Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0008183

Physical Location & Seq

Genomic Coordinates Forward (+)

35600779 .. 35604007

Gene Structure 3229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG199500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGCAGGGAACTAAAAGAAAAGCGGGGGGATCTTCCAAAGAAACCTATAACTTAGAAGGAAATGATGAAATATCGGTTAAGGGCGAGGATGGGTTGGTTAGGAAGACCAAAGTACTAAGTCCACAGTTGTTTAACGATACGGTACGAGAAATGTCTATTAAGAAAGTGGTGGCAATTTGCGAGATTGGATTTGGGTCAATACAGATGATAGGGTCTCCCACATTGCACCCGAAAGTCTGCCAACTAATGGTGGAGGGGTTGAATCCGTTGAATGAACTTGTTATCATACATGGAAAGGAGCATGTCATTTCGGCAAAGGACTTTGCTCGGATAATGGGAATCAACGATGGTGGAAGTGATATAGAGTTGAGTGAGAAGAGTGATGAAGATCTCGTAAACAGGTTGAAACTACGTTTGGCGGGGGGAGGAGATGCTATCACAATAGCAACATTGAGGGAGATTGTGGTTGAAAGAAAGGGAGCTGACAATTTGTTCGTGATGGGTTTCATCCTTTATGCCATGGCAACGCTGTTGTGTCCAGTAGGAGGCGAAGAAGTAGAGTCTGCATTGTTGTTTGCTCTTATGGATACGTCCTATATAAATTCCCAGAATTGGGCGACCTATGCTTATCAGAAGTTGATCATGGGTGTGTTGATGTTCAAATCAGGCAAAGCTGCTGCATTATCCGGGTGTATGTTATTCCTGCAAGTGTTCTACTTTGATTCGGTTAACAAAATGTACGGATGGGTGGACAAGAATGCAAGACCAGTGTGTCAATGGGGAGATGATCAGGTATTTAAACTGTTAAAGTGGGTGGAGGATCATGGAGGGGTATACTCTTCTAACCACGAAGTTTGGGTACCGACGAAGGTATCGAGGATAACGATACATGGAGCGAATGTTGCTGAAAGGGAAGGGACCGATAAGTGGGAAAGAGGTGGGGAGGCGATGGCAGTTGAGGAGGAAGTTGAACAGCTGAAAATGGGTTTTGTTAAGCTGGAGAAAGCTATTGTGGTTATAATGCCAGAGATAGCTACCATGAAGGAAACCGTTGACAGGATGAGTAGGTTGGTTGGTGTACATGATATGGAGAGAATTGAACACATTGTATCACAGGTGGTGAGTCGACTAAATGATGGAGGTGGGAACAAGTTTGATCAGGAAAAGAACAAAAACAGAAACATATCGAGCTCACAGCAACGTGATAAAGGTGTAGAATCAACACACTTCAATCATGGAAGGGAACGCGAGGAAGGTTCGGGGAGTTACTCATTGAAGTTCTTGTATGTCAACAAAGGCGAACGTCGGGATGGGACAAGAACGCAGCCACATGATCTATGTACGGAAGGTAAGGGAGAGCCGCAGGTTTCAGAGCGATCAGCAGTATCAGTAAGCTCGAGAGGGCCTCCCAAGGCAGCGCATAGAAGGACGAAAGATAAAACTCGGAGGCCGAAAACAGTAATATCGAAGAGATATGTTCGGAAATTATTCCCCAAGTCACCGTCAAGGGTTGCAGCAAATTTCCTCAATGGAAGGCAGAGGGTAACCATAAACAGGAAAAAGGAAGGTGTTTTGGCAGGGCCGTTCATGGTAAACCGGGATACATCTGACACGGTCATAGAAATGTTGAAGTTTGTGTTTATGCCGCGGCCACTAACTACAAAGATGGCACGCGTAAATTGGGACGACCTTGAAGCTTCTCTTGCACCAGATGGACTAGTTTGTAGCCATGTTATAAACATGTTTGCTACGTACCTGAATGAGCCAAAAGGCCATGTTTGGTACTTCAACACATACTTTGGGGGTGGCGCAACCAATTTCGATGTCTCAACTGGGTACATTGGATGGGAGGAGCGTATTAGAAGCGTATGTAGACTGAATGATTTAGCTCCTACATTGAAGGAATGCACAAAGTTGGTCATGTTGGACGCGGTTTTTAAGAATGAAATTGTAGGAGCAGGTATTCAGCGTGCACTGGTGTTCAAAGACTTTACAATGGTGGATCCCATTGCAAGTCCCAGGCAGGAGGGAGTTGTGGACTGTGGGGTTTTTCTAATACAGAATATGCAGAACTGTGGTCGTGATTGGGCAAAGAAGTATATGTCAGAAGACCACAGAGCTTCCCTTGTTATGGAATGTATAGGGAACAACCGAAACGAGGTCGAGAATTTGGAGGAAATGATGGTGGAATGCTTGCACAATCTTGAGCAACTACCAATTCTGCAGTTATACGAAATGAATGAAGGAGGAGTGGGGAAACCGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_C48

Protein Analysis

755

Amino Acids

84.58

Weight (kDa)

7.55

Isoelectric Point (pI)

38.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008183)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000008746
rosa_multiflora	Rmu_sc0000317.1_g000007 Rmu_sc0000894.1_g000063 Rmu_sc0002051.1_g000006 Rmu_sc0032513.1_g000001
rosa_roxburghii	Rroxscaffold_5G00350860
rosa_samantha	Rh2AG311500 Rh2AG311600 Rh2AG311700 Rh2BG319800 Rh2BG319900 Rh2BG394500 Rh2CG298700 Rh2DG336000 Rh3BG265100 Rh4BG133100 Rh4BG133200 Rh4BG146300 Rh4BG146400 Rh4CG143900 Rh4CG144000 Rh6DG199500
rosa_wichuraiana	Rw0G013210 Rw2G031710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1019, 1736
AasI	GACNNNNNNGTC	1 cut(s)	771
Acc36I	ACCTGC	2 cut(s)	1354, 1949
Acc65I	GGTACC	1 cut(s)	859
AccB1I	GGYRCC	1 cut(s)	859
AccB7I	CCANNNNNTGG	1 cut(s)	247
AccI	GTMKAC	3 cut(s)	834, 1126, 1873
AccII	CGCG	4 cut(s)	1248, 1648, 1674, 1931
AciI	CCGC	6 cut(s)	23, 419, 1361, 1646, 1648, 1931
AclWI	GGATC	4 cut(s)	37, 828, 1997, 2010
AcoI	YGGCCR	1 cut(s)	1649
AcsI	RAATTY	3 cut(s)	601, 1519, 2167
AfaI	GTAC	9 cut(s)	114, 144, 740, 861, 1080, 1342, 1754, 1784, 1838
AfiI	CCNNNNNNNGG	9 cut(s)	247, 545, 612, 613, 927, 1056, 1554, 2131, 2158
AflIII	ACRYGT	2 cut(s)	1672, 1740
AhlI	ACTAGT	1 cut(s)	1717
AjnI	CCWGG	1 cut(s)	2018
AjuI	GAANNNNNNNTTGG	2 cut(s)	398, 430
Alw21I	GWGCWC	2 cut(s)	1193, 1975
Alw26I	GTCTC	2 cut(s)	219, 1831
Alw44I	GTGCAC	1 cut(s)	1971
AlwI	GGATC	4 cut(s)	37, 828, 1997, 2010
Ama87I	CYCGRG	1 cut(s)	1396
AoxI	GGCC	5 cut(s)	1403, 1448, 1580, 1649, 1771
ApaLI	GTGCAC	1 cut(s)	1971
ApeKI	GCWGC	5 cut(s)	674, 677, 1324, 1415, 1514
ApoI	RAATTY	3 cut(s)	601, 1519, 2167
ArsI	GACNNNNNNTTYG	2 cut(s)	476, 508
Asp700I	GAANNNNTTC	1 cut(s)	1487
Asp718I	GGTACC	1 cut(s)	859
AspLEI	GCGC	2 cut(s)	1420, 1811
AspS9I	GGNCC	3 cut(s)	918, 1403, 1580
AsuC2I	CCSGG	2 cut(s)	688, 1598
AsuHPI	GGTGA	2 cut(s)	1132, 1491
AvaI	CYCGRG	1 cut(s)	1396
AvaII	GGWCC	1 cut(s)	918
BaeGI	GKGCMC	1 cut(s)	1975
BaeI	ACNNNNGTAYC	2 cut(s)	855, 888
BamHI	GGATCC	1 cut(s)	2002
BanI	GGYRCC	1 cut(s)	859
BanII	GRGCYC	1 cut(s)	1193
BarI	GAAGNNNNNNTAC	2 cut(s)	843, 875
BbsI	GAAGAC	2 cut(s)	110, 2115
Bbv12I	GWGCWC	2 cut(s)	1193, 1975
BbvI	GCAGC	5 cut(s)	661, 664, 1336, 1427, 1526
BceAI	ACGGC	1 cut(s)	1567
BciT130I	CCWGG	1 cut(s)	2020
BciVI	GTATCC	2 cut(s)	580, 1594
BclI	TGATCA	3 cut(s)	639, 787, 1156
BcnI	CCSGG	2 cut(s)	688, 1598
BcoDI	GTCTC	2 cut(s)	219, 1831
BcuI	ACTAGT	1 cut(s)	1717
BfaI	CTAG	1 cut(s)	1718
BfmI	CTRYAG	1 cut(s)	2222
BfuAI	ACCTGC	2 cut(s)	1354, 1949
BfuI	GTATCC	2 cut(s)	580, 1594
BglII	AGATCT	1 cut(s)	388
BisI	GCNGC	8 cut(s)	675, 678, 1325, 1361, 1416, 1515, 1646, 1649
BlsI	GCNGC	8 cut(s)	676, 679, 1326, 1362, 1417, 1516, 1647, 1650
BmcAI	AGTACT	1 cut(s)	114
Bme1390I	CCNGG	3 cut(s)	688, 1598, 2020
Bme18I	GGWCC	1 cut(s)	918
BmeT110I	CYCGRG	1 cut(s)	1396
BmgT120I	GGNCC	3 cut(s)	918, 1403, 1580
BmiI	GGNNCC	3 cut(s)	861, 919, 2004
BmrFI	CCNGG	3 cut(s)	688, 1598, 2020
BmrI	ACTGGG	1 cut(s)	1842
BmsI	GCATC	1 cut(s)	421
BmuI	ACTGGG	1 cut(s)	1842
BpiI	GAAGAC	2 cut(s)	110, 2115
BplI	GAGNNNNNCTC	2 cut(s)	1390, 1422
BpmI	CTGGAG	1 cut(s)	1019
BpuEI	CTTGAG	1 cut(s)	2225
BpuMI	CCSGG	2 cut(s)	688, 1598
BsaAI	YACGTR	1 cut(s)	1752
BsaBI	GATNNNNATC	1 cut(s)	387
BsaI	GGTCTC	1 cut(s)	219
BsaJI	CCNNGG	4 cut(s)	519, 1410, 1646, 2018
BsaXI	ACNNNNNCTCC	2 cut(s)	885, 915
Bsc4I	CCNNNNNNNGG	9 cut(s)	247, 545, 612, 613, 927, 1056, 1554, 2131, 2158
Bse1I	ACTGG	4 cut(s)	539, 767, 1837, 1980
Bse3DI	GCAATG	2 cut(s)	221, 2007
Bse8I	GATNNNNATC	1 cut(s)	387
BseBI	CCWGG	1 cut(s)	2020
BseDI	CCNNGG	4 cut(s)	519, 1410, 1646, 2018
BseGI	GGATG	6 cut(s)	94, 507, 749, 1065, 1315, 1850
BseJI	GATNNNNATC	1 cut(s)	387
BseLI	CCNNNNNNNGG	9 cut(s)	247, 545, 612, 613, 927, 1056, 1554, 2131, 2158
BseMI	GCAATG	2 cut(s)	221, 2007
BseNI	ACTGG	4 cut(s)	539, 767, 1837, 1980
BseRI	GAGGAG	4 cut(s)	441, 974, 1865, 2262
BseSI	GKGCMC	1 cut(s)	1975
BseXI	GCAGC	5 cut(s)	661, 664, 1336, 1427, 1526
Bsh1236I	CGCG	4 cut(s)	1248, 1648, 1674, 1931
BshFI	GGCC	5 cut(s)	1405, 1450, 1582, 1651, 1773
BshNI	GGYRCC	1 cut(s)	859
BsiHKAI	GWGCWC	2 cut(s)	1193, 1975
BsiHKCI	CYCGRG	1 cut(s)	1396
BsiSI	CCGG	2 cut(s)	687, 1597
BslFI	GGGAC	4 cut(s)	931, 1327, 1697, 2001
BslI	CCNNNNNNNGG	9 cut(s)	247, 545, 612, 613, 927, 1056, 1554, 2131, 2158
BsmAI	GTCTC	2 cut(s)	219, 1831
BsmFI	GGGAC	4 cut(s)	931, 1327, 1697, 2001
BsmI	GAATGC	3 cut(s)	763, 1910, 2195
BsnI	GGCC	5 cut(s)	1405, 1450, 1582, 1651, 1773
Bso31I	GGTCTC	1 cut(s)	219
BsoBI	CYCGRG	1 cut(s)	1396
Bsp1286I	GDGCHC	2 cut(s)	1193, 1975
Bsp1407I	TGTACA	1 cut(s)	1078
Bsp143I	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
Bsp19I	CCATGG	1 cut(s)	519
BspACI	CCGC	6 cut(s)	23, 419, 1361, 1646, 1648, 1931
BspANI	GGCC	5 cut(s)	1405, 1450, 1582, 1651, 1773
BspFNI	CGCG	4 cut(s)	1248, 1648, 1674, 1931
BspLI	GGNNCC	3 cut(s)	861, 919, 2004
BspMAI	CTGCAG	1 cut(s)	2226
BspMI	ACCTGC	2 cut(s)	1354, 1949
BspPI	GGATC	4 cut(s)	37, 828, 1997, 2010
BspT107I	GGYRCC	1 cut(s)	859
BspTNI	GGTCTC	1 cut(s)	219
BsrDI	GCAATG	2 cut(s)	221, 2007
BsrGI	TGTACA	1 cut(s)	1078
BsrI	ACTGG	4 cut(s)	539, 767, 1837, 1980
BssECI	CCNNGG	4 cut(s)	519, 1410, 1646, 2018
BssMI	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
BssNAI	GTATAC	1 cut(s)	835
BssT1I	CCWWGG	2 cut(s)	519, 1410
Bst1107I	GTATAC	1 cut(s)	835
Bst2UI	CCWGG	1 cut(s)	2020
Bst4CI	ACNGT	9 cut(s)	126, 142, 804, 1051, 1459, 1503, 1615, 2042, 2075
Bst6I	CTCTTC	3 cut(s)	371, 844, 1463
BstAUI	TGTACA	1 cut(s)	1078
BstBAI	YACGTR	1 cut(s)	1752
BstC8I	GCNNGC	3 cut(s)	1672, 1971, 2195
BstDEI	CTNAG	2 cut(s)	52, 116
BstDSI	CCRYGG	2 cut(s)	519, 1646
BstEII	GGTNACC	1 cut(s)	1543
BstF5I	GGATG	6 cut(s)	94, 507, 749, 1065, 1315, 1850
BstFNI	CGCG	4 cut(s)	1248, 1648, 1674, 1931
BstHHI	GCGC	2 cut(s)	1420, 1811
BstKTI	GATC	9 cut(s)	32, 391, 642, 790, 823, 1159, 1336, 1379, 2005
BstMAI	GTCTC	2 cut(s)	219, 1831
BstMBI	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
BstMWI	GCNNNNNNNGC	3 cut(s)	623, 902, 1703
BstNI	CCWGG	1 cut(s)	2020
BstNSI	RCATGY	2 cut(s)	305, 1744
BstPI	GGTNACC	1 cut(s)	1543
BstSCI	CCNGG	3 cut(s)	686, 1596, 2018
BstSFI	CTRYAG	1 cut(s)	2222
BstSLI	GKGCMC	1 cut(s)	1975
BstSNI	TACGTA	1 cut(s)	1752
BstUI	CGCG	4 cut(s)	1248, 1648, 1674, 1931
BstV1I	GCAGC	5 cut(s)	661, 664, 1336, 1427, 1526
BstV2I	GAAGAC	2 cut(s)	110, 2115
BstX2I	RGATCY	3 cut(s)	29, 388, 2002
BstYI	RGATCY	3 cut(s)	29, 388, 2002
BstZ17I	GTATAC	1 cut(s)	835
BsuI	GTATCC	2 cut(s)	580, 1594
BsuRI	GGCC	5 cut(s)	1405, 1450, 1582, 1651, 1773
BtgI	CCRYGG	2 cut(s)	519, 1646
BtgZI	GCGATG	1 cut(s)	962
BtsCI	GGATG	6 cut(s)	94, 507, 749, 1065, 1315, 1850
BtsIMutI	CAGTG	2 cut(s)	774, 1973
BveI	ACCTGC	2 cut(s)	1354, 1949
Cac8I	GCNNGC	3 cut(s)	1672, 1971, 2195
CfoI	GCGC	2 cut(s)	1420, 1811
Cfr13I	GGNCC	3 cut(s)	918, 1403, 1580
Cfr42I	CCGCGG	1 cut(s)	1649
CseI	GACGC	1 cut(s)	1937
Csp6I	GTAC	9 cut(s)	113, 143, 739, 860, 1079, 1341, 1753, 1783, 1837
CspCI	CAANNNNNGTGG	4 cut(s)	331, 366, 836, 871
CviQI	GTAC	9 cut(s)	113, 143, 739, 860, 1079, 1341, 1753, 1783, 1837
DdeI	CTNAG	2 cut(s)	52, 116
DpnI	GATC	9 cut(s)	31, 390, 641, 789, 822, 1158, 1335, 1378, 2004
DpnII	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
DraI	TTTAAA	1 cut(s)	799
DrdI	GACNNNNNNGTC	1 cut(s)	771
DseDI	GACNNNNNNGTC	1 cut(s)	771
EaeI	YGGCCR	1 cut(s)	1649
Eam1104I	CTCTTC	3 cut(s)	371, 844, 1463
EarI	CTCTTC	3 cut(s)	371, 844, 1463
Ecl136II	GAGCTC	1 cut(s)	1191
Eco105I	TACGTA	1 cut(s)	1752
Eco130I	CCWWGG	2 cut(s)	519, 1410
Eco24I	GRGCYC	1 cut(s)	1193
Eco31I	GGTCTC	1 cut(s)	219
Eco47I	GGWCC	1 cut(s)	918
Eco53kI	GAGCTC	1 cut(s)	1191
Eco88I	CYCGRG	1 cut(s)	1396
Eco91I	GGTNACC	1 cut(s)	1543
EcoICRI	GAGCTC	1 cut(s)	1191
EcoO109I	RGGNCCY	1 cut(s)	1403
EcoO65I	GGTNACC	1 cut(s)	1543
EcoRII	CCWGG	1 cut(s)	2018
EcoT14I	CCWWGG	2 cut(s)	519, 1410
EcoT38I	GRGCYC	1 cut(s)	1193
ErhI	CCWWGG	2 cut(s)	519, 1410
FalI	AAGNNNNNCTT	2 cut(s)	1686, 1718
FaqI	GGGAC	4 cut(s)	931, 1327, 1697, 2001
FauI	CCCGC	2 cut(s)	16, 412
FbaI	TGATCA	3 cut(s)	639, 787, 1156
FblI	GTMKAC	3 cut(s)	834, 1126, 1873
Fnu4HI	GCNGC	8 cut(s)	675, 678, 1325, 1361, 1416, 1515, 1646, 1649
FokI	GGATG	6 cut(s)	101, 494, 756, 1072, 1322, 1857
FriOI	GRGCYC	1 cut(s)	1193
Fsp4HI	GCNGC	8 cut(s)	675, 678, 1325, 1361, 1416, 1515, 1646, 1649
FspBI	CTAG	1 cut(s)	1718
GlaI	GCGC	2 cut(s)	1419, 1810
GluI	GCNGC	8 cut(s)	675, 678, 1325, 1361, 1416, 1515, 1646, 1649
GsuI	CTGGAG	1 cut(s)	1019
HaeIII	GGCC	5 cut(s)	1405, 1450, 1582, 1651, 1773
HapII	CCGG	2 cut(s)	687, 1597
HgaI	GACGC	1 cut(s)	1937
HhaI	GCGC	2 cut(s)	1420, 1811
Hin6I	GCGC	2 cut(s)	1418, 1809
HinP1I	GCGC	2 cut(s)	1418, 1809
HincII	GTYRAC	4 cut(s)	730, 1054, 1127, 1291
HindII	GTYRAC	4 cut(s)	730, 1054, 1127, 1291
HindIII	AAGCTT	1 cut(s)	1695
HinfI	GANTC	6 cut(s)	262, 339, 560, 722, 1123, 1217
HpaI	GTTAAC	1 cut(s)	730
HpaII	CCGG	2 cut(s)	687, 1597
HphI	GGTGA	2 cut(s)	1132, 1491
Hpy188I	TCNGA	7 cut(s)	330, 633, 1372, 1446, 1482, 1609, 2107
Hpy188III	TCNNGA	7 cut(s)	496, 1160, 1307, 1398, 2081, 2164, 2204
Hpy99I	CGWCG	2 cut(s)	868, 1308
HpyCH4III	ACNGT	9 cut(s)	126, 142, 804, 1051, 1459, 1503, 1615, 2042, 2075
HpyCH4IV	ACGT	5 cut(s)	412, 590, 1201, 1303, 1751
HpyF10VI	GCNNNNNNNGC	3 cut(s)	623, 902, 1703
HpyF3I	CTNAG	2 cut(s)	52, 116
HpySE526I	ACGT	5 cut(s)	412, 590, 1201, 1303, 1751
HspAI	GCGC	2 cut(s)	1418, 1809
KpnI	GGTACC	1 cut(s)	863
Ksp22I	TGATCA	3 cut(s)	639, 787, 1156
KspAI	GTTAAC	1 cut(s)	730
KspI	CCGCGG	1 cut(s)	1649
Kzo9I	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
LmnI	GCTCC	6 cut(s)	298, 479, 893, 1852, 1894, 1955
Lsp1109I	GCAGC	5 cut(s)	661, 664, 1336, 1427, 1526
LweI	GCATC	1 cut(s)	421
MaeI	CTAG	1 cut(s)	1718
MaeII	ACGT	5 cut(s)	412, 590, 1201, 1303, 1751
MaeIII	GTNAC	3 cut(s)	1265, 1497, 1543
MalI	GATC	9 cut(s)	31, 390, 641, 789, 822, 1158, 1335, 1378, 2004
MboI	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
MboII	GAAGA	8 cut(s)	24, 115, 388, 398, 563, 831, 1480, 2120
MflI	RGATCY	3 cut(s)	29, 388, 2002
MhlI	GDGCHC	2 cut(s)	1193, 1975
MluI	ACGCGT	1 cut(s)	1672
MlyI	GAGTC	2 cut(s)	569, 1132
MmeI	TCCRAC	1 cut(s)	1905
MroXI	GAANNNNTTC	1 cut(s)	1487
MseI	TTAA	8 cut(s)	78, 132, 159, 729, 798, 806, 993, 1938
MslI	CAYNNNNRTG	2 cut(s)	647, 1622
MspA1I	CMGCKG	2 cut(s)	976, 1648
MspI	CCGG	2 cut(s)	687, 1597
MspR9I	CCNGG	3 cut(s)	688, 1598, 2020
Mva1269I	GAATGC	3 cut(s)	763, 1910, 2195
MvaI	CCWGG	1 cut(s)	2020
MvnI	CGCG	4 cut(s)	1248, 1648, 1674, 1931
MwoI	GCNNNNNNNGC	3 cut(s)	623, 902, 1703
NciI	CCSGG	2 cut(s)	688, 1598
NcoI	CCATGG	1 cut(s)	519
NdeII	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
NlaIV	GGNNCC	3 cut(s)	861, 919, 2004
NmuCI	GTSAC	1 cut(s)	1497
NspI	RCATGY	2 cut(s)	305, 1744
PaeR7I	CTCGAG	1 cut(s)	1396
PciI	ACATGT	1 cut(s)	1740
PcsI	WCGNNNNNNNCGW	2 cut(s)	872, 881
PctI	GAATGC	3 cut(s)	763, 1910, 2195
PdmI	GAANNNNTTC	1 cut(s)	1487
PfeI	GAWTC	4 cut(s)	262, 339, 722, 1217
PflFI	GACNNNGTC	1 cut(s)	1613
PflMI	CCANNNNNTGG	1 cut(s)	247
PkrI	GCNGC	8 cut(s)	676, 679, 1326, 1362, 1417, 1516, 1647, 1650
PleI	GAGTC	2 cut(s)	568, 1131
PpsI	GAGTC	2 cut(s)	568, 1131
Ppu21I	YACGTR	1 cut(s)	1752
PscI	ACATGT	1 cut(s)	1740
PsiI	TTATAA	2 cut(s)	1019, 1736
Psp124BI	GAGCTC	1 cut(s)	1193
Psp6I	CCWGG	1 cut(s)	2018
PspEI	GGTNACC	1 cut(s)	1543
PspGI	CCWGG	1 cut(s)	2018
PspN4I	GGNNCC	3 cut(s)	861, 919, 2004
PspPI	GGNCC	3 cut(s)	918, 1403, 1580
PstI	CTGCAG	1 cut(s)	2226
PsuI	RGATCY	3 cut(s)	29, 388, 2002
PsyI	GACNNNGTC	1 cut(s)	1613
PvuII	CAGCTG	1 cut(s)	976
RsaI	GTAC	9 cut(s)	114, 144, 740, 861, 1080, 1342, 1754, 1784, 1838
RsaNI	GTAC	9 cut(s)	113, 143, 739, 860, 1079, 1341, 1753, 1783, 1837
RseI	CAYNNNNRTG	2 cut(s)	647, 1622
SacI	GAGCTC	1 cut(s)	1193
SacII	CCGCGG	1 cut(s)	1649
SalI	GTCGAC	1 cut(s)	1125
SaqAI	TTAA	8 cut(s)	78, 132, 159, 729, 798, 806, 993, 1938
SatI	GCNGC	8 cut(s)	675, 678, 1325, 1361, 1416, 1515, 1646, 1649
Sau3AI	GATC	9 cut(s)	29, 388, 639, 787, 820, 1156, 1333, 1376, 2002
Sau96I	GGNCC	3 cut(s)	918, 1403, 1580
ScaI	AGTACT	1 cut(s)	114
SchI	GAGTC	2 cut(s)	569, 1132
ScrFI	CCNGG	3 cut(s)	688, 1598, 2020
SduI	GDGCHC	2 cut(s)	1193, 1975
SfaNI	GCATC	1 cut(s)	421
SfcI	CTRYAG	1 cut(s)	2222
Sfr274I	CTCGAG	1 cut(s)	1396
Sfr303I	CCGCGG	1 cut(s)	1649
SgrBI	CCGCGG	1 cut(s)	1649
SinI	GGWCC	1 cut(s)	918
SlaI	CTCGAG	1 cut(s)	1396
SmiMI	CAYNNNNRTG	2 cut(s)	647, 1622
SmlI	CTYRAG	2 cut(s)	1396, 2204
SmoI	CTYRAG	2 cut(s)	1396, 2204
SnaBI	TACGTA	1 cut(s)	1752
SpeI	ACTAGT	1 cut(s)	1717
SsiI	CCGC	6 cut(s)	23, 419, 1361, 1646, 1648, 1931
SspMI	CTAG	1 cut(s)	1718
SstI	GAGCTC	1 cut(s)	1193
StyD4I	CCNGG	3 cut(s)	686, 1596, 2018
StyI	CCWWGG	2 cut(s)	519, 1410
TaaI	ACNGT	9 cut(s)	126, 142, 804, 1051, 1459, 1503, 1615, 2042, 2075
TaiI	ACGT	5 cut(s)	415, 593, 1204, 1306, 1754
TaqI	TCGA	7 cut(s)	875, 1126, 1187, 1397, 1466, 1821, 2163
TaqII	GACCGA	1 cut(s)	935
TatI	WGTACW	2 cut(s)	112, 1078
TauI	GCSGC	3 cut(s)	1363, 1648, 1651
TfiI	GAWTC	4 cut(s)	262, 339, 722, 1217
Tru1I	TTAA	8 cut(s)	78, 132, 159, 729, 798, 806, 993, 1938
Tru9I	TTAA	8 cut(s)	78, 132, 159, 729, 798, 806, 993, 1938
TscAI	CASTG	2 cut(s)	774, 1980
TseFI	GTSAC	1 cut(s)	1497
TseI	GCWGC	5 cut(s)	674, 677, 1324, 1415, 1514
Tsp45I	GTSAC	1 cut(s)	1497
TspDTI	ATGAA	9 cut(s)	81, 288, 399, 496, 1055, 1576, 1959, 2252, 2256
TspGWI	ACGGA	3 cut(s)	255, 756, 1358
TspRI	CASTG	2 cut(s)	774, 1980
Tth111I	GACNNNGTC	1 cut(s)	1613
Van91I	CCANNNNNTGG	1 cut(s)	247
VneI	GTGCAC	1 cut(s)	1971
VpaK11BI	GGWCC	1 cut(s)	918
XapI	RAATTY	3 cut(s)	601, 1519, 2167
XceI	RCATGY	2 cut(s)	305, 1744
XcmI	CCANNNNNNNNNTGG	1 cut(s)	774
XhoI	CTCGAG	1 cut(s)	1396
XmiI	GTMKAC	3 cut(s)	834, 1126, 1873
XmnI	GAANNNNTTC	1 cut(s)	1487
XspI	CTAG	1 cut(s)	1718
ZrmI	AGTACT	1 cut(s)	114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.