Rmu_sc0012726.1_g000002

Phosphoribosylaminoimidazole-succinocarboxamide synthase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012726.1
Physical Location & Seq
Reverse (-)
7194 .. 13015
5822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012726.1_g000002.1.cds

Sequence Viewer

Length: 1584 bp
atggcgactcagtatacccgaacgttaaaccctcccaaaaccctcatccccaagctcccaaatctcaacccctctttgtcctccttcaaaaccccaaaacccaaatccaaaagcttcccaacactctctgtctcggccatggtggcccaaaatcaacctcctctggatgctctgctcaacagtgctcgcaaacaagaggtgcttggcgccattgggacttccttgtctaattgtctttctgaaaccaacctccacctcacagttcctggcctgaaatccaaaaccagaggcaaggttagggatgtttacgacagtggggattatctagttatggtcaccacggatcggcagagtgcatttgatagaattcttgcttccattccctttaaaggccaggtccttaatgaaacaagttcatggtggtttgacaaaactcaacatataacatcaaatgctgttgtatcggttccagatgaaaatgtaacaattgcgaagaaatgttctgtttttccggtggagtttgtggtaagaggttttgtgactggaagtactgatacatcattatggacggtctacagaagtggcgttcgaaattactgtggcaatgcacttccagacggcttggtaaaaagccaaaagcttcctgcaaatatactcacaccaacaactaaggctgcagatcatgatgttcctgttactccagatgagataattgaacatggattgatgagtcgagccgattatgatgaagtaagtcggaaagcattaagcttgtttgagtatggacagcgtgtggctttggagcatgggttgatattggtagacacaaagtatgaatttggaaagggactggatggttccatacatttgattgatgaggtgcatacacctgattcaagcagatattggattgcacatacttatgaggaacgttttcagaatggtcttgaacctgagaatgttgacaaggagttcttgaggttgtggtttaaagatcattgcaatccatatgaagatgaggtcctccctgatgcccctgaagaacttgttcgtgaactatcttggcgatatattttcttgtatgagacaattacaaaatcaaaattcaagatgccttcaacagaggagccaatacatgatcgaatatctcgcaatgtggcacaagcactgtcatctcttgaagttgttgggttgctgggcaagcccttctgccctaagagtcacatggactttgaagctgaaggagatcgagtacgaataccagttcttgtgcatggtggtaagcctttagcagagttgctggttatacttgaataccttgaccagacttggaagcaaaatccaatcctgccagaagatccctatgaaagagctcaggcgcgcttctggtccagatttgtcgacgagaagtgtgtgccagcgatgatgactgcattcacaaagataggggaagagaaagagaaagagaaagctgcaaaagaagatagagagaatctcaagattctggaaagtggacttggggaaaagcaatcctttggaggtgaaagcacagggctttgtggacatagctgctgggtggattag

Protein Analysis

527

Amino Acids

59.24

Weight (kDa)

5.73

Isoelectric Point (pI)

31.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 223
AccB1I GGYRCC 1 cut(s) 206
AccI GTMKAC 4 cut(s) 14, 573, 822, 1401
AccII CGCG 1 cut(s) 1381
AclI AACGTT 2 cut(s) 23, 931
AclWI GGATC 2 cut(s) 351, 1352
AcoI YGGCCR 1 cut(s) 135
AcsI RAATTY 3 cut(s) 366, 836, 1103
AcuI CTGAAG 2 cut(s) 1059, 1260
AcyI GRCGYC 1 cut(s) 207
AfaI GTAC 2 cut(s) 550, 1254
AfiI CCNNNNNNNGG 2 cut(s) 345, 389
AgsI TTSAA 9 cut(s) 88, 716, 897, 950, 1108, 1119, 1181, 1235, 1313
AjnI CCWGG 2 cut(s) 265, 393
AjuI GAANNNNNNNTTGG 2 cut(s) 1500, 1532
AluBI AGCT 8 cut(s) 55, 114, 640, 771, 1238, 1373, 1472, 1569
AluI AGCT 8 cut(s) 55, 114, 640, 771, 1238, 1373, 1472, 1569
Alw21I GWGCWC 2 cut(s) 187, 1375
Alw26I GTCTC 2 cut(s) 136, 1079
AlwI GGATC 2 cut(s) 351, 1352
AlwNI CAGNNNCTG 1 cut(s) 266
AoxI GGCC 4 cut(s) 135, 144, 268, 391
ApeKI GCWGC 3 cut(s) 674, 1472, 1569
ApoI RAATTY 3 cut(s) 366, 836, 1103
Asp700I GAANNNNTTC 2 cut(s) 933, 1047
AspLEI GCGC 3 cut(s) 209, 1381, 1383
AspS9I GGNCC 4 cut(s) 145, 397, 1021, 1389
AsuHPI GGTGA 2 cut(s) 328, 1553
AsuII TTCGAA 1 cut(s) 589
AvaII GGWCC 3 cut(s) 397, 1021, 1389
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 1 cut(s) 1375
BarI GAAGNNNNNNTAC 2 cut(s) 538, 570
Bbv12I GWGCWC 2 cut(s) 187, 1375
BbvI GCAGC 3 cut(s) 661, 1459, 1556
BccI CCATC 1 cut(s) 848
BceAI ACGGC 1 cut(s) 634
BciT130I CCWGG 2 cut(s) 267, 395
BcoDI GTCTC 2 cut(s) 136, 1079
BfaI CTAG 1 cut(s) 326
BfmI CTRYAG 2 cut(s) 574, 675
BfoI RGCGCY 1 cut(s) 210
BglI GCCNNNNNGGC 1 cut(s) 143
BisI GCNGC 3 cut(s) 675, 1473, 1570
BlsI GCNGC 3 cut(s) 676, 1474, 1571
BmcAI AGTACT 1 cut(s) 550
Bme1390I CCNGG 2 cut(s) 267, 395
Bme18I GGWCC 3 cut(s) 397, 1021, 1389
BmgT120I GGNCC 4 cut(s) 145, 397, 1021, 1389
BmiI GGNNCC 4 cut(s) 208, 468, 859, 1128
BmrFI CCNGG 2 cut(s) 267, 395
BmsI GCATC 3 cut(s) 157, 1021, 1101
BplI GAGNNNNNCTC 2 cut(s) 1479, 1511
BpmI CTGGAG 1 cut(s) 684
Bpu10I CCTNAGC 1 cut(s) 1374
Bpu14I TTCGAA 1 cut(s) 589
BpuEI CTTGAG 2 cut(s) 997, 1481
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 2 cut(s) 138, 339
BsaWI WCCGGW 1 cut(s) 511
BsaXI ACNNNNNCTCC 4 cut(s) 794, 824, 1236, 1266
Bsc4I CCNNNNNNNGG 2 cut(s) 345, 389
Bse1I ACTGG 3 cut(s) 547, 855, 1262
Bse3DI GCAATG 3 cut(s) 610, 997, 1159
BseBI CCWGG 2 cut(s) 267, 395
BseDI CCNNGG 2 cut(s) 138, 339
BseGI GGATG 4 cut(s) 45, 172, 307, 859
BseLI CCNNNNNNNGG 2 cut(s) 345, 389
BseMI GCAATG 3 cut(s) 610, 997, 1159
BseMII CTCAG 3 cut(s) 23, 945, 1388
BseNI ACTGG 3 cut(s) 547, 855, 1262
BsePI GCGCGC 1 cut(s) 1379
BseRI GAGGAG 2 cut(s) 150, 1139
BseXI GCAGC 3 cut(s) 661, 1459, 1556
BseYI CCCAGC 2 cut(s) 1195, 1572
Bsh1236I CGCG 1 cut(s) 1381
BshFI GGCC 4 cut(s) 137, 146, 270, 393
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 2 cut(s) 187, 1375
BsiSI CCGG 1 cut(s) 512
BslFI GGGAC 2 cut(s) 229, 861
BslI CCNNNNNNNGG 2 cut(s) 345, 389
BsmAI GTCTC 2 cut(s) 136, 1079
BsmFI GGGAC 2 cut(s) 229, 861
BsmI GAATGC 1 cut(s) 1433
BsnI GGCC 4 cut(s) 137, 146, 270, 393
Bsp119I TTCGAA 1 cut(s) 589
Bsp1286I GDGCHC 2 cut(s) 187, 1375
Bsp143I GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
Bsp19I CCATGG 1 cut(s) 138
BspANI GGCC 4 cut(s) 137, 146, 270, 393
BspCNI CTCAG 3 cut(s) 22, 946, 1387
BspFNI CGCG 1 cut(s) 1381
BspHI TCATGA 1 cut(s) 682
BspLI GGNNCC 4 cut(s) 208, 468, 859, 1128
BspMAI CTGCAG 1 cut(s) 679
BspPI GGATC 2 cut(s) 351, 1352
BspT104I TTCGAA 1 cut(s) 589
BspT107I GGYRCC 1 cut(s) 206
BsrDI GCAATG 3 cut(s) 610, 997, 1159
BsrI ACTGG 3 cut(s) 547, 855, 1262
BssECI CCNNGG 2 cut(s) 138, 339
BssHII GCGCGC 1 cut(s) 1379
BssMI GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
BssNAI GTATAC 1 cut(s) 15
BssNI GRCGYC 1 cut(s) 207
BssT1I CCWWGG 1 cut(s) 138
Bst1107I GTATAC 1 cut(s) 15
Bst2UI CCWGG 2 cut(s) 267, 395
Bst4CI ACNGT 6 cut(s) 182, 262, 314, 571, 599, 1170
Bst6I CTCTTC 1 cut(s) 1446
BstACI GRCGYC 1 cut(s) 207
BstBI TTCGAA 1 cut(s) 589
BstC8I GCNNGC 4 cut(s) 187, 1202, 1381, 1419
BstDEI CTNAG 5 cut(s) 9, 669, 954, 1215, 1374
BstDSI CCRYGG 2 cut(s) 138, 339
BstEII GGTNACC 1 cut(s) 334
BstF5I GGATG 4 cut(s) 45, 172, 307, 859
BstFNI CGCG 1 cut(s) 1381
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 3 cut(s) 209, 1381, 1383
BstKTI GATC 6 cut(s) 346, 682, 997, 1141, 1249, 1360
BstMAI GTCTC 2 cut(s) 136, 1079
BstMBI GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
BstMWI GCNNNNNNNGC 2 cut(s) 143, 1201
BstNI CCWGG 2 cut(s) 267, 395
BstPI GGTNACC 1 cut(s) 334
BstSCI CCNGG 2 cut(s) 265, 393
BstSFI CTRYAG 2 cut(s) 574, 675
BstUI CGCG 1 cut(s) 1381
BstV1I GCAGC 3 cut(s) 661, 1459, 1556
BstX2I RGATCY 1 cut(s) 1357
BstYI RGATCY 1 cut(s) 1357
BstZ17I GTATAC 1 cut(s) 15
BsuRI GGCC 4 cut(s) 137, 146, 270, 393
BtgI CCRYGG 2 cut(s) 138, 339
BtgZI GCGATG 1 cut(s) 1436
BtsCI GGATG 4 cut(s) 45, 172, 307, 859
BtsIMutI CAGTG 3 cut(s) 187, 319, 1166
Cac8I GCNNGC 4 cut(s) 187, 1202, 1381, 1419
CaiI CAGNNNCTG 1 cut(s) 266
CciI TCATGA 1 cut(s) 682
CfoI GCGC 3 cut(s) 209, 1381, 1383
Cfr13I GGNCC 4 cut(s) 145, 397, 1021, 1389
Csp6I GTAC 2 cut(s) 549, 1253
CviAII CATG 8 cut(s) 139, 417, 683, 719, 806, 1136, 1225, 1274
CviQI GTAC 2 cut(s) 549, 1253
DdeI CTNAG 5 cut(s) 9, 669, 954, 1215, 1374
DinI GGCGCC 1 cut(s) 208
DpnI GATC 6 cut(s) 345, 681, 996, 1140, 1248, 1359
DpnII GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
DraI TTTAAA 2 cut(s) 388, 991
DrdI GACNNNNNNGTC 1 cut(s) 223
DseDI GACNNNNNNGTC 1 cut(s) 223
EaeI YGGCCR 1 cut(s) 135
Eam1104I CTCTTC 1 cut(s) 1446
EarI CTCTTC 1 cut(s) 1446
Ecl136II GAGCTC 1 cut(s) 1373
Eco130I CCWWGG 1 cut(s) 138
Eco24I GRGCYC 1 cut(s) 1375
Eco47I GGWCC 3 cut(s) 397, 1021, 1389
Eco53kI GAGCTC 1 cut(s) 1373
Eco57I CTGAAG 2 cut(s) 1059, 1260
Eco91I GGTNACC 1 cut(s) 334
EcoICRI GAGCTC 1 cut(s) 1373
EcoO109I RGGNCCY 2 cut(s) 397, 1021
EcoO65I GGTNACC 1 cut(s) 334
EcoRI GAATTC 1 cut(s) 366
EcoRII CCWGG 2 cut(s) 265, 393
EcoT14I CCWWGG 1 cut(s) 138
EcoT38I GRGCYC 1 cut(s) 1375
EgeI GGCGCC 1 cut(s) 208
EheI GGCGCC 1 cut(s) 208
ErhI CCWWGG 1 cut(s) 138
FaeI CATG 8 cut(s) 142, 420, 686, 722, 809, 1139, 1228, 1277
FalI AAGNNNNNCTT 6 cut(s) 186, 218, 959, 991, 1517, 1549
FaqI GGGAC 2 cut(s) 229, 861
FatI CATG 8 cut(s) 138, 416, 682, 718, 805, 1135, 1224, 1273
FauNDI CATATG 1 cut(s) 1009
FblI GTMKAC 4 cut(s) 14, 573, 822, 1401
Fnu4HI GCNGC 3 cut(s) 675, 1473, 1570
FokI GGATG 4 cut(s) 32, 179, 314, 866
FriOI GRGCYC 1 cut(s) 1375
Fsp4HI GCNGC 3 cut(s) 675, 1473, 1570
FspBI CTAG 1 cut(s) 326
GlaI GCGC 3 cut(s) 208, 1380, 1382
GluI GCNGC 3 cut(s) 675, 1473, 1570
GsaI CCCAGC 2 cut(s) 1199, 1576
GsuI CTGGAG 1 cut(s) 684
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 4 cut(s) 137, 146, 270, 393
HapII CCGG 1 cut(s) 512
HhaI GCGC 3 cut(s) 209, 1381, 1383
Hin1I GRCGYC 1 cut(s) 207
Hin1II CATG 8 cut(s) 142, 420, 686, 722, 809, 1139, 1228, 1277
Hin6I GCGC 3 cut(s) 207, 1379, 1381
HinP1I GCGC 3 cut(s) 207, 1379, 1381
HincII GTYRAC 2 cut(s) 964, 1402
HindII GTYRAC 2 cut(s) 964, 1402
HindIII AAGCTT 3 cut(s) 112, 638, 769
HinfI GANTC 6 cut(s) 7, 730, 893, 1219, 1492, 1501
HpaII CCGG 1 cut(s) 512
HphI GGTGA 2 cut(s) 328, 1553
Hpy166II GTNNAC 9 cut(s) 15, 307, 574, 823, 964, 1055, 1402, 1514, 1562
Hpy188I TCNGA 3 cut(s) 241, 759, 939
Hpy8I GTNNAC 9 cut(s) 15, 307, 574, 823, 964, 1055, 1402, 1514, 1562
Hpy99I CGWCG 1 cut(s) 1406
HpyAV CCTTC 4 cut(s) 94, 1125, 1216, 1235
HpyCH4III ACNGT 6 cut(s) 182, 262, 314, 571, 599, 1170
HpyCH4IV ACGT 2 cut(s) 23, 931
HpyF10VI GCNNNNNNNGC 2 cut(s) 143, 1201
HpyF3I CTNAG 5 cut(s) 9, 669, 954, 1215, 1374
HpySE526I ACGT 2 cut(s) 23, 931
Hsp92I GRCGYC 1 cut(s) 207
Hsp92II CATG 8 cut(s) 142, 420, 686, 722, 809, 1139, 1228, 1277
HspAI GCGC 3 cut(s) 207, 1379, 1381
KasI GGCGCC 1 cut(s) 206
Kzo9I GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
LmnI GCTCC 3 cut(s) 60, 802, 1126
Lsp1109I GCAGC 3 cut(s) 661, 1459, 1556
LweI GCATC 3 cut(s) 157, 1021, 1101
MaeI CTAG 1 cut(s) 326
MaeII ACGT 2 cut(s) 23, 931
MaeIII GTNAC 5 cut(s) 334, 481, 538, 694, 1220
MalI GATC 6 cut(s) 345, 681, 996, 1140, 1248, 1359
MboI GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
MboII GAAGA 6 cut(s) 505, 1025, 1052, 1367, 1463, 1493
MfeI CAATTG 1 cut(s) 486
MflI RGATCY 1 cut(s) 1357
MhlI GDGCHC 2 cut(s) 187, 1375
MluCI AATT 8 cut(s) 229, 366, 486, 592, 711, 836, 1089, 1103
Mly113I GGCGCC 1 cut(s) 207
MlyI GAGTC 2 cut(s) 739, 1228
MmeI TCCRAC 1 cut(s) 737
MroXI GAANNNNTTC 2 cut(s) 933, 1047
MseI TTAA 5 cut(s) 26, 387, 402, 767, 990
MslI CAYNNNNRTG 2 cut(s) 562, 921
MspI CCGG 1 cut(s) 512
MspR9I CCNGG 2 cut(s) 267, 395
MunI CAATTG 1 cut(s) 486
Mva1269I GAATGC 1 cut(s) 1433
MvaI CCWGG 2 cut(s) 267, 395
MvnI CGCG 1 cut(s) 1381
MwoI GCNNNNNNNGC 2 cut(s) 143, 1201
NarI GGCGCC 1 cut(s) 207
NcoI CCATGG 1 cut(s) 138
NdeI CATATG 1 cut(s) 1009
NdeII GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
NlaIII CATG 8 cut(s) 142, 420, 686, 722, 809, 1139, 1228, 1277
NlaIV GGNNCC 4 cut(s) 208, 468, 859, 1128
NmeAIII GCCGAG 1 cut(s) 113
NmuCI GTSAC 3 cut(s) 334, 538, 1220
NspV TTCGAA 1 cut(s) 589
PagI TCATGA 1 cut(s) 682
PauI GCGCGC 1 cut(s) 1379
PctI GAATGC 1 cut(s) 1433
PdmI GAANNNNTTC 2 cut(s) 933, 1047
PfeI GAWTC 3 cut(s) 893, 1492, 1501
PkrI GCNGC 3 cut(s) 676, 1474, 1571
PleI GAGTC 2 cut(s) 738, 1227
PluTI GGCGCC 1 cut(s) 210
PpsI GAGTC 2 cut(s) 738, 1227
PpuMI RGGWCCY 2 cut(s) 397, 1021
Psp124BI GAGCTC 1 cut(s) 1375
Psp1406I AACGTT 2 cut(s) 23, 931
Psp5II RGGWCCY 2 cut(s) 397, 1021
Psp6I CCWGG 2 cut(s) 265, 393
PspEI GGTNACC 1 cut(s) 334
PspFI CCCAGC 2 cut(s) 1195, 1572
PspGI CCWGG 2 cut(s) 265, 393
PspN4I GGNNCC 4 cut(s) 208, 468, 859, 1128
PspPI GGNCC 4 cut(s) 145, 397, 1021, 1389
PspPPI RGGWCCY 2 cut(s) 397, 1021
PstI CTGCAG 1 cut(s) 679
PstNI CAGNNNCTG 1 cut(s) 266
PsuI RGATCY 1 cut(s) 1357
PteI GCGCGC 1 cut(s) 1379
RsaI GTAC 2 cut(s) 550, 1254
RsaNI GTAC 2 cut(s) 549, 1253
RseI CAYNNNNRTG 2 cut(s) 562, 921
SacI GAGCTC 1 cut(s) 1375
SalI GTCGAC 1 cut(s) 1400
SaqAI TTAA 5 cut(s) 26, 387, 402, 767, 990
SatI GCNGC 3 cut(s) 675, 1473, 1570
Sau3AI GATC 6 cut(s) 343, 679, 994, 1138, 1246, 1357
Sau96I GGNCC 4 cut(s) 145, 397, 1021, 1389
ScaI AGTACT 1 cut(s) 550
SchI GAGTC 2 cut(s) 739, 1228
ScrFI CCNGG 2 cut(s) 267, 395
SduI GDGCHC 2 cut(s) 187, 1375
SfaNI GCATC 3 cut(s) 157, 1021, 1101
SfcI CTRYAG 2 cut(s) 574, 675
SfiI GGCCNNNNNGGCC 1 cut(s) 143
SfoI GGCGCC 1 cut(s) 208
SfuI TTCGAA 1 cut(s) 589
SinI GGWCC 3 cut(s) 397, 1021, 1389
SmiMI CAYNNNNRTG 2 cut(s) 562, 921
SmlI CTYRAG 2 cut(s) 976, 1496
SmoI CTYRAG 2 cut(s) 976, 1496
Sse9I AATT 8 cut(s) 229, 366, 486, 592, 711, 836, 1089, 1103
SspDI GGCGCC 1 cut(s) 206
SspMI CTAG 1 cut(s) 326
SstI GAGCTC 1 cut(s) 1375
StyD4I CCNGG 2 cut(s) 265, 393
StyI CCWWGG 1 cut(s) 138
TaaI ACNGT 6 cut(s) 182, 262, 314, 571, 599, 1170
TaiI ACGT 2 cut(s) 26, 934
TaqI TCGA 5 cut(s) 589, 733, 1141, 1249, 1401
TasI AATT 8 cut(s) 229, 366, 486, 592, 711, 836, 1089, 1103
TatI WGTACW 1 cut(s) 548
TfiI GAWTC 3 cut(s) 893, 1492, 1501
Tru1I TTAA 5 cut(s) 26, 387, 402, 767, 990
Tru9I TTAA 5 cut(s) 26, 387, 402, 767, 990
TscAI CASTG 3 cut(s) 187, 319, 1173
TseFI GTSAC 3 cut(s) 334, 538, 1220
TseI GCWGC 3 cut(s) 674, 1472, 1569
Tsp45I GTSAC 3 cut(s) 334, 538, 1220
TspDTI ATGAA 7 cut(s) 405, 420, 489, 762, 849, 1026, 1380
TspGWI ACGGA 1 cut(s) 356
TspRI CASTG 3 cut(s) 187, 319, 1173
VpaK11BI GGWCC 3 cut(s) 397, 1021, 1389
XapI RAATTY 3 cut(s) 366, 836, 1103
XmiI GTMKAC 4 cut(s) 14, 573, 822, 1401
XmnI GAANNNNTTC 2 cut(s) 933, 1047
XspI CTAG 1 cut(s) 326
ZrmI AGTACT 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.