Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002831.1

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Forward (+)

124818 .. 127262

Gene Structure 2445 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

atggcttccatcggcattgctatccttctcttctcactatattctctatgtggaggagctcaacaaaacaacaattctagccacatacccctgggatcttcactctctccagaaactcaccccagctcatggccttctgcctctggccggttcgaattcggcttttatcagcaaggaagtggtttcgcggttggaatttggttggtgggagtagacggaaacacaactgtatggacagcaaaccgtgatggtcccccactgctgccctcaccaaataatatagtgcaggtgcagttagccaatgatggcaagcttgttctaaccagtgaccaaggtcataaaaaagtagtcatcgcaaatgcaacgcacggttctgtttcctctgcctccatgcttgattctggaaacttcgttctttacgacgaaaactatgaagtgatctgggagagtttcaatcatcctactgatactatcctgggtaatcagactctgccggctgggggtcaattagtctccagtttgtctgatgctgaccactcaacaggacagtttcatctcaaaatgcagactgatggaaaccttgttctgtacccagaaaactctgaaaactctccgatagatgcctactatgctacacatactaatgggaacttgaaccttcacctctatcttagaacagatggcgttctggctctaatcaacaccatcagctcggaagtttaccgagtcatcaatacgagtggtgataatgatgatctaaccagtaatgattatccagccattaacaccgtatatcgggcaactgttggcataaacggagtatttaaggtgtattctcatcagatggatcctaagacaggcaaactccaaacacctgttattatgtggtaccaaccaaaggatccttgcgatgttaaaggcttgtgtggccttaacagctattgcgcactcaatgatgaccaaccagactgtcgttgccttcctggatcagattacgctgacctcaaccgcaggactatgggttgcttgagaaactattcagaaccggcgtgtgcagctggcgggaaagaggatacaaccttttatgacatagtcaccatggaaaatatggactggccaggtacccctgactttgtagccacaatgaccatgaaagaatgcaagaggtcttgtctagaggactgcaattgcggagcagctctgttcgacgggacaaattgtatgaaacagaggccaccactcggatatgtgagaagagatctgcagaaatcctacacagctttcttcaaggtaagcaacttaactagtcctgaaagcaagaataatggaactgaaactaaagaaccatttccgatgactcccactacggttgttatcagaagcaagaaagtcattgtgcaaattcttgttttaaccttaggtctcatcctcttctcctgtgttgcgcttgcaatatctggattttacattttcaaaattcgagttctgaggtacaaaaggctgacagaggttaatgggaatctggggctggctgatgaggaactcactatgagagttttttcatacaacgagctgaaaagggctacaaatggtttcaagcaagaattggggaagggctccttcggagcagtttacaaaggggctctaaatagagggaaaaaactcattgcagtgaaaagactagagaagttggtggaagaaggtgagagggagtttcgagcggagatgcaagcaattggaagaactcatcacaagaacttagttcggttgctgggttactctgctgaggactcgaaaaggctcctggtctatgaatatatgagcaatggctcacttgcagatcttcttttcaagaaagaatggcatccagcttgggatgaaagagtgagaattgcagttgatgtcgcaagaggtcttctctatctacatgaagagtgcaagtcccctgtcattcattgcgacataaagcctcaaaacattctgatggatgaattttggaatgcaaaaatctctgattttgggcttgcaaaactgctaatgccggatcaaacaaggaccttcacagggataagagggacaagagggtatttggcaccagaatggcaaaagaacactccaatctcagtgaaggcagatatctacagttttggtatagtgcttcttgaacttgtgtgttgcaggaggaacttggacgtcagtgttagagcagaggagatagttctttctacttggatttataagtgctttgtcagtagagagctacataggcttattgtgggtggcgaagaagtgaataagaagagcttggagaatatggttaaggtgggattatggtgtatacaagatgaaccagctctgcgtccatcaatgaagtctgtagtattgatgttacaaggcattactgatatatctatccctccatgtccaaccactgcttctatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

814

Amino Acids

90.41

Weight (kDa)

6.38

Isoelectric Point (pI)

35.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	75 - 163	1.2e-15	D-mannose binding lectin
S_locus_glycop	PF00954	289 - 329	8.6e-06	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	532 - 795	6.8e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	533 - 794	1.2e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2238
AarI	CACCTGC	1 cut(s)	277
AatII	GACGTC	1 cut(s)	2196
Acc16I	TGCGCA	1 cut(s)	946
Acc36I	ACCTGC	1 cut(s)	277
Acc65I	GGTACC	2 cut(s)	888, 1121
AccB1I	GGYRCC	3 cut(s)	888, 1121, 2092
AccB7I	CCANNNNNTGG	1 cut(s)	129
AccBSI	CCGCTC	1 cut(s)	1721
AccI	GTMKAC	2 cut(s)	213, 2338
AccII	CGCG	1 cut(s)	188
AciI	CCGC	5 cut(s)	188, 1009, 1062, 1191, 1721
AclWI	GGATC	7 cut(s)	103, 842, 855, 896, 909, 994, 2052
AcoI	YGGCCR	2 cut(s)	145, 1115
AcsI	RAATTY	5 cut(s)	155, 195, 1401, 1476, 1991
AcyI	GRCGYC	1 cut(s)	2193
AfaI	GTAC	4 cut(s)	590, 890, 1123, 1493
AfiI	CCNNNNNNNGG	8 cut(s)	129, 147, 500, 795, 857, 898, 1241, 2064
AgsI	TTSAA	7 cut(s)	454, 655, 1288, 1474, 1597, 1852, 2165
AhlI	ACTAGT	1 cut(s)	1304
AjnI	CCWGG	5 cut(s)	90, 474, 982, 1117, 1803
AjuI	GAANNNNNNNTTGG	1 cut(s)	2419
AloI	GAACNNNNNNTCC	4 cut(s)	396, 428, 567, 599
Alw21I	GWGCWC	1 cut(s)	61
Alw26I	GTCTC	2 cut(s)	517, 1427
AlwI	GGATC	7 cut(s)	103, 842, 855, 896, 909, 994, 2052
AlwNI	CAGNNNCTG	1 cut(s)	490
AoxI	GGCC	5 cut(s)	131, 145, 928, 1115, 1232
ApeKI	GCWGC	3 cut(s)	262, 1055, 1196
ApoI	RAATTY	5 cut(s)	155, 195, 1401, 1476, 1991
Asp700I	GAANNNNTTC	2 cut(s)	1036, 1347
Asp718I	GGTACC	2 cut(s)	888, 1121
AspLEI	GCGC	2 cut(s)	947, 1447
AspS9I	GGNCC	2 cut(s)	251, 2055
AsuHPI	GGTGA	6 cut(s)	110, 261, 653, 755, 1087, 1715
AsuII	TTCGAA	1 cut(s)	153
AvaII	GGWCC	2 cut(s)	251, 2055
AxyI	CCTNAGG	1 cut(s)	1417
BalI	TGGCCA	1 cut(s)	1117
BamHI	GGATCC	2 cut(s)	847, 901
BanI	GGYRCC	3 cut(s)	888, 1121, 2092
BanII	GRGCYC	3 cut(s)	61, 1619, 1645
BbsI	GAAGAC	1 cut(s)	1907
Bbv12I	GWGCWC	1 cut(s)	61
BbvCI	CCTCAGC	1 cut(s)	1785
BbvI	GCAGC	3 cut(s)	249, 1067, 1208
BccI	CCATC	9 cut(s)	17, 242, 299, 566, 674, 713, 838, 1978, 2371
BciT130I	CCWGG	5 cut(s)	92, 476, 984, 1119, 1805
BciVI	GTATCC	1 cut(s)	1066
BcoDI	GTCTC	2 cut(s)	517, 1427
BcuI	ACTAGT	1 cut(s)	1304
BfaI	CTAG	4 cut(s)	78, 1175, 1305, 1682
BfmI	CTRYAG	3 cut(s)	1262, 2140, 2376
BfuAI	ACCTGC	1 cut(s)	277
BfuI	GTATCC	1 cut(s)	1066
BglII	AGATCT	2 cut(s)	1258, 1840
BisI	GCNGC	3 cut(s)	263, 1056, 1197
BlsI	GCNGC	3 cut(s)	264, 1057, 1198
Bme1390I	CCNGG	5 cut(s)	92, 476, 984, 1119, 1805
Bme18I	GGWCC	2 cut(s)	251, 2055
BmgT120I	GGNCC	2 cut(s)	251, 2055
BmiI	GGNNCC	8 cut(s)	253, 849, 890, 903, 1123, 1618, 1802, 2094
BmrFI	CCNGG	5 cut(s)	92, 476, 984, 1119, 1805
BmsI	GCATC	4 cut(s)	517, 610, 1716, 1873
BoxI	GACNNNNGTC	1 cut(s)	333
BpiI	GAAGAC	1 cut(s)	1907
BplI	GAGNNNNNCTC	2 cut(s)	1902, 1934
BpmI	CTGGAG	2 cut(s)	93, 499
Bpu10I	CCTNAGC	1 cut(s)	1785
Bpu14I	TTCGAA	1 cut(s)	153
BpuEI	CTTGAG	1 cut(s)	1048
BsaHI	GRCGYC	1 cut(s)	2193
BsaI	GGTCTC	1 cut(s)	1427
BsaJI	CCNNGG	5 cut(s)	90, 91, 331, 475, 1098
Bsc4I	CCNNNNNNNGG	8 cut(s)	129, 147, 500, 795, 857, 898, 1241, 2064
Bse118I	RCCGGY	3 cut(s)	147, 493, 1045
Bse1I	ACTGG	4 cut(s)	324, 516, 762, 1118
Bse21I	CCTNAGG	1 cut(s)	1417
Bse3DI	GCAATG	4 cut(s)	15, 1665, 1831, 1954
BseBI	CCWGG	5 cut(s)	92, 476, 984, 1119, 1805
BseDI	CCNNGG	5 cut(s)	90, 91, 331, 475, 1098
BseGI	GGATG	5 cut(s)	457, 1425, 1864, 1882, 1993
BseLI	CCNNNNNNNGG	8 cut(s)	129, 147, 500, 795, 857, 898, 1241, 2064
BseMI	GCAATG	4 cut(s)	15, 1665, 1831, 1954
BseMII	CTCAG	3 cut(s)	1478, 1776, 2136
BseNI	ACTGG	4 cut(s)	324, 516, 762, 1118
BseRI	GAGGAG	2 cut(s)	69, 2225
BseXI	GCAGC	3 cut(s)	249, 1067, 1208
BseYI	CCCAGC	3 cut(s)	122, 497, 1771
BsgI	GTGCAG	3 cut(s)	305, 311, 1074
Bsh1236I	CGCG	1 cut(s)	188
BshFI	GGCC	5 cut(s)	133, 147, 930, 1117, 1234
BshNI	GGYRCC	3 cut(s)	888, 1121, 2092
BsiHKAI	GWGCWC	1 cut(s)	61
BsiSI	CCGG	4 cut(s)	148, 494, 1046, 2042
BslFI	GGGAC	4 cut(s)	237, 1225, 1927, 2089
BslI	CCNNNNNNNGG	8 cut(s)	129, 147, 500, 795, 857, 898, 1241, 2064
BsmAI	GTCTC	2 cut(s)	517, 1427
BsmFI	GGGAC	4 cut(s)	237, 1225, 1927, 2089
BsmI	GAATGC	2 cut(s)	1163, 2005
BsnI	GGCC	5 cut(s)	133, 147, 930, 1117, 1234
Bso31I	GGTCTC	1 cut(s)	1427
Bsp119I	TTCGAA	1 cut(s)	153
Bsp1286I	GDGCHC	3 cut(s)	61, 1619, 1645
Bsp143I	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
Bsp19I	CCATGG	1 cut(s)	1098
BspACI	CCGC	5 cut(s)	188, 1009, 1062, 1191, 1721
BspANI	GGCC	5 cut(s)	133, 147, 930, 1117, 1234
BspCNI	CTCAG	3 cut(s)	1479, 1777, 2135
BspFNI	CGCG	1 cut(s)	188
BspLI	GGNNCC	8 cut(s)	253, 849, 890, 903, 1123, 1618, 1802, 2094
BspMAI	CTGCAG	1 cut(s)	1266
BspMI	ACCTGC	1 cut(s)	277
BspPI	GGATC	7 cut(s)	103, 842, 855, 896, 909, 994, 2052
BspQI	GCTCTTC	1 cut(s)	2294
BspT104I	TTCGAA	1 cut(s)	153
BspT107I	GGYRCC	3 cut(s)	888, 1121, 2092
BspTNI	GGTCTC	1 cut(s)	1427
BsrBI	CCGCTC	1 cut(s)	1721
BsrDI	GCAATG	4 cut(s)	15, 1665, 1831, 1954
BsrFI	RCCGGY	3 cut(s)	147, 493, 1045
BsrI	ACTGG	4 cut(s)	324, 516, 762, 1118
BssAI	RCCGGY	3 cut(s)	147, 493, 1045
BssECI	CCNNGG	5 cut(s)	90, 91, 331, 475, 1098
BssMI	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
BssNAI	GTATAC	1 cut(s)	2339
BssNI	GRCGYC	1 cut(s)	2193
BssT1I	CCWWGG	2 cut(s)	331, 1098
Bst1107I	GTATAC	1 cut(s)	2339
Bst2UI	CCWGG	5 cut(s)	92, 476, 984, 1119, 1805
Bst4CI	ACNGT	9 cut(s)	229, 245, 371, 549, 790, 805, 971, 1369, 2144
Bst6I	CTCTTC	5 cut(s)	35, 1249, 1436, 1926, 2294
BstACI	GRCGYC	1 cut(s)	2193
BstBI	TTCGAA	1 cut(s)	153
BstC8I	GCNNGC	7 cut(s)	311, 495, 1060, 1449, 1530, 1731, 2025
BstDEI	CTNAG	7 cut(s)	671, 852, 1417, 1487, 1759, 1785, 2122
BstDSI	CCRYGG	1 cut(s)	1098
BstENI	CCTNNNNNAGG	1 cut(s)	855
BstF5I	GGATG	5 cut(s)	457, 1425, 1864, 1882, 1993
BstFNI	CGCG	1 cut(s)	188
BstHHI	GCGC	2 cut(s)	947, 1447
BstKTI	GATC	9 cut(s)	98, 441, 757, 850, 904, 989, 1261, 1843, 2047
BstMAI	GTCTC	2 cut(s)	517, 1427
BstMBI	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
BstMWI	GCNNNNNNNGC	5 cut(s)	629, 927, 936, 1055, 2266
BstNI	CCWGG	5 cut(s)	92, 476, 984, 1119, 1805
BstPAI	GACNNNNGTC	1 cut(s)	333
BstSCI	CCNGG	5 cut(s)	90, 474, 982, 1117, 1803
BstSFI	CTRYAG	3 cut(s)	1262, 2140, 2376
BstUI	CGCG	1 cut(s)	188
BstV1I	GCAGC	3 cut(s)	249, 1067, 1208
BstV2I	GAAGAC	1 cut(s)	1907
BstX2I	RGATCY	5 cut(s)	95, 847, 901, 1258, 1840
BstYI	RGATCY	5 cut(s)	95, 847, 901, 1258, 1840
BstZ17I	GTATAC	1 cut(s)	2339
Bsu36I	CCTNAGG	1 cut(s)	1417
BsuI	GTATCC	1 cut(s)	1066
BsuRI	GGCC	5 cut(s)	133, 147, 930, 1117, 1234
BtgI	CCRYGG	1 cut(s)	1098
BtgZI	GCGATG	2 cut(s)	337, 924
BtsCI	GGATG	5 cut(s)	457, 1425, 1864, 1882, 1993
BtsI	GCAGTG	3 cut(s)	257, 1677, 2430
BtsIMutI	CAGTG	6 cut(s)	257, 331, 1677, 2130, 2203, 2430
BveI	ACCTGC	1 cut(s)	277
Cac8I	GCNNGC	7 cut(s)	311, 495, 1060, 1449, 1530, 1731, 2025
CaiI	CAGNNNCTG	1 cut(s)	490
CfoI	GCGC	2 cut(s)	947, 1447
Cfr10I	RCCGGY	3 cut(s)	147, 493, 1045
Cfr13I	GGNCC	2 cut(s)	251, 2055
CseI	GACGC	1 cut(s)	2348
Csp6I	GTAC	4 cut(s)	589, 889, 1122, 1492
CspCI	CAANNNNNGTGG	4 cut(s)	721, 756, 1351, 1386
CviAII	CATG	6 cut(s)	129, 391, 1099, 1150, 1928, 2421
CviQI	GTAC	4 cut(s)	589, 889, 1122, 1492
DdeI	CTNAG	7 cut(s)	671, 852, 1417, 1487, 1759, 1785, 2122
DpnI	GATC	9 cut(s)	97, 440, 756, 849, 903, 988, 1260, 1842, 2046
DpnII	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
EaeI	YGGCCR	2 cut(s)	145, 1115
Eam1104I	CTCTTC	5 cut(s)	35, 1249, 1436, 1926, 2294
EarI	CTCTTC	5 cut(s)	35, 1249, 1436, 1926, 2294
Ecl136II	GAGCTC	1 cut(s)	59
Eco130I	CCWWGG	2 cut(s)	331, 1098
Eco24I	GRGCYC	3 cut(s)	61, 1619, 1645
Eco31I	GGTCTC	1 cut(s)	1427
Eco32I	GATATC	1 cut(s)	2137
Eco47I	GGWCC	2 cut(s)	251, 2055
Eco53kI	GAGCTC	1 cut(s)	59
Eco81I	CCTNAGG	1 cut(s)	1417
EcoICRI	GAGCTC	1 cut(s)	59
EcoNI	CCTNNNNNAGG	1 cut(s)	855
EcoO109I	RGGNCCY	1 cut(s)	2055
EcoRI	GAATTC	1 cut(s)	155
EcoRII	CCWGG	5 cut(s)	90, 474, 982, 1117, 1803
EcoRV	GATATC	1 cut(s)	2137
EcoT14I	CCWWGG	2 cut(s)	331, 1098
EcoT38I	GRGCYC	3 cut(s)	61, 1619, 1645
ErhI	CCWWGG	2 cut(s)	331, 1098
FaeI	CATG	6 cut(s)	132, 394, 1102, 1153, 1931, 2424
FalI	AAGNNNNNCTT	4 cut(s)	1604, 1636, 2288, 2320
FaqI	GGGAC	4 cut(s)	237, 1225, 1927, 2089
FatI	CATG	6 cut(s)	128, 390, 1098, 1149, 1927, 2420
FauI	CCCGC	1 cut(s)	1055
FblI	GTMKAC	2 cut(s)	213, 2338
Fnu4HI	GCNGC	3 cut(s)	263, 1056, 1197
FokI	GGATG	5 cut(s)	444, 1412, 1851, 1889, 2000
FriOI	GRGCYC	3 cut(s)	61, 1619, 1645
Fsp4HI	GCNGC	3 cut(s)	263, 1056, 1197
FspBI	CTAG	4 cut(s)	78, 1175, 1305, 1682
FspI	TGCGCA	1 cut(s)	946
GlaI	GCGC	2 cut(s)	946, 1446
GluI	GCNGC	3 cut(s)	263, 1056, 1197
GsaI	CCCAGC	3 cut(s)	126, 501, 1775
GsuI	CTGGAG	2 cut(s)	93, 499
HaeIII	GGCC	5 cut(s)	133, 147, 930, 1117, 1234
HapII	CCGG	4 cut(s)	148, 494, 1046, 2042
HgaI	GACGC	1 cut(s)	2348
HhaI	GCGC	2 cut(s)	947, 1447
Hin1I	GRCGYC	1 cut(s)	2193
Hin1II	CATG	6 cut(s)	132, 394, 1102, 1153, 1931, 2424
Hin6I	GCGC	2 cut(s)	945, 1445
HinP1I	GCGC	2 cut(s)	945, 1445
HindIII	AAGCTT	1 cut(s)	311
HinfI	GANTC	6 cut(s)	398, 487, 726, 1357, 1519, 1790
HpaII	CCGG	4 cut(s)	148, 494, 1046, 2042
HphI	GGTGA	6 cut(s)	110, 261, 653, 755, 1087, 1715
Hpy166II	GTNNAC	4 cut(s)	214, 721, 1633, 2339
Hpy188III	TCNNGA	7 cut(s)	110, 402, 1175, 1310, 1458, 1852, 2162
Hpy8I	GTNNAC	4 cut(s)	214, 721, 1633, 2339
Hpy99I	CGWCG	2 cut(s)	425, 1211
HpyAV	CCTTC	9 cut(s)	35, 144, 668, 989, 1606, 1630, 1694, 2068, 2122
HpyCH4III	ACNGT	9 cut(s)	229, 245, 371, 549, 790, 805, 971, 1369, 2144
HpyCH4IV	ACGT	1 cut(s)	2193
HpyF10VI	GCNNNNNNNGC	5 cut(s)	629, 927, 936, 1055, 2266
HpyF3I	CTNAG	7 cut(s)	671, 852, 1417, 1487, 1759, 1785, 2122
HpySE526I	ACGT	1 cut(s)	2193
Hsp92I	GRCGYC	1 cut(s)	2193
Hsp92II	CATG	6 cut(s)	132, 394, 1102, 1153, 1931, 2424
HspAI	GCGC	2 cut(s)	945, 1445
KpnI	GGTACC	2 cut(s)	892, 1125
KroI	GCCGGC	1 cut(s)	493
KroNI	GCCGGC	1 cut(s)	495
Kzo9I	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
LguI	GCTCTTC	1 cut(s)	2294
LmnI	GCTCC	5 cut(s)	56, 1193, 1622, 1625, 1806
Lsp1109I	GCAGC	3 cut(s)	249, 1067, 1208
LweI	GCATC	4 cut(s)	517, 610, 1716, 1873
MaeI	CTAG	4 cut(s)	78, 1175, 1305, 1682
MaeII	ACGT	1 cut(s)	2193
MaeIII	GTNAC	4 cut(s)	326, 1093, 1775, 2388
MalI	GATC	9 cut(s)	97, 440, 756, 849, 903, 988, 1260, 1842, 2046
MbiI	CCGCTC	1 cut(s)	1721
MboI	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
MfeI	CAATTG	2 cut(s)	1186, 1734
MflI	RGATCY	5 cut(s)	95, 847, 901, 1258, 1840
MhlI	GDGCHC	3 cut(s)	61, 1619, 1645
MlsI	TGGCCA	1 cut(s)	1117
MluNI	TGGCCA	1 cut(s)	1117
MlyI	GAGTC	4 cut(s)	481, 735, 1351, 1784
MmeI	TCCRAC	1 cut(s)	172
Mox20I	TGGCCA	1 cut(s)	1117
MroNI	GCCGGC	1 cut(s)	493
MroXI	GAANNNNTTC	2 cut(s)	1036, 1347
MscI	TGGCCA	1 cut(s)	1117
MseI	TTAA	8 cut(s)	783, 825, 915, 933, 1301, 1412, 1512, 2319
MslI	CAYNNNNRTG	4 cut(s)	642, 1670, 1982, 2098
Msp20I	TGGCCA	1 cut(s)	1117
MspA1I	CMGCKG	1 cut(s)	1058
MspI	CCGG	4 cut(s)	148, 494, 1046, 2042
MspR9I	CCNGG	5 cut(s)	92, 476, 984, 1119, 1805
MunI	CAATTG	2 cut(s)	1186, 1734
Mva1269I	GAATGC	2 cut(s)	1163, 2005
MvaI	CCWGG	5 cut(s)	92, 476, 984, 1119, 1805
MvnI	CGCG	1 cut(s)	188
MwoI	GCNNNNNNNGC	5 cut(s)	629, 927, 936, 1055, 2266
NaeI	GCCGGC	1 cut(s)	495
NcoI	CCATGG	1 cut(s)	1098
NdeII	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
NgoMIV	GCCGGC	1 cut(s)	493
NlaIII	CATG	6 cut(s)	132, 394, 1102, 1153, 1931, 2424
NlaIV	GGNNCC	8 cut(s)	253, 849, 890, 903, 1123, 1618, 1802, 2094
NmuCI	GTSAC	2 cut(s)	326, 1093
NsbI	TGCGCA	1 cut(s)	946
NspV	TTCGAA	1 cut(s)	153
PaqCI	CACCTGC	1 cut(s)	277
PasI	CCCWGGG	1 cut(s)	91
PciSI	GCTCTTC	1 cut(s)	2294
PcsI	WCGNNNNNNNCGW	1 cut(s)	417
PctI	GAATGC	2 cut(s)	1163, 2005
PdiI	GCCGGC	1 cut(s)	495
PdmI	GAANNNNTTC	2 cut(s)	1036, 1347
PfeI	GAWTC	2 cut(s)	398, 1519
PflFI	GACNNNGTC	1 cut(s)	1091
PflMI	CCANNNNNTGG	1 cut(s)	129
PfoI	TCCNGGA	1 cut(s)	982
PkrI	GCNGC	3 cut(s)	264, 1057, 1198
PleI	GAGTC	4 cut(s)	481, 734, 1351, 1784
PpsI	GAGTC	4 cut(s)	481, 734, 1351, 1784
PpuMI	RGGWCCY	1 cut(s)	2055
PshAI	GACNNNNGTC	1 cut(s)	333
PsiI	TTATAA	1 cut(s)	2238
Psp124BI	GAGCTC	1 cut(s)	61
Psp5II	RGGWCCY	1 cut(s)	2055
Psp6I	CCWGG	5 cut(s)	90, 474, 982, 1117, 1803
PspFI	CCCAGC	3 cut(s)	122, 497, 1771
PspGI	CCWGG	5 cut(s)	90, 474, 982, 1117, 1803
PspN4I	GGNNCC	8 cut(s)	253, 849, 890, 903, 1123, 1618, 1802, 2094
PspPI	GGNCC	2 cut(s)	251, 2055
PspPPI	RGGWCCY	1 cut(s)	2055
PstI	CTGCAG	1 cut(s)	1266
PstNI	CAGNNNCTG	1 cut(s)	490
PsuI	RGATCY	5 cut(s)	95, 847, 901, 1258, 1840
PsyI	GACNNNGTC	1 cut(s)	1091
PvuII	CAGCTG	1 cut(s)	1058
RsaI	GTAC	4 cut(s)	590, 890, 1123, 1493
RsaNI	GTAC	4 cut(s)	589, 889, 1122, 1492
RseI	CAYNNNNRTG	4 cut(s)	642, 1670, 1982, 2098
SacI	GAGCTC	1 cut(s)	61
SapI	GCTCTTC	1 cut(s)	2294
SaqAI	TTAA	8 cut(s)	783, 825, 915, 933, 1301, 1412, 1512, 2319
SatI	GCNGC	3 cut(s)	263, 1056, 1197
Sau3AI	GATC	9 cut(s)	95, 438, 754, 847, 901, 986, 1258, 1840, 2044
Sau96I	GGNCC	2 cut(s)	251, 2055
SchI	GAGTC	4 cut(s)	481, 735, 1351, 1784
ScrFI	CCNGG	5 cut(s)	92, 476, 984, 1119, 1805
SduI	GDGCHC	3 cut(s)	61, 1619, 1645
SfaNI	GCATC	4 cut(s)	517, 610, 1716, 1873
SfcI	CTRYAG	3 cut(s)	1262, 2140, 2376
SfuI	TTCGAA	1 cut(s)	153
SinI	GGWCC	2 cut(s)	251, 2055
SmiMI	CAYNNNNRTG	4 cut(s)	642, 1670, 1982, 2098
SmlI	CTYRAG	1 cut(s)	1027
SmoI	CTYRAG	1 cut(s)	1027
SpeI	ACTAGT	1 cut(s)	1304
SsiI	CCGC	5 cut(s)	188, 1009, 1062, 1191, 1721
SspMI	CTAG	4 cut(s)	78, 1175, 1305, 1682
SstI	GAGCTC	1 cut(s)	61
StyD4I	CCNGG	5 cut(s)	90, 474, 982, 1117, 1803
StyI	CCWWGG	2 cut(s)	331, 1098
TaaI	ACNGT	9 cut(s)	229, 245, 371, 549, 790, 805, 971, 1369, 2144
TaiI	ACGT	1 cut(s)	2196
TaqI	TCGA	5 cut(s)	153, 1206, 1480, 1717, 1793
TfiI	GAWTC	2 cut(s)	398, 1519
Tru1I	TTAA	8 cut(s)	783, 825, 915, 933, 1301, 1412, 1512, 2319
Tru9I	TTAA	8 cut(s)	783, 825, 915, 933, 1301, 1412, 1512, 2319
TscAI	CASTG	6 cut(s)	264, 331, 1677, 2130, 2203, 2437
TseFI	GTSAC	2 cut(s)	326, 1093
TseI	GCWGC	3 cut(s)	262, 1055, 1196
Tsp45I	GTSAC	2 cut(s)	326, 1093
TspGWI	ACGGA	2 cut(s)	231, 831
TspRI	CASTG	6 cut(s)	264, 331, 1677, 2130, 2203, 2437
Tth111I	GACNNNGTC	1 cut(s)	1091
Van91I	CCANNNNNTGG	1 cut(s)	129
VpaK11BI	GGWCC	2 cut(s)	251, 2055
XagI	CCTNNNNNAGG	1 cut(s)	855
XapI	RAATTY	5 cut(s)	155, 195, 1401, 1476, 1991
XbaI	TCTAGA	1 cut(s)	1174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1105
XmiI	GTMKAC	2 cut(s)	213, 2338
XmnI	GAANNNNTTC	2 cut(s)	1036, 1347
XspI	CTAG	4 cut(s)	78, 1175, 1305, 1682
ZraI	GACGTC	1 cut(s)	2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.