Villin headpiece domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0071761 |
| rosa_multiflora | Rmu_sc0000694.1_g000024 Rmu_sc0002285.1_g000031 Rmu_sc0005500.1_g000002 Rmu_sc0013612.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00322960 Rroxscaffold_5G00335950 Rroxscaffold_5G00366950 Rroxscaffold_6G00388330 Rroxscaffold_6G00389350 Rroxscaffold_7G00165060 Rroxscaffold_7G00197390 |
| rosa_rugosa | Rorug01G0183100 Rorug01G0183200 Rorug03G0077400 Rorug05G0261600 Rorug05G0261700 |
| rosa_samantha | Rh2AG454500 Rh2BG458700 Rh2CG441600 Rh4CG103500 Rh4CG324600 Rh4DG275900 Rh4DG307600 Rh5CG264700 Rh6CG064500 Rh6CG148200 Rh6DG061500 Rh7CG217000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 229 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 41 |
| AgsI | TTSAA | 2 cut(s) | 137, 196 |
| AluBI | AGCT | 3 cut(s) | 70, 122, 300 |
| AluI | AGCT | 3 cut(s) | 70, 122, 300 |
| Ama87I | CYCGRG | 1 cut(s) | 261 |
| AoxI | GGCC | 1 cut(s) | 162 |
| AvaI | CYCGRG | 1 cut(s) | 261 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 219, 252 |
| BccI | CCATC | 1 cut(s) | 173 |
| BmeT110I | CYCGRG | 1 cut(s) | 261 |
| BsaBI | GATNNNNATC | 2 cut(s) | 251, 275 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 41 |
| Bse1I | ACTGG | 1 cut(s) | 229 |
| Bse8I | GATNNNNATC | 2 cut(s) | 251, 275 |
| BseGI | GGATG | 2 cut(s) | 165, 213 |
| BseJI | GATNNNNATC | 2 cut(s) | 251, 275 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BseNI | ACTGG | 1 cut(s) | 229 |
| BseRI | GAGGAG | 1 cut(s) | 249 |
| BshFI | GGCC | 1 cut(s) | 164 |
| BsiHKCI | CYCGRG | 1 cut(s) | 261 |
| BslFI | GGGAC | 1 cut(s) | 154 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BsmFI | GGGAC | 1 cut(s) | 154 |
| BsmI | GAATGC | 1 cut(s) | 296 |
| BsnI | GGCC | 1 cut(s) | 164 |
| BsoBI | CYCGRG | 1 cut(s) | 261 |
| Bsp143I | GATC | 2 cut(s) | 270, 276 |
| BspANI | GGCC | 1 cut(s) | 164 |
| BspHI | TCATGA | 1 cut(s) | 273 |
| BsrI | ACTGG | 1 cut(s) | 229 |
| BssMI | GATC | 2 cut(s) | 270, 276 |
| Bst4CI | ACNGT | 1 cut(s) | 181 |
| Bst6I | CTCTTC | 1 cut(s) | 205 |
| BstC8I | GCNNGC | 1 cut(s) | 162 |
| BstF5I | GGATG | 2 cut(s) | 165, 213 |
| BstKTI | GATC | 2 cut(s) | 273, 279 |
| BstMBI | GATC | 2 cut(s) | 270, 276 |
| BstNSI | RCATGY | 1 cut(s) | 160 |
| BsuRI | GGCC | 1 cut(s) | 164 |
| BtsCI | GGATG | 2 cut(s) | 165, 213 |
| Cac8I | GCNNGC | 1 cut(s) | 162 |
| CciI | TCATGA | 1 cut(s) | 273 |
| Csp6I | GTAC | 1 cut(s) | 228 |
| CviAII | CATG | 2 cut(s) | 157, 274 |
| CviJI | RGCY | 5 cut(s) | 70, 122, 164, 189, 300 |
| CviKI_1 | RGCY | 5 cut(s) | 70, 122, 164, 189, 300 |
| CviQI | GTAC | 1 cut(s) | 228 |
| DpnI | GATC | 2 cut(s) | 272, 278 |
| DpnII | GATC | 2 cut(s) | 270, 276 |
| Eam1104I | CTCTTC | 1 cut(s) | 205 |
| EarI | CTCTTC | 1 cut(s) | 205 |
| Eco88I | CYCGRG | 1 cut(s) | 261 |
| FaeI | CATG | 2 cut(s) | 160, 277 |
| FaiI | YATR | 4 cut(s) | 11, 105, 158, 275 |
| FaqI | GGGAC | 1 cut(s) | 154 |
| FatI | CATG | 2 cut(s) | 156, 273 |
| FokI | GGATG | 2 cut(s) | 152, 200 |
| HaeIII | GGCC | 1 cut(s) | 164 |
| Hin1II | CATG | 2 cut(s) | 160, 277 |
| HincII | GTYRAC | 1 cut(s) | 56 |
| HindII | GTYRAC | 1 cut(s) | 56 |
| HindIII | AAGCTT | 1 cut(s) | 68 |
| HinfI | GANTC | 5 cut(s) | 17, 31, 52, 145, 252 |
| Hpy166II | GTNNAC | 1 cut(s) | 56 |
| Hpy188III | TCNNGA | 2 cut(s) | 274, 283 |
| Hpy8I | GTNNAC | 1 cut(s) | 56 |
| HpyCH4III | ACNGT | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 3 cut(s) | 92, 160, 220 |
| Hsp92II | CATG | 2 cut(s) | 160, 277 |
| Kzo9I | GATC | 2 cut(s) | 270, 276 |
| LmnI | GCTCC | 1 cut(s) | 297 |
| LpnPI | CCDG | 7 cut(s) | 34, 48, 146, 171, 210, 230, 280 |
| MaeIII | GTNAC | 1 cut(s) | 209 |
| MalI | GATC | 2 cut(s) | 272, 278 |
| MboI | GATC | 2 cut(s) | 270, 276 |
| MboII | GAAGA | 2 cut(s) | 192, 271 |
| MlyI | GAGTC | 3 cut(s) | 26, 61, 154 |
| MnlI | CCTC | 2 cut(s) | 38, 270 |
| Mva1269I | GAATGC | 1 cut(s) | 296 |
| NdeII | GATC | 2 cut(s) | 270, 276 |
| NlaIII | CATG | 2 cut(s) | 160, 277 |
| NspI | RCATGY | 1 cut(s) | 160 |
| PaeR7I | CTCGAG | 1 cut(s) | 261 |
| PagI | TCATGA | 1 cut(s) | 273 |
| PctI | GAATGC | 1 cut(s) | 296 |
| PfeI | GAWTC | 2 cut(s) | 31, 252 |
| PleI | GAGTC | 3 cut(s) | 25, 60, 153 |
| PpsI | GAGTC | 3 cut(s) | 25, 60, 153 |
| PspXI | VCTCGAGB | 1 cut(s) | 261 |
| RsaI | GTAC | 1 cut(s) | 229 |
| RsaNI | GTAC | 1 cut(s) | 228 |
| Sau3AI | GATC | 2 cut(s) | 270, 276 |
| SchI | GAGTC | 3 cut(s) | 26, 61, 154 |
| SetI | ASST | 3 cut(s) | 72, 124, 302 |
| Sfr274I | CTCGAG | 1 cut(s) | 261 |
| SlaI | CTCGAG | 1 cut(s) | 261 |
| SmlI | CTYRAG | 1 cut(s) | 261 |
| SmoI | CTYRAG | 1 cut(s) | 261 |
| TaaI | ACNGT | 1 cut(s) | 181 |
| TaqI | TCGA | 1 cut(s) | 262 |
| TfiI | GAWTC | 2 cut(s) | 31, 252 |
| TspDTI | ATGAA | 2 cut(s) | 111, 123 |
| XceI | RCATGY | 1 cut(s) | 160 |
| XhoI | CTCGAG | 1 cut(s) | 261 |