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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008746 |
| rosa_multiflora | Rmu_sc0000317.1_g000007 Rmu_sc0000894.1_g000063 Rmu_sc0002051.1_g000006 Rmu_sc0032513.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00350860 |
| rosa_samantha | Rh2AG311500 Rh2AG311600 Rh2AG311700 Rh2BG319800 Rh2BG319900 Rh2BG394500 Rh2CG298700 Rh2DG336000 Rh3BG265100 Rh4BG133100 Rh4BG133200 Rh4BG146300 Rh4BG146400 Rh4CG143900 Rh4CG144000 Rh6DG199500 |
| rosa_wichuraiana | Rw0G013210 Rw2G031710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 171 |
| AclI | AACGTT | 1 cut(s) | 236 |
| AclWI | GGATC | 2 cut(s) | 11, 24 |
| AcsI | RAATTY | 1 cut(s) | 310 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 254, 321, 322 |
| AgsI | TTSAA | 3 cut(s) | 25, 160, 370 |
| AluBI | AGCT | 1 cut(s) | 383 |
| AluI | AGCT | 1 cut(s) | 383 |
| AlwI | GGATC | 2 cut(s) | 11, 24 |
| ApeKI | GCWGC | 2 cut(s) | 383, 386 |
| ApoI | RAATTY | 1 cut(s) | 310 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 185, 217 |
| AsuHPI | GGTGA | 1 cut(s) | 116 |
| BamHI | GGATCC | 1 cut(s) | 16 |
| BbvI | GCAGC | 2 cut(s) | 370, 373 |
| BccI | CCATC | 2 cut(s) | 95, 202 |
| BciVI | GTATCC | 1 cut(s) | 289 |
| BfaI | CTAG | 1 cut(s) | 397 |
| BfuI | GTATCC | 1 cut(s) | 289 |
| BglII | AGATCT | 1 cut(s) | 142 |
| BisI | GCNGC | 2 cut(s) | 384, 387 |
| BlsI | GCNGC | 2 cut(s) | 385, 388 |
| BmiI | GGNNCC | 1 cut(s) | 18 |
| BmsI | GCATC | 1 cut(s) | 173 |
| BsaAI | YACGTR | 2 cut(s) | 167, 300 |
| BsaBI | GATNNNNATC | 1 cut(s) | 141 |
| BsaWI | WCCGGW | 1 cut(s) | 247 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 254, 321, 322 |
| Bse8I | GATNNNNATC | 1 cut(s) | 141 |
| BseGI | GGATG | 1 cut(s) | 216 |
| BseJI | GATNNNNATC | 1 cut(s) | 141 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 254, 321, 322 |
| BseRI | GAGGAG | 2 cut(s) | 23, 193 |
| BseXI | GCAGC | 2 cut(s) | 370, 373 |
| BsiSI | CCGG | 1 cut(s) | 248 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 254, 321, 322 |
| Bsp143I | GATC | 2 cut(s) | 16, 142 |
| BspACI | CCGC | 1 cut(s) | 171 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BspLI | GGNNCC | 1 cut(s) | 18 |
| BspPI | GGATC | 2 cut(s) | 11, 24 |
| BssMI | GATC | 2 cut(s) | 16, 142 |
| Bst6I | CTCTTC | 1 cut(s) | 125 |
| BstBAI | YACGTR | 2 cut(s) | 167, 300 |
| BstF5I | GGATG | 1 cut(s) | 216 |
| BstKTI | GATC | 2 cut(s) | 19, 145 |
| BstMBI | GATC | 2 cut(s) | 16, 142 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 332 |
| BstSNI | TACGTA | 1 cut(s) | 167 |
| BstV1I | GCAGC | 2 cut(s) | 370, 373 |
| BstX2I | RGATCY | 2 cut(s) | 16, 142 |
| BstYI | RGATCY | 2 cut(s) | 16, 142 |
| BsuI | GTATCC | 1 cut(s) | 289 |
| BtsCI | GGATG | 1 cut(s) | 216 |
| CciI | TCATGA | 1 cut(s) | 190 |
| CviAII | CATG | 3 cut(s) | 44, 56, 191 |
| CviJI | RGCY | 1 cut(s) | 383 |
| CviKI_1 | RGCY | 1 cut(s) | 383 |
| DpnI | GATC | 2 cut(s) | 18, 144 |
| DpnII | GATC | 2 cut(s) | 16, 142 |
| Eam1104I | CTCTTC | 1 cut(s) | 125 |
| EarI | CTCTTC | 1 cut(s) | 125 |
| Eco105I | TACGTA | 1 cut(s) | 167 |
| FaeI | CATG | 3 cut(s) | 47, 59, 194 |
| FatI | CATG | 3 cut(s) | 43, 55, 190 |
| FauI | CCCGC | 1 cut(s) | 164 |
| Fnu4HI | GCNGC | 2 cut(s) | 384, 387 |
| FokI | GGATG | 1 cut(s) | 203 |
| Fsp4HI | GCNGC | 2 cut(s) | 384, 387 |
| FspBI | CTAG | 1 cut(s) | 397 |
| GluI | GCNGC | 2 cut(s) | 384, 387 |
| HapII | CCGG | 1 cut(s) | 248 |
| Hin1II | CATG | 3 cut(s) | 47, 59, 194 |
| HincII | GTYRAC | 2 cut(s) | 37, 151 |
| HindII | GTYRAC | 2 cut(s) | 37, 151 |
| HinfI | GANTC | 2 cut(s) | 93, 269 |
| HpaI | GTTAAC | 1 cut(s) | 37 |
| HpaII | CCGG | 1 cut(s) | 248 |
| HphI | GGTGA | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 2 cut(s) | 37, 151 |
| Hpy188I | TCNGA | 2 cut(s) | 84, 342 |
| Hpy188III | TCNNGA | 2 cut(s) | 64, 191 |
| Hpy8I | GTNNAC | 2 cut(s) | 37, 151 |
| HpyAV | CCTTC | 1 cut(s) | 254 |
| HpyCH4IV | ACGT | 3 cut(s) | 166, 236, 299 |
| HpyCH4V | TGCA | 2 cut(s) | 275, 389 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 332 |
| HpySE526I | ACGT | 3 cut(s) | 166, 236, 299 |
| Hsp92II | CATG | 3 cut(s) | 47, 59, 194 |
| KspAI | GTTAAC | 1 cut(s) | 37 |
| Kzo9I | GATC | 2 cut(s) | 16, 142 |
| LpnPI | CCDG | 4 cut(s) | 139, 261, 329, 360 |
| Lsp1109I | GCAGC | 2 cut(s) | 370, 373 |
| LweI | GCATC | 1 cut(s) | 173 |
| MaeI | CTAG | 1 cut(s) | 397 |
| MaeII | ACGT | 3 cut(s) | 166, 236, 299 |
| MalI | GATC | 2 cut(s) | 18, 144 |
| MboI | GATC | 2 cut(s) | 16, 142 |
| MboII | GAAGA | 2 cut(s) | 142, 152 |
| MflI | RGATCY | 2 cut(s) | 16, 142 |
| MluCI | AATT | 3 cut(s) | 196, 310, 319 |
| MlyI | GAGTC | 1 cut(s) | 278 |
| MnlI | CCTC | 2 cut(s) | 171, 248 |
| MseI | TTAA | 1 cut(s) | 36 |
| MspI | CCGG | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 332 |
| NdeII | GATC | 2 cut(s) | 16, 142 |
| NlaIII | CATG | 3 cut(s) | 47, 59, 194 |
| NlaIV | GGNNCC | 1 cut(s) | 18 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PfeI | GAWTC | 1 cut(s) | 93 |
| PkrI | GCNGC | 2 cut(s) | 385, 388 |
| PleI | GAGTC | 1 cut(s) | 277 |
| PpsI | GAGTC | 1 cut(s) | 277 |
| Ppu21I | YACGTR | 2 cut(s) | 167, 300 |
| Psp1406I | AACGTT | 1 cut(s) | 236 |
| PspN4I | GGNNCC | 1 cut(s) | 18 |
| PsuI | RGATCY | 2 cut(s) | 16, 142 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SatI | GCNGC | 2 cut(s) | 384, 387 |
| Sau3AI | GATC | 2 cut(s) | 16, 142 |
| SchI | GAGTC | 1 cut(s) | 278 |
| SetI | ASST | 6 cut(s) | 158, 169, 239, 302, 332, 385 |
| SfaNI | GCATC | 1 cut(s) | 173 |
| SnaBI | TACGTA | 1 cut(s) | 167 |
| Sse9I | AATT | 3 cut(s) | 196, 310, 319 |
| SsiI | CCGC | 1 cut(s) | 171 |
| SspMI | CTAG | 1 cut(s) | 397 |
| TaiI | ACGT | 3 cut(s) | 169, 239, 302 |
| TaqI | TCGA | 1 cut(s) | 65 |
| TasI | AATT | 3 cut(s) | 196, 310, 319 |
| TfiI | GAWTC | 1 cut(s) | 93 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TseI | GCWGC | 2 cut(s) | 383, 386 |
| TspDTI | ATGAA | 3 cut(s) | 42, 153, 205 |
| TspGWI | ACGGA | 1 cut(s) | 9 |
| XapI | RAATTY | 1 cut(s) | 310 |
| XspI | CTAG | 1 cut(s) | 397 |