410 |
| BspPI | GGATC | 1 cut(s) | 166 |
| BspT107I | GGYRCC | 1 cut(s) | 408 |
| BsrI | ACTGG | 1 cut(s) | 409 |
| BssECI | CCNNGG | 1 cut(s) | 412 |
| BssMI | GATC | 2 cut(s) | 158, 280 |
| BssSI | CACGAG | 1 cut(s) | 296 |
| BssT1I | CCWWGG | 1 cut(s) | 412 |
| Bst2BI | CACGAG | 1 cut(s) | 296 |
| Bst4CI | ACNGT | 1 cut(s) | 615 |
| BstC8I | GCNNGC | 1 cut(s) | 584 |
| BstF5I | GGATG | 4 cut(s) | 114, 239, 364, 422 |
| BstHHI | GCGC | 1 cut(s) | 383 |
| BstKTI | GATC | 2 cut(s) | 161, 283 |
| BstMBI | GATC | 2 cut(s) | 158, 280 |
| BstSFI | CTRYAG | 1 cut(s) | 611 |
| BstV2I | GAAGAC | 1 cut(s) | 504 |
| BtsCI | GGATG | 4 cut(s) | 114, 239, 364, 422 |
| Cac8I | GCNNGC | 1 cut(s) | 584 |
| CfoI | GCGC | 1 cut(s) | 383 |
| Cfr13I | GGNCC | 1 cut(s) | 328 |
| Csp6I | GTAC | 1 cut(s) | 409 |
| CviAII | CATG | 2 cut(s) | 88, 284 |
| CviJI | RGCY | 5 cut(s) | 28, 49, 83, 98, 509 |
| CviKI_1 | RGCY | 5 cut(s) | 28, 49, 83, 98, 509 |
| CviQI | GTAC | 1 cut(s) | 409 |
| DpnI | GATC | 2 cut(s) | 160, 282 |
| DpnII | GATC | 2 cut(s) | 158, 280 |
| Eco130I | CCWWGG | 1 cut(s) | 412 |
| Eco47I | GGWCC | 1 cut(s) | 328 |
| EcoT14I | CCWWGG | 1 cut(s) | 412 |
| ErhI | CCWWGG | 1 cut(s) | 412 |
| FaeI | CATG | 2 cut(s) | 91, 287 |
| FaiI | YATR | 8 cut(s) | 68, 89, 285, 336, 442, 489, 521, 530 |
| FaqI | GGGAC | 1 cut(s) | 376 |
| FatI | CATG | 2 cut(s) | 87, 283 |
| FauI | CCCGC | 1 cut(s) | 366 |
| FblI | GTMKAC | 1 cut(s) | 175 |
| FokI | GGATG | 4 cut(s) | 121, 226, 371, 429 |
| FspBI | CTAG | 1 cut(s) | 465 |
| GlaI | GCGC | 1 cut(s) | 382 |
| GsuI | CTGGAG | 1 cut(s) | 71 |
| HhaI | GCGC | 1 cut(s) | 383 |
| Hin1II | CATG | 2 cut(s) | 91, 287 |
| Hin6I | GCGC | 1 cut(s) | 381 |
| HinP1I | GCGC | 1 cut(s) | 381 |
| HincII | GTYRAC | 3 cut(s) | 176, 402, 553 |
| HindII | GTYRAC | 3 cut(s) | 176, 402, 553 |
| HinfI | GANTC | 2 cut(s) | 172, 266 |
| HphI | GGTGA | 2 cut(s) | 32, 181 |
| Hpy166II | GTNNAC | 5 cut(s) | 23, 130, 176, 402, 553 |
| Hpy188I | TCNGA | 1 cut(s) | 496 |
| Hpy188III | TCNNGA | 1 cut(s) | 593 |
| Hpy8I | GTNNAC | 5 cut(s) | 23, 130, 176, 402, 553 |
| HpyAV | CCTTC | 9 cut(s) | 7, 11, 85, 282, 296, 319, 363, 466, 626 |
| HpyCH4III | ACNGT | 1 cut(s) | 615 |
| HpyCH4V | TGCA | 3 cut(s) | 444, 480, 586 |
| Hsp92II | CATG | 2 cut(s) | 91, 287 |
| HspAI | GCGC | 1 cut(s) | 381 |
| KpnI | GGTACC | 1 cut(s) | 412 |
| Kzo9I | GATC | 2 cut(s) | 158, 280 |
| LmnI | GCTCC | 1 cut(s) | 466 |
| LpnPI | CCDG | 4 cut(s) | 35, 87, 257, 390 |
| MaeI | CTAG | 1 cut(s) | 465 |
| MaeIII | GTNAC | 1 cut(s) | 314 |
| MalI | GATC | 2 cut(s) | 160, 282 |
| MboI | GATC | 2 cut(s) | 158, 280 |
| MboII | GAAGA | 1 cut(s) | 509 |
| MluCI | AATT | 6 cut(s) | 144, 275, 388, 556, 606, 652 |
| MlyI | GAGTC | 1 cut(s) | 181 |
| MnlI | CCTC | 8 cut(s) | 46, 99, 182, 202, 292, 541, 556, 629 |
| MroXI | GAANNNNTTC | 2 cut(s) | 232, 455 |
| MspA1I | CMGCKG | 1 cut(s) | 28 |
| Mva1269I | GAATGC | 2 cut(s) | 482, 584 |
| NdeII | GATC | 2 cut(s) | 158, 280 |
| NlaIII | CATG | 2 cut(s) | 91, 287 |
| NlaIV | GGNNCC | 1 cut(s) | 410 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 129 |
| PctI | GAATGC | 2 cut(s) | 482, 584 |
| PdmI | GAANNNNTTC | 2 cut(s) | 232, 455 |
| PfeI | GAWTC | 1 cut(s) | 266 |
| PleI | GAGTC | 1 cut(s) | 180 |
| PpsI | GAGTC | 1 cut(s) | 180 |
| PsiI | TTATAA | 1 cut(s) | 68 |
| PspN4I | GGNNCC | 1 cut(s) | 410 |
| PspPI | GGNCC | 1 cut(s) | 328 |
| PvuII | CAGCTG | 1 cut(s) | 28 |
| RsaI | GTAC | 1 cut(s) | 410 |
| RsaNI | GTAC | 1 cut(s) | 409 |
| SalI | GTCGAC | 1 cut(s) | 174 |
| Sau3AI | GATC | 2 cut(s) | 158, 280 |
| Sau96I | GGNCC | 1 cut(s) | 328 |
| SchI | GAGTC | 1 cut(s) | 181 |
| SfcI | CTRYAG | 1 cut(s) | 611 |
| SinI | GGWCC | 1 cut(s) | 328 |
| SmlI | CTYRAG | 1 cut(s) | 593 |
| SmoI | CTYRAG | 1 cut(s) | 593 |
| Sse9I | AATT | 6 cut(s) | 144, 275, 388, 556, 606, 652 |
| SsiI | CCGC | 1 cut(s) | 373 |
| SspMI | CTAG | 1 cut(s) | 465 |
| StyI | CCWWGG | 1 cut(s) | 412 |
| TaaI | ACNGT | 1 cut(s) | 615 |
| TaqI | TCGA | 3 cut(s) | 175, 236, 279 |
| TasI | AATT | 6 cut(s) | 144, 275, 388, 556, 606, 652 |
| TfiI | GAWTC | 1 cut(s) | 266 |
| TspDTI | ATGAA | 2 cut(s) | 104, 645 |
| TspGWI | ACGGA | 1 cut(s) | 201 |
| VpaK11BI | GGWCC | 1 cut(s) | 328 |
| XmiI | GTMKAC | 1 cut(s) | 175 |
| XmnI | GAANNNNTTC | 2 cut(s) | 232, 455 |
| XspI | CTAG | 1 cut(s) | 465 |