Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005563

Physical Location & Seq

Genomic Coordinates Forward (+)

29588494 .. 29592191

Gene Structure 3698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0261700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGACTACGGTTAAGTCAGTGAGCTATTCCATTCTGATTAATGGTACTCCTACAGGTTTTATCTTGCCTTCTAGTGGTATTCGACAGGGAGATCCTCTCTCCCCATATCTTTTTATTCTATGTGCTGAGGGTCTCTCTGCATTAATCTCTTCGTCAGTTCATCAGGGATTGGTCAAGGGTCTGAAAATGTCTCCCACGGCACCTACTATTCATCATCTCCTATTTGCGGATGATAGCTTTCTATTTGGAGAAGCTTCAGTGGGGGAATGCCTAGCCTTCAAGCACATCTTAGCCGTGTACGCCAAAGCTTCCGGTCAGCATATCAATTTACAGAAATCAAGTGTGGTCTTTAGTGGTAATGTTAGCCTTCAGACGAGGAATCAACTAGCTGCAATCTTGGGTGTGACATGTGTTAAAGAGAATGGCTTGTACTTGGGGCTTCCTATACATGTAGGGCATAACAAGACGGCCATCTTTGCCTATCTGAAAGAACGCCTCACAAAAAAGCTCATTAGCTGGCGTGCTAAGATTCTCAGCGTTGGCGGTAAGGAATTACTTATCAAAGTTGTTGCTCAAACCTTGCCAACTTATGTGATGAACTGTTATGCCCTACCTAAGTCTCTCTGTGATGATCTCCAGCAACTTTGTTGCCAATTTTTTTGGGGTAGTATTGATGATAAGCGTAAAATCCATTGGCACTCTTGGGAGCGAATGTGTCTTCCTAAAGAACAGGGAGGTATGGGGTTCAAGCATTTATACGCTCATAATCTTGCCATGCTAGCTAAGCAAGGATGGCGTCTTCTTACACATCCTAGTTCTCTTGTGGCTCAAGTCTTCAAAGCCGTTTATTATCCGCATGGAACTTTTCTTACGGCAGACATGGGGGAGAGGCCATCTTACTCTTGGAGGAGTATTATGGAGGCTAGGGCGGTCTTGCAGGCTGGTTTATCTTGGAGAATCGGCAATGGTAGTTCTGTGGGCATTTGGGATTCCGATTGGATTCCTTTTGTTTCTGTTCACACTCTCACTCGGCCTCCGGATACAGTTTTTGAGCGGGTTGCAGATCTCATTAATGCGGACACCTGGTCGTGGGATGAAGCTGTTGTTCATTTATGTTTTGATCCTCACGTGGCTACTCGGGTTTTGTCTATTCCACTTAGTAGACGCCATGGTCAGGATAGAGCGTCTTGGAAATTGGATAAGCGAGGTTTCTTCTCGGTGAAGTCTGCTTATGTTATAGCTCGTGAGTTTATCATGGGTCATCATTTTGCTTCCTCTTCCGTTGGTGATCCATGTGGACCAGTGTGGAGGGCCTTATGGATGGCCAAAGTCCCCCGTAAGGTCGCCATATTTGGGTGGCGAGCTGTTCAGAATCTCCTCCCTACTCGTGCTGCCCTAGCTACCAAGGGTTTCTCCGGTGATCTTCAGTGCGTCATTTGCTCCGATGAGGTTGAAACGGTGGAACATTTGTTTTGTCAGTGTCATTTATCCACTGGAATTTTAGGTGCTGCCCCTTTTTATATTCAGCCTTCTTCTTTGACCTGGAAGGATTGGTTTCTGGAGAGAGCTACTACCACTACTAGAATAATCACCCAACTGCTCTCTGCCTCAGCCTCTGCCTCCACTCTCCTCCGCCTCCGCTATCCTCCTCCTCCTCTTCCTTTTGGCACACCTGTTCTCTCATCTCTCTTCTCCAATTCACCAGATCTGCTAAAGACGCAGTCCACGCCGGAGCTCCGCCTTGCCCCTCCTCCTTCTCTTTTCTCCTTCCACCCCGACGTGTATCGGGCTCGTGGTCAACTGATCTTGCTCTTGGAAACTTGGTTCGATTCAGAAATTTTCAAGCTCGGATACAAGAGTATGTTGAAACTACAAGCTTCTGTCAATTCTGGAGCTGAGTGCTTTGATAAGTTGTTGGTGCTGATGTGGAGTATCCGGAGGAATAGGAATGAGAAGTTGTGGAGGGATCGATCTCAAACAAGGCTGGGCCTTGTGGCCGGTGCTATGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010639 GO:0015629 GO:0016043 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

670

Amino Acids

74.63

Weight (kDa)

9.41

Isoelectric Point (pI)

37.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	13 - 147	1.4e-08	Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT	PF13966	405 - 498	3e-16	zinc-binding in reverse transcriptase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005563)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0071761
rosa_multiflora	Rmu_sc0000694.1_g000024 Rmu_sc0002285.1_g000031 Rmu_sc0005500.1_g000002 Rmu_sc0013612.1_g000018
rosa_roxburghii	Rroxscaffold_4G00322960 Rroxscaffold_5G00335950 Rroxscaffold_5G00366950 Rroxscaffold_6G00388330 Rroxscaffold_6G00389350 Rroxscaffold_7G00165060 Rroxscaffold_7G00197390
rosa_rugosa	Rorug01G0183100 Rorug01G0183200 Rorug03G0077400 Rorug05G0261600 Rorug05G0261700
rosa_samantha	Rh2AG454500 Rh2BG458700 Rh2CG441600 Rh4CG103500 Rh4CG324600 Rh4DG275900 Rh4DG307600 Rh5CG264700 Rh6CG064500 Rh6CG148200 Rh6DG061500 Rh7CG217000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1170
AccB1I	GGYRCC	1 cut(s)	199
AccBSI	CCGCTC	1 cut(s)	1054
AccI	GTMKAC	1 cut(s)	1162
AccIII	TCCGGA	2 cut(s)	1036, 1935
AciI	CCGC	9 cut(s)	227, 543, 854, 929, 1054, 1076, 1633, 1639, 1738
AclWI	GGATC	4 cut(s)	86, 1115, 1283, 1974
AcoI	YGGCCR	3 cut(s)	468, 1323, 1995
AcsI	RAATTY	2 cut(s)	1497, 1836
AcuI	CTGAAG	3 cut(s)	240, 353, 1409
AcvI	CACGTG	1 cut(s)	1129
AcyI	GRCGYC	2 cut(s)	796, 1165
AfaI	GTAC	3 cut(s)	46, 299, 431
AfiI	CCNNNNNNNGG	6 cut(s)	74, 226, 1089, 1174, 1339, 1353
AflIII	ACRYGT	3 cut(s)	407, 448, 1779
AgsI	TTSAA	6 cut(s)	280, 748, 838, 1454, 1843, 1867
AhdI	GACNNNNNGTC	1 cut(s)	1084
AjiI	CACGTC	1 cut(s)	1780
AjnI	CCWGG	2 cut(s)	1082, 1541
AloI	GAACNNNNNNTCC	2 cut(s)	1808, 1840
Alw21I	GWGCWC	1 cut(s)	1737
Alw26I	GTCTC	3 cut(s)	137, 195, 624
AlwI	GGATC	4 cut(s)	86, 1115, 1283, 1974
AlwNI	CAGNNNCTG	1 cut(s)	1616
Ama87I	CYCGRG	1 cut(s)	1137
Aor13HI	TCCGGA	2 cut(s)	1036, 1935
AoxI	GGCC	8 cut(s)	468, 890, 1031, 1311, 1323, 1987, 1995, 2007
ApeKI	GCWGC	3 cut(s)	389, 1391, 1508
ApoI	RAATTY	2 cut(s)	1497, 1836
AseI	ATTAAT	3 cut(s)	39, 143, 1071
AspS9I	GGNCC	3 cut(s)	1298, 1311, 1987
AsuHPI	GGTGA	5 cut(s)	1231, 1298, 1430, 1582, 1692
AsuNHI	GCTAGC	1 cut(s)	778
AvaI	CYCGRG	1 cut(s)	1137
AvaII	GGWCC	1 cut(s)	1298
BaeI	ACNNNNGTAYC	2 cut(s)	1843, 1876
BalI	TGGCCA	1 cut(s)	1325
BanI	GGYRCC	1 cut(s)	199
BanII	GRGCYC	2 cut(s)	1737, 1792
BauI	CACGAG	3 cut(s)	1242, 1386, 1791
BbrPI	CACGTG	1 cut(s)	1129
BbsI	GAAGAC	3 cut(s)	710, 791, 826
Bbv12I	GWGCWC	1 cut(s)	1737
BbvCI	CCTCAGC	2 cut(s)	126, 1609
BbvI	GCAGC	3 cut(s)	376, 1378, 1495
BccI	CCATC	4 cut(s)	479, 786, 901, 1315
BceAI	ACGGC	5 cut(s)	213, 278, 483, 827, 888
BciT130I	CCWGG	2 cut(s)	1084, 1543
BciVI	GTATCC	3 cut(s)	1033, 1844, 1943
BcoDI	GTCTC	3 cut(s)	137, 195, 624
BfaI	CTAG	8 cut(s)	72, 272, 386, 779, 813, 924, 1397, 1581
BfmI	CTRYAG	1 cut(s)	51
BfuI	GTATCC	3 cut(s)	1033, 1844, 1943
BglII	AGATCT	2 cut(s)	1063, 1705
BisI	GCNGC	3 cut(s)	390, 1392, 1509
BlpI	GCTNAGC	1 cut(s)	783
BlsI	GCNGC	3 cut(s)	391, 1393, 1510
Bme1390I	CCNGG	2 cut(s)	1084, 1543
Bme18I	GGWCC	1 cut(s)	1298
BmeRI	GACNNNNNGTC	1 cut(s)	1084
BmeT110I	CYCGRG	1 cut(s)	1137
BmgBI	CACGTC	1 cut(s)	1780
BmgT120I	GGNCC	3 cut(s)	1298, 1311, 1987
BmiI	GGNNCC	1 cut(s)	201
BmrFI	CCNGG	2 cut(s)	1084, 1543
BmtI	GCTAGC	1 cut(s)	782
BpiI	GAAGAC	3 cut(s)	710, 791, 826
BplI	GAGNNNNNCTC	4 cut(s)	81, 113, 119, 151
BpmI	CTGGAG	3 cut(s)	620, 1580, 1911
Bpu10I	CCTNAGC	2 cut(s)	126, 1609
Bpu1102I	GCTNAGC	1 cut(s)	783
BpuEI	CTTGAG	1 cut(s)	813
Bsa29I	ATCGAT	1 cut(s)	1969
BsaAI	YACGTR	1 cut(s)	1129
BsaHI	GRCGYC	2 cut(s)	796, 1165
BsaI	GGTCTC	1 cut(s)	137
BsaJI	CCNNGG	3 cut(s)	195, 1168, 1404
BsaWI	WCCGGW	4 cut(s)	311, 1036, 1415, 1935
BsaXI	ACNNNNNCTCC	4 cut(s)	698, 728, 1018, 1048
Bsc4I	CCNNNNNNNGG	6 cut(s)	74, 226, 1089, 1174, 1339, 1353
Bse118I	RCCGGY	1 cut(s)	1997
Bse1I	ACTGG	2 cut(s)	1301, 1498
Bse3DI	GCAATG	1 cut(s)	970
BseAI	TCCGGA	2 cut(s)	1036, 1935
BseBI	CCWGG	2 cut(s)	1084, 1543
BseCI	ATCGAT	1 cut(s)	1969
BseDI	CCNNGG	3 cut(s)	195, 1168, 1404
BseGI	GGATG	5 cut(s)	235, 797, 808, 1099, 1326
BseLI	CCNNNNNNNGG	6 cut(s)	74, 226, 1089, 1174, 1339, 1353
BseMI	GCAATG	1 cut(s)	970
BseMII	CTCAG	4 cut(s)	117, 547, 1623, 1887
BseNI	ACTGG	2 cut(s)	1301, 1498
BseRI	GAGGAG	7 cut(s)	922, 1367, 1619, 1638, 1641, 1644, 1740
BseXI	GCAGC	3 cut(s)	376, 1378, 1495
BseYI	CCCAGC	1 cut(s)	1984
BshFI	GGCC	8 cut(s)	470, 892, 1033, 1313, 1325, 1989, 1997, 2009
BshNI	GGYRCC	1 cut(s)	199
BshVI	ATCGAT	1 cut(s)	1969
BsiHKAI	GWGCWC	1 cut(s)	1737
BsiHKCI	CYCGRG	1 cut(s)	1137
BsiSI	CCGG	6 cut(s)	312, 1037, 1416, 1730, 1936, 1998
BslFI	GGGAC	1 cut(s)	1316
BslI	CCNNNNNNNGG	6 cut(s)	74, 226, 1089, 1174, 1339, 1353
BsmAI	GTCTC	3 cut(s)	137, 195, 624
BsmFI	GGGAC	1 cut(s)	1316
BsmI	GAATGC	1 cut(s)	272
BsnI	GGCC	8 cut(s)	470, 892, 1033, 1313, 1325, 1989, 1997, 2009
Bso31I	GGTCTC	1 cut(s)	137
BsoBI	CYCGRG	1 cut(s)	1137
Bsp1286I	GDGCHC	2 cut(s)	1737, 1792
Bsp13I	TCCGGA	2 cut(s)	1036, 1935
Bsp1720I	GCTNAGC	1 cut(s)	783
Bsp19I	CCATGG	1 cut(s)	1168
BspACI	CCGC	9 cut(s)	227, 543, 854, 929, 1054, 1076, 1633, 1639, 1738
BspANI	GGCC	8 cut(s)	470, 892, 1033, 1313, 1325, 1989, 1997, 2009
BspCNI	CTCAG	4 cut(s)	118, 546, 1622, 1888
BspDI	ATCGAT	1 cut(s)	1969
BspEI	TCCGGA	2 cut(s)	1036, 1935
BspLI	GGNNCC	1 cut(s)	201
BspOI	GCTAGC	1 cut(s)	782
BspPI	GGATC	4 cut(s)	86, 1115, 1283, 1974
BspT107I	GGYRCC	1 cut(s)	199
BspTNI	GGTCTC	1 cut(s)	137
BsrBI	CCGCTC	1 cut(s)	1054
BsrDI	GCAATG	1 cut(s)	970
BsrFI	RCCGGY	1 cut(s)	1997
BsrI	ACTGG	2 cut(s)	1301, 1498
BssAI	RCCGGY	1 cut(s)	1997
BssECI	CCNNGG	3 cut(s)	195, 1168, 1404
BssNI	GRCGYC	2 cut(s)	796, 1165
BssSI	CACGAG	3 cut(s)	1242, 1386, 1791
BssT1I	CCWWGG	2 cut(s)	1168, 1404
Bst2BI	CACGAG	3 cut(s)	1242, 1386, 1791
Bst2UI	CCWGG	2 cut(s)	1084, 1543
Bst4CI	ACNGT	4 cut(s)	10, 602, 1045, 1459
Bst6I	CTCTTC	4 cut(s)	154, 1282, 1662, 1694
BstACI	GRCGYC	2 cut(s)	796, 1165
BstBAI	YACGTR	1 cut(s)	1129
BstC8I	GCNNGC	5 cut(s)	518, 522, 780, 939, 1362
BstDEI	CTNAG	9 cut(s)	126, 289, 525, 533, 615, 783, 1157, 1609, 1896
BstDSI	CCRYGG	2 cut(s)	195, 1168
BstF5I	GGATG	5 cut(s)	235, 797, 808, 1099, 1326
BstMAI	GTCTC	3 cut(s)	137, 195, 624
BstMWI	GCNNNNNNNGC	9 cut(s)	299, 476, 779, 784, 793, 1397, 1437, 1717, 1726
BstNI	CCWGG	2 cut(s)	1084, 1543
BstNSI	RCATGY	2 cut(s)	411, 452
BstSCI	CCNGG	2 cut(s)	1082, 1541
BstSFI	CTRYAG	1 cut(s)	51
BstV1I	GCAGC	3 cut(s)	376, 1378, 1495
BstV2I	GAAGAC	3 cut(s)	710, 791, 826
BstX2I	RGATCY	3 cut(s)	91, 1063, 1705
BstYI	RGATCY	3 cut(s)	91, 1063, 1705
Bsu15I	ATCGAT	1 cut(s)	1969
BsuI	GTATCC	3 cut(s)	1033, 1844, 1943
BsuRI	GGCC	8 cut(s)	470, 892, 1033, 1313, 1325, 1989, 1997, 2009
BsuTUI	ATCGAT	1 cut(s)	1969
BtgI	CCRYGG	2 cut(s)	195, 1168
BtrI	CACGTC	1 cut(s)	1780
BtsCI	GGATG	5 cut(s)	235, 797, 808, 1099, 1326
BtsIMutI	CAGTG	6 cut(s)	24, 264, 1308, 1433, 1484, 1491
Cac8I	GCNNGC	5 cut(s)	518, 522, 780, 939, 1362
CaiI	CAGNNNCTG	1 cut(s)	1616
Cfr10I	RCCGGY	1 cut(s)	1997
Cfr13I	GGNCC	3 cut(s)	1298, 1311, 1987
ClaI	ATCGAT	1 cut(s)	1969
CseI	GACGC	5 cut(s)	785, 1173, 1173, 1420, 1726
CsiI	ACCWGGT	1 cut(s)	1082
Csp6I	GTAC	3 cut(s)	45, 298, 430
CviAII	CATG	8 cut(s)	408, 449, 775, 857, 880, 1169, 1255, 1293
CviQI	GTAC	3 cut(s)	45, 298, 430
DdeI	CTNAG	9 cut(s)	126, 289, 525, 533, 615, 783, 1157, 1609, 1896
DrdI	GACNNNNNNGTC	1 cut(s)	1170
DriI	GACNNNNNGTC	1 cut(s)	1084
DseDI	GACNNNNNNGTC	1 cut(s)	1170
EaeI	YGGCCR	3 cut(s)	468, 1323, 1995
Eam1104I	CTCTTC	4 cut(s)	154, 1282, 1662, 1694
Eam1105I	GACNNNNNGTC	1 cut(s)	1084
EarI	CTCTTC	4 cut(s)	154, 1282, 1662, 1694
EciI	GGCGGA	2 cut(s)	1622, 1727
Ecl136II	GAGCTC	1 cut(s)	1735
Eco130I	CCWWGG	2 cut(s)	1168, 1404
Eco24I	GRGCYC	2 cut(s)	1737, 1792
Eco31I	GGTCTC	1 cut(s)	137
Eco47I	GGWCC	1 cut(s)	1298
Eco53kI	GAGCTC	1 cut(s)	1735
Eco57I	CTGAAG	3 cut(s)	240, 353, 1409
Eco72I	CACGTG	1 cut(s)	1129
Eco88I	CYCGRG	1 cut(s)	1137
EcoICRI	GAGCTC	1 cut(s)	1735
EcoO109I	RGGNCCY	1 cut(s)	1311
EcoRII	CCWGG	2 cut(s)	1082, 1541
EcoT14I	CCWWGG	2 cut(s)	1168, 1404
EcoT38I	GRGCYC	2 cut(s)	1737, 1792
ErhI	CCWWGG	2 cut(s)	1168, 1404
FaeI	CATG	8 cut(s)	411, 452, 778, 860, 883, 1172, 1258, 1296
FalI	AAGNNNNNCTT	2 cut(s)	272, 304
FaqI	GGGAC	1 cut(s)	1316
FatI	CATG	8 cut(s)	407, 448, 774, 856, 879, 1168, 1254, 1292
FauI	CCCGC	1 cut(s)	1047
FblI	GTMKAC	1 cut(s)	1162
Fnu4HI	GCNGC	3 cut(s)	390, 1392, 1509
FokI	GGATG	5 cut(s)	242, 795, 804, 1106, 1333
FriOI	GRGCYC	2 cut(s)	1737, 1792
Fsp4HI	GCNGC	3 cut(s)	390, 1392, 1509
FspBI	CTAG	8 cut(s)	72, 272, 386, 779, 813, 924, 1397, 1581
GluI	GCNGC	3 cut(s)	390, 1392, 1509
GsaI	CCCAGC	1 cut(s)	1988
GsuI	CTGGAG	3 cut(s)	620, 1580, 1911
HaeIII	GGCC	8 cut(s)	470, 892, 1033, 1313, 1325, 1989, 1997, 2009
HapII	CCGG	6 cut(s)	312, 1037, 1416, 1730, 1936, 1998
HgaI	GACGC	5 cut(s)	785, 1173, 1173, 1420, 1726
Hin1I	GRCGYC	2 cut(s)	796, 1165
Hin1II	CATG	8 cut(s)	411, 452, 778, 860, 883, 1172, 1258, 1296
HincII	GTYRAC	1 cut(s)	1799
HindII	GTYRAC	1 cut(s)	1799
HindIII	AAGCTT	3 cut(s)	252, 306, 1875
HinfI	GANTC	7 cut(s)	379, 529, 957, 989, 1000, 1372, 1829
HpaII	CCGG	6 cut(s)	312, 1037, 1416, 1730, 1936, 1998
HphI	GGTGA	5 cut(s)	1231, 1298, 1430, 1582, 1692
Hpy166II	GTNNAC	6 cut(s)	298, 1018, 1163, 1298, 1725, 1799
Hpy188I	TCNGA	9 cut(s)	36, 183, 372, 486, 994, 1371, 1444, 1834, 1850
Hpy188III	TCNNGA	6 cut(s)	1037, 1175, 1244, 1559, 1890, 1936
Hpy8I	GTNNAC	6 cut(s)	298, 1018, 1163, 1298, 1725, 1799
Hpy99I	CGWCG	1 cut(s)	1781
HpyAV	CCTTC	7 cut(s)	78, 286, 377, 1539, 1540, 1764, 1777
HpyCH4III	ACNGT	4 cut(s)	10, 602, 1045, 1459
HpyCH4IV	ACGT	2 cut(s)	1128, 1779
HpyCH4V	TGCA	4 cut(s)	140, 392, 937, 1061
HpyF10VI	GCNNNNNNNGC	9 cut(s)	299, 476, 779, 784, 793, 1397, 1437, 1717, 1726
HpyF3I	CTNAG	9 cut(s)	126, 289, 525, 533, 615, 783, 1157, 1609, 1896
HpySE526I	ACGT	2 cut(s)	1128, 1779
Hsp92I	GRCGYC	2 cut(s)	796, 1165
Hsp92II	CATG	8 cut(s)	411, 452, 778, 860, 883, 1172, 1258, 1296
Kpn2I	TCCGGA	2 cut(s)	1036, 1935
LmnI	GCTCC	5 cut(s)	706, 1445, 1732, 1740, 1892
Lsp1109I	GCAGC	3 cut(s)	376, 1378, 1495
MabI	ACCWGGT	1 cut(s)	1082
MaeI	CTAG	8 cut(s)	72, 272, 386, 779, 813, 924, 1397, 1581
MaeII	ACGT	2 cut(s)	1128, 1779
MaeIII	GTNAC	1 cut(s)	403
MbiI	CCGCTC	1 cut(s)	1054
MflI	RGATCY	3 cut(s)	91, 1063, 1705
MhlI	GDGCHC	2 cut(s)	1737, 1792
MlsI	TGGCCA	1 cut(s)	1325
MluCI	AATT	8 cut(s)	325, 551, 653, 1193, 1497, 1696, 1836, 1885
MluNI	TGGCCA	1 cut(s)	1325
Mox20I	TGGCCA	1 cut(s)	1325
MroI	TCCGGA	2 cut(s)	1036, 1935
MscI	TGGCCA	1 cut(s)	1325
MseI	TTAA	5 cut(s)	12, 39, 143, 414, 1071
Msp20I	TGGCCA	1 cut(s)	1325
MspI	CCGG	6 cut(s)	312, 1037, 1416, 1730, 1936, 1998
MspR9I	CCNGG	2 cut(s)	1084, 1543
Mva1269I	GAATGC	1 cut(s)	272
MvaI	CCWGG	2 cut(s)	1084, 1543
MwoI	GCNNNNNNNGC	9 cut(s)	299, 476, 779, 784, 793, 1397, 1437, 1717, 1726
NcoI	CCATGG	1 cut(s)	1168
NheI	GCTAGC	1 cut(s)	778
NlaIII	CATG	8 cut(s)	411, 452, 778, 860, 883, 1172, 1258, 1296
NlaIV	GGNNCC	1 cut(s)	201
NmeAIII	GCCGAG	1 cut(s)	1009
NmuCI	GTSAC	1 cut(s)	403
NspI	RCATGY	2 cut(s)	411, 452
PciI	ACATGT	2 cut(s)	407, 448
PctI	GAATGC	1 cut(s)	272
PfeI	GAWTC	7 cut(s)	379, 529, 957, 989, 1000, 1372, 1829
PflFI	GACNNNGTC	1 cut(s)	1720
PkrI	GCNGC	3 cut(s)	391, 1393, 1510
PmaCI	CACGTG	1 cut(s)	1129
PmlI	CACGTG	1 cut(s)	1129
Ppu21I	YACGTR	1 cut(s)	1129
PscI	ACATGT	2 cut(s)	407, 448
PshBI	ATTAAT	3 cut(s)	39, 143, 1071
Psp124BI	GAGCTC	1 cut(s)	1737
Psp6I	CCWGG	2 cut(s)	1082, 1541
PspCI	CACGTG	1 cut(s)	1129
PspFI	CCCAGC	1 cut(s)	1984
PspGI	CCWGG	2 cut(s)	1082, 1541
PspN4I	GGNNCC	1 cut(s)	201
PspPI	GGNCC	3 cut(s)	1298, 1311, 1987
PsrI	GAACNNNNNNTAC	2 cut(s)	853, 885
PstNI	CAGNNNCTG	1 cut(s)	1616
PsuI	RGATCY	3 cut(s)	91, 1063, 1705
PsyI	GACNNNGTC	1 cut(s)	1720
RsaI	GTAC	3 cut(s)	46, 299, 431
RsaNI	GTAC	3 cut(s)	45, 298, 430
SacI	GAGCTC	1 cut(s)	1737
SaqAI	TTAA	5 cut(s)	12, 39, 143, 414, 1071
SatI	GCNGC	3 cut(s)	390, 1392, 1509
Sau96I	GGNCC	3 cut(s)	1298, 1311, 1987
ScrFI	CCNGG	2 cut(s)	1084, 1543
SduI	GDGCHC	2 cut(s)	1737, 1792
SexAI	ACCWGGT	1 cut(s)	1082
SfcI	CTRYAG	1 cut(s)	51
SinI	GGWCC	1 cut(s)	1298
SmlI	CTYRAG	1 cut(s)	828
SmoI	CTYRAG	1 cut(s)	828
Sse9I	AATT	8 cut(s)	325, 551, 653, 1193, 1497, 1696, 1836, 1885
SsiI	CCGC	9 cut(s)	227, 543, 854, 929, 1054, 1076, 1633, 1639, 1738
SspMI	CTAG	8 cut(s)	72, 272, 386, 779, 813, 924, 1397, 1581
SstI	GAGCTC	1 cut(s)	1737
StyD4I	CCNGG	2 cut(s)	1082, 1541
StyI	CCWWGG	2 cut(s)	1168, 1404
TaaI	ACNGT	4 cut(s)	10, 602, 1045, 1459
TaiI	ACGT	2 cut(s)	1131, 1782
TaqI	TCGA	3 cut(s)	82, 1827, 1969
TasI	AATT	8 cut(s)	325, 551, 653, 1193, 1497, 1696, 1836, 1885
TatI	WGTACW	1 cut(s)	429
TfiI	GAWTC	7 cut(s)	379, 529, 957, 989, 1000, 1372, 1829
Tru1I	TTAA	5 cut(s)	12, 39, 143, 414, 1071
Tru9I	TTAA	5 cut(s)	12, 39, 143, 414, 1071
TscAI	CASTG	6 cut(s)	24, 264, 1308, 1433, 1484, 1498
TseFI	GTSAC	1 cut(s)	403
TseI	GCWGC	3 cut(s)	389, 1391, 1508
Tsp45I	GTSAC	1 cut(s)	403
TspDTI	ATGAA	5 cut(s)	149, 200, 611, 1097, 1110
TspGWI	ACGGA	1 cut(s)	1270
TspRI	CASTG	6 cut(s)	24, 264, 1308, 1433, 1484, 1498
Tth111I	GACNNNGTC	1 cut(s)	1720
VpaK11BI	GGWCC	1 cut(s)	1298
VspI	ATTAAT	3 cut(s)	39, 143, 1071
XapI	RAATTY	2 cut(s)	1497, 1836
XceI	RCATGY	2 cut(s)	411, 452
XcmI	CCANNNNNNNNNTGG	1 cut(s)	900
XmiI	GTMKAC	1 cut(s)	1162
XspI	CTAG	8 cut(s)	72, 272, 386, 779, 813, 924, 1397, 1581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.