Rroxscaffold_4G00300020

UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
19948855 .. 19973185
24331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00300020.1

Sequence Viewer

Length: 1188 bp
ATGGAAAGCTGGTTTCAAGACGAAGAGATTGATATCAAATTCATGGCCATAGGTGGCCGGATGAAGTCGTGGCGACGCCGTGAAGCTAAGGCGGTGATTTCCACTGCTTGCACAAGAACACGTCATGCTGAAAATTATGACAATCAAGGGGAAATTCAAGAAATCTGTGATGCTCAGAATTCTAGCATAACCGCAGCTGAATCTGAAAGTATATTTTCCGGTTTGGACAAAGGTCATCAGATTAGATCAGAAAGGTGGAGAAAAGCTTTTGGACCAGCAGCGTCAAAAAAGAGCCAAACTTTGGCAAATGTTGCAGAGAAGTATTTGTTAGCATCTTTGAATGAAGATCCTAAACCAGGACATATAATACCTAATCTTGCAAATGCCTATTATATGAATGGTGATCATAGAAGTTCCGGCAAGTGCTTGGAGAAGGTGACAAAATTAGAGCTCATTGGATGTCTACACGATATGCTGTTGCAATACACCGAACCAAGGATACACCGCAGAATGGTATCGGGATCCCACCGAACAACTATCCTGGCAAGAAGTCAAATGGCTTCAGTTATAAGAGATGTAGACTCTATAATTTCCGTTCAACTTCACATACCATGGCCAGGCTTTGCCATGGTCCACAAAGCCCAACATGAGATTTCAGCAACATTTGATGATGTGAAACTTGGTGAGTTTGTAGAGCATGGCAAGGCGAACAAAGCCCAGTTGGTCTCCCCTCCTACTTTTGCCGGACCATCTTCTTTCTCTCGTGCTCACTTCAACCAGAGGAGACCACAAGCTCCTGCCACCGACACCACCGCACACCACCATCAATTGAATCAAAAACCGATTTTTCCGATCAAGAAAACTCAAACCTTAAAGCCGAGTAAGTTCAATCCATCTATCCGGTTGCCTTTTGGATCACTTCCAACTCGGCTTCGTCAACGCCCTCCCTTTCCCTCACCGGAGATAGCCGCCGCCATCGGAGGAGTCCATGAACCCCAAGGTTCCGAGGACGGACTCGAAGGCGACGACTTGTTCGCTTCACCGTTCAAGACAATGACACCAATGATGCGGGCATGCTCCGGGAGTAGTTACGGTTCTGCTGCTGTCTTGGTCTTTGGGAAAACAAGCATCGTCGGAGCTGTGGCTCCACATGATGCACAAGCCTTCGATCTCCGGGTTCCTACTTGA

Protein Analysis

395

Amino Acids

43.67

Weight (kDa)

9.19

Isoelectric Point (pI)

55.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 569
AccB7I CCANNNNNTGG 1 cut(s) 301
AccI GTMKAC 2 cut(s) 463, 579
AciI CCGC 7 cut(s) 92, 192, 505, 813, 969, 972, 1069
AclWI GGATC 4 cut(s) 341, 516, 529, 922
AcoI YGGCCR 3 cut(s) 45, 55, 614
AcsI RAATTY 3 cut(s) 38, 153, 178
AcuI CTGAAG 1 cut(s) 546
AcyI GRCGYC 1 cut(s) 76
AfiI CCNNNNNNNGG 5 cut(s) 301, 356, 495, 511, 617
AflIII ACRYGT 1 cut(s) 119
AgsI TTSAA 8 cut(s) 17, 158, 340, 599, 775, 832, 889, 1048
AjiI CACGTC 1 cut(s) 122
AjnI CCWGG 3 cut(s) 355, 540, 616
AluBI AGCT 7 cut(s) 9, 86, 197, 266, 451, 794, 1139
AluI AGCT 7 cut(s) 9, 86, 197, 266, 451, 794, 1139
Alw21I GWGCWC 2 cut(s) 453, 769
Alw26I GTCTC 2 cut(s) 730, 778
AlwI GGATC 4 cut(s) 341, 516, 529, 922
AoxI GGCC 3 cut(s) 45, 55, 614
ApeKI GCWGC 3 cut(s) 194, 278, 1100
ApoI RAATTY 3 cut(s) 38, 153, 178
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
AspS9I GGNCC 3 cut(s) 272, 631, 746
AsuC2I CCSGG 2 cut(s) 1081, 1175
AsuHPI GGTGA 6 cut(s) 106, 413, 448, 695, 948, 1032
AvaII GGWCC 3 cut(s) 272, 631, 746
BalI TGGCCA 2 cut(s) 47, 616
BamHI GGATCC 1 cut(s) 521
BanII GRGCYC 1 cut(s) 453
BauI CACGAG 1 cut(s) 762
Bbv12I GWGCWC 2 cut(s) 453, 769
BbvI GCAGC 3 cut(s) 206, 290, 1087
BccI CCATC 4 cut(s) 757, 831, 901, 983
BceAI ACGGC 1 cut(s) 63
BciT130I CCWGG 3 cut(s) 357, 542, 618
BciVI GTATCC 1 cut(s) 492
BclI TGATCA 1 cut(s) 403
BcnI CCSGG 2 cut(s) 1081, 1175
BcoDI GTCTC 2 cut(s) 730, 778
BfaI CTAG 1 cut(s) 183
BfuI GTATCC 1 cut(s) 492
BisI GCNGC 5 cut(s) 195, 279, 969, 972, 1101
BlsI GCNGC 5 cut(s) 196, 280, 970, 973, 1102
Bme1390I CCNGG 5 cut(s) 357, 542, 618, 1081, 1175
Bme18I GGWCC 3 cut(s) 272, 631, 746
BmgBI CACGTC 1 cut(s) 122
BmgT120I GGNCC 3 cut(s) 272, 631, 746
BmiI GGNNCC 4 cut(s) 523, 1003, 1146, 1179
BmrFI CCNGG 5 cut(s) 357, 542, 618, 1081, 1175
BmrI ACTGGG 1 cut(s) 712
BmsI GCATC 5 cut(s) 160, 341, 1056, 1137, 1144
BmuI ACTGGG 1 cut(s) 712
BoxI GACNNNNGTC 1 cut(s) 231
Bpu10I CCTNAGC 1 cut(s) 87
BpuMI CCSGG 2 cut(s) 1081, 1175
BsaBI GATNNNNATC 1 cut(s) 32
BsaHI GRCGYC 1 cut(s) 76
BsaI GGTCTC 2 cut(s) 730, 778
BsaJI CCNNGG 5 cut(s) 494, 611, 627, 997, 1005
BsaWI WCCGGW 3 cut(s) 218, 900, 958
Bsc4I CCNNNNNNNGG 5 cut(s) 301, 356, 495, 511, 617
Bse1I ACTGG 1 cut(s) 718
Bse8I GATNNNNATC 1 cut(s) 32
BseBI CCWGG 3 cut(s) 357, 542, 618
BseDI CCNNGG 5 cut(s) 494, 611, 627, 997, 1005
BseGI GGATG 2 cut(s) 66, 464
BseJI GATNNNNATC 1 cut(s) 32
BseLI CCNNNNNNNGG 5 cut(s) 301, 356, 495, 511, 617
BseMII CTCAG 1 cut(s) 188
BseNI ACTGG 1 cut(s) 718
BseRI GAGGAG 2 cut(s) 796, 996
BseXI GCAGC 3 cut(s) 206, 290, 1087
BshFI GGCC 3 cut(s) 47, 57, 616
BsiHKAI GWGCWC 2 cut(s) 453, 769
BsiSI CCGG 8 cut(s) 58, 219, 417, 744, 901, 959, 1080, 1174
BslI CCNNNNNNNGG 5 cut(s) 301, 356, 495, 511, 617
BsmAI GTCTC 2 cut(s) 730, 778
BsnI GGCC 3 cut(s) 47, 57, 616
Bso31I GGTCTC 2 cut(s) 730, 778
Bsp1286I GDGCHC 2 cut(s) 453, 769
Bsp143I GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
Bsp19I CCATGG 2 cut(s) 611, 627
BspACI CCGC 7 cut(s) 92, 192, 505, 813, 969, 972, 1069
BspANI GGCC 3 cut(s) 47, 57, 616
BspCNI CTCAG 1 cut(s) 187
BspLI GGNNCC 4 cut(s) 523, 1003, 1146, 1179
BspPI GGATC 4 cut(s) 341, 516, 529, 922
BspTNI GGTCTC 2 cut(s) 730, 778
BsrI ACTGG 1 cut(s) 718
BssECI CCNNGG 5 cut(s) 494, 611, 627, 997, 1005
BssMI GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
BssNI GRCGYC 1 cut(s) 76
BssSI CACGAG 1 cut(s) 762
BssT1I CCWWGG 4 cut(s) 494, 611, 627, 997
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 3 cut(s) 357, 542, 618
Bst4CI ACNGT 2 cut(s) 1044, 1094
Bst6I CTCTTC 1 cut(s) 18
BstACI GRCGYC 1 cut(s) 76
BstAPI GCANNNNNTGC 1 cut(s) 311
BstC8I GCNNGC 3 cut(s) 109, 1071, 1075
BstDEI CTNAG 2 cut(s) 87, 174
BstDSI CCRYGG 2 cut(s) 611, 627
BstENI CCTNNNNNAGG 1 cut(s) 354
BstF5I GGATG 2 cut(s) 66, 464
BstKTI GATC 7 cut(s) 248, 349, 406, 524, 855, 917, 1171
BstMAI GTCTC 2 cut(s) 730, 778
BstMBI GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
BstMWI GCNNNNNNNGC 2 cut(s) 311, 713
BstNI CCWGG 3 cut(s) 357, 542, 618
BstNSI RCATGY 1 cut(s) 1077
BstPAI GACNNNNGTC 1 cut(s) 231
BstSCI CCNGG 5 cut(s) 355, 540, 616, 1079, 1173
BstV1I GCAGC 3 cut(s) 206, 290, 1087
BstX2I RGATCY 2 cut(s) 346, 521
BstYI RGATCY 2 cut(s) 346, 521
BsuI GTATCC 1 cut(s) 492
BsuRI GGCC 3 cut(s) 47, 57, 616
BtgI CCRYGG 2 cut(s) 611, 627
BtrI CACGTC 1 cut(s) 122
BtsCI GGATG 2 cut(s) 66, 464
BtsI GCAGTG 1 cut(s) 102
BtsIMutI CAGTG 1 cut(s) 102
Cac8I GCNNGC 3 cut(s) 109, 1071, 1075
Cfr13I GGNCC 3 cut(s) 272, 631, 746
CseI GACGC 2 cut(s) 84, 270
CviAII CATG 9 cut(s) 43, 125, 612, 628, 647, 698, 989, 1074, 1151
DdeI CTNAG 2 cut(s) 87, 174
DpnI GATC 7 cut(s) 247, 348, 405, 523, 854, 916, 1170
DpnII GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
EaeI YGGCCR 3 cut(s) 45, 55, 614
Eam1104I CTCTTC 1 cut(s) 18
EarI CTCTTC 1 cut(s) 18
Ecl136II GAGCTC 1 cut(s) 451
Eco130I CCWWGG 4 cut(s) 494, 611, 627, 997
Eco24I GRGCYC 1 cut(s) 453
Eco31I GGTCTC 2 cut(s) 730, 778
Eco32I GATATC 1 cut(s) 34
Eco47I GGWCC 3 cut(s) 272, 631, 746
Eco53kI GAGCTC 1 cut(s) 451
Eco57I CTGAAG 1 cut(s) 546
EcoICRI GAGCTC 1 cut(s) 451
EcoNI CCTNNNNNAGG 1 cut(s) 354
EcoRI GAATTC 1 cut(s) 178
EcoRII CCWGG 3 cut(s) 355, 540, 616
EcoRV GATATC 1 cut(s) 34
EcoT14I CCWWGG 4 cut(s) 494, 611, 627, 997
EcoT38I GRGCYC 1 cut(s) 453
ErhI CCWWGG 4 cut(s) 494, 611, 627, 997
FaeI CATG 9 cut(s) 46, 128, 615, 631, 650, 701, 992, 1077, 1154
FatI CATG 9 cut(s) 42, 124, 611, 627, 646, 697, 988, 1073, 1150
FauI CCCGC 1 cut(s) 1062
FbaI TGATCA 1 cut(s) 403
FblI GTMKAC 2 cut(s) 463, 579
Fnu4HI GCNGC 5 cut(s) 195, 279, 969, 972, 1101
FokI GGATG 2 cut(s) 73, 471
FriOI GRGCYC 1 cut(s) 453
Fsp4HI GCNGC 5 cut(s) 195, 279, 969, 972, 1101
FspBI CTAG 1 cut(s) 183
GluI GCNGC 5 cut(s) 195, 279, 969, 972, 1101
HaeIII GGCC 3 cut(s) 47, 57, 616
HapII CCGG 8 cut(s) 58, 219, 417, 744, 901, 959, 1080, 1174
HgaI GACGC 2 cut(s) 84, 270
Hin1I GRCGYC 1 cut(s) 76
Hin1II CATG 9 cut(s) 46, 128, 615, 631, 650, 701, 992, 1077, 1154
HincII GTYRAC 1 cut(s) 938
HindII GTYRAC 1 cut(s) 938
HindIII AAGCTT 1 cut(s) 264
HinfI GANTC 5 cut(s) 200, 581, 832, 984, 1014
HpaII CCGG 8 cut(s) 58, 219, 417, 744, 901, 959, 1080, 1174
HphI GGTGA 6 cut(s) 106, 413, 448, 695, 948, 1032
Hpy166II GTNNAC 4 cut(s) 464, 580, 634, 938
Hpy188I TCNGA 8 cut(s) 177, 205, 240, 250, 852, 980, 1006, 1136
Hpy188III TCNNGA 5 cut(s) 17, 158, 519, 856, 1048
Hpy8I GTNNAC 4 cut(s) 464, 580, 634, 938
Hpy99I CGWCG 3 cut(s) 78, 1028, 1136
HpyAV CCTTC 3 cut(s) 427, 1013, 1174
HpyCH4III ACNGT 2 cut(s) 1044, 1094
HpyCH4IV ACGT 1 cut(s) 121
HpyCH4V TGCA 5 cut(s) 111, 314, 380, 481, 1157
HpyF10VI GCNNNNNNNGC 2 cut(s) 311, 713
HpyF3I CTNAG 2 cut(s) 87, 174
HpySE526I ACGT 1 cut(s) 121
Hsp92I GRCGYC 1 cut(s) 76
Hsp92II CATG 9 cut(s) 46, 128, 615, 631, 650, 701, 992, 1077, 1154
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
LmnI GCTCC 4 cut(s) 799, 1082, 1136, 1150
Lsp1109I GCAGC 3 cut(s) 206, 290, 1087
LweI GCATC 5 cut(s) 160, 341, 1056, 1137, 1144
MaeI CTAG 1 cut(s) 183
MaeII ACGT 1 cut(s) 121
MaeIII GTNAC 2 cut(s) 436, 1088
MalI GATC 7 cut(s) 247, 348, 405, 523, 854, 916, 1170
MboI GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
MboII GAAGA 3 cut(s) 35, 356, 744
MfeI CAATTG 1 cut(s) 827
MflI RGATCY 2 cut(s) 346, 521
MhlI GDGCHC 2 cut(s) 453, 769
MlsI TGGCCA 2 cut(s) 47, 616
MluCI AATT 7 cut(s) 38, 133, 153, 178, 443, 588, 827
MluNI TGGCCA 2 cut(s) 47, 616
MlyI GAGTC 3 cut(s) 575, 993, 1008
MmeI TCCRAC 2 cut(s) 947, 1114
MnlI CCTC 6 cut(s) 741, 774, 954, 964, 974, 1000
Mox20I TGGCCA 2 cut(s) 47, 616
MscI TGGCCA 2 cut(s) 47, 616
MseI TTAA 1 cut(s) 872
Msp20I TGGCCA 2 cut(s) 47, 616
MspA1I CMGCKG 1 cut(s) 197
MspI CCGG 8 cut(s) 58, 219, 417, 744, 901, 959, 1080, 1174
MspR9I CCNGG 5 cut(s) 357, 542, 618, 1081, 1175
MunI CAATTG 1 cut(s) 827
MvaI CCWGG 3 cut(s) 357, 542, 618
MwoI GCNNNNNNNGC 2 cut(s) 311, 713
NciI CCSGG 2 cut(s) 1081, 1175
NcoI CCATGG 2 cut(s) 611, 627
NdeII GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
NlaIII CATG 9 cut(s) 46, 128, 615, 631, 650, 701, 992, 1077, 1154
NlaIV GGNNCC 4 cut(s) 523, 1003, 1146, 1179
NmeAIII GCCGAG 2 cut(s) 903, 907
NmuCI GTSAC 1 cut(s) 436
NspI RCATGY 1 cut(s) 1077
PaeI GCATGC 1 cut(s) 1077
PcsI WCGNNNNNNNCGW 1 cut(s) 1023
PfeI GAWTC 2 cut(s) 200, 832
PflMI CCANNNNNTGG 1 cut(s) 301
PfoI TCCNGGA 1 cut(s) 1079
PkrI GCNGC 5 cut(s) 196, 280, 970, 973, 1102
PleI GAGTC 3 cut(s) 575, 992, 1008
PpsI GAGTC 3 cut(s) 575, 992, 1008
PshAI GACNNNNGTC 1 cut(s) 231
PsiI TTATAA 1 cut(s) 569
Psp124BI GAGCTC 1 cut(s) 453
Psp6I CCWGG 3 cut(s) 355, 540, 616
PspGI CCWGG 3 cut(s) 355, 540, 616
PspN4I GGNNCC 4 cut(s) 523, 1003, 1146, 1179
PspPI GGNCC 3 cut(s) 272, 631, 746
PsrI GAACNNNNNNTAC 4 cut(s) 483, 515, 1078, 1110
PsuI RGATCY 2 cut(s) 346, 521
PvuII CAGCTG 1 cut(s) 197
SacI GAGCTC 1 cut(s) 453
SaqAI TTAA 1 cut(s) 872
SatI GCNGC 5 cut(s) 195, 279, 969, 972, 1101
Sau3AI GATC 7 cut(s) 245, 346, 403, 521, 852, 914, 1168
Sau96I GGNCC 3 cut(s) 272, 631, 746
SchI GAGTC 3 cut(s) 575, 993, 1008
ScrFI CCNGG 5 cut(s) 357, 542, 618, 1081, 1175
SduI GDGCHC 2 cut(s) 453, 769
SfaNI GCATC 5 cut(s) 160, 341, 1056, 1137, 1144
SinI GGWCC 3 cut(s) 272, 631, 746
SphI GCATGC 1 cut(s) 1077
Sse9I AATT 7 cut(s) 38, 133, 153, 178, 443, 588, 827
SsiI CCGC 7 cut(s) 92, 192, 505, 813, 969, 972, 1069
SspMI CTAG 1 cut(s) 183
SstI GAGCTC 1 cut(s) 453
StyD4I CCNGG 5 cut(s) 355, 540, 616, 1079, 1173
StyI CCWWGG 4 cut(s) 494, 611, 627, 997
TaaI ACNGT 2 cut(s) 1044, 1094
TaiI ACGT 1 cut(s) 124
TaqI TCGA 2 cut(s) 1017, 1167
TasI AATT 7 cut(s) 38, 133, 153, 178, 443, 588, 827
TauI GCSGC 2 cut(s) 971, 974
TfiI GAWTC 2 cut(s) 200, 832
Tru1I TTAA 1 cut(s) 872
Tru9I TTAA 1 cut(s) 872
TscAI CASTG 1 cut(s) 109
TseFI GTSAC 1 cut(s) 436
TseI GCWGC 3 cut(s) 194, 278, 1100
Tsp45I GTSAC 1 cut(s) 436
TspDTI ATGAA 5 cut(s) 31, 77, 357, 410, 1005
TspGWI ACGGA 2 cut(s) 583, 1026
TspRI CASTG 1 cut(s) 109
Van91I CCANNNNNTGG 1 cut(s) 301
VpaK11BI GGWCC 3 cut(s) 272, 631, 746
XagI CCTNNNNNAGG 1 cut(s) 354
XapI RAATTY 3 cut(s) 38, 153, 178
XceI RCATGY 1 cut(s) 1077
XmiI GTMKAC 2 cut(s) 463, 579
XspI CTAG 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.