Villin headpiece domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0071761 |
| rosa_multiflora | Rmu_sc0000694.1_g000024 Rmu_sc0002285.1_g000031 Rmu_sc0005500.1_g000002 Rmu_sc0013612.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00322960 Rroxscaffold_5G00335950 Rroxscaffold_5G00366950 Rroxscaffold_6G00388330 Rroxscaffold_6G00389350 Rroxscaffold_7G00165060 Rroxscaffold_7G00197390 |
| rosa_rugosa | Rorug01G0183100 Rorug01G0183200 Rorug03G0077400 Rorug05G0261600 Rorug05G0261700 |
| rosa_samantha | Rh2AG454500 Rh2BG458700 Rh2CG441600 Rh4CG103500 Rh4CG324600 Rh4DG275900 Rh4DG307600 Rh5CG264700 Rh6CG064500 Rh6CG148200 Rh6DG061500 Rh7CG217000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 341 |
| AluBI | AGCT | 2 cut(s) | 79, 274 |
| AluI | AGCT | 2 cut(s) | 79, 274 |
| AoxI | GGCC | 1 cut(s) | 366 |
| AsuHPI | GGTGA | 1 cut(s) | 50 |
| BanII | GRGCYC | 1 cut(s) | 10 |
| BccI | CCATC | 1 cut(s) | 29 |
| BsaBI | GATNNNNATC | 1 cut(s) | 138 |
| BsaJI | CCNNGG | 1 cut(s) | 63 |
| Bse8I | GATNNNNATC | 1 cut(s) | 138 |
| BseDI | CCNNGG | 1 cut(s) | 63 |
| BseGI | GGATG | 1 cut(s) | 139 |
| BseJI | GATNNNNATC | 1 cut(s) | 138 |
| BshFI | GGCC | 1 cut(s) | 368 |
| BslFI | GGGAC | 2 cut(s) | 34, 358 |
| BsmFI | GGGAC | 2 cut(s) | 34, 358 |
| BsmI | GAATGC | 1 cut(s) | 214 |
| BsnI | GGCC | 1 cut(s) | 368 |
| Bsp1286I | GDGCHC | 1 cut(s) | 10 |
| BspANI | GGCC | 1 cut(s) | 368 |
| BspQI | GCTCTTC | 1 cut(s) | 15 |
| BssECI | CCNNGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 1 cut(s) | 48 |
| Bst6I | CTCTTC | 1 cut(s) | 15 |
| BstC8I | GCNNGC | 1 cut(s) | 366 |
| BstF5I | GGATG | 1 cut(s) | 139 |
| BstNSI | RCATGY | 1 cut(s) | 364 |
| BsuRI | GGCC | 1 cut(s) | 368 |
| BtsCI | GGATG | 1 cut(s) | 139 |
| Cac8I | GCNNGC | 1 cut(s) | 366 |
| CviAII | CATG | 2 cut(s) | 153, 361 |
| CviJI | RGCY | 6 cut(s) | 8, 62, 79, 157, 274, 368 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 62, 79, 157, 274, 368 |
| Eam1104I | CTCTTC | 1 cut(s) | 15 |
| EarI | CTCTTC | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 1 cut(s) | 10 |
| EcoT22I | ATGCAT | 1 cut(s) | 154 |
| EcoT38I | GRGCYC | 1 cut(s) | 10 |
| FaeI | CATG | 2 cut(s) | 156, 364 |
| FaiI | YATR | 9 cut(s) | 111, 115, 150, 154, 204, 206, 215, 309, 362 |
| FaqI | GGGAC | 2 cut(s) | 34, 358 |
| FatI | CATG | 2 cut(s) | 152, 360 |
| FauNDI | CATATG | 1 cut(s) | 204 |
| FokI | GGATG | 1 cut(s) | 146 |
| FriOI | GRGCYC | 1 cut(s) | 10 |
| HaeIII | GGCC | 1 cut(s) | 368 |
| Hin1II | CATG | 2 cut(s) | 156, 364 |
| HincII | GTYRAC | 1 cut(s) | 260 |
| HindII | GTYRAC | 1 cut(s) | 260 |
| HindIII | AAGCTT | 2 cut(s) | 77, 272 |
| HinfI | GANTC | 5 cut(s) | 139, 221, 235, 256, 349 |
| HphI | GGTGA | 1 cut(s) | 50 |
| Hpy166II | GTNNAC | 1 cut(s) | 260 |
| Hpy188I | TCNGA | 1 cut(s) | 67 |
| Hpy8I | GTNNAC | 1 cut(s) | 260 |
| HpyCH4III | ACNGT | 1 cut(s) | 48 |
| HpyCH4V | TGCA | 3 cut(s) | 152, 296, 364 |
| Hsp92II | CATG | 2 cut(s) | 156, 364 |
| LguI | GCTCTTC | 1 cut(s) | 15 |
| LpnPI | CCDG | 2 cut(s) | 72, 350 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MhlI | GDGCHC | 1 cut(s) | 10 |
| MlyI | GAGTC | 3 cut(s) | 230, 265, 358 |
| MnlI | CCTC | 3 cut(s) | 13, 73, 242 |
| Mph1103I | ATGCAT | 1 cut(s) | 154 |
| MslI | CAYNNNNRTG | 1 cut(s) | 207 |
| Mva1269I | GAATGC | 1 cut(s) | 214 |
| NdeI | CATATG | 1 cut(s) | 204 |
| NlaIII | CATG | 2 cut(s) | 156, 364 |
| NsiI | ATGCAT | 1 cut(s) | 154 |
| NspI | RCATGY | 1 cut(s) | 364 |
| PciSI | GCTCTTC | 1 cut(s) | 15 |
| PctI | GAATGC | 1 cut(s) | 214 |
| PfeI | GAWTC | 2 cut(s) | 139, 235 |
| PleI | GAGTC | 3 cut(s) | 229, 264, 357 |
| PpsI | GAGTC | 3 cut(s) | 229, 264, 357 |
| RseI | CAYNNNNRTG | 1 cut(s) | 207 |
| SapI | GCTCTTC | 1 cut(s) | 15 |
| SchI | GAGTC | 3 cut(s) | 230, 265, 358 |
| SduI | GDGCHC | 1 cut(s) | 10 |
| SetI | ASST | 4 cut(s) | 24, 81, 253, 276 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 207 |
| TaaI | ACNGT | 1 cut(s) | 48 |
| TfiI | GAWTC | 2 cut(s) | 139, 235 |
| TspDTI | ATGAA | 3 cut(s) | 221, 315, 327 |
| XceI | RCATGY | 1 cut(s) | 364 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 21 |
| Zsp2I | ATGCAT | 1 cut(s) | 154 |