Rmu_sc0006531.1_g000003
ERF Family

Transducin WD40 repeat-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006531.1
OG0001828
Physical Location & Seq
Reverse (-)
7081 .. 19265
12185 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3096 bp
atggttctcttcttcctcatcctcgtcctcgtcctcgtcgatcaccaaaacccccaaagatttcgactttccacaactatggcttcctccaccaccgacgacctcaagaaaaccctcggcgacctcgacaagggctcctccatatccctcctctccaagctcatcggcgaggccaacacgtgctcgcctttcttgccccttagcaccaccaccggcggcggacctttcctcatcaatcatgtgacttaccaccccggcaggggcaacgtgattgtggagtacccagggactgtgccagggaaagtgttgtcctttgtggggtgccacatggacgccgtcactgccaatcctgatgattgggtccatcttacctggtctgaattcgacagcgatgactctgaagcagtcggtggtggtggagctggcatcgtctcatccaaaaacaaaatggaagactcaccggaaatactacgaaactcactccagaactccggcattcgggtcccctacgacgggccgcctgtccgagacctcacaccggccactttagtctcaatctgtggtcaatcccttagcctcatcgccgaaacgtcgtcattttcgacctcacttcccgattcctccatcacctaccagttcaacgtctgtatggacatggcttctgggatcaacaacctcggctacccaggcaacgtgagcttccacaaggttatctttgtcacattagctgctagcctttacagctttaatcttctcagaattcaaaccaatcagaggatatgctttctgaatgtcagtcccgatgaagttataagaagcttgttttataataaaaacaatgactcacttatcacagtttcagtttatgcttcagacaatttcagttctttgaaatgtagaagcacgaggattgaatacatacgaaggggtaaaccagatgctggctttgctctttttgagtctgagtcactaaagtggcctggatttgtagagtttgatgatgtaaatgggaaggttctcacttactctgcacaagatagtatatacaaggtgtttgatcttaaaaactatacaatgttgtactccatatcagataaacatgtccaagaaattaagattagtccggggatcatgttgttaattttcaataaagctagtagccatgttcctctcaagattctttctatagaggatggtagtgttctcaaatccttcaaccatctacttcatcggaataagaaggtagatttcattgaacagttcaatgaaaagcttcttgtaaaacaagaaaatgagaacctccagattcttgacgttcgcaattctgagatgacagaagttagcaaaagtgaattcatgacaccatcggcttttatatttctgtacgagaatcagttatttttaacgtttcgtaatcgtactgtggctgtttggaactttcgaggggaacttgtgacttcgtttgaggatcatcttttgtggcatcccgactgcaatactaataacatatatattactagtgaccaggatcttattatttcttactgcaaggctgattctgatgatccattagctgaaggaaatgcaggatccatcaatatcagcaatattttgacagggaaatgccttgctaaaataaaagccagcaagaatgtggaaaatgaatgcagttgtagtggtgactgttgtggaagcagttgcagttccaagaagcgtgcccagtcatccagaattagaagtacagtcgcagaagccttggaagatattactgctctcttctacgatgaagagcgcaacgagatctatactggcaataggcttgctgctgctgctgatcaaactgcaaatataagcttggggtcgtccctaactgcatcagacaactctaaaccgtggcattctccctccggggaatttgcgtatggatttcgccggattggtgatcaggacctcttcttgcttgccatatggtatgacaagataccagaaaagactattgtttggtacgcaaatggagacaatccagcaccaaaaggatccaaagtggagctcacgaaggatggtcatttcaggctcactagccctcggaaagaagatctctggccccagcctgttattagtggagttgcttatgctgccctgcttgactcaggcaactttgttcttgcaaaccagaattcatcagctcctttatggcagagcttcaaagaccccagagacaccattttaccaaccctagtgttggaaattggagaaaagctatcttccaggcagactgccaccaactactcaaagggccagtttcaactccaatttaaaccatccggtacgcttgagctgtatctcatagccttgcctacagaagcgagtgcaatagccaagacccatcacaaaaacctcgtcagattgctcggcttttgtgatgaaggggaaaataaactcctagtctatgagtttatgagcaatggaacactggctagctttctgtttgggatttcaaggcctgattggaacaaacggatccaaattgcgtttggtattgccagagggctaatgtacttacacgacgagtgtagcactcagatcatccactgtgatatcaaaccccccaacatacttctcgatgattcatatacagcaaggatttcggatttcggattggcaaagcttctgctaagtgatcaaactctgactcatacagtcattagagggaccagagggtatgttgcaccagaatggttcagaaatactccagttactgcaaaggttgatgtttacagttatggggtgatgctgttggagattatctgttgcaggaggagcctcgaaatggaaagggaaaatgaagaagaggcgatactaactgactgggtttacgattgctacgcgcaaaggagattaaacaagatgatcgaggacgatgaggaggccagaaatgacatgaaaaggttggagaggctagtaatggtggcaatttggtgcatacaagaggatccatctttgagacccaccatgaagaaggttacacaaatgctcgaaggagtggttgatgtatctgtacctccaagtccttctccttttagttcaatttgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1031

Amino Acids

115.08

Weight (kDa)

5.43

Isoelectric Point (pI)

44.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CCDC22_N PF21674 150 - 239 1.1e-14 CCDC22 protein N-terminal domain
DUF7899 PF25463 234 - 606 3.2e-191 Domain of unknown function (DUF7899)
B_lectin PF01453 665 - 758 2.8e-15 D-mannose binding lectin
Pkinase PF00069 785 - 1010 4.7e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 786 - 1012 3.2e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 812, 828
AccB1I GGYRCC 1 cut(s) 321
AccB7I CCANNNNNTGG 1 cut(s) 941
AccII CGCG 1 cut(s) 2888
AciI CCGC 3 cut(s) 216, 219, 518
AclI AACGTT 1 cut(s) 1406
AcoI YGGCCR 1 cut(s) 540
AcsI RAATTY 5 cut(s) 380, 759, 1352, 1913, 2176
AcuI CTGAAG 3 cut(s) 420, 855, 1596
AcvI CACGTG 1 cut(s) 180
AcyI GRCGYC 1 cut(s) 333
AfaI GTAC 9 cut(s) 281, 1082, 1385, 1420, 1741, 2006, 2329, 2558, 3060
AflIII ACRYGT 2 cut(s) 177, 1099
AhlI ACTAGT 1 cut(s) 1517
AjnI CCWGG 7 cut(s) 283, 295, 371, 685, 979, 1524, 2267
AleI CACNNNNGTG 1 cut(s) 973
Alw21I GWGCWC 2 cut(s) 185, 2052
Alw26I GTCTC 6 cut(s) 436, 522, 556, 2010, 2211, 2998
AlwNI CAGNNNCTG 3 cut(s) 290, 941, 2759
AoxI GGCC 8 cut(s) 171, 515, 540, 977, 2102, 2296, 2501, 2928
ApeKI GCWGC 5 cut(s) 728, 1823, 1826, 1829, 2135
ApoI RAATTY 5 cut(s) 380, 759, 1352, 1913, 2176
ArsI GACNNNNNNTTYG 2 cut(s) 2385, 2417
Asp700I GAANNNNTTC 1 cut(s) 1272
AspLEI GCGC 2 cut(s) 1794, 2890
AspS9I GGNCC 8 cut(s) 221, 361, 502, 515, 1948, 2103, 2296, 2712
AsuC2I CCSGG 3 cut(s) 255, 1125, 1909
AsuHPI GGTGA 6 cut(s) 35, 450, 619, 1691, 1952, 2800
AsuNHI GCTAGC 2 cut(s) 731, 2477
AvaII GGWCC 5 cut(s) 221, 361, 502, 1948, 2712
BaeGI GKGCMC 1 cut(s) 1720
BamHI GGATCC 4 cut(s) 1589, 2036, 2520, 2992
BanI GGYRCC 1 cut(s) 321
BanII GRGCYC 2 cut(s) 137, 2052
BarI GAAGNNNNNNTAC 2 cut(s) 2841, 2873
BauI CACGAG 1 cut(s) 904
BbrPI CACGTG 1 cut(s) 180
BbsI GAAGAC 1 cut(s) 459
Bbv12I GWGCWC 2 cut(s) 185, 2052
BbvI GCAGC 5 cut(s) 715, 1810, 1813, 1816, 2122
BceAI ACGGC 1 cut(s) 320
BcgI CGANNNNNNTGC 2 cut(s) 2628, 2662
BciT130I CCWGG 7 cut(s) 285, 297, 373, 687, 981, 1526, 2269
BclI TGATCA 3 cut(s) 1834, 1942, 2680
BcnI CCSGG 3 cut(s) 255, 1125, 1909
BcoDI GTCTC 6 cut(s) 436, 522, 556, 2010, 2211, 2998
BcuI ACTAGT 1 cut(s) 1517
BfaI CTAG 8 cut(s) 732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
BfmI CTRYAG 2 cut(s) 1185, 2358
BglII AGATCT 2 cut(s) 1800, 2095
BisI GCNGC 7 cut(s) 217, 518, 729, 1824, 1827, 1830, 2136
BlsI GCNGC 7 cut(s) 218, 519, 730, 1825, 1828, 1831, 2137
Bme18I GGWCC 5 cut(s) 221, 361, 502, 1948, 2712
BmgT120I GGNCC 8 cut(s) 221, 361, 502, 515, 1948, 2103, 2296, 2712
BmrI ACTGGG 2 cut(s) 1714, 2878
BmsI GCATC 5 cut(s) 435, 928, 1492, 1883, 2781
BmtI GCTAGC 2 cut(s) 735, 2481
BmuI ACTGGG 2 cut(s) 1714, 2878
BpiI GAAGAC 1 cut(s) 459
BpmI CTGGAG 3 cut(s) 467, 1286, 2736
Bpu10I CCTNAGC 2 cut(s) 200, 572
BpuEI CTTGAG 3 cut(s) 89, 1157, 2354
BpuMI CCSGG 3 cut(s) 255, 1125, 1909
BsaAI YACGTR 1 cut(s) 180
BsaHI GRCGYC 1 cut(s) 333
BsaI GGTCTC 2 cut(s) 522, 2998
BsaWI WCCGGW 2 cut(s) 460, 2324
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bse118I RCCGGY 2 cut(s) 212, 538
Bse1I ACTGG 7 cut(s) 634, 1720, 1813, 2299, 2478, 2753, 2873
Bse3DI GCAATG 1 cut(s) 2470
BseBI CCWGG 7 cut(s) 285, 297, 373, 687, 981, 1526, 2269
BseGI GGATG 8 cut(s) 18, 434, 1198, 1483, 1724, 2065, 2321, 2586
BseMI GCAATG 1 cut(s) 2470
BseMII CTCAG 5 cut(s) 769, 954, 1317, 2163, 2594
BseNI ACTGG 7 cut(s) 634, 1720, 1813, 2299, 2478, 2753, 2873
BseRI GAGGAG 4 cut(s) 127, 140, 2833, 2939
BseSI GKGCMC 1 cut(s) 1720
BseXI GCAGC 5 cut(s) 715, 1810, 1813, 1816, 2122
BseYI CCCAGC 1 cut(s) 2106
BsgI GTGCAG 1 cut(s) 1014
Bsh1236I CGCG 1 cut(s) 2888
BshFI GGCC 8 cut(s) 173, 517, 542, 979, 2104, 2298, 2503, 2930
BshNI GGYRCC 1 cut(s) 321
BsiHKAI GWGCWC 2 cut(s) 185, 2052
BsiSI CCGG 9 cut(s) 213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
BslFI GGGAC 5 cut(s) 301, 488, 783, 1849, 2725
BsmAI GTCTC 6 cut(s) 436, 522, 556, 2010, 2211, 2998
BsmBI CGTCTC 1 cut(s) 436
BsmFI GGGAC 5 cut(s) 301, 488, 783, 1849, 2725
BsmI GAATGC 3 cut(s) 495, 1670, 1897
BsnI GGCC 8 cut(s) 173, 517, 542, 979, 2104, 2298, 2503, 2930
Bso31I GGTCTC 2 cut(s) 522, 2998
Bsp1286I GDGCHC 4 cut(s) 137, 185, 1720, 2052
BspACI CCGC 3 cut(s) 216, 219, 518
BspANI GGCC 8 cut(s) 173, 517, 542, 979, 2104, 2298, 2503, 2930
BspCNI CTCAG 5 cut(s) 768, 955, 1318, 2162, 2593
BspFNI CGCG 1 cut(s) 2888
BspHI TCATGA 1 cut(s) 1356
BspOI GCTAGC 2 cut(s) 735, 2481
BspQI GCTCTTC 1 cut(s) 1782
BspT107I GGYRCC 1 cut(s) 321
BspTNI GGTCTC 2 cut(s) 522, 2998
BsrDI GCAATG 1 cut(s) 2470
BsrFI RCCGGY 2 cut(s) 212, 538
BsrI ACTGG 7 cut(s) 634, 1720, 1813, 2299, 2478, 2753, 2873
BssAI RCCGGY 2 cut(s) 212, 538
BssNI GRCGYC 1 cut(s) 333
BssSI CACGAG 1 cut(s) 904
BssT1I CCWWGG 1 cut(s) 1755
Bst2BI CACGAG 1 cut(s) 904
Bst2UI CCWGG 7 cut(s) 285, 297, 373, 687, 981, 1526, 2269
Bst6I CTCTTC 5 cut(s) 14, 1781, 1782, 1958, 2844
BstACI GRCGYC 1 cut(s) 333
BstBAI YACGTR 1 cut(s) 180
BstC8I GCNNGC 9 cut(s) 185, 424, 733, 943, 1645, 1716, 1821, 1962, 2479
BstDEI CTNAG 8 cut(s) 200, 572, 755, 963, 1326, 2149, 2580, 2675
BstDSI CCRYGG 1 cut(s) 1892
BstENI CCTNNNNNAGG 1 cut(s) 128
BstF5I GGATG 8 cut(s) 18, 434, 1198, 1483, 1724, 2065, 2321, 2586
BstFNI CGCG 1 cut(s) 2888
BstHHI GCGC 2 cut(s) 1794, 2890
BstMAI GTCTC 6 cut(s) 436, 522, 556, 2010, 2211, 2998
BstMWI GCNNNNNNNGC 9 cut(s) 193, 341, 687, 696, 741, 947, 1829, 2135, 2820
BstNI CCWGG 7 cut(s) 285, 297, 373, 687, 981, 1526, 2269
BstNSI RCATGY 1 cut(s) 1103
BstSFI CTRYAG 2 cut(s) 1185, 2358
BstSLI GKGCMC 1 cut(s) 1720
BstUI CGCG 1 cut(s) 2888
BstV1I GCAGC 5 cut(s) 715, 1810, 1813, 1816, 2122
BstV2I GAAGAC 1 cut(s) 459
BstX2I RGATCY 7 cut(s) 1528, 1589, 1800, 2036, 2095, 2520, 2992
BstXI CCANNNNNNTGG 1 cut(s) 79
BstYI RGATCY 7 cut(s) 1528, 1589, 1800, 2036, 2095, 2520, 2992
BsuRI GGCC 8 cut(s) 173, 517, 542, 979, 2104, 2298, 2503, 2930
BtgI CCRYGG 1 cut(s) 1892
BtgZI GCGATG 2 cut(s) 405, 565
BtsCI GGATG 8 cut(s) 18, 434, 1198, 1483, 1724, 2065, 2321, 2586
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 3 cut(s) 339, 2471, 2590
Cac8I GCNNGC 9 cut(s) 185, 424, 733, 943, 1645, 1716, 1821, 1962, 2479
CaiI CAGNNNCTG 3 cut(s) 290, 941, 2759
CciI TCATGA 1 cut(s) 1356
CfoI GCGC 2 cut(s) 1794, 2890
Cfr10I RCCGGY 2 cut(s) 212, 538
Cfr13I GGNCC 8 cut(s) 221, 361, 502, 515, 1948, 2103, 2296, 2712
CseI GACGC 1 cut(s) 341
CsiI ACCWGGT 1 cut(s) 371
Csp6I GTAC 9 cut(s) 280, 1081, 1384, 1419, 1740, 2005, 2328, 2557, 3059
CviAII CATG 9 cut(s) 239, 328, 655, 1100, 1132, 1163, 1357, 2941, 3013
CviQI GTAC 9 cut(s) 280, 1081, 1384, 1419, 1740, 2005, 2328, 2557, 3059
DdeI CTNAG 8 cut(s) 200, 572, 755, 963, 1326, 2149, 2580, 2675
DraI TTTAAA 1 cut(s) 2317
EaeI YGGCCR 1 cut(s) 540
Eam1104I CTCTTC 5 cut(s) 14, 1781, 1782, 1958, 2844
EarI CTCTTC 5 cut(s) 14, 1781, 1782, 1958, 2844
EciI GGCGGA 1 cut(s) 234
Ecl136II GAGCTC 1 cut(s) 2050
Eco130I CCWWGG 1 cut(s) 1755
Eco147I AGGCCT 1 cut(s) 2503
Eco24I GRGCYC 2 cut(s) 137, 2052
Eco31I GGTCTC 2 cut(s) 522, 2998
Eco32I GATATC 1 cut(s) 2599
Eco47I GGWCC 5 cut(s) 221, 361, 502, 1948, 2712
Eco53kI GAGCTC 1 cut(s) 2050
Eco57I CTGAAG 3 cut(s) 420, 855, 1596
Eco72I CACGTG 1 cut(s) 180
EcoICRI GAGCTC 1 cut(s) 2050
EcoNI CCTNNNNNAGG 1 cut(s) 128
EcoO109I RGGNCCY 2 cut(s) 502, 1948
EcoRI GAATTC 4 cut(s) 380, 759, 1352, 2176
EcoRII CCWGG 7 cut(s) 283, 295, 371, 685, 979, 1524, 2267
EcoRV GATATC 1 cut(s) 2599
EcoT14I CCWWGG 1 cut(s) 1755
EcoT38I GRGCYC 2 cut(s) 137, 2052
ErhI CCWWGG 1 cut(s) 1755
Esp3I CGTCTC 1 cut(s) 436
FaeI CATG 9 cut(s) 242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
FalI AAGNNNNNCTT 2 cut(s) 698, 730
FaqI GGGAC 5 cut(s) 301, 488, 783, 1849, 2725
FatI CATG 9 cut(s) 238, 327, 654, 1099, 1131, 1162, 1356, 2940, 3012
FauNDI CATATG 1 cut(s) 1967
FbaI TGATCA 3 cut(s) 1834, 1942, 2680
Fnu4HI GCNGC 7 cut(s) 217, 518, 729, 1824, 1827, 1830, 2136
FokI GGATG 8 cut(s) 5, 421, 1205, 1470, 1711, 2072, 2308, 2573
FriOI GRGCYC 2 cut(s) 137, 2052
Fsp4HI GCNGC 7 cut(s) 217, 518, 729, 1824, 1827, 1830, 2136
FspBI CTAG 8 cut(s) 732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
GlaI GCGC 2 cut(s) 1793, 2889
GluI GCNGC 7 cut(s) 217, 518, 729, 1824, 1827, 1830, 2136
GsaI CCCAGC 1 cut(s) 2110
GsuI CTGGAG 3 cut(s) 467, 1286, 2736
HaeIII GGCC 8 cut(s) 173, 517, 542, 979, 2104, 2298, 2503, 2930
HapII CCGG 9 cut(s) 213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
HgaI GACGC 1 cut(s) 341
HhaI GCGC 2 cut(s) 1794, 2890
Hin1I GRCGYC 1 cut(s) 333
Hin1II CATG 9 cut(s) 242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
Hin6I GCGC 2 cut(s) 1792, 2888
HinP1I GCGC 2 cut(s) 1792, 2888
HindIII AAGCTT 4 cut(s) 817, 1271, 1852, 2666
HpaII CCGG 9 cut(s) 213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
HphI GGTGA 6 cut(s) 35, 450, 619, 1691, 1952, 2800
Hpy166II GTNNAC 3 cut(s) 932, 2776, 2875
Hpy8I GTNNAC 3 cut(s) 932, 2776, 2875
Hpy99I CGWCG 5 cut(s) 41, 101, 515, 595, 2570
HpyCH4IV ACGT 7 cut(s) 179, 267, 590, 642, 693, 1314, 1406
HpyF10VI GCNNNNNNNGC 9 cut(s) 193, 341, 687, 696, 741, 947, 1829, 2135, 2820
HpyF3I CTNAG 8 cut(s) 200, 572, 755, 963, 1326, 2149, 2580, 2675
HpySE526I ACGT 7 cut(s) 179, 267, 590, 642, 693, 1314, 1406
Hsp92I GRCGYC 1 cut(s) 333
Hsp92II CATG 9 cut(s) 242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
HspAI GCGC 2 cut(s) 1792, 2888
KflI GGGWCCC 1 cut(s) 502
Ksp22I TGATCA 3 cut(s) 1834, 1942, 2680
LguI GCTCTTC 1 cut(s) 1782
LmnI GCTCC 5 cut(s) 140, 419, 2047, 2191, 2820
Lsp1109I GCAGC 5 cut(s) 715, 1810, 1813, 1816, 2122
LweI GCATC 5 cut(s) 435, 928, 1492, 1883, 2781
MabI ACCWGGT 1 cut(s) 371
MaeI CTAG 8 cut(s) 732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
MaeII ACGT 7 cut(s) 179, 267, 590, 642, 693, 1314, 1406
MaeIII GTNAC 9 cut(s) 241, 337, 718, 966, 1453, 1520, 1679, 2755, 3022
MflI RGATCY 7 cut(s) 1528, 1589, 1800, 2036, 2095, 2520, 2992
MhlI GDGCHC 4 cut(s) 137, 185, 1720, 2052
MlyI GAGTC 7 cut(s) 389, 449, 836, 968, 974, 2141, 2686
MmeI TCCRAC 3 cut(s) 2223, 2778, 2931
MroXI GAANNNNTTC 1 cut(s) 1272
MseI TTAA 7 cut(s) 747, 1062, 1113, 1139, 1403, 2316, 2900
MslI CAYNNNNRTG 3 cut(s) 77, 973, 2734
MspI CCGG 9 cut(s) 213, 255, 461, 492, 539, 1124, 1908, 1933, 2325
Mva1269I GAATGC 3 cut(s) 495, 1670, 1897
MvaI CCWGG 7 cut(s) 285, 297, 373, 687, 981, 1526, 2269
MvnI CGCG 1 cut(s) 2888
MwoI GCNNNNNNNGC 9 cut(s) 193, 341, 687, 696, 741, 947, 1829, 2135, 2820
NciI CCSGG 3 cut(s) 255, 1125, 1909
NdeI CATATG 1 cut(s) 1967
NheI GCTAGC 2 cut(s) 731, 2477
NlaIII CATG 9 cut(s) 242, 331, 658, 1103, 1135, 1166, 1360, 2944, 3016
NmeAIII GCCGAG 3 cut(s) 96, 657, 2391
NmuCI GTSAC 7 cut(s) 241, 337, 718, 966, 1453, 1520, 1679
NspI RCATGY 1 cut(s) 1103
OliI CACNNNNGTG 1 cut(s) 973
PagI TCATGA 1 cut(s) 1356
PasI CCCWGGG 1 cut(s) 284
PceI AGGCCT 1 cut(s) 2503
PciI ACATGT 1 cut(s) 1099
PciSI GCTCTTC 1 cut(s) 1782
PcsI WCGNNNNNNNCGW 3 cut(s) 36, 123, 599
PctI GAATGC 3 cut(s) 495, 1670, 1897
PdmI GAANNNNTTC 1 cut(s) 1272
PfeI GAWTC 6 cut(s) 617, 1177, 1306, 1390, 1556, 2627
PflFI GACNNNGTC 1 cut(s) 335
PflMI CCANNNNNTGG 1 cut(s) 941
PkrI GCNGC 7 cut(s) 218, 519, 730, 1825, 1828, 1831, 2137
PleI GAGTC 7 cut(s) 389, 449, 836, 967, 973, 2141, 2686
PmaCI CACGTG 1 cut(s) 180
PmlI CACGTG 1 cut(s) 180
PpsI GAGTC 7 cut(s) 389, 449, 836, 967, 973, 2141, 2686
Ppu21I YACGTR 1 cut(s) 180
PpuMI RGGWCCY 2 cut(s) 502, 1948
PscI ACATGT 1 cut(s) 1099
PsiI TTATAA 2 cut(s) 812, 828
Psp124BI GAGCTC 1 cut(s) 2052
Psp1406I AACGTT 1 cut(s) 1406
Psp5II RGGWCCY 2 cut(s) 502, 1948
Psp6I CCWGG 7 cut(s) 283, 295, 371, 685, 979, 1524, 2267
PspCI CACGTG 1 cut(s) 180
PspFI CCCAGC 1 cut(s) 2106
PspGI CCWGG 7 cut(s) 283, 295, 371, 685, 979, 1524, 2267
PspPI GGNCC 8 cut(s) 221, 361, 502, 515, 1948, 2103, 2296, 2712
PspPPI RGGWCCY 2 cut(s) 502, 1948
PstNI CAGNNNCTG 3 cut(s) 290, 941, 2759
PsuI RGATCY 7 cut(s) 1528, 1589, 1800, 2036, 2095, 2520, 2992
PsyI GACNNNGTC 1 cut(s) 335
RsaI GTAC 9 cut(s) 281, 1082, 1385, 1420, 1741, 2006, 2329, 2558, 3060
RsaNI GTAC 9 cut(s) 280, 1081, 1384, 1419, 1740, 2005, 2328, 2557, 3059
RseI CAYNNNNRTG 3 cut(s) 77, 973, 2734
SacI GAGCTC 1 cut(s) 2052
SapI GCTCTTC 1 cut(s) 1782
SaqAI TTAA 7 cut(s) 747, 1062, 1113, 1139, 1403, 2316, 2900
SatI GCNGC 7 cut(s) 217, 518, 729, 1824, 1827, 1830, 2136
Sau96I GGNCC 8 cut(s) 221, 361, 502, 515, 1948, 2103, 2296, 2712
SchI GAGTC 7 cut(s) 389, 449, 836, 968, 974, 2141, 2686
SduI GDGCHC 4 cut(s) 137, 185, 1720, 2052
SexAI ACCWGGT 1 cut(s) 371
SfaNI GCATC 5 cut(s) 435, 928, 1492, 1883, 2781
SfcI CTRYAG 2 cut(s) 1185, 2358
SgrAI CRCCGGYG 1 cut(s) 212
SinI GGWCC 5 cut(s) 221, 361, 502, 1948, 2712
SmiMI CAYNNNNRTG 3 cut(s) 77, 973, 2734
SmlI CTYRAG 3 cut(s) 104, 1172, 2333
SmoI CTYRAG 3 cut(s) 104, 1172, 2333
SpeI ACTAGT 1 cut(s) 1517
SseBI AGGCCT 1 cut(s) 2503
SsiI CCGC 3 cut(s) 216, 219, 518
SspI AATATT 1 cut(s) 1609
SspMI CTAG 8 cut(s) 732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
SstI GAGCTC 1 cut(s) 2052
StuI AGGCCT 1 cut(s) 2503
StyI CCWWGG 1 cut(s) 1755
TaiI ACGT 7 cut(s) 182, 270, 593, 645, 696, 1317, 1409
TatI WGTACW 3 cut(s) 1080, 1739, 2556
TauI GCSGC 2 cut(s) 219, 520
TfiI GAWTC 6 cut(s) 617, 1177, 1306, 1390, 1556, 2627
Tru1I TTAA 7 cut(s) 747, 1062, 1113, 1139, 1403, 2316, 2900
Tru9I TTAA 7 cut(s) 747, 1062, 1113, 1139, 1403, 2316, 2900
TscAI CASTG 3 cut(s) 346, 2478, 2597
TseFI GTSAC 7 cut(s) 241, 337, 718, 966, 1453, 1520, 1679
TseI GCWGC 5 cut(s) 728, 1823, 1826, 1829, 2135
Tsp45I GTSAC 7 cut(s) 241, 337, 718, 966, 1453, 1520, 1679
TspGWI ACGGA 1 cut(s) 2533
TspRI CASTG 3 cut(s) 346, 2478, 2597
Tth111I GACNNNGTC 1 cut(s) 335
Van91I CCANNNNNTGG 1 cut(s) 941
VpaK11BI GGWCC 5 cut(s) 221, 361, 502, 1948, 2712
XagI CCTNNNNNAGG 1 cut(s) 128
XapI RAATTY 5 cut(s) 380, 759, 1352, 1913, 2176
XceI RCATGY 1 cut(s) 1103
XcmI CCANNNNNNNNNTGG 3 cut(s) 445, 1651, 2531
XmnI GAANNNNTTC 1 cut(s) 1272
XspI CTAG 8 cut(s) 732, 1155, 1518, 2079, 2237, 2444, 2478, 2960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.