Villin headpiece domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0071761 |
| rosa_multiflora | Rmu_sc0000694.1_g000024 Rmu_sc0002285.1_g000031 Rmu_sc0005500.1_g000002 Rmu_sc0013612.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00322960 Rroxscaffold_5G00335950 Rroxscaffold_5G00366950 Rroxscaffold_6G00388330 Rroxscaffold_6G00389350 Rroxscaffold_7G00165060 Rroxscaffold_7G00197390 |
| rosa_rugosa | Rorug01G0183100 Rorug01G0183200 Rorug03G0077400 Rorug05G0261600 Rorug05G0261700 |
| rosa_samantha | Rh2AG454500 Rh2BG458700 Rh2CG441600 Rh4CG103500 Rh4CG324600 Rh4DG275900 Rh4DG307600 Rh5CG264700 Rh6CG064500 Rh6CG148200 Rh6DG061500 Rh7CG217000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 42, 58 |
| AfaI | GTAC | 1 cut(s) | 30 |
| AgsI | TTSAA | 1 cut(s) | 344 |
| AluBI | AGCT | 2 cut(s) | 82, 277 |
| AluI | AGCT | 2 cut(s) | 82, 277 |
| AoxI | GGCC | 2 cut(s) | 24, 369 |
| AsuHPI | GGTGA | 1 cut(s) | 40 |
| BccI | CCATC | 1 cut(s) | 53 |
| BceAI | ACGGC | 1 cut(s) | 11 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 49, 83 |
| BsaBI | GATNNNNATC | 1 cut(s) | 141 |
| Bse8I | GATNNNNATC | 1 cut(s) | 141 |
| BseGI | GGATG | 1 cut(s) | 142 |
| BseJI | GATNNNNATC | 1 cut(s) | 141 |
| BseRI | GAGGAG | 1 cut(s) | 35 |
| Bsh1285I | CGRYCG | 1 cut(s) | 12 |
| BshFI | GGCC | 2 cut(s) | 26, 371 |
| BsiEI | CGRYCG | 1 cut(s) | 12 |
| BsiWI | CGTACG | 1 cut(s) | 28 |
| BslFI | GGGAC | 1 cut(s) | 361 |
| BsmFI | GGGAC | 1 cut(s) | 361 |
| BsmI | GAATGC | 1 cut(s) | 217 |
| BsnI | GGCC | 2 cut(s) | 26, 371 |
| BspACI | CCGC | 2 cut(s) | 42, 58 |
| BspANI | GGCC | 2 cut(s) | 26, 371 |
| BstC8I | GCNNGC | 1 cut(s) | 369 |
| BstF5I | GGATG | 1 cut(s) | 142 |
| BstMCI | CGRYCG | 1 cut(s) | 12 |
| BstNSI | RCATGY | 1 cut(s) | 367 |
| BsuRI | GGCC | 2 cut(s) | 26, 371 |
| BtsCI | GGATG | 1 cut(s) | 142 |
| Cac8I | GCNNGC | 1 cut(s) | 369 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviAII | CATG | 2 cut(s) | 156, 364 |
| CviJI | RGCY | 6 cut(s) | 26, 66, 82, 160, 277, 371 |
| CviKI_1 | RGCY | 6 cut(s) | 26, 66, 82, 160, 277, 371 |
| CviQI | GTAC | 1 cut(s) | 29 |
| EcoT22I | ATGCAT | 1 cut(s) | 157 |
| FaeI | CATG | 2 cut(s) | 159, 367 |
| FaiI | YATR | 9 cut(s) | 114, 118, 153, 157, 207, 209, 218, 312, 365 |
| FaqI | GGGAC | 1 cut(s) | 361 |
| FatI | CATG | 2 cut(s) | 155, 363 |
| FauNDI | CATATG | 1 cut(s) | 207 |
| FokI | GGATG | 1 cut(s) | 149 |
| HaeIII | GGCC | 2 cut(s) | 26, 371 |
| Hin1II | CATG | 2 cut(s) | 159, 367 |
| HincII | GTYRAC | 1 cut(s) | 263 |
| HindII | GTYRAC | 1 cut(s) | 263 |
| HindIII | AAGCTT | 2 cut(s) | 80, 275 |
| HinfI | GANTC | 5 cut(s) | 142, 224, 238, 259, 352 |
| HphI | GGTGA | 1 cut(s) | 40 |
| Hpy166II | GTNNAC | 1 cut(s) | 263 |
| Hpy8I | GTNNAC | 1 cut(s) | 263 |
| Hpy99I | CGWCG | 1 cut(s) | 36 |
| HpyCH4IV | ACGT | 1 cut(s) | 34 |
| HpyCH4V | TGCA | 3 cut(s) | 155, 299, 367 |
| HpySE526I | ACGT | 1 cut(s) | 34 |
| Hsp92II | CATG | 2 cut(s) | 159, 367 |
| LpnPI | CCDG | 2 cut(s) | 241, 353 |
| MaeII | ACGT | 1 cut(s) | 34 |
| MboII | GAAGA | 1 cut(s) | 194 |
| MlyI | GAGTC | 3 cut(s) | 233, 268, 361 |
| MnlI | CCTC | 5 cut(s) | 9, 13, 16, 77, 245 |
| Mph1103I | ATGCAT | 1 cut(s) | 157 |
| MslI | CAYNNNNRTG | 1 cut(s) | 210 |
| Mva1269I | GAATGC | 1 cut(s) | 217 |
| NdeI | CATATG | 1 cut(s) | 207 |
| NlaIII | CATG | 2 cut(s) | 159, 367 |
| NsiI | ATGCAT | 1 cut(s) | 157 |
| NspI | RCATGY | 1 cut(s) | 367 |
| PctI | GAATGC | 1 cut(s) | 217 |
| PfeI | GAWTC | 2 cut(s) | 142, 238 |
| Pfl23II | CGTACG | 1 cut(s) | 28 |
| PleI | GAGTC | 3 cut(s) | 232, 267, 360 |
| PpsI | GAGTC | 3 cut(s) | 232, 267, 360 |
| PspLI | CGTACG | 1 cut(s) | 28 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| RseI | CAYNNNNRTG | 1 cut(s) | 210 |
| SchI | GAGTC | 3 cut(s) | 233, 268, 361 |
| SetI | ASST | 3 cut(s) | 37, 84, 279 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 210 |
| SsiI | CCGC | 2 cut(s) | 42, 58 |
| TaiI | ACGT | 1 cut(s) | 37 |
| TaqI | TCGA | 1 cut(s) | 69 |
| TaqII | GACCGA | 1 cut(s) | 26 |
| TfiI | GAWTC | 2 cut(s) | 142, 238 |
| TspDTI | ATGAA | 3 cut(s) | 224, 318, 330 |
| XceI | RCATGY | 1 cut(s) | 367 |
| Zsp2I | ATGCAT | 1 cut(s) | 157 |