Rmu_sc0013510.1_g000004

2-alkenal reductase (NADP( )-dependent)-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013510.1
Physical Location & Seq
Reverse (-)
34430 .. 35342
913 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013510.1_g000004.1.cds

Sequence Viewer

Length: 468 bp
atgcaggtaaggctcataaaggaggaatttggatatgatgatgcattcaactatcacacggagacagattatgatgctgctctaagcaagtatttccctaatggaattgatgtataccttgataatgttggtggtgaaatgcttgaggctgttctcaaccacgtcaaccaacacgcaaagatacctctttgtggcatgatatctggctacaacaaggtttggactgagagagagggagtgaggaatctgctaaatttgataggaaaagatgtgaagatgcaaggtttcatggtgggttcatacttggatcgttttggggattttgcaaaggagatggagagccacctaaaggaacgaaaaattaattctaagcttaaaatctataatggaattgacaagttcttggagagcctacggtcactcttcaccagctctaatatcggaaaagtggttatccaagtcaagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

155

Amino Acids

17.77

Weight (kDa)

6.42

Isoelectric Point (pI)

17.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 114
AclWI GGATC 1 cut(s) 315
AcsI RAATTY 2 cut(s) 26, 253
AfiI CCNNNNNNNGG 2 cut(s) 191, 349
AgsI TTSAA 1 cut(s) 49
AjiI CACGTC 1 cut(s) 163
AluBI AGCT 2 cut(s) 373, 432
AluI AGCT 2 cut(s) 373, 432
Alw26I GTCTC 1 cut(s) 56
AlwI GGATC 1 cut(s) 315
ApeKI GCWGC 1 cut(s) 77
ApoI RAATTY 2 cut(s) 26, 253
AseI ATTAAT 1 cut(s) 363
AsuHPI GGTGA 2 cut(s) 146, 418
BbvI GCAGC 1 cut(s) 64
BccI CCATC 1 cut(s) 328
BcoDI GTCTC 1 cut(s) 56
BisI GCNGC 1 cut(s) 78
BlsI GCNGC 1 cut(s) 79
BmgBI CACGTC 1 cut(s) 163
BmsI GCATC 3 cut(s) 31, 64, 267
BpuEI CTTGAG 1 cut(s) 164
Bsc4I CCNNNNNNNGG 2 cut(s) 191, 349
BseLI CCNNNNNNNGG 2 cut(s) 191, 349
BseMII CTCAG 1 cut(s) 216
BseXI GCAGC 1 cut(s) 64
BslI CCNNNNNNNGG 2 cut(s) 191, 349
BsmAI GTCTC 1 cut(s) 56
BsmI GAATGC 1 cut(s) 44
Bsp143I GATC 1 cut(s) 307
BspCNI CTCAG 1 cut(s) 217
BspPI GGATC 1 cut(s) 315
BssMI GATC 1 cut(s) 307
BssNAI GTATAC 1 cut(s) 115
Bst1107I GTATAC 1 cut(s) 115
Bst4CI ACNGT 1 cut(s) 417
Bst6I CTCTTC 1 cut(s) 428
BstDEI CTNAG 3 cut(s) 83, 225, 369
BstKTI GATC 1 cut(s) 310
BstMAI GTCTC 1 cut(s) 56
BstMBI GATC 1 cut(s) 307
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstV1I GCAGC 1 cut(s) 64
BstZ17I GTATAC 1 cut(s) 115
BtrI CACGTC 1 cut(s) 163
CviAII CATG 2 cut(s) 196, 289
CviJI RGCY 7 cut(s) 13, 149, 207, 342, 373, 411, 432
CviKI_1 RGCY 7 cut(s) 13, 149, 207, 342, 373, 411, 432
DdeI CTNAG 3 cut(s) 83, 225, 369
DpnI GATC 1 cut(s) 309
DpnII GATC 1 cut(s) 307
Eam1104I CTCTTC 1 cut(s) 428
EarI CTCTTC 1 cut(s) 428
Eco32I GATATC 1 cut(s) 201
EcoRV GATATC 1 cut(s) 201
EcoT22I ATGCAT 1 cut(s) 46
FaeI CATG 2 cut(s) 199, 292
FaiI YATR 8 cut(s) 17, 36, 72, 115, 197, 290, 301, 384
FatI CATG 2 cut(s) 195, 288
FblI GTMKAC 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 78
Fsp4HI GCNGC 1 cut(s) 78
GluI GCNGC 1 cut(s) 78
Hin1II CATG 2 cut(s) 199, 292
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HindIII AAGCTT 1 cut(s) 371
HinfI GANTC 1 cut(s) 244
HphI GGTGA 2 cut(s) 146, 418
Hpy166II GTNNAC 2 cut(s) 115, 166
Hpy188I TCNGA 1 cut(s) 443
Hpy8I GTNNAC 2 cut(s) 115, 166
HpyCH4III ACNGT 1 cut(s) 417
HpyCH4IV ACGT 1 cut(s) 162
HpyCH4V TGCA 4 cut(s) 4, 44, 280, 326
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 3 cut(s) 83, 225, 369
HpySE526I ACGT 1 cut(s) 162
Hsp92II CATG 2 cut(s) 199, 292
Kzo9I GATC 1 cut(s) 307
LpnPI CCDG 2 cut(s) 189, 442
Lsp1109I GCAGC 1 cut(s) 64
LweI GCATC 3 cut(s) 31, 64, 267
MaeII ACGT 1 cut(s) 162
MaeIII GTNAC 1 cut(s) 417
MalI GATC 1 cut(s) 309
MboI GATC 1 cut(s) 307
MboII GAAGA 2 cut(s) 286, 415
MluCI AATT 6 cut(s) 26, 105, 253, 360, 364, 390
MnlI CCTC 5 cut(s) 16, 139, 195, 226, 234
Mph1103I ATGCAT 1 cut(s) 46
MseI TTAA 2 cut(s) 363, 375
Mva1269I GAATGC 1 cut(s) 44
MwoI GCNNNNNNNGC 1 cut(s) 10
NdeII GATC 1 cut(s) 307
NlaIII CATG 2 cut(s) 199, 292
NmuCI GTSAC 1 cut(s) 417
NsiI ATGCAT 1 cut(s) 46
PctI GAATGC 1 cut(s) 44
PfeI GAWTC 1 cut(s) 244
PkrI GCNGC 1 cut(s) 79
PshBI ATTAAT 1 cut(s) 363
SaqAI TTAA 2 cut(s) 363, 375
SatI GCNGC 1 cut(s) 78
Sau3AI GATC 1 cut(s) 307
SetI ASST 9 cut(s) 9, 120, 165, 187, 219, 286, 348, 375, 434
SfaNI GCATC 3 cut(s) 31, 64, 267
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 6 cut(s) 26, 105, 253, 360, 364, 390
TaaI ACNGT 1 cut(s) 417
TaiI ACGT 1 cut(s) 165
TasI AATT 6 cut(s) 26, 105, 253, 360, 364, 390
TfiI GAWTC 1 cut(s) 244
Tru1I TTAA 2 cut(s) 363, 375
Tru9I TTAA 2 cut(s) 363, 375
TseFI GTSAC 1 cut(s) 417
TseI GCWGC 1 cut(s) 77
Tsp45I GTSAC 1 cut(s) 417
TspDTI ATGAA 2 cut(s) 277, 288
TspGWI ACGGA 1 cut(s) 74
VspI ATTAAT 1 cut(s) 363
XapI RAATTY 2 cut(s) 26, 253
XmiI GTMKAC 1 cut(s) 114
Zsp2I ATGCAT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.