Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006531.1

Orthogroup ID

OG0001828

Physical Location & Seq

Genomic Coordinates Reverse (-)

7081 .. 19265

Gene Structure 12185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006531.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3096 bp

atggttctcttcttcctcatcctcgtcctcgtcctcgtcgatcaccaaaacccccaaagatttcgactttccacaactatggcttcctccaccaccgacgacctcaagaaaaccctcggcgacctcgacaagggctcctccatatccctcctctccaagctcatcggcgaggccaacacgtgctcgcctttcttgccccttagcaccaccaccggcggcggacctttcctcatcaatcatgtgacttaccaccccggcaggggcaacgtgattgtggagtacccagggactgtgccagggaaagtgttgtcctttgtggggtgccacatggacgccgtcactgccaatcctgatgattgggtccatcttacctggtctgaattcgacagcgatgactctgaagcagtcggtggtggtggagctggcatcgtctcatccaaaaacaaaatggaagactcaccggaaatactacgaaactcactccagaactccggcattcgggtcccctacgacgggccgcctgtccgagacctcacaccggccactttagtctcaatctgtggtcaatcccttagcctcatcgccgaaacgtcgtcattttcgacctcacttcccgattcctccatcacctaccagttcaacgtctgtatggacatggcttctgggatcaacaacctcggctacccaggcaacgtgagcttccacaaggttatctttgtcacattagctgctagcctttacagctttaatcttctcagaattcaaaccaatcagaggatatgctttctgaatgtcagtcccgatgaagttataagaagcttgttttataataaaaacaatgactcacttatcacagtttcagtttatgcttcagacaatttcagttctttgaaatgtagaagcacgaggattgaatacatacgaaggggtaaaccagatgctggctttgctctttttgagtctgagtcactaaagtggcctggatttgtagagtttgatgatgtaaatgggaaggttctcacttactctgcacaagatagtatatacaaggtgtttgatcttaaaaactatacaatgttgtactccatatcagataaacatgtccaagaaattaagattagtccggggatcatgttgttaattttcaataaagctagtagccatgttcctctcaagattctttctatagaggatggtagtgttctcaaatccttcaaccatctacttcatcggaataagaaggtagatttcattgaacagttcaatgaaaagcttcttgtaaaacaagaaaatgagaacctccagattcttgacgttcgcaattctgagatgacagaagttagcaaaagtgaattcatgacaccatcggcttttatatttctgtacgagaatcagttatttttaacgtttcgtaatcgtactgtggctgtttggaactttcgaggggaacttgtgacttcgtttgaggatcatcttttgtggcatcccgactgcaatactaataacatatatattactagtgaccaggatcttattatttcttactgcaaggctgattctgatgatccattagctgaaggaaatgcaggatccatcaatatcagcaatattttgacagggaaatgccttgctaaaataaaagccagcaagaatgtggaaaatgaatgcagttgtagtggtgactgttgtggaagcagttgcagttccaagaagcgtgcccagtcatccagaattagaagtacagtcgcagaagccttggaagatattactgctctcttctacgatgaagagcgcaacgagatctatactggcaataggcttgctgctgctgctgatcaaactgcaaatataagcttggggtcgtccctaactgcatcagacaactctaaaccgtggcattctccctccggggaatttgcgtatggatttcgccggattggtgatcaggacctcttcttgcttgccatatggtatgacaagataccagaaaagactattgtttggtacgcaaatggagacaatccagcaccaaaaggatccaaagtggagctcacgaaggatggtcatttcaggctcactagccctcggaaagaagatctctggccccagcctgttattagtggagttgcttatgctgccctgcttgactcaggcaactttgttcttgcaaaccagaattcatcagctcctttatggcagagcttcaaagaccccagagacaccattttaccaaccctagtgttggaaattggagaaaagctatcttccaggcagactgccaccaactactcaaagggccagtttcaactccaatttaaaccatccggtacgcttgagctgtatctcatagccttgcctacagaagcgagtgcaatagccaagacccatcacaaaaacctcgtcagattgctcggcttttgtgatgaaggggaaaataaactcctagtctatgagtttatgagcaatggaacactggctagctttctgtttgggatttcaaggcctgattggaacaaacggatccaaattgcgtttggtattgccagagggctaatgtacttacacgacgagtgtagcactcagatcatccactgtgatatcaaaccccccaacatacttctcgatgattcatatacagcaaggatttcggatttcggattggcaaagcttctgctaagtgatcaaactctgactcatacagtcattagagggaccagagggtatgttgcaccagaatggttcagaaatactccagttactgcaaaggttgatgtttacagttatggggtgatgctgttggagattatctgttgcaggaggagcctcgaaatggaaagggaaaatgaagaagaggcgatactaactgactgggtttacgattgctacgcgcaaaggagattaaacaagatgatcgaggacgatgaggaggccagaaatgacatgaaaaggttggagaggctagtaatggtggcaatttggtgcatacaagaggatccatctttgagacccaccatgaagaaggttacacaaatgctcgaaggagtggttgatgtatctgtacctccaagtccttctccttttagttcaatttgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1031

Amino Acids

115.08

Weight (kDa)

5.43

Isoelectric Point (pI)

44.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38630 AT2G38630 AT2G38630 AT3G54190
fragaria_vesca	FvH4_6g09240 FvH4_6g09240 FvH4_6g09240 FvH4_6g09240 FvH4_6g09240 FvH4_7g26350 FvH4_7g26350 FvH4_7g26350 FvH4_7g26350
malus_domestica	MD01G1172600.v1.1 MD04G1179700.v1.1 MD07G1238900.v1.1 MD12G1194800.v1.1
prunus_persica	Prupe.2G267700_v2.0.a1 Prupe.2G267700_v2.0.a1 Prupe.2G267700_v2.0.a1 Prupe.2G267700_v2.0.a1 Prupe.6G299700_v2.0.a1 Prupe.6G299700_v2.0.a1
pyrus_communis	pycom01g18410 pycom04g15870 pycom07g21490 pycom12g18100
rosa_chinensis	RchiOBHm_Chr1g0372891 RchiOBHm_Chr3g0459581
rosa_laevigata	RLG00000025078 RLG00000026868
rosa_multiflora	Rmu_sc0000240.1_g000010 Rmu_sc0006531.1_g000003 Rmu_sc0011206.1_g000004 Rmu_sc0034641.1_g000001
rosa_roxburghii	Rroxscaffold_4G00284650 Rroxscaffold_6G00420170
rosa_rugosa	Rorug01G0374600 Rorug01G0374700 Rorug03G0036500
rosa_samantha	Rh1CG360500 Rh1DG378000 Rh3AG095400 Rh3CG099700
rosa_wichuraiana	Rw0G013860 Rw0G017570 Rw1G033760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	812, 828
AccB1I	GGYRCC	1 cut(s)	321
AccB7I	CCANNNNNTGG	1 cut(s)	941
AccII	CGCG	1 cut(s)	2888
AciI	CCGC	3 cut(s)	216, 219, 518
AclI	AACGTT	1 cut(s)	1406
AcoI	YGGCCR	1 cut(s)	540
AcsI	RAATTY	5 cut(s)	380, 759, 1352, 1913, 2176
AcuI	CTGAAG	3 cut(s)	420, 855, 1596
AcvI	CACGTG	1 cut(s)	180
AcyI	GRCGYC	1 cut(s)	333
AfaI	GTAC	9 cut(s)	281, 1082, 1385, 1420, 1741, 2006, 2329, 2558, 3060
AflIII	ACRYGT	2 cut(s)	177, 1099
AhlI	ACTAGT	1 cut(s)	1517
AjnI	CCWGG	7 cut(s)	283, 295, 371, 685, 979, 1524, 2267
AleI	CACNNNNGTG	1 cut(s)	973
Alw21I	GWGCWC	2 cut(s)	185, 2052
Alw26I	GTCTC	6 cut(s)	436, 522, 556, 2010, 2211, 2998
AlwNI	CAGNNNCTG	3 cut(s)	290, 941, 2759
AoxI	GGCC	8 cut(s)	171, 515, 540, 977, 2102, 2296, 2501, 2928
ApeKI	GCWGC	5 cut(s)	728, 1823, 1826, 1829, 2135
ApoI	RAATTY	5 cut(s)	380, 759, 1352, 1913, 2176
ArsI	GACNNNNNNTTYG	2 cut(s)	2385, 2417
Asp700I	GAANNNNTTC	1 cut(s)	1272
AspLEI	GCGC	2 cut(s)	1794, 2890
AspS9I	GGNCC	8 cut(s)	221, 361, 502, 515, 1948, 2103, 2296, 2712
AsuC2I	CCSGG	3 cut(s)	255, 1125, 1909
AsuHPI	GGTGA	6 cut(s)	35, 450, 619, 1691, 1952, 2800
AsuNHI	GCTAGC	2 cut(s)	731, 2477
AvaII	GGWCC	5 cut(s)	221, 361, 502, 1948, 2712
BaeGI	GKGCMC	1 cut(s)	1720
BamHI	GGATCC	4 cut(s)	1589, 2036, 2520, 2992
BanI	GGYRCC	1 cut(s)	321
BanII	GRGCYC	2 cut(s)	137, 2052
BarI	GAAGNNNNNNTAC	2 cut(s)	2841, 2873
BauI	CACGAG	1 cut(s)	904
BbrPI	CACGTG	1 cut(s)	180
BbsI	GAAGAC	1 cut(s)	459
Bbv12I	GWGCWC	2 cut(s)	185, 2052
BbvI	GCAGC	5 cut(s)	715, 1810, 1813, 1816, 2122
BceAI	ACGGC	1 cut(s)	320
BcgI	CGANNNNNNTGC	2 cut(s)	2628, 2662
BciT130I	CCWGG	7 cut(s)	285, 297, 373, 687, 981, 1526, 2269
BclI	TGATCA	3 cut(s)	1834, 1942, 2680
BcnI	CCSGG	3 cut(s)	255, 1125, 1909
BcoDI	GTCTC	6 cut(s)	436, 522, 556, 2010, 2211, 2998
BcuI	ACTAGT	1 cut(s)	1517
BfaI	CTAG	8 cut(s)	732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
BfmI	CTRYAG	2 cut(s)	1185, 2358
BglII	AGATCT	2 cut(s)	1800, 2095
BisI	GCNGC	7 cut(s)	217, 518, 729, 1824, 1827, 1830, 2136
BlsI	GCNGC	7 cut(s)	218, 519, 730, 1825, 1828, 1831, 2137
Bme18I	GGWCC	5 cut(s)	221, 361, 502, 1948, 2712
BmgT120I	GGNCC	8 cut(s)	221, 361, 502, 515, 1948, 2103, 2296, 2712
BmrI	ACTGGG	2 cut(s)	1714, 2878
BmsI	GCATC	5 cut(s)	435, 928, 1492, 1883, 2781
BmtI	GCTAGC	2 cut(s)	735, 2481
BmuI	ACTGGG	2 cut(s)	1714, 2878
BpiI	GAAGAC	1 cut(s)	459
BpmI	CTGGAG	3 cut(s)	467, 1286, 2736
Bpu10I	CCTNAGC	2 cut(s)	200, 572
BpuEI	CTTGAG	3 cut(s)	89, 1157, 2354
BpuMI	CCSGG	3 cut(s)	255, 1125, 1909
BsaAI	YACGTR	1 cut(s)	180
BsaHI	GRCGYC	1 cut(s)	333
BsaI	GGTCTC	2 cut(s)	522, 2998
BsaWI	WCCGGW	2 cut(s)	460, 2324
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bse118I	RCCGGY	2 cut(s)	212, 538
Bse1I	ACTGG	7 cut(s)	634, 1720, 1813, 2299, 2478, 2753, 2873
Bse3DI	GCAATG	1 cut(s)	2470
BseBI	CCWGG	7 cut(s)	285, 297, 373, 687, 981, 1526, 2269
BseGI	GGATG	8 cut(s)	18, 434, 1198, 1483, 1724, 2065, 2321, 2586
BseMI	GCAATG	1 cut(s)	2470
BseMII	CTCAG	5 cut(s)	769, 954, 1317, 2163, 2594
BseNI	ACTGG	7 cut(s)	634, 1720, 1813, 2299, 2478, 2753, 2873
BseRI	GAGGAG	4 cut(s)	127, 140, 2833, 2939
BseSI	GKGCMC	1 cut(s)	1720
BseXI	GCAGC	5 cut(s)	715, 1810, 1813, 1816, 2122
BseYI	CCCAGC	1 cut(s)	2106
BsgI	GTGCAG	1 cut(s)	1014
Bsh1236I	CGCG	1 cut(s)	2888
BshFI	GGCC	8 cut(s)	173, 517, 542, 979, 2104, 2298, 2503, 2930
BshNI	GGYRCC	1 cut(s)	321
BsiHKAI	GWGCWC	2 cut(s)	185, 2052
BsiSI	CCGG	9 cut(s)	213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
BslFI	GGGAC	5 cut(s)	301, 488, 783, 1849, 2725
BsmAI	GTCTC	6 cut(s)	436, 522, 556, 2010, 2211, 2998
BsmBI	CGTCTC	1 cut(s)	436
BsmFI	GGGAC	5 cut(s)	301, 488, 783, 1849, 2725
BsmI	GAATGC	3 cut(s)	495, 1670, 1897
BsnI	GGCC	8 cut(s)	173, 517, 542, 979, 2104, 2298, 2503, 2930
Bso31I	GGTCTC	2 cut(s)	522, 2998
Bsp1286I	GDGCHC	4 cut(s)	137, 185, 1720, 2052
BspACI	CCGC	3 cut(s)	216, 219, 518
BspANI	GGCC	8 cut(s)	173, 517, 542, 979, 2104, 2298, 2503, 2930
BspCNI	CTCAG	5 cut(s)	768, 955, 1318, 2162, 2593
BspFNI	CGCG	1 cut(s)	2888
BspHI	TCATGA	1 cut(s)	1356
BspOI	GCTAGC	2 cut(s)	735, 2481
BspQI	GCTCTTC	1 cut(s)	1782
BspT107I	GGYRCC	1 cut(s)	321
BspTNI	GGTCTC	2 cut(s)	522, 2998
BsrDI	GCAATG	1 cut(s)	2470
BsrFI	RCCGGY	2 cut(s)	212, 538
BsrI	ACTGG	7 cut(s)	634, 1720, 1813, 2299, 2478, 2753, 2873
BssAI	RCCGGY	2 cut(s)	212, 538
BssNI	GRCGYC	1 cut(s)	333
BssSI	CACGAG	1 cut(s)	904
BssT1I	CCWWGG	1 cut(s)	1755
Bst2BI	CACGAG	1 cut(s)	904
Bst2UI	CCWGG	7 cut(s)	285, 297, 373, 687, 981, 1526, 2269
Bst6I	CTCTTC	5 cut(s)	14, 1781, 1782, 1958, 2844
BstACI	GRCGYC	1 cut(s)	333
BstBAI	YACGTR	1 cut(s)	180
BstC8I	GCNNGC	9 cut(s)	185, 424, 733, 943, 1645, 1716, 1821, 1962, 2479
BstDEI	CTNAG	8 cut(s)	200, 572, 755, 963, 1326, 2149, 2580, 2675
BstDSI	CCRYGG	1 cut(s)	1892
BstENI	CCTNNNNNAGG	1 cut(s)	128
BstF5I	GGATG	8 cut(s)	18, 434, 1198, 1483, 1724, 2065, 2321, 2586
BstFNI	CGCG	1 cut(s)	2888
BstHHI	GCGC	2 cut(s)	1794, 2890
BstMAI	GTCTC	6 cut(s)	436, 522, 556, 2010, 2211, 2998
BstMWI	GCNNNNNNNGC	9 cut(s)	193, 341, 687, 696, 741, 947, 1829, 2135, 2820
BstNI	CCWGG	7 cut(s)	285, 297, 373, 687, 981, 1526, 2269
BstNSI	RCATGY	1 cut(s)	1103
BstSFI	CTRYAG	2 cut(s)	1185, 2358
BstSLI	GKGCMC	1 cut(s)	1720
BstUI	CGCG	1 cut(s)	2888
BstV1I	GCAGC	5 cut(s)	715, 1810, 1813, 1816, 2122
BstV2I	GAAGAC	1 cut(s)	459
BstX2I	RGATCY	7 cut(s)	1528, 1589, 1800, 2036, 2095, 2520, 2992
BstXI	CCANNNNNNTGG	1 cut(s)	79
BstYI	RGATCY	7 cut(s)	1528, 1589, 1800, 2036, 2095, 2520, 2992
BsuRI	GGCC	8 cut(s)	173, 517, 542, 979, 2104, 2298, 2503, 2930
BtgI	CCRYGG	1 cut(s)	1892
BtgZI	GCGATG	2 cut(s)	405, 565
BtsCI	GGATG	8 cut(s)	18, 434, 1198, 1483, 1724, 2065, 2321, 2586
BtsI	GCAGTG	1 cut(s)	339
BtsIMutI	CAGTG	3 cut(s)	339, 2471, 2590
Cac8I	GCNNGC	9 cut(s)	185, 424, 733, 943, 1645, 1716, 1821, 1962, 2479
CaiI	CAGNNNCTG	3 cut(s)	290, 941, 2759
CciI	TCATGA	1 cut(s)	1356
CfoI	GCGC	2 cut(s)	1794, 2890
Cfr10I	RCCGGY	2 cut(s)	212, 538
Cfr13I	GGNCC	8 cut(s)	221, 361, 502, 515, 1948, 2103, 2296, 2712
CseI	GACGC	1 cut(s)	341
CsiI	ACCWGGT	1 cut(s)	371
Csp6I	GTAC	9 cut(s)	280, 1081, 1384, 1419, 1740, 2005, 2328, 2557, 3059
CviAII	CATG	9 cut(s)	239, 328, 655, 1100, 1132, 1163, 1357, 2941, 3013
CviQI	GTAC	9 cut(s)	280, 1081, 1384, 1419, 1740, 2005, 2328, 2557, 3059
DdeI	CTNAG	8 cut(s)	200, 572, 755, 963, 1326, 2149, 2580, 2675
DraI	TTTAAA	1 cut(s)	2317
EaeI	YGGCCR	1 cut(s)	540
Eam1104I	CTCTTC	5 cut(s)	14, 1781, 1782, 1958, 2844
EarI	CTCTTC	5 cut(s)	14, 1781, 1782, 1958, 2844
EciI	GGCGGA	1 cut(s)	234
Ecl136II	GAGCTC	1 cut(s)	2050
Eco130I	CCWWGG	1 cut(s)	1755
Eco147I	AGGCCT	1 cut(s)	2503
Eco24I	GRGCYC	2 cut(s)	137, 2052
Eco31I	GGTCTC	2 cut(s)	522, 2998
Eco32I	GATATC	1 cut(s)	2599
Eco47I	GGWCC	5 cut(s)	221, 361, 502, 1948, 2712
Eco53kI	GAGCTC	1 cut(s)	2050
Eco57I	CTGAAG	3 cut(s)	420, 855, 1596
Eco72I	CACGTG	1 cut(s)	180
EcoICRI	GAGCTC	1 cut(s)	2050
EcoNI	CCTNNNNNAGG	1 cut(s)	128
EcoO109I	RGGNCCY	2 cut(s)	502, 1948
EcoRI	GAATTC	4 cut(s)	380, 759, 1352, 2176
EcoRII	CCWGG	7 cut(s)	283, 295, 371, 685, 979, 1524, 2267
EcoRV	GATATC	1 cut(s)	2599
EcoT14I	CCWWGG	1 cut(s)	1755
EcoT38I	GRGCYC	2 cut(s)	137, 2052
ErhI	CCWWGG	1 cut(s)	1755
Esp3I	CGTCTC	1 cut(s)	436
FaeI	CATG	9 cut(s)	242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
FalI	AAGNNNNNCTT	2 cut(s)	698, 730
FaqI	GGGAC	5 cut(s)	301, 488, 783, 1849, 2725
FatI	CATG	9 cut(s)	238, 327, 654, 1099, 1131, 1162, 1356, 2940, 3012
FauNDI	CATATG	1 cut(s)	1967
FbaI	TGATCA	3 cut(s)	1834, 1942, 2680
Fnu4HI	GCNGC	7 cut(s)	217, 518, 729, 1824, 1827, 1830, 2136
FokI	GGATG	8 cut(s)	5, 421, 1205, 1470, 1711, 2072, 2308, 2573
FriOI	GRGCYC	2 cut(s)	137, 2052
Fsp4HI	GCNGC	7 cut(s)	217, 518, 729, 1824, 1827, 1830, 2136
FspBI	CTAG	8 cut(s)	732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
GlaI	GCGC	2 cut(s)	1793, 2889
GluI	GCNGC	7 cut(s)	217, 518, 729, 1824, 1827, 1830, 2136
GsaI	CCCAGC	1 cut(s)	2110
GsuI	CTGGAG	3 cut(s)	467, 1286, 2736
HaeIII	GGCC	8 cut(s)	173, 517, 542, 979, 2104, 2298, 2503, 2930
HapII	CCGG	9 cut(s)	213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
HgaI	GACGC	1 cut(s)	341
HhaI	GCGC	2 cut(s)	1794, 2890
Hin1I	GRCGYC	1 cut(s)	333
Hin1II	CATG	9 cut(s)	242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
Hin6I	GCGC	2 cut(s)	1792, 2888
HinP1I	GCGC	2 cut(s)	1792, 2888
HindIII	AAGCTT	4 cut(s)	817, 1271, 1852, 2666
HpaII	CCGG	9 cut(s)	213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
HphI	GGTGA	6 cut(s)	35, 450, 619, 1691, 1952, 2800
Hpy166II	GTNNAC	3 cut(s)	932, 2776, 2875
Hpy8I	GTNNAC	3 cut(s)	932, 2776, 2875
Hpy99I	CGWCG	5 cut(s)	41, 101, 515, 595, 2570
HpyCH4IV	ACGT	7 cut(s)	179, 267, 590, 642, 693, 1314, 1406
HpyF10VI	GCNNNNNNNGC	9 cut(s)	193, 341, 687, 696, 741, 947, 1829, 2135, 2820
HpyF3I	CTNAG	8 cut(s)	200, 572, 755, 963, 1326, 2149, 2580, 2675
HpySE526I	ACGT	7 cut(s)	179, 267, 590, 642, 693, 1314, 1406
Hsp92I	GRCGYC	1 cut(s)	333
Hsp92II	CATG	9 cut(s)	242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
HspAI	GCGC	2 cut(s)	1792, 2888
KflI	GGGWCCC	1 cut(s)	502
Ksp22I	TGATCA	3 cut(s)	1834, 1942, 2680
LguI	GCTCTTC	1 cut(s)	1782
LmnI	GCTCC	5 cut(s)	140, 419, 2047, 2191, 2820
Lsp1109I	GCAGC	5 cut(s)	715, 1810, 1813, 1816, 2122
LweI	GCATC	5 cut(s)	435, 928, 1492, 1883, 2781
MabI	ACCWGGT	1 cut(s)	371
MaeI	CTAG	8 cut(s)	732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
MaeII	ACGT	7 cut(s)	179, 267, 590, 642, 693, 1314, 1406
MaeIII	GTNAC	9 cut(s)	241, 337, 718, 966, 1453, 1520, 1679, 2755, 3022
MflI	RGATCY	7 cut(s)	1528, 1589, 1800, 2036, 2095, 2520, 2992
MhlI	GDGCHC	4 cut(s)	137, 185, 1720, 2052
MlyI	GAGTC	7 cut(s)	389, 449, 836, 968, 974, 2141, 2686
MmeI	TCCRAC	3 cut(s)	2223, 2778, 2931
MroXI	GAANNNNTTC	1 cut(s)	1272
MseI	TTAA	7 cut(s)	747, 1062, 1113, 1139, 1403, 2316, 2900
MslI	CAYNNNNRTG	3 cut(s)	77, 973, 2734
MspI	CCGG	9 cut(s)	213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
Mva1269I	GAATGC	3 cut(s)	495, 1670, 1897
MvaI	CCWGG	7 cut(s)	285, 297, 373, 687, 981, 1526, 2269
MvnI	CGCG	1 cut(s)	2888
MwoI	GCNNNNNNNGC	9 cut(s)	193, 341, 687, 696, 741, 947, 1829, 2135, 2820
NciI	CCSGG	3 cut(s)	255, 1125, 1909
NdeI	CATATG	1 cut(s)	1967
NheI	GCTAGC	2 cut(s)	731, 2477
NlaIII	CATG	9 cut(s)	242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
NmeAIII	GCCGAG	3 cut(s)	96, 657, 2391
NmuCI	GTSAC	7 cut(s)	241, 337, 718, 966, 1453, 1520, 1679
NspI	RCATGY	1 cut(s)	1103
OliI	CACNNNNGTG	1 cut(s)	973
PagI	TCATGA	1 cut(s)	1356
PasI	CCCWGGG	1 cut(s)	284
PceI	AGGCCT	1 cut(s)	2503
PciI	ACATGT	1 cut(s)	1099
PciSI	GCTCTTC	1 cut(s)	1782
PcsI	WCGNNNNNNNCGW	3 cut(s)	36, 123, 599
PctI	GAATGC	3 cut(s)	495, 1670, 1897
PdmI	GAANNNNTTC	1 cut(s)	1272
PfeI	GAWTC	6 cut(s)	617, 1177, 1306, 1390, 1556, 2627
PflFI	GACNNNGTC	1 cut(s)	335
PflMI	CCANNNNNTGG	1 cut(s)	941
PkrI	GCNGC	7 cut(s)	218, 519, 730, 1825, 1828, 1831, 2137
PleI	GAGTC	7 cut(s)	389, 449, 836, 967, 973, 2141, 2686
PmaCI	CACGTG	1 cut(s)	180
PmlI	CACGTG	1 cut(s)	180
PpsI	GAGTC	7 cut(s)	389, 449, 836, 967, 973, 2141, 2686
Ppu21I	YACGTR	1 cut(s)	180
PpuMI	RGGWCCY	2 cut(s)	502, 1948
PscI	ACATGT	1 cut(s)	1099
PsiI	TTATAA	2 cut(s)	812, 828
Psp124BI	GAGCTC	1 cut(s)	2052
Psp1406I	AACGTT	1 cut(s)	1406
Psp5II	RGGWCCY	2 cut(s)	502, 1948
Psp6I	CCWGG	7 cut(s)	283, 295, 371, 685, 979, 1524, 2267
PspCI	CACGTG	1 cut(s)	180
PspFI	CCCAGC	1 cut(s)	2106
PspGI	CCWGG	7 cut(s)	283, 295, 371, 685, 979, 1524, 2267
PspPI	GGNCC	8 cut(s)	221, 361, 502, 515, 1948, 2103, 2296, 2712
PspPPI	RGGWCCY	2 cut(s)	502, 1948
PstNI	CAGNNNCTG	3 cut(s)	290, 941, 2759
PsuI	RGATCY	7 cut(s)	1528, 1589, 1800, 2036, 2095, 2520, 2992
PsyI	GACNNNGTC	1 cut(s)	335
RsaI	GTAC	9 cut(s)	281, 1082, 1385, 1420, 1741, 2006, 2329, 2558, 3060
RsaNI	GTAC	9 cut(s)	280, 1081, 1384, 1419, 1740, 2005, 2328, 2557, 3059
RseI	CAYNNNNRTG	3 cut(s)	77, 973, 2734
SacI	GAGCTC	1 cut(s)	2052
SapI	GCTCTTC	1 cut(s)	1782
SaqAI	TTAA	7 cut(s)	747, 1062, 1113, 1139, 1403, 2316, 2900
SatI	GCNGC	7 cut(s)	217, 518, 729, 1824, 1827, 1830, 2136
Sau96I	GGNCC	8 cut(s)	221, 361, 502, 515, 1948, 2103, 2296, 2712
SchI	GAGTC	7 cut(s)	389, 449, 836, 968, 974, 2141, 2686
SduI	GDGCHC	4 cut(s)	137, 185, 1720, 2052
SexAI	ACCWGGT	1 cut(s)	371
SfaNI	GCATC	5 cut(s)	435, 928, 1492, 1883, 2781
SfcI	CTRYAG	2 cut(s)	1185, 2358
SgrAI	CRCCGGYG	1 cut(s)	212
SinI	GGWCC	5 cut(s)	221, 361, 502, 1948, 2712
SmiMI	CAYNNNNRTG	3 cut(s)	77, 973, 2734
SmlI	CTYRAG	3 cut(s)	104, 1172, 2333
SmoI	CTYRAG	3 cut(s)	104, 1172, 2333
SpeI	ACTAGT	1 cut(s)	1517
SseBI	AGGCCT	1 cut(s)	2503
SsiI	CCGC	3 cut(s)	216, 219, 518
SspI	AATATT	1 cut(s)	1609
SspMI	CTAG	8 cut(s)	732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
SstI	GAGCTC	1 cut(s)	2052
StuI	AGGCCT	1 cut(s)	2503
StyI	CCWWGG	1 cut(s)	1755
TaiI	ACGT	7 cut(s)	182, 270, 593, 645, 696, 1317, 1409
TatI	WGTACW	3 cut(s)	1080, 1739, 2556
TauI	GCSGC	2 cut(s)	219, 520
TfiI	GAWTC	6 cut(s)	617, 1177, 1306, 1390, 1556, 2627
Tru1I	TTAA	7 cut(s)	747, 1062, 1113, 1139, 1403, 2316, 2900
Tru9I	TTAA	7 cut(s)	747, 1062, 1113, 1139, 1403, 2316, 2900
TscAI	CASTG	3 cut(s)	346, 2478, 2597
TseFI	GTSAC	7 cut(s)	241, 337, 718, 966, 1453, 1520, 1679
TseI	GCWGC	5 cut(s)	728, 1823, 1826, 1829, 2135
Tsp45I	GTSAC	7 cut(s)	241, 337, 718, 966, 1453, 1520, 1679
TspGWI	ACGGA	1 cut(s)	2533
TspRI	CASTG	3 cut(s)	346, 2478, 2597
Tth111I	GACNNNGTC	1 cut(s)	335
Van91I	CCANNNNNTGG	1 cut(s)	941
VpaK11BI	GGWCC	5 cut(s)	221, 361, 502, 1948, 2712
XagI	CCTNNNNNAGG	1 cut(s)	128
XapI	RAATTY	5 cut(s)	380, 759, 1352, 1913, 2176
XceI	RCATGY	1 cut(s)	1103
XcmI	CCANNNNNNNNNTGG	3 cut(s)	445, 1651, 2531
XmnI	GAANNNNTTC	1 cut(s)	1272
XspI	CTAG	8 cut(s)	732, 1155, 1518, 2079, 2237, 2444, 2478, 2960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.