Belongs to the SNF7 family
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.4G137000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0025941 RchiOBHm_Chr5g0025971 RchiOBHm_Chr5g0057141 RchiOBHm_Chr5g0057171 RchiOBHm_Chr5g0057201 RchiOBHm_Chr5g0057281 RchiOBHm_Chr5g0057311 RchiOBHm_Chr5g0057321 RchiOBHm_Chr5g0057381 |
| rosa_laevigata | RLG00000035151 |
| rosa_multiflora | Rmu_sc0001334.1_g000013 Rmu_sc0001334.1_g000026 |
| rosa_roxburghii | Rroxscaffold_1G00023040 Rroxscaffold_1G00023080 Rroxscaffold_1G00025370 Rroxscaffold_1G00053300 |
| rosa_rugosa | Rorug05G0305900 Rorug05G0306900 Rorug05G0306900 Rorug05G0307000 |
| rosa_samantha | Rh5BG386200 Rh5DG180600 Rh5DG400200 |
| rosa_wichuraiana | Rw5G035350 Rw5G035400 Rw5G035450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 234 |
| AciI | CCGC | 1 cut(s) | 306 |
| AclWI | GGATC | 1 cut(s) | 13 |
| AdeI | CACNNNGTG | 1 cut(s) | 53 |
| AfaI | GTAC | 1 cut(s) | 202 |
| AflIII | ACRYGT | 1 cut(s) | 232 |
| AgsI | TTSAA | 3 cut(s) | 23, 329, 380 |
| AluBI | AGCT | 5 cut(s) | 194, 209, 284, 317, 455 |
| AluI | AGCT | 5 cut(s) | 194, 209, 284, 317, 455 |
| Alw26I | GTCTC | 1 cut(s) | 425 |
| AlwI | GGATC | 1 cut(s) | 13 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 455 |
| ApeKI | GCWGC | 2 cut(s) | 191, 437 |
| AsuHPI | GGTGA | 2 cut(s) | 250, 440 |
| BbsI | GAAGAC | 1 cut(s) | 387 |
| BbvI | GCAGC | 2 cut(s) | 203, 424 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 348, 382 |
| BcoDI | GTCTC | 1 cut(s) | 425 |
| BfaI | CTAG | 1 cut(s) | 362 |
| BfmI | CTRYAG | 1 cut(s) | 172 |
| BisI | GCNGC | 2 cut(s) | 192, 438 |
| BlsI | GCNGC | 2 cut(s) | 193, 439 |
| BmcAI | AGTACT | 1 cut(s) | 202 |
| BmsI | GCATC | 1 cut(s) | 231 |
| BpiI | GAAGAC | 1 cut(s) | 387 |
| BpuEI | CTTGAG | 1 cut(s) | 112 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 306, 336 |
| Bse118I | RCCGGY | 1 cut(s) | 425 |
| BseRI | GAGGAG | 3 cut(s) | 324, 327, 407 |
| BseXI | GCAGC | 2 cut(s) | 203, 424 |
| BseYI | CCCAGC | 1 cut(s) | 317 |
| BsgI | GTGCAG | 1 cut(s) | 423 |
| Bsh1236I | CGCG | 1 cut(s) | 234 |
| BsiSI | CCGG | 1 cut(s) | 426 |
| BsmAI | GTCTC | 1 cut(s) | 425 |
| Bsp143I | GATC | 3 cut(s) | 5, 159, 333 |
| BspACI | CCGC | 1 cut(s) | 306 |
| BspFNI | CGCG | 1 cut(s) | 234 |
| BspHI | TCATGA | 1 cut(s) | 336 |
| BspPI | GGATC | 1 cut(s) | 13 |
| BsrFI | RCCGGY | 1 cut(s) | 425 |
| BssAI | RCCGGY | 1 cut(s) | 425 |
| BssMI | GATC | 3 cut(s) | 5, 159, 333 |
| Bst4CI | ACNGT | 2 cut(s) | 176, 185 |
| Bst6I | CTCTTC | 1 cut(s) | 324 |
| BstC8I | GCNNGC | 1 cut(s) | 232 |
| BstDEI | CTNAG | 1 cut(s) | 245 |
| BstFNI | CGCG | 1 cut(s) | 234 |
| BstKTI | GATC | 3 cut(s) | 8, 162, 336 |
| BstMAI | GTCTC | 1 cut(s) | 425 |
| BstMBI | GATC | 3 cut(s) | 5, 159, 333 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 116, 177 |
| BstSFI | CTRYAG | 1 cut(s) | 172 |
| BstUI | CGCG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 2 cut(s) | 203, 424 |
| BstV2I | GAAGAC | 1 cut(s) | 387 |
| BtsIMutI | CAGTG | 1 cut(s) | 181 |
| Cac8I | GCNNGC | 1 cut(s) | 232 |
| CaiI | CAGNNNCTG | 1 cut(s) | 455 |
| CciI | TCATGA | 1 cut(s) | 336 |
| Cfr10I | RCCGGY | 1 cut(s) | 425 |
| Csp6I | GTAC | 1 cut(s) | 201 |
| CviAII | CATG | 4 cut(s) | 70, 116, 265, 337 |
| CviQI | GTAC | 1 cut(s) | 201 |
| DdeI | CTNAG | 1 cut(s) | 245 |
| DpnI | GATC | 3 cut(s) | 7, 161, 335 |
| DpnII | GATC | 3 cut(s) | 5, 159, 333 |
| DraIII | CACNNNGTG | 1 cut(s) | 53 |
| Eam1104I | CTCTTC | 1 cut(s) | 324 |
| EarI | CTCTTC | 1 cut(s) | 324 |
| FaeI | CATG | 4 cut(s) | 73, 119, 268, 340 |
| FaiI | YATR | 9 cut(s) | 71, 117, 212, 266, 287, 302, 338, 345, 356 |
| FatI | CATG | 4 cut(s) | 69, 115, 264, 336 |
| Fnu4HI | GCNGC | 2 cut(s) | 192, 438 |
| Fsp4HI | GCNGC | 2 cut(s) | 192, 438 |
| FspBI | CTAG | 1 cut(s) | 362 |
| GluI | GCNGC | 2 cut(s) | 192, 438 |
| GsaI | CCCAGC | 1 cut(s) | 321 |
| HapII | CCGG | 1 cut(s) | 426 |
| Hin1II | CATG | 4 cut(s) | 73, 119, 268, 340 |
| HinfI | GANTC | 2 cut(s) | 78, 365 |
| HpaII | CCGG | 1 cut(s) | 426 |
| HphI | GGTGA | 2 cut(s) | 250, 440 |
| Hpy166II | GTNNAC | 1 cut(s) | 154 |
| Hpy188I | TCNGA | 1 cut(s) | 370 |
| Hpy188III | TCNNGA | 6 cut(s) | 30, 82, 337, 350, 449, 460 |
| Hpy8I | GTNNAC | 1 cut(s) | 154 |
| HpyCH4III | ACNGT | 2 cut(s) | 176, 185 |
| HpyCH4V | TGCA | 2 cut(s) | 191, 440 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 116, 177 |
| HpyF3I | CTNAG | 1 cut(s) | 245 |
| Hsp92II | CATG | 4 cut(s) | 73, 119, 268, 340 |
| Kzo9I | GATC | 3 cut(s) | 5, 159, 333 |
| LmnI | GCTCC | 3 cut(s) | 199, 314, 394 |
| LpnPI | CCDG | 4 cut(s) | 303, 439, 445, 462 |
| Lsp1109I | GCAGC | 2 cut(s) | 203, 424 |
| LweI | GCATC | 1 cut(s) | 231 |
| MaeI | CTAG | 1 cut(s) | 362 |
| MaeIII | GTNAC | 1 cut(s) | 277 |
| MalI | GATC | 3 cut(s) | 7, 161, 335 |
| MboI | GATC | 3 cut(s) | 5, 159, 333 |
| MboII | GAAGA | 3 cut(s) | 245, 341, 392 |
| MluCI | AATT | 2 cut(s) | 324, 340 |
| MluI | ACGCGT | 1 cut(s) | 232 |
| MlyI | GAGTC | 1 cut(s) | 359 |
| MnlI | CCTC | 4 cut(s) | 302, 305, 364, 385 |
| MslI | CAYNNNNRTG | 1 cut(s) | 263 |
| MspI | CCGG | 1 cut(s) | 426 |
| MvnI | CGCG | 1 cut(s) | 234 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 116, 177 |
| NdeII | GATC | 3 cut(s) | 5, 159, 333 |
| NlaIII | CATG | 4 cut(s) | 73, 119, 268, 340 |
| PagI | TCATGA | 1 cut(s) | 336 |
| PfeI | GAWTC | 1 cut(s) | 78 |
| PkrI | GCNGC | 2 cut(s) | 193, 439 |
| PleI | GAGTC | 1 cut(s) | 359 |
| PpsI | GAGTC | 1 cut(s) | 359 |
| PspFI | CCCAGC | 1 cut(s) | 317 |
| PstNI | CAGNNNCTG | 1 cut(s) | 455 |
| RsaI | GTAC | 1 cut(s) | 202 |
| RsaNI | GTAC | 1 cut(s) | 201 |
| RseI | CAYNNNNRTG | 1 cut(s) | 263 |
| SatI | GCNGC | 2 cut(s) | 192, 438 |
| Sau3AI | GATC | 3 cut(s) | 5, 159, 333 |
| ScaI | AGTACT | 1 cut(s) | 202 |
| SchI | GAGTC | 1 cut(s) | 359 |
| SetI | ASST | 7 cut(s) | 55, 196, 211, 286, 319, 411, 457 |
| SfaNI | GCATC | 1 cut(s) | 231 |
| SfcI | CTRYAG | 1 cut(s) | 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 263 |
| SmlI | CTYRAG | 1 cut(s) | 91 |
| SmoI | CTYRAG | 1 cut(s) | 91 |
| Sse9I | AATT | 2 cut(s) | 324, 340 |
| SsiI | CCGC | 1 cut(s) | 306 |
| SspMI | CTAG | 1 cut(s) | 362 |
| TaaI | ACNGT | 2 cut(s) | 176, 185 |
| TasI | AATT | 2 cut(s) | 324, 340 |
| TatI | WGTACW | 1 cut(s) | 200 |
| TfiI | GAWTC | 1 cut(s) | 78 |
| TscAI | CASTG | 1 cut(s) | 181 |
| TseI | GCWGC | 2 cut(s) | 191, 437 |
| TspDTI | ATGAA | 1 cut(s) | 353 |
| TspRI | CASTG | 1 cut(s) | 181 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 145, 271 |
| XspI | CTAG | 1 cut(s) | 362 |
| ZrmI | AGTACT | 1 cut(s) | 202 |