Rmu_sc0011454.1_g000003

Endo-1,3(4)-beta-glucanase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011454.1
Physical Location & Seq
Reverse (-)
9217 .. 13555
4339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011454.1_g000003.1.cds

Sequence Viewer

Length: 1641 bp
atgcccttccctcaggaccgcctggacctccctctcgacgccctcatcgccgaatccaagcaacaacgccgtcacaacaaccaggctcaccacccacgagggcataccggtcatttcggcggcagaggccgcggaggctccacctcagtccccgctcgtcggccgatgaaccacaacgcctacagaacggggccgtatcccactctgccggaaatgcaaggacagcctggacccagaaggattgagctgccattggctttgagccaagcgatgaacagagaggaaagcaccaagctttatatatctaacttggactatggtgttaccaatagagatatagagaaggtttgcattgcttctgttcagggaacagctgaagttgtctataagcaccattcagatgctctagcagcaatcgagagatataacaatcagcatcttgatggaaagaaagtggaaattaagcttgtgggactcaatgttgtttctcctgttcctctgcttctgcctccaaatacaaatttcttgcaagaacatccaagtcccatcttccagaggctaggaagagttggttcaaggagatcgtttcatggtcatggtggtgttgaacttgaaagaggccgtggacgggtgagaaatggtggcccgaaggttactacagaatctcagcaatggaagaatgtgactccagaatctcagcaatggaagaatgtgactccagaatctcagcaaaggaagaatgtgactgcagaaaatcagcaaaggaagaatgtgactgcagaaaatcagcaaaggaagaatgtgattacagaatctattaacaggaagaaaactttttatggagatacaactgtgacttttgaagatctggatgctgatttggagaaatatcgcctaaaaggcactcagactcctccatcagtgacgatgatatatccctcccacgtcatctcagccttcgatgacctcagcatcacccttgacttcccatcctccaatctcacattccctctcgtccggggaagctcatatctcacattctctgtttcgaaccagacctcaatatcactctcaaccatccacgccattctatctttctcttcgaatcaagatcacaccaagcacaccatcaagctcaataacgatcagacatggctggtctacacctcttcgccgatccatttgactaaccacaacttgtctgtgattacctcttctgggttatccggcattgtgagagttgcagtgctgccggacccagaatccgaggctgcccttgatcagttcagctctcgctacccattttcgggtgaggctgtgttcggagatgggtttaatttggagtataagtgggaagcaaaagggtctggggatttgcttatgctggctcatcctctacatgtgaaccttcttaagaatgatgacaatgtggcttttttggagggtgttaagtataggaacattgatggtgagcttgttggtgttgtaggggactcatgggtgctgaggctagagcctgtttcggttacttgccattcgattaatgatgttaaggaagagtcgaaaagtaagatcatggctgcattgtgcaaagttgtggagggtttgattttgacaccagctgcgacagagcgtgaatga

Protein Analysis

546

Amino Acids

60.74

Weight (kDa)

8.25

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 155
AccI GTMKAC 1 cut(s) 1161
AccII CGCG 1 cut(s) 132
AciI CCGC 5 cut(s) 19, 120, 130, 132, 153
AclWI GGATC 1 cut(s) 1171
AcoI YGGCCR 1 cut(s) 161
AcsI RAATTY 1 cut(s) 520
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 39
AfiI CCNNNNNNNGG 5 cut(s) 159, 628, 1218, 1306, 1307
AflII CTTAAG 1 cut(s) 1412
AflIII ACRYGT 1 cut(s) 1399
AgeI ACCGGT 1 cut(s) 107
AgsI TTSAA 4 cut(s) 576, 608, 614, 863
AjiI CACGTC 1 cut(s) 946
AjnI CCWGG 3 cut(s) 21, 81, 226
AjuI GAANNNNNNNTTGG 2 cut(s) 989, 1021
AluBI AGCT 9 cut(s) 247, 295, 374, 466, 1026, 1135, 1290, 1474, 1622
AluI AGCT 9 cut(s) 247, 295, 374, 466, 1026, 1135, 1290, 1474, 1622
AlwI GGATC 1 cut(s) 1171
AoxI GGCC 5 cut(s) 127, 161, 191, 619, 643
ApeKI GCWGC 6 cut(s) 247, 410, 1249, 1271, 1580, 1622
ApoI RAATTY 1 cut(s) 520
AseI ATTAAT 1 cut(s) 1542
AsiGI ACCGGT 1 cut(s) 107
AspS9I GGNCC 6 cut(s) 16, 25, 191, 230, 644, 1255
AsuC2I CCSGG 1 cut(s) 1019
AsuHPI GGTGA 5 cut(s) 80, 643, 967, 1322, 1481
AsuII TTCGAA 2 cut(s) 1049, 1103
AvaII GGWCC 4 cut(s) 16, 25, 230, 1255
AxyI CCTNAGG 1 cut(s) 12
BaeI ACNNNNGTAYC 2 cut(s) 837, 870
BauI CACGAG 1 cut(s) 96
BbvCI CCTCAGC 2 cut(s) 968, 1505
BbvI GCAGC 6 cut(s) 234, 422, 1236, 1258, 1567, 1609
BccI CCATC 8 cut(s) 437, 554, 925, 997, 1085, 1136, 1322, 1460
BceAI ACGGC 3 cut(s) 54, 178, 606
BciT130I CCWGG 3 cut(s) 23, 83, 228
BciVI GTATCC 1 cut(s) 207
BclI TGATCA 1 cut(s) 1279
BcnI CCSGG 1 cut(s) 1019
BfaI CTAG 3 cut(s) 407, 560, 1511
BfmI CTRYAG 4 cut(s) 181, 657, 747, 777
BfrI CTTAAG 1 cut(s) 1412
BfuI GTATCC 1 cut(s) 207
BglI GCCNNNNNGGC 2 cut(s) 135, 900
BglII AGATCT 1 cut(s) 865
BisI GCNGC 8 cut(s) 121, 130, 248, 411, 1250, 1272, 1581, 1623
BlsI GCNGC 8 cut(s) 122, 131, 249, 412, 1251, 1273, 1582, 1624
Bme1390I CCNGG 4 cut(s) 23, 83, 228, 1019
Bme18I GGWCC 4 cut(s) 16, 25, 230, 1255
BmgBI CACGTC 1 cut(s) 946
BmgT120I GGNCC 6 cut(s) 16, 25, 191, 230, 644, 1255
BmiI GGNNCC 4 cut(s) 139, 192, 232, 1257
BmrFI CCNGG 4 cut(s) 23, 83, 228, 1019
BmsI GCATC 4 cut(s) 391, 445, 862, 981
BpmI CTGGAG 2 cut(s) 672, 702
Bpu10I CCTNAGC 2 cut(s) 968, 1505
Bpu14I TTCGAA 2 cut(s) 1049, 1103
BpuMI CCSGG 1 cut(s) 1019
BsaHI GRCGYC 1 cut(s) 39
BsaJI CCNNGG 4 cut(s) 130, 622, 1018, 1266
BsaWI WCCGGW 1 cut(s) 107
BsaXI ACNNNNNCTCC 4 cut(s) 895, 925, 1334, 1364
Bsc4I CCNNNNNNNGG 5 cut(s) 159, 628, 1218, 1306, 1307
Bse118I RCCGGY 1 cut(s) 107
Bse21I CCTNAGG 1 cut(s) 12
Bse3DI GCAATG 3 cut(s) 351, 677, 707
BseBI CCWGG 3 cut(s) 23, 83, 228
BseDI CCNNGG 4 cut(s) 130, 622, 1018, 1266
BseGI GGATG 5 cut(s) 535, 877, 989, 1077, 1390
BseLI CCNNNNNNNGG 5 cut(s) 159, 628, 1218, 1306, 1307
BseMI GCAATG 3 cut(s) 351, 677, 707
BseMII CTCAG 9 cut(s) 26, 159, 680, 710, 740, 920, 966, 982, 1496
BseRI GAGGAG 1 cut(s) 903
BseX3I CGGCCG 1 cut(s) 161
BseXI GCAGC 6 cut(s) 234, 422, 1236, 1258, 1567, 1609
Bsh1236I CGCG 1 cut(s) 132
Bsh1285I CGRYCG 1 cut(s) 164
BshFI GGCC 5 cut(s) 129, 163, 193, 621, 645
BshTI ACCGGT 1 cut(s) 107
BsiEI CGRYCG 1 cut(s) 164
BsiSI CCGG 5 cut(s) 108, 209, 1018, 1227, 1253
BslFI GGGAC 4 cut(s) 134, 486, 528, 1505
BslI CCNNNNNNNGG 5 cut(s) 159, 628, 1218, 1306, 1307
BsmFI GGGAC 4 cut(s) 134, 486, 528, 1505
BsnI GGCC 5 cut(s) 129, 163, 193, 621, 645
Bsp119I TTCGAA 2 cut(s) 1049, 1103
Bsp143I GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
BspACI CCGC 5 cut(s) 19, 120, 130, 132, 153
BspANI GGCC 5 cut(s) 129, 163, 193, 621, 645
BspCNI CTCAG 9 cut(s) 25, 158, 679, 709, 739, 919, 965, 981, 1497
BspFNI CGCG 1 cut(s) 132
BspLI GGNNCC 4 cut(s) 139, 192, 232, 1257
BspMAI CTGCAG 2 cut(s) 751, 781
BspPI GGATC 1 cut(s) 1171
BspT104I TTCGAA 2 cut(s) 1049, 1103
BspTI CTTAAG 1 cut(s) 1412
BsrBI CCGCTC 1 cut(s) 155
BsrDI GCAATG 3 cut(s) 351, 677, 707
BsrFI RCCGGY 1 cut(s) 107
BssAI RCCGGY 1 cut(s) 107
BssECI CCNNGG 4 cut(s) 130, 622, 1018, 1266
BssMI GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
BssNI GRCGYC 1 cut(s) 39
BssSI CACGAG 1 cut(s) 96
Bst2BI CACGAG 1 cut(s) 96
Bst2UI CCWGG 3 cut(s) 23, 83, 228
Bst4CI ACNGT 1 cut(s) 853
Bst6I CTCTTC 5 cut(s) 559, 1105, 1174, 1219, 1551
BstACI GRCGYC 1 cut(s) 39
BstAFI CTTAAG 1 cut(s) 1412
BstBI TTCGAA 2 cut(s) 1049, 1103
BstC8I GCNNGC 1 cut(s) 1386
BstDEI CTNAG 9 cut(s) 12, 145, 666, 696, 726, 906, 952, 968, 1505
BstDSI CCRYGG 2 cut(s) 130, 622
BstF5I GGATG 5 cut(s) 535, 877, 989, 1077, 1390
BstFNI CGCG 1 cut(s) 132
BstKTI GATC 7 cut(s) 584, 868, 1114, 1147, 1179, 1282, 1575
BstMBI GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
BstMCI CGRYCG 1 cut(s) 164
BstMWI GCNNNNNNNGC 8 cut(s) 47, 126, 129, 135, 214, 223, 410, 900
BstNI CCWGG 3 cut(s) 23, 83, 228
BstNSI RCATGY 1 cut(s) 1403
BstSCI CCNGG 4 cut(s) 21, 81, 226, 1017
BstSFI CTRYAG 4 cut(s) 181, 657, 747, 777
BstUI CGCG 1 cut(s) 132
BstV1I GCAGC 6 cut(s) 234, 422, 1236, 1258, 1567, 1609
BstX2I RGATCY 1 cut(s) 865
BstYI RGATCY 1 cut(s) 865
BstZI CGGCCG 1 cut(s) 161
Bsu36I CCTNAGG 1 cut(s) 12
BsuI GTATCC 1 cut(s) 207
BsuRI GGCC 5 cut(s) 129, 163, 193, 621, 645
BtgI CCRYGG 2 cut(s) 130, 622
BtgZI GCGATG 2 cut(s) 31, 284
BtrI CACGTC 1 cut(s) 946
BtsCI GGATG 5 cut(s) 535, 877, 989, 1077, 1390
BtsI GCAGTG 1 cut(s) 1251
BtsIMutI CAGTG 2 cut(s) 927, 1251
Cac8I GCNNGC 1 cut(s) 1386
Cfr10I RCCGGY 1 cut(s) 107
Cfr13I GGNCC 6 cut(s) 16, 25, 191, 230, 644, 1255
Cfr42I CCGCGG 1 cut(s) 133
CseI GACGC 1 cut(s) 47
CspAI ACCGGT 1 cut(s) 107
CviAII CATG 6 cut(s) 590, 596, 1152, 1400, 1497, 1576
DdeI CTNAG 9 cut(s) 12, 145, 666, 696, 726, 906, 952, 968, 1505
DpnI GATC 7 cut(s) 583, 867, 1113, 1146, 1178, 1281, 1574
DpnII GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
EaeI YGGCCR 1 cut(s) 161
EagI CGGCCG 1 cut(s) 161
Eam1104I CTCTTC 5 cut(s) 559, 1105, 1174, 1219, 1551
EarI CTCTTC 5 cut(s) 559, 1105, 1174, 1219, 1551
EclXI CGGCCG 1 cut(s) 161
Eco47I GGWCC 4 cut(s) 16, 25, 230, 1255
Eco52I CGGCCG 1 cut(s) 161
Eco57I CTGAAG 1 cut(s) 396
Eco81I CCTNAGG 1 cut(s) 12
EcoRII CCWGG 3 cut(s) 21, 81, 226
FaeI CATG 6 cut(s) 593, 599, 1155, 1403, 1500, 1579
FaqI GGGAC 4 cut(s) 134, 486, 528, 1505
FatI CATG 6 cut(s) 589, 595, 1151, 1399, 1496, 1575
FauI CCCGC 1 cut(s) 160
FbaI TGATCA 1 cut(s) 1279
FblI GTMKAC 1 cut(s) 1161
Fnu4HI GCNGC 8 cut(s) 121, 130, 248, 411, 1250, 1272, 1581, 1623
FokI GGATG 5 cut(s) 522, 884, 976, 1064, 1377
Fsp4HI GCNGC 8 cut(s) 121, 130, 248, 411, 1250, 1272, 1581, 1623
FspBI CTAG 3 cut(s) 407, 560, 1511
GluI GCNGC 8 cut(s) 121, 130, 248, 411, 1250, 1272, 1581, 1623
GsuI CTGGAG 2 cut(s) 672, 702
HaeIII GGCC 5 cut(s) 129, 163, 193, 621, 645
HapII CCGG 5 cut(s) 108, 209, 1018, 1227, 1253
HgaI GACGC 1 cut(s) 47
Hin1I GRCGYC 1 cut(s) 39
Hin1II CATG 6 cut(s) 593, 599, 1155, 1403, 1500, 1579
HindIII AAGCTT 2 cut(s) 293, 464
HpaII CCGG 5 cut(s) 108, 209, 1018, 1227, 1253
HphI GGTGA 5 cut(s) 80, 643, 967, 1322, 1481
Hpy166II GTNNAC 3 cut(s) 626, 1162, 1405
Hpy188I TCNGA 5 cut(s) 400, 909, 1149, 1267, 1325
Hpy188III TCNNGA 9 cut(s) 14, 35, 418, 440, 553, 689, 719, 869, 1109
Hpy8I GTNNAC 3 cut(s) 626, 1162, 1405
Hpy99I CGWCG 2 cut(s) 41, 162
HpyAV CCTTC 6 cut(s) 16, 231, 337, 643, 967, 1418
HpyCH4III ACNGT 1 cut(s) 853
HpyCH4IV ACGT 1 cut(s) 945
HpyCH4V TGCA 8 cut(s) 217, 351, 529, 749, 779, 1244, 1583, 1590
HpyF10VI GCNNNNNNNGC 8 cut(s) 47, 126, 129, 135, 214, 223, 410, 900
HpyF3I CTNAG 9 cut(s) 12, 145, 666, 696, 726, 906, 952, 968, 1505
HpySE526I ACGT 1 cut(s) 945
Hsp92I GRCGYC 1 cut(s) 39
Hsp92II CATG 6 cut(s) 593, 599, 1155, 1403, 1500, 1579
Ksp22I TGATCA 1 cut(s) 1279
KspI CCGCGG 1 cut(s) 133
Kzo9I GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
LmnI GCTCC 1 cut(s) 143
Lsp1109I GCAGC 6 cut(s) 234, 422, 1236, 1258, 1567, 1609
LweI GCATC 4 cut(s) 391, 445, 862, 981
MaeI CTAG 3 cut(s) 407, 560, 1511
MaeII ACGT 1 cut(s) 945
MalI GATC 7 cut(s) 583, 867, 1113, 1146, 1178, 1281, 1574
MbiI CCGCTC 1 cut(s) 155
MboI GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
MflI RGATCY 1 cut(s) 865
MluCI AATT 3 cut(s) 459, 520, 1336
MlyI GAGTC 6 cut(s) 468, 679, 709, 904, 1487, 1568
MseI TTAA 7 cut(s) 462, 819, 1335, 1413, 1449, 1542, 1551
MslI CAYNNNNRTG 4 cut(s) 399, 441, 594, 600
MspA1I CMGCKG 3 cut(s) 132, 374, 1622
MspCI CTTAAG 1 cut(s) 1412
MspI CCGG 5 cut(s) 108, 209, 1018, 1227, 1253
MspR9I CCNGG 4 cut(s) 23, 83, 228, 1019
MvaI CCWGG 3 cut(s) 23, 83, 228
MvnI CGCG 1 cut(s) 132
MwoI GCNNNNNNNGC 8 cut(s) 47, 126, 129, 135, 214, 223, 410, 900
NciI CCSGG 1 cut(s) 1019
NdeII GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
NlaIII CATG 6 cut(s) 593, 599, 1155, 1403, 1500, 1579
NlaIV GGNNCC 4 cut(s) 139, 192, 232, 1257
NmuCI GTSAC 7 cut(s) 71, 682, 712, 742, 772, 853, 922
NspI RCATGY 1 cut(s) 1403
NspV TTCGAA 2 cut(s) 1049, 1103
PciI ACATGT 1 cut(s) 1399
PfeI GAWTC 7 cut(s) 53, 662, 692, 722, 812, 1105, 1262
PinAI ACCGGT 1 cut(s) 107
PkrI GCNGC 8 cut(s) 122, 131, 249, 412, 1251, 1273, 1582, 1624
PleI GAGTC 6 cut(s) 468, 679, 709, 904, 1487, 1567
PpsI GAGTC 6 cut(s) 468, 679, 709, 904, 1487, 1567
PscI ACATGT 1 cut(s) 1399
PshBI ATTAAT 1 cut(s) 1542
Psp6I CCWGG 3 cut(s) 21, 81, 226
PspGI CCWGG 3 cut(s) 21, 81, 226
PspN4I GGNNCC 4 cut(s) 139, 192, 232, 1257
PspPI GGNCC 6 cut(s) 16, 25, 191, 230, 644, 1255
PstI CTGCAG 2 cut(s) 751, 781
PsuI RGATCY 1 cut(s) 865
PvuII CAGCTG 2 cut(s) 374, 1622
RseI CAYNNNNRTG 4 cut(s) 399, 441, 594, 600
SacII CCGCGG 1 cut(s) 133
SaqAI TTAA 7 cut(s) 462, 819, 1335, 1413, 1449, 1542, 1551
SatI GCNGC 8 cut(s) 121, 130, 248, 411, 1250, 1272, 1581, 1623
Sau3AI GATC 7 cut(s) 581, 865, 1111, 1144, 1176, 1279, 1572
Sau96I GGNCC 6 cut(s) 16, 25, 191, 230, 644, 1255
SchI GAGTC 6 cut(s) 468, 679, 709, 904, 1487, 1568
ScrFI CCNGG 4 cut(s) 23, 83, 228, 1019
SfaNI GCATC 4 cut(s) 391, 445, 862, 981
SfcI CTRYAG 4 cut(s) 181, 657, 747, 777
Sfr303I CCGCGG 1 cut(s) 133
SfuI TTCGAA 2 cut(s) 1049, 1103
SgrBI CCGCGG 1 cut(s) 133
SinI GGWCC 4 cut(s) 16, 25, 230, 1255
SmiMI CAYNNNNRTG 4 cut(s) 399, 441, 594, 600
SmlI CTYRAG 1 cut(s) 1412
SmoI CTYRAG 1 cut(s) 1412
Sse9I AATT 3 cut(s) 459, 520, 1336
SsiI CCGC 5 cut(s) 19, 120, 130, 132, 153
SspMI CTAG 3 cut(s) 407, 560, 1511
StyD4I CCNGG 4 cut(s) 21, 81, 226, 1017
TaaI ACNGT 1 cut(s) 853
TaiI ACGT 1 cut(s) 948
TaqI TCGA 7 cut(s) 36, 417, 960, 1049, 1103, 1538, 1562
TasI AATT 3 cut(s) 459, 520, 1336
TauI GCSGC 2 cut(s) 123, 132
TfiI GAWTC 7 cut(s) 53, 662, 692, 722, 812, 1105, 1262
Tru1I TTAA 7 cut(s) 462, 819, 1335, 1413, 1449, 1542, 1551
Tru9I TTAA 7 cut(s) 462, 819, 1335, 1413, 1449, 1542, 1551
TscAI CASTG 2 cut(s) 927, 1251
TseFI GTSAC 7 cut(s) 71, 682, 712, 742, 772, 853, 922
TseI GCWGC 6 cut(s) 247, 410, 1249, 1271, 1580, 1622
Tsp45I GTSAC 7 cut(s) 71, 682, 712, 742, 772, 853, 922
TspDTI ATGAA 3 cut(s) 182, 287, 578
TspRI CASTG 2 cut(s) 927, 1251
Vha464I CTTAAG 1 cut(s) 1412
VpaK11BI GGWCC 4 cut(s) 16, 25, 230, 1255
VspI ATTAAT 1 cut(s) 1542
XapI RAATTY 1 cut(s) 520
XceI RCATGY 1 cut(s) 1403
XmiI GTMKAC 1 cut(s) 1161
XspI CTAG 3 cut(s) 407, 560, 1511
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.